Citrus Sinensis ID: 022495

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290------
Protein Sequence
MATPLILRNCPTLCTLNSNQPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQR
Secondary Structure (PSIPRED)
ccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHccccEEEEEccccHHHHcccccccccEEEEEEcccccccHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccEEEccccccccccccHHHHHHHHHHHcccccccccEEEEEEccccHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccEEccccccEEEccccccccEEEEEEccccccccccccccccccccccccEEccccccccccccEEEEEEcccHHHHHHHHHHHHccccEEEEEccHHHHHHHcccHccccEEEEEEccccHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccEEEEEcccccccccccHHHHHHHHHHHHccHHHHccEEEEEccccccHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
matplilrncptlctlnsnqpplrtltltkhfsvsttktwshsinstkmgkseitEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKakttlskdnpslqiVKADVTEGSAKLSeaigddseaVVCAtgfqpgwdlfapwkAINLVEACRKRGVNRFILISSILVngaamgqilnPAYIFLNVFGLTLIAKLQAEQYIRKSginytiirpgglrnepptgniimetedtlyegtisRDQVAEVAVEALlhpessykVVEIISrvdapkrsyEDLFGSIKQR
Flexible Loop (DISEMBL)
matplilrncptlctlnsnqpplRTLTLTKHFSvsttktwshsinstkmgkSEITEEAeenvsvkqkkifvagatgssgkRIVEQLLAKGFAVKAGVRDLDKakttlskdnpslqivkADVTEGSAKLSeaigddseaVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGinytiirpgglrnepptgNIIMETEDTLYEGTISRDQVAEVAVEAllhpessykvveiisrvdapkrsyedlfgsikqr
Low Complexity Region (SEG)
MATPLILRNCPTLCTLNSNQPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQR
Disordered region (IsUnstruct)
****LILRNCPTLCTLNSNQPPLRTLTLTKHFSVSTTKTW***************************KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL*******************************IGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVD****************
Disordered Region (DISOPRED)
***P****NCPTLCTLN***************************************************IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA****SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIK**
Disordered Region (DISEMBL)
MATPLILRNCPTLCTLNSNQPPLRTLTLTKHF*******************************VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQR
Disordered Region (DISPRO)
*ATPLILRNCPTLCTLNSNQPPLRTLTLTKH*********************************KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIK**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATPLILRNCPTLCTLNSNQPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	296	2.2.26 [Sep-21-2011]
Q8H124	280	Uncharacterized protein A	yes	no	0.922	0.975	0.645	1e-107
Q8SKU2	534	Protein TIC 62, chloropla	N/A	no	0.787	0.436	0.371	1e-27
Q8H0U5	641	Protein TIC 62, chloropla	no	no	0.793	0.366	0.335	8e-24
Q04304	227	UPF0659 protein YMR090W O	yes	no	0.638	0.832	0.301	8e-11
O07609	214	Uncharacterized sugar epi	yes	no	0.608	0.841	0.320	5e-10
O80934	325	Uncharacterized protein A	no	no	0.706	0.643	0.280	2e-09
Q94EG6	253	Uncharacterized protein A	no	no	0.435	0.509	0.319	7e-08
Q3ZBE9	356	Sterol-4-alpha-carboxylat	yes	no	0.354	0.294	0.338	9e-06
P51238	319	Uncharacterized protein y	N/A	no	0.439	0.407	0.297	2e-05
Q9R1J0	362	Sterol-4-alpha-carboxylat	yes	no	0.402	0.328	0.303	0.0001

>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1

 Score =  389 bits (998), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/299 (64%), Positives = 237/299 (79%), Gaps = 26/299 (8%)

Query: 1   MATPLILRNCPTLCTLNSNQPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITEEAEE 60
           MAT L+LR+   +    S+       T  K F          S  S KM      E+ E 
Sbjct: 1   MATSLLLRHSSAVFFSQSS-----FFTKNKSF---------RSFTSIKM------EKGEA 40

Query: 61  NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKAD 120
             +VK KK+FVAGATG +GKRIVEQLL++GFAVKAGVRD++KAKT+  KD+PSLQIV+AD
Sbjct: 41  ENAVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSF-KDDPSLQIVRAD 99

Query: 121 VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-----INLVEACRKRGVNRFILI 175
           VTEG  KL+E IGDDS+AV+CATGF+PG+D+F PWK      +NLV+ACRK+GV +F+L+
Sbjct: 100 VTEGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVLV 159

Query: 176 SSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTG 235
           SSILVNGAAMGQILNPAY+FLN+FGLTL+AKLQAE+YI+KSGINYTI+RPGGL+N+PPTG
Sbjct: 160 SSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKNDPPTG 219

Query: 236 NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIK 294
           N++ME EDTLYEG+ISRD VAEVAVEALL  ESS+KVVEI++R +APKRSY+DLF S+K
Sbjct: 220 NVVMEPEDTLYEGSISRDLVAEVAVEALLQEESSFKVVEIVARAEAPKRSYKDLFASVK 278

Arabidopsis thaliana (taxid: 3702)

>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2

 Score =  123 bits (309), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/277 (37%), Positives = 147/277 (53%), Gaps = 44/277 (15%)

Query: 45  NSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK 104
           +ST  G  E T+  ++N+      +FVAGATG  G R V +L+  GF V+AGVR+  KA 
Sbjct: 73  SSTAEGIPEKTDSKDDNL------VFVAGATGKVGSRTVRELIKLGFKVRAGVRNAQKAG 126

Query: 105 T------TLSKDNPS--------LQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG-- 148
                   L  D  S        L+IV+ D+ E + ++  A+G+ S  V+CA G      
Sbjct: 127 ALVQSVKQLKLDGASGGGEAVEKLEIVECDL-EKADQIGSALGNAS-TVICAIGASEKEI 184

Query: 149 WDLFAP----WKAI-NLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 203
           +D+  P    ++A  NLV+A     VN FIL++S+  N   +     PA I LN+F   L
Sbjct: 185 FDITGPCRIDYRATKNLVDAATVAKVNHFILVTSLGTNKFGL-----PAAI-LNLFWGVL 238

Query: 204 IAKLQAEQYIRKSGINYTIIRPGGLRNEPPTG------NIIMETEDTLYEGTISRDQVAE 257
           I K +AE+ +  SGI YTI+RPGG+  E PT       N+ + TEDTL+ G +S  QVAE
Sbjct: 239 IWKRKAEEALLASGIPYTIVRPGGM--ERPTDAYKETHNVTLSTEDTLFGGQVSNLQVAE 296

Query: 258 VAVEALLHPESSY-KVVEIISRVDAPKRSYEDLFGSI 293
           +      +P+ SY K+VE+I+   AP    E L   I
Sbjct: 297 LMAIMAKNPDLSYCKIVEVIAETTAPLTPAEKLLTRI 333

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1

 Score =  111 bits (277), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 140/274 (51%), Gaps = 39/274 (14%)

Query: 52  SEITEEAEENVSVKQKK-IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA------- 103
           S +TE +  N++ K++  +FVAGATG  G R V +LL  GF V+AGVR   +A       
Sbjct: 66  SVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSV 125

Query: 104 -----KTTLSKDNP--SLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG--WDLFAP 154
                + T     P   L+IV+ D+ E    +  A+G+ S  ++C  G       D+  P
Sbjct: 126 KEMKLQNTDEGTQPVEKLEIVECDL-EKKDSIQPALGNAS-VIICCIGASEKEISDITGP 183

Query: 155 WK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA 209
           ++       NLV+A     VN FIL++S+  N         PA I LN+F   L  K +A
Sbjct: 184 YRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGF-----PAAI-LNLFWGVLCWKRKA 237

Query: 210 EQYIRKSGINYTIIRPGGLRNEPPTG------NIIMETEDTLYEGTISRDQVAEVAVEAL 263
           E+ + +SG+NY I+RPGG+  E PT       N+ +  +DTL+ G +S  QVAE+     
Sbjct: 238 EEALIESGLNYAIVRPGGM--ERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMA 295

Query: 264 LHPESSY-KVVEIISRVDAPKRSYEDLFGSIKQR 296
            +P+ S+ K+VE+++   AP    E L   I  +
Sbjct: 296 KNPQLSFSKIVEVVAETTAPLTPIEKLLEKIPSK 329

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Arabidopsis thaliana (taxid: 3702)

>sp|Q04304|YMY0_YEAST UPF0659 protein YMR090W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR090W PE=1 SV=1

 Score = 68.2 bits (165), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 30/219 (13%)

Query: 68  KIFVAGATGSSGKRIVEQLLAK-GFAVK-AGVRDLDKA---KTTLSKDNPSLQIVKADVT 122
           K+ V GA+G  G+ ++ QL A   F+   A VR  D+    K  +  D     I  A V+
Sbjct: 5   KVAVVGASGKVGRLLINQLKANDSFSTPLAIVRTQDQVNYFKNEVGVDASLTDIENASVS 64

Query: 123 EGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWK---AINLVEACRKRGVNRFILISSIL 179
           E    +++AI      V  A     G +          I +VEAC K G+ RF+++S++ 
Sbjct: 65  E----ITDAIKAYDAVVFSAGAGGKGMERIFTVDLDGCIKVVEACEKAGIKRFVVVSALK 120

Query: 180 VNGAAMGQILNPAYIFLNVFGLT--LIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNI 237
                          + N+ GL    IAK  A++ +R S ++YTI++PG L     TG  
Sbjct: 121 AEDRDF---------WYNIKGLREYYIAKRSADREVRNSNLDYTILQPGSLELNKGTG-- 169

Query: 238 IMETEDTLYEG-----TISRDQVAEVAVEALLHPESSYK 271
           +++  D L E      +I+R+ VA   VE+LLHP ++ K
Sbjct: 170 LLQPLDKLEEKASVNYSINREDVASFIVESLLHPNATVK 208

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O07609|YHFK_BACSU Uncharacterized sugar epimerase YhfK OS=Bacillus subtilis (strain 168) GN=yhfK PE=2 SV=1

 Score = 65.5 bits (158), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 23/203 (11%)

Query: 68  KIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           K+F+ GA G  G+R+V         +++A VR   K +   S +    + V A++ EGS 
Sbjct: 2   KVFLIGANGQIGQRLVSLFQDNPDHSIRAMVR---KEEQKASLEAAGAEAVLANL-EGSP 57

Query: 127 KLSEAIGDDSEAVV--CATGFQPGWD---LFAPWKAINLVEACRKRGVNRFILISSILV- 180
           +   A     +A++    +G   G+D   L     A   +EA    G+ RFI++S++   
Sbjct: 58  EEIAAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAH 117

Query: 181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIME 240
           N     + L P Y+          AK  A++ +  SG+ YTIIRPGGLRNEP TG +   
Sbjct: 118 NRENWNEALKPYYV----------AKHYADKILEASGLTYTIIRPGGLRNEPGTGTVSAA 167

Query: 241 TEDTLYEGTISRDQVAEVAVEAL 263
            +  L  G ISRD VA+  + +L
Sbjct: 168 KD--LERGFISRDDVAKTVIASL 188

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 4

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2

 Score = 63.2 bits (152), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 44/253 (17%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           + V GA G +G+ + ++L  +     A  R L + K +  K N   ++   D+ + +A +
Sbjct: 79  VLVTGAGGRTGQIVYKKLKERSEQFVA--RGLVRTKESKEKINGEDEVFIGDIRD-TASI 135

Query: 129 SEAIGDDSEAVVCATG----FQPGWD--------LFAPWKAI----------NLVEACRK 166
           + A+ +  +A+V  T      +PG+D         F    A           N ++A + 
Sbjct: 136 APAV-EGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKA 194

Query: 167 RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG 226
            GV + +L+ S+   G  +   LN +    N+    L+ K +AEQY+  SGI YTIIR G
Sbjct: 195 AGVKQIVLVGSM--GGTNINHPLN-SIGNANI----LVWKRKAEQYLADSGIPYTIIRAG 247

Query: 227 GLRNEPPTGNI---IMETEDTLYEG---TISRDQVAEVAVEALLHPESSYKVVEIISRVD 280
           GL+++   G I   ++  +D L E    TI+R  VAEV V+AL   E+ +K +++ S+ +
Sbjct: 248 GLQDK--DGGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPE 305

Query: 281 A---PKRSYEDLF 290
               P + ++ LF
Sbjct: 306 GTGTPTKDFKALF 318

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1

 Score = 58.2 bits (139), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 18/147 (12%)

Query: 159 NLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL--TLIAKLQAEQYIRKS 216
           N ++A +  GV   +++ S       MG   NP +  LN  G    L+ K +AEQY+  S
Sbjct: 115 NQIDAAKVAGVKHIVVVGS-------MGGT-NPDHP-LNKLGNGNILVWKRKAEQYLADS 165

Query: 217 GINYTIIRPGGLRN-EPPTGNIIMETEDTLYE---GTISRDQVAEVAVEALLHPESSYKV 272
           G  YTIIR GGL + E     +++  +D L +    T+ R  VAEV ++ALL  E+  K 
Sbjct: 166 GTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKA 225

Query: 273 VEIISRVDA---PKRSYEDLFGSIKQR 296
            ++ S+ +    P + ++ LF  +  R
Sbjct: 226 FDLGSKPEGTSTPTKDFKALFSQVTSR 252

Arabidopsis thaliana (taxid: 3702)

>sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos taurus GN=NSDHL PE=2 SV=1

 Score = 51.2 bits (121), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 13/118 (11%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
           K K+  V G  G  G+ +VEQLLA+G+AV   V D+ +       DNP +Q    D+   
Sbjct: 19  KAKRCTVIGGCGFLGQHMVEQLLARGYAVN--VFDIRQG-----FDNPRVQFFLGDLCS- 70

Query: 125 SAKLSEAIGDDSEAVVCAT--GFQPGWDLFAPWKAI---NLVEACRKRGVNRFILISS 177
              L  A+   S    CA+   F    +LF     I   N++E C++ GV + IL SS
Sbjct: 71  QQDLYPALKGVSTVFHCASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSS 128

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1

 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 45/175 (25%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           + V GATG+ G++IV + L +G+ VK  VR+L K+          L+   A++  G  KL
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAF--------LKEWGAELVYGDLKL 54

Query: 129 SEAIGDD---SEAVVCATGFQPGWDLFAPWKA--------INLVEACRKRGVNRFILISS 177
            E+I        AV+ A+  +P      P+          I L+EA +   V RFI  S 
Sbjct: 55  PESILQSFCGVTAVIDASTSRPS----DPYNTEQIDLDGKIALIEAAKAAKVQRFIFFS- 109

Query: 178 ILVNGAAMGQILN----PAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGL 228
                     ILN    P    +N+       K Q   Y++KS I+YT+   GG 
Sbjct: 110 ----------ILNADQYPKVPLMNL-------KSQVVNYLQKSSISYTVFSLGGF 147

Porphyra purpurea (taxid: 2787)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9R1J0|NSDHL_MOUSE Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Mus musculus GN=Nsdhl PE=2 SV=1

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 13/132 (9%)

Query: 51  KSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD 110
           + ++T     N   K KK  V G +G  G+ +VEQLL +G+ V   V D+ +       D
Sbjct: 11  RGQVTGTHLTNDISKAKKCTVIGGSGFLGQHMVEQLLERGYTVN--VFDIHQG-----FD 63

Query: 111 NPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT--GFQPGWDLFAPWKAI---NLVEACR 165
           NP +Q    D+      L  A+   S    CA+   +    +LF     I    ++E CR
Sbjct: 64  NPRVQFFIGDLCN-QQDLYPALKGVSTVFHCASPPPYSNNKELFYRVNFIGTKTVIETCR 122

Query: 166 KRGVNRFILISS 177
           + GV + IL SS
Sbjct: 123 EAGVQKLILTSS 134

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
225463460	296	PREDICTED: uncharacterized protein At2g3	0.969	0.969	0.750	1e-121
297740671	335	unnamed protein product [Vitis vinifera]	0.969	0.856	0.750	1e-121
358248271	290	uncharacterized protein LOC100812074 [Gl	0.922	0.941	0.758	1e-118
357478309	292	hypothetical protein MTR_4g115730 [Medic	0.959	0.972	0.730	1e-117
224114353	254	predicted protein [Populus trichocarpa]	0.827	0.964	0.828	1e-116
356512181	292	PREDICTED: uncharacterized protein At2g3	0.929	0.941	0.747	1e-115
147811195	237	hypothetical protein VITISV_030015 [Viti	0.770	0.962	0.849	1e-111
449433642	308	PREDICTED: uncharacterized protein At2g3	0.851	0.818	0.760	1e-109
297823235	285	At2g34460/T31E10.20 [Arabidopsis lyrata	0.841	0.873	0.722	1e-105
30686068	280	NAD(P)-binding Rossmann-fold-containing	0.922	0.975	0.645	1e-105

>gi|225463460|ref|XP_002276135.1| PREDICTED: uncharacterized protein At2g34460, chloroplastic-like [Vitis vinifera]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/305 (75%), Positives = 254/305 (83%), Gaps = 18/305 (5%)

Query: 1   MATPLILRNCPTLCTLNSN----QPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITE 56
           MA+PL+L    TL TL+++    +PPL  +     FS+   +  SHS+ ST+M  SEITE
Sbjct: 1   MASPLLLFRNTTLSTLHNHYRHHRPPLPAVL----FSIKRRR--SHSLYSTQMEGSEITE 54

Query: 57  EAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQI 116
           E E  V+VK K IFVAGATG++GKRIVEQLLAKGFAVKAGVRDLDKAKTT    NPSLQI
Sbjct: 55  EVE--VTVK-KTIFVAGATGNTGKRIVEQLLAKGFAVKAGVRDLDKAKTTFPGGNPSLQI 111

Query: 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-----INLVEACRKRGVNR 171
           VKADVTEGS KL+EAIGDDS+AV+CATGFQ  WDL APWK      +NLVEACRK GVNR
Sbjct: 112 VKADVTEGSVKLAEAIGDDSDAVICATGFQRSWDLLAPWKVDNFGTVNLVEACRKLGVNR 171

Query: 172 FILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNE 231
           FILISSILVNGAAMGQILNPAYIFLN FGL LIAKLQAEQYIRKSGINYTIIRPGGLRN+
Sbjct: 172 FILISSILVNGAAMGQILNPAYIFLNAFGLILIAKLQAEQYIRKSGINYTIIRPGGLRND 231

Query: 232 PPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFG 291
           PPTGNI+ME EDTL EGTISRD VAEVAVEAL+HPE+SYKVVEI+SR DAPKRS++DLF 
Sbjct: 232 PPTGNIVMEPEDTLSEGTISRDHVAEVAVEALVHPEASYKVVEIVSRTDAPKRSFKDLFA 291

Query: 292 SIKQR 296
           SIKQR
Sbjct: 292 SIKQR 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740671|emb|CBI30853.3| unnamed protein product [Vitis vinifera]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/305 (75%), Positives = 254/305 (83%), Gaps = 18/305 (5%)

Query: 1   MATPLILRNCPTLCTLNSN----QPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITE 56
           MA+PL+L    TL TL+++    +PPL  +     FS+   +  SHS+ ST+M  SEITE
Sbjct: 40  MASPLLLFRNTTLSTLHNHYRHHRPPLPAVL----FSIKRRR--SHSLYSTQMEGSEITE 93

Query: 57  EAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQI 116
           E E  V+VK K IFVAGATG++GKRIVEQLLAKGFAVKAGVRDLDKAKTT    NPSLQI
Sbjct: 94  EVE--VTVK-KTIFVAGATGNTGKRIVEQLLAKGFAVKAGVRDLDKAKTTFPGGNPSLQI 150

Query: 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-----INLVEACRKRGVNR 171
           VKADVTEGS KL+EAIGDDS+AV+CATGFQ  WDL APWK      +NLVEACRK GVNR
Sbjct: 151 VKADVTEGSVKLAEAIGDDSDAVICATGFQRSWDLLAPWKVDNFGTVNLVEACRKLGVNR 210

Query: 172 FILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNE 231
           FILISSILVNGAAMGQILNPAYIFLN FGL LIAKLQAEQYIRKSGINYTIIRPGGLRN+
Sbjct: 211 FILISSILVNGAAMGQILNPAYIFLNAFGLILIAKLQAEQYIRKSGINYTIIRPGGLRND 270

Query: 232 PPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFG 291
           PPTGNI+ME EDTL EGTISRD VAEVAVEAL+HPE+SYKVVEI+SR DAPKRS++DLF 
Sbjct: 271 PPTGNIVMEPEDTLSEGTISRDHVAEVAVEALVHPEASYKVVEIVSRTDAPKRSFKDLFA 330

Query: 292 SIKQR 296
           SIKQR
Sbjct: 331 SIKQR 335

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248271|ref|NP_001239852.1| uncharacterized protein LOC100812074 [Glycine max] gi|255645253|gb|ACU23124.1| unknown [Glycine max]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/281 (75%), Positives = 238/281 (84%), Gaps = 8/281 (2%)

Query: 21  PPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGK 80
           P      L KHF+  ++      +N  KM  SEI+E+  E++  K KK+FVAGATGS+GK
Sbjct: 13  PTFHQRHLRKHFTAPSSSL--RLLNLAKMEGSEISEQVGEDLGAK-KKVFVAGATGSTGK 69

Query: 81  RIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140
           RIVEQLLAKGFAVKAGVRD+DKAKTTLS  NPSLQIVKADVTEGS KL+EAIGDDSEAVV
Sbjct: 70  RIVEQLLAKGFAVKAGVRDVDKAKTTLSSANPSLQIVKADVTEGSDKLAEAIGDDSEAVV 129

Query: 141 CATGFQPGWDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF 195
           CATGF+PGWDL APWK      +NLVEACRKR VNRFILISSILVNGAAMGQ+ NPAYIF
Sbjct: 130 CATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGAAMGQLFNPAYIF 189

Query: 196 LNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQV 255
           LNVFGLTL+AKLQAE+YIRKSGINYTIIRPGGLRN+PPTGNI+ME EDTLYEG+ISR  V
Sbjct: 190 LNVFGLTLVAKLQAEKYIRKSGINYTIIRPGGLRNDPPTGNIVMEPEDTLYEGSISRSLV 249

Query: 256 AEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQR 296
           AEVAVEAL +PE+SYKVVEI+SR DAPKR Y DLFGSI+Q+
Sbjct: 250 AEVAVEALAYPEASYKVVEIVSRPDAPKRPYHDLFGSIRQQ 290

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357478309|ref|XP_003609440.1| hypothetical protein MTR_4g115730 [Medicago truncatula] gi|355510495|gb|AES91637.1| hypothetical protein MTR_4g115730 [Medicago truncatula] gi|388494964|gb|AFK35548.1| unknown [Medicago truncatula]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/304 (73%), Positives = 255/304 (83%), Gaps = 20/304 (6%)

Query: 1   MATPLILRNCPTLCTLNSNQPPLRTLTLTKHFSV-STTKTWSHSI-NSTKMGKSEITEEA 58
           MA PLI RN PT  T  S+         T HF+  S+ +T S +I N  KM  SEIT++A
Sbjct: 1   MAFPLIARN-PTFHTFPSH---------THHFTAPSSFRTKSLTIINFAKMEGSEITQQA 50

Query: 59  -EENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIV 117
            ++++S+K KK+FVAGATGS+GKRIVEQLLAKGFAVKAGVRDLDKAKT+LS  NPSLQ V
Sbjct: 51  VDDDLSLK-KKVFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKAKTSLSA-NPSLQFV 108

Query: 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-----INLVEACRKRGVNRF 172
           K DVTEGS KL+EAIGDD+EAVVCATGF+PGWDL APWK      +NLVEACRK  VNRF
Sbjct: 109 KVDVTEGSDKLAEAIGDDTEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKVNVNRF 168

Query: 173 ILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEP 232
           ILISSILVNGAAMGQ+LNPAYIFLNVFGLTL+AKLQAE +IRKSGINYTIIRPGGL+N+P
Sbjct: 169 ILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLKNDP 228

Query: 233 PTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGS 292
           PTGN++ME EDTLYEG+ISRDQVAEVAVE+L +PE+SYKVVEI++R DAPKR+Y DLFGS
Sbjct: 229 PTGNVVMEPEDTLYEGSISRDQVAEVAVESLAYPEASYKVVEIVARPDAPKRAYHDLFGS 288

Query: 293 IKQR 296
           I QR
Sbjct: 289 IVQR 292

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114353|ref|XP_002316736.1| predicted protein [Populus trichocarpa] gi|222859801|gb|EEE97348.1| predicted protein [Populus trichocarpa]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/250 (82%), Positives = 227/250 (90%), Gaps = 5/250 (2%)

Query: 52  SEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN 111
           +EITEEA+ENV+ K+KKIFVAGATGS+GKRIVEQLLAKGF VKAGVRDLDKAKT LS+ N
Sbjct: 5   NEITEEAKENVNQKKKKIFVAGATGSTGKRIVEQLLAKGFEVKAGVRDLDKAKTILSEHN 64

Query: 112 PSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-----INLVEACRK 166
           PSLQIV ADVT+GS KL +AIGDDSEAV+CATGF+PGW+LFAPWK      +NLVEACRK
Sbjct: 65  PSLQIVTADVTKGSDKLVQAIGDDSEAVICATGFRPGWNLFAPWKVDNLGTVNLVEACRK 124

Query: 167 RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG 226
            GV RFILISSILVNGAAMGQILNPAYIFLNVFGLTL+AKLQAE YIRKSGINYTI+RP 
Sbjct: 125 LGVKRFILISSILVNGAAMGQILNPAYIFLNVFGLTLVAKLQAENYIRKSGINYTIVRPA 184

Query: 227 GLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSY 286
           GLRNEPP+GN++ME EDTLYEG ISRD VAEVAVEAL  PESSYKVVEI+SR DAPKR+Y
Sbjct: 185 GLRNEPPSGNLVMEPEDTLYEGIISRDVVAEVAVEALGLPESSYKVVEIVSRADAPKRTY 244

Query: 287 EDLFGSIKQR 296
           EDLFGSIKQ+
Sbjct: 245 EDLFGSIKQK 254

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512181|ref|XP_003524799.1| PREDICTED: uncharacterized protein At2g34460, chloroplastic-like [Glycine max]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/281 (74%), Positives = 237/281 (84%), Gaps = 6/281 (2%)

Query: 21  PPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGK 80
           P      L +HF+  ++ +    +N  KM  SEI+E+        +KK+FVAGATGS+GK
Sbjct: 13  PTFHQRHLKQHFTAPSSSS-LRLLNLAKMEGSEISEQVVGEDLGAKKKVFVAGATGSTGK 71

Query: 81  RIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV 140
           RIVEQLLAKGFAVKAGVRD+DKAKTTLS  NPSLQIVKADVTEGS KL+EAIGDDSEAVV
Sbjct: 72  RIVEQLLAKGFAVKAGVRDIDKAKTTLSSANPSLQIVKADVTEGSDKLAEAIGDDSEAVV 131

Query: 141 CATGFQPGWDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF 195
           CATGF+PGWDL APWK      +NLVEACRKR VNRFILISSILVNGAAMGQ+LNPAYIF
Sbjct: 132 CATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGAAMGQLLNPAYIF 191

Query: 196 LNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQV 255
           LNVFGLTL+AKLQAE+YIRKSGINYTIIRPGGLRN+PPTGN++ME EDTLYEG+ISRD V
Sbjct: 192 LNVFGLTLVAKLQAEKYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDLV 251

Query: 256 AEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQR 296
           AEVAVEAL +PE+ YKVVEI+SR DAPKR Y DLFGSI+Q+
Sbjct: 252 AEVAVEALAYPEAFYKVVEIVSRPDAPKRPYHDLFGSIRQQ 292

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147811195|emb|CAN70158.1| hypothetical protein VITISV_030015 [Vitis vinifera]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/233 (84%), Positives = 211/233 (90%), Gaps = 5/233 (2%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           IFVAGATG++GKRIVEQLLAKGFAVKAGVRDLDKAKTT    NPSLQIVKADVTEGS KL
Sbjct: 5   IFVAGATGNTGKRIVEQLLAKGFAVKAGVRDLDKAKTTFPGGNPSLQIVKADVTEGSVKL 64

Query: 129 SEAIGDDSEAVVCATGFQPGWDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGA 183
           +EAIGDDS+AV+CATGFQ  WDL APWK      +NLVEACRK GVNRFILISSILVNGA
Sbjct: 65  AEAIGDDSDAVICATGFQRSWDLLAPWKVDNFGTVNLVEACRKLGVNRFILISSILVNGA 124

Query: 184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETED 243
           AMGQILNPAYIFLN FGL LIAKLQAEQYIRKSGINYTIIRPGGLRN+PPTGNI+ME ED
Sbjct: 125 AMGQILNPAYIFLNAFGLILIAKLQAEQYIRKSGINYTIIRPGGLRNDPPTGNIVMEPED 184

Query: 244 TLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQR 296
           TL EGTISRD VAEVAVEAL+HPE+SYKVVEI+SR DAPKRS++DLF SIKQR
Sbjct: 185 TLSEGTISRDHVAEVAVEALVHPEASYKVVEIVSRTDAPKRSFKDLFASIKQR 237

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433642|ref|XP_004134606.1| PREDICTED: uncharacterized protein At2g34460, chloroplastic-like [Cucumis sativus] gi|449505910|ref|XP_004162602.1| PREDICTED: uncharacterized protein At2g34460, chloroplastic-like [Cucumis sativus]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/263 (76%), Positives = 228/263 (86%), Gaps = 11/263 (4%)

Query: 44  INSTKMGKSEITEE-----AEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR 98
           +NS KM  +EITEE     + EN++VK +KIFVAGA+GS+GK+IVEQLLA+GF VKAGVR
Sbjct: 47  LNSNKMEGNEITEETAQTQSGENLNVK-RKIFVAGASGSTGKKIVEQLLARGFEVKAGVR 105

Query: 99  DLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA- 157
           D+ KAKTTL   NP+LQIVKADVTEGSAKL+EAIG DSEAV+CATGF+ GWDLFAPWK  
Sbjct: 106 DVSKAKTTLFPANPALQIVKADVTEGSAKLAEAIGSDSEAVICATGFRRGWDLFAPWKVD 165

Query: 158 ----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI 213
               +NLVEACR  G+NRFILISSILVNGAAMGQILNPAYI LN  GL LIAKLQAE++I
Sbjct: 166 NLGTVNLVEACRDLGINRFILISSILVNGAAMGQILNPAYIILNALGLVLIAKLQAEKHI 225

Query: 214 RKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVV 273
           RKSGI+YTIIRPGGL+NEPPTGN++M  EDTLYEG+ISRD VAEVAVEALLH ++SYKVV
Sbjct: 226 RKSGIDYTIIRPGGLKNEPPTGNLVMAPEDTLYEGSISRDLVAEVAVEALLHSQASYKVV 285

Query: 274 EIISRVDAPKRSYEDLFGSIKQR 296
           EI+SR DAPKRSYEDLFGS+KQ 
Sbjct: 286 EIVSRDDAPKRSYEDLFGSVKQH 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823235|ref|XP_002879500.1| At2g34460/T31E10.20 [Arabidopsis lyrata subsp. lyrata] gi|297325339|gb|EFH55759.1| At2g34460/T31E10.20 [Arabidopsis lyrata subsp. lyrata]

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/259 (72%), Positives = 228/259 (88%), Gaps = 10/259 (3%)

Query: 42  HSINSTKMGKSEITEEAEENVSVKQ-KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL 100
            S +S KM + E +EE +   +VK  KK+FVAGATG +GKRIVEQLL++GFAVKAGVRD+
Sbjct: 29  RSFSSIKMERGEASEEKD---AVKTTKKVFVAGATGKTGKRIVEQLLSRGFAVKAGVRDV 85

Query: 101 DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA--- 157
           +KAKT+  KD+PSLQIV+ADVTEG  KL+EAIGDDS+AV+CATGF+PG+D+F PWK    
Sbjct: 86  EKAKTSF-KDDPSLQIVRADVTEGPDKLAEAIGDDSQAVICATGFRPGFDIFTPWKVDNF 144

Query: 158 --INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK 215
             +NLV+ACRK+GV +F+LISSILVNGAAMGQILNPAYIFLN+FGLTL+AKLQAE+YIR+
Sbjct: 145 GTVNLVDACRKQGVEKFVLISSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRR 204

Query: 216 SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEI 275
           SGINYTI+RPGGL+N+PPTGN++ME EDTLYEG+ISRD VAEVAVEALL  ESS+KVVEI
Sbjct: 205 SGINYTIVRPGGLKNDPPTGNVVMEPEDTLYEGSISRDLVAEVAVEALLQEESSFKVVEI 264

Query: 276 ISRVDAPKRSYEDLFGSIK 294
           ++R +APKRSY+DLF S+K
Sbjct: 265 VARAEAPKRSYKDLFASVK 283

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686068|ref|NP_565789.2| NAD(P)-binding Rossmann-fold-containing protein [Arabidopsis thaliana] gi|75151867|sp|Q8H124.1|Y2446_ARATH RecName: Full=Uncharacterized protein At2g34460, chloroplastic; Flags: Precursor gi|24030209|gb|AAN41284.1| unknown protein [Arabidopsis thaliana] gi|330253883|gb|AEC08977.1| NAD(P)-binding Rossmann-fold-containing protein [Arabidopsis thaliana]

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/299 (64%), Positives = 237/299 (79%), Gaps = 26/299 (8%)

Query: 1   MATPLILRNCPTLCTLNSNQPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITEEAEE 60
           MAT L+LR+   +    S+       T  K F          S  S KM      E+ E 
Sbjct: 1   MATSLLLRHSSAVFFSQSS-----FFTKNKSF---------RSFTSIKM------EKGEA 40

Query: 61  NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKAD 120
             +VK KK+FVAGATG +GKRIVEQLL++GFAVKAGVRD++KAKT+  KD+PSLQIV+AD
Sbjct: 41  ENAVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSF-KDDPSLQIVRAD 99

Query: 121 VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-----INLVEACRKRGVNRFILI 175
           VTEG  KL+E IGDDS+AV+CATGF+PG+D+F PWK      +NLV+ACRK+GV +F+L+
Sbjct: 100 VTEGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVLV 159

Query: 176 SSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTG 235
           SSILVNGAAMGQILNPAY+FLN+FGLTL+AKLQAE+YI+KSGINYTI+RPGGL+N+PPTG
Sbjct: 160 SSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKNDPPTG 219

Query: 236 NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIK 294
           N++ME EDTLYEG+ISRD VAEVAVEALL  ESS+KVVEI++R +APKRSY+DLF S+K
Sbjct: 220 NVVMEPEDTLYEGSISRDLVAEVAVEALLQEESSFKVVEIVARAEAPKRSYKDLFASVK 278

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
TAIR|locus:2040854	280	AT2G34460 [Arabidopsis thalian	0.864	0.914	0.704	1.6e-95
UNIPROTKB|Q71X34	209	LMOf2365_2365 "Putative unchar	0.679	0.961	0.318	4.7e-15
TAIR|locus:2087901	641	Tic62 "translocon at the inner	0.591	0.273	0.323	4.8e-15
SGD|S000004696	227	YMR090W "Putative protein of u	0.641	0.837	0.302	7.3e-14
TAIR|locus:2040716	325	AT2G37660 [Arabidopsis thalian	0.722	0.658	0.271	3e-10
TAIR|locus:2015651	598	HCF173 "high chlorophyll fluor	0.202	0.100	0.419	1.1e-08
ASPGD|ASPL0000074771	309	AN4608 [Emericella nidulans (t	0.567	0.543	0.290	2.1e-08
TAIR|locus:2185228	253	AT5G02240 [Arabidopsis thalian	0.729	0.853	0.271	3e-08
TAIR|locus:2102842	510	PTAC16 "plastid transcriptiona	0.584	0.339	0.265	1.1e-06
UNIPROTKB|Q81Q68	211	BAS2389 "Uncharacterized prote	0.493	0.691	0.303	6.5e-06

TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)]

 Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
 Identities = 191/271 (70%), Positives = 231/271 (85%)

Query:    32 FSVST--TKTWS-HSINSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLA 88
             FS S+  TK  S  S  S KM K E      EN +VK KK+FVAGATG +GKRIVEQLL+
Sbjct:    15 FSQSSFFTKNKSFRSFTSIKMEKGEA-----EN-AVKTKKVFVAGATGQTGKRIVEQLLS 68

Query:    89 KGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG 148
             +GFAVKAGVRD++KAKT+  KD+PSLQIV+ADVTEG  KL+E IGDDS+AV+CATGF+PG
Sbjct:    69 RGFAVKAGVRDVEKAKTSF-KDDPSLQIVRADVTEGPDKLAEVIGDDSQAVICATGFRPG 127

Query:   149 WDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL 203
             +D+F PWK      +NLV+ACRK+GV +F+L+SSILVNGAAMGQILNPAY+FLN+FGLTL
Sbjct:   128 FDIFTPWKVDNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTL 187

Query:   204 IAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEAL 263
             +AKLQAE+YI+KSGINYTI+RPGGL+N+PPTGN++ME EDTLYEG+ISRD VAEVAVEAL
Sbjct:   188 VAKLQAEKYIKKSGINYTIVRPGGLKNDPPTGNVVMEPEDTLYEGSISRDLVAEVAVEAL 247

Query:   264 LHPESSYKVVEIISRVDAPKRSYEDLFGSIK 294
             L  ESS+KVVEI++R +APKRSY+DLF S+K
Sbjct:   248 LQEESSFKVVEIVARAEAPKRSYKDLFASVK 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

UNIPROTKB|Q71X34 LMOf2365_2365 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 191 (72.3 bits), Expect = 4.7e-15, P = 4.7e-15
 Identities = 72/226 (31%), Positives = 110/226 (48%)

Query:    69 IFVAGATGSSGKRIVEQL-LAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
             + V GA G  G+ +VE+L + KGF V+A VR   KA+     +    + + AD+ +    
Sbjct:     3 VLVIGANGKIGRLLVEKLAMEKGFFVRAMVR---KAEQVSELEKLGAKPIIADLKKD--- 56

Query:   128 LSEAIGDDSEAVVCATG---FQPGWDLFAPWK--AINLVEACRKRGVNRFILISSILVNG 182
                A  D+ EAV+   G     P  +     +  AI  +E  +++GV RFI++SS   + 
Sbjct:    57 FHYAY-DEIEAVIFTAGSGGHTPASETINIDQNGAIKAIETAKEKGVRRFIIVSSYGADN 115

Query:   183 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETE 242
                G    P  +        L AK  A++ +++SG++YTI+RP GL ++P TG I   +E
Sbjct:   116 PENG----PESLIHY-----LKAKQAADEELKRSGLDYTIVRPVGLSDDPATGKIAEVSE 166

Query:   243 DTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYED 288
                   TI R  VA+   EAL    S YK   I S  D P + + D
Sbjct:   167 KPTT--TIPRADVADFISEALSEKSSFYKTYTIESG-DTPIKHFFD 209

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.8e-15, P = 4.8e-15
 Identities = 63/195 (32%), Positives = 100/195 (51%)

Query:   114 LQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGW--DLFAPWK-----AINLVEACRK 166
             L+IV+ D+ E    +  A+G+ S  ++C  G       D+  P++       NLV+A   
Sbjct:   143 LEIVECDL-EKKDSIQPALGNAS-VIICCIGASEKEISDITGPYRIDYLATKNLVDAATS 200

Query:   167 RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG 226
               VN FIL++S+  N         PA I LN+F   L  K +AE+ + +SG+NY I+RPG
Sbjct:   201 AKVNNFILVTSLGTNKFGF-----PAAI-LNLFWGVLCWKRKAEEALIESGLNYAIVRPG 254

Query:   227 GLRNEPP----TGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSY-KVVEIISRVDA 281
             G+         T N+ +  +DTL+ G +S  QVAE+      +P+ S+ K+VE+++   A
Sbjct:   255 GMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSFSKIVEVVAETTA 314

Query:   282 PKRSYEDLFGSIKQR 296
             P    E L   I  +
Sbjct:   315 PLTPIEKLLEKIPSK 329

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

SGD|S000004696 YMR090W "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 181 (68.8 bits), Expect = 7.3e-14, P = 7.3e-14
 Identities = 66/218 (30%), Positives = 110/218 (50%)

Query:    68 KIFVAGATGSSGKRIVEQLLAK-GFAVK-AGVRDLDKAKTTLSKDNPSLQIVKADVTEGS 125
             K+ V GA+G  G+ ++ QL A   F+   A VR  D+      K+   +     D+   S
Sbjct:     5 KVAVVGASGKVGRLLINQLKANDSFSTPLAIVRTQDQVN--YFKNEVGVDASLTDIENAS 62

Query:   126 -AKLSEAIGDDSEAVVCATGFQ-PGWD-LFAPWK--AINLVEACRKRGVNRFILISSILV 180
              +++++AI    +AVV + G    G + +F       I +VEAC K G+ RF+++S++  
Sbjct:    63 VSEITDAI-KAYDAVVFSAGAGGKGMERIFTVDLDGCIKVVEACEKAGIKRFVVVSALKA 121

Query:   181 NGAAMGQILNPAYIFLNVFGLT--LIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNII 238
                           + N+ GL    IAK  A++ +R S ++YTI++PG L     TG  +
Sbjct:   122 EDRDF---------WYNIKGLREYYIAKRSADREVRNSNLDYTILQPGSLELNKGTG--L 170

Query:   239 METEDTLYEG-----TISRDQVAEVAVEALLHPESSYK 271
             ++  D L E      +I+R+ VA   VE+LLHP ++ K
Sbjct:   171 LQPLDKLEEKASVNYSINREDVASFIVESLLHPNATVK 208

GO:0003674 "molecular_function" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2040716 AT2G37660 [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 69/254 (27%), Positives = 124/254 (48%)

Query:    69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
             + V GA G +G+ + ++L  +     A  R L + K +  K N   ++   D+ + +A +
Sbjct:    79 VLVTGAGGRTGQIVYKKLKERSEQFVA--RGLVRTKESKEKINGEDEVFIGDIRD-TASI 135

Query:   129 SEAIGDDSEAVVCATG----FQPGWD---------LF--------APWKAI-NLVEACRK 166
             + A+ +  +A+V  T      +PG+D          F          W    N ++A + 
Sbjct:   136 APAV-EGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKA 194

Query:   167 RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG 226
              GV + +L+ S+   G  +   LN +    N+    L+ K +AEQY+  SGI YTIIR G
Sbjct:   195 AGVKQIVLVGSM--GGTNINHPLN-SIGNANI----LVWKRKAEQYLADSGIPYTIIRAG 247

Query:   227 GLRNEPP-TGNIIMETEDTLYEG---TISRDQVAEVAVEALLHPESSYKVVEIISRVDA- 281
             GL+++      +++  +D L E    TI+R  VAEV V+AL   E+ +K +++ S+ +  
Sbjct:   248 GLQDKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGT 307

Query:   282 --PKRSYEDLFGSI 293
               P + ++ LF  +
Sbjct:   308 GTPTKDFKALFTQV 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2015651 HCF173 "high chlorophyll fluorescence phenotype 173" [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query:   203 LIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGN-IIMETEDTLYEGTISRDQVAEVAVE 261
             L AK   E  +R+SG+ YTIIRPG L+ EP     +I +  + + +G IS   VA++ V+
Sbjct:   488 LKAKRAGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRISQG-ISCADVADICVK 546

Query:   262 AL 263
             AL
Sbjct:   547 AL 548

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006413 "translational initiation" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

ASPGD|ASPL0000074771 AN4608 [Emericella nidulans (taxid:162425)]

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 54/186 (29%), Positives = 86/186 (46%)

Query:    67 KKIFVAGATGSSGKRIVEQLLA-----KGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADV 121
             K + V GATG+ G+ ++  +LA     K F ++   RD+ K       D   ++IV AD+
Sbjct:     3 KLLTVFGATGNQGRSVINTILADPVLSKEFKIRGITRDVSKPDAKALADK-GVEIVSADM 61

Query:   122 TEGSAKLSEAI-GDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILV 180
             T     L +A+ G  S  +V    F    DL    +  N+ +A ++ GV   I  S + V
Sbjct:    62 TS-IPSLEQALSGSHSVFLVTTPTFTENSDLELT-QGKNVADAAKRAGVQHLIFSSLLNV 119

Query:   181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIME 240
             +G+  G++ N  +     F      K Q EQYIR  GI  T + PG   +      ++ +
Sbjct:   120 SGSTSGRLKNVPH-----FD----HKAQVEQYIRDLGIPATFVLPGYFMSNYVFLGMLRK 170

Query:   241 TEDTLY 246
              ED +Y
Sbjct:   171 GEDGVY 176

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 70/258 (27%), Positives = 121/258 (46%)

Query:    69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
             + V GA+G +G+ IV + L +G + K   + L ++     K      +   D+T+  + +
Sbjct:     7 VLVTGASGRTGQ-IVYKKLKEG-SDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADS-I 63

Query:   129 SEAI-GDDSEAVVCAT--GFQPGWD---------LFA----P----WKAI-NLVEACRKR 167
             + A  G D+  ++ +     +PG+D         +F     P    W    N ++A +  
Sbjct:    64 NPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA 123

Query:   168 GVNRFILISSILVNGAAMGQILNPAYIFLNVFGL--TLIAKLQAEQYIRKSGINYTIIRP 225
             GV   +++ S       MG   NP +  LN  G    L+ K +AEQY+  SG  YTIIR 
Sbjct:   124 GVKHIVVVGS-------MGGT-NPDHP-LNKLGNGNILVWKRKAEQYLADSGTPYTIIRA 174

Query:   226 GGLRN-EPPTGNIIMETEDTLYEG---TISRDQVAEVAVEALLHPESSYKVVEIISRVDA 281
             GGL + E     +++  +D L +    T+ R  VAEV ++ALL  E+  K  ++ S+ + 
Sbjct:   175 GGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEG 234

Query:   282 ---PKRSYEDLFGSIKQR 296
                P + ++ LF  +  R
Sbjct:   235 TSTPTKDFKALFSQVTSR 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2102842 PTAC16 "plastid transcriptionally active 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 50/188 (26%), Positives = 92/188 (48%)

Query:    69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL----DKAKTT-----LSKDNPS-LQIVK 118
             IFVAGATG +G RI + LL +GF+V+AGV DL    D A+       LS D    L  V+
Sbjct:    94 IFVAGATGQAGIRIAQTLLQRGFSVRAGVPDLGAAQDLARVAATYKILSNDEVKRLNAVQ 153

Query:   119 ADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDL-FAPWKAINLVEACRKRGVNRFILISS 177
             +   +  + +++AIG+ ++ VV     + G D   +   A+ +V+A    GV+   ++  
Sbjct:   154 SPFQDAES-IAKAIGNATKVVVTVGATENGPDAQVSTSDALLVVQAAELAGVSHVAIVYD 212

Query:   178 ILVNGAAMGQILNPAYIFLNVFGLTLIAKLQ-AEQYIRKSGINYTIIRPGGLRNEPPTG- 235
               ++G+    +      F N+F  +    +    + + ++ + YT+I+     +  P   
Sbjct:   213 GTISGSTYNVLDGITSFFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKA 272

Query:   236 -NIIMETE 242
              N+++  E
Sbjct:   273 YNVVVSAE 280

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009295 "nucleoid" evidence=IDA

GO:0009508 "plastid chromosome" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

UNIPROTKB|Q81Q68 BAS2389 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)]

 Score = 125 (49.1 bits), Expect = 6.5e-06, P = 6.5e-06
 Identities = 50/165 (30%), Positives = 85/165 (51%)

Query:    68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
             KI + GA G +GK +V + L KG+ VK     L +  T   K N +++ +  D    S  
Sbjct:     6 KIAILGANGKAGKILVNEALEKGYQVKI----LTRNSTNTEKINKNIETIIGDARNFST- 60

Query:   128 LSEAIGDDSEAVVCATGFQPGWDLFAPWKAI--NLVEACRKRGVNRFILIS--SILVNGA 183
             + + +   S AV+ A G QP  + +  +  +  +++EA ++  + R+ILIS  S+ V G 
Sbjct:    61 IQDLLQGCS-AVINAVG-QPKNESYI-FSTVTKHILEAMKESKIKRYILISGGSLNVTGD 117

Query:   184 AMGQILNPAYIFLNVFGLTLIAKLQAE----QYIRKSGINYTIIR 224
               G I+N   I   +F L L   +Q +    Q I+ S +++TI+R
Sbjct:   118 QKG-IINK--IGATLFKLFLPKMMQDKYKELQIIQNSEVDWTIVR 159

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H124	Y2446_ARATH	No assigned EC number	0.6454	0.9222	0.975	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	296
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	1e-161
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	6e-51
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-35
PLN03209	576	PLN03209, PLN03209, translocon at the inner envelo	3e-31
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	5e-29
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	2e-19
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-17
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	8e-15
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	8e-15
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	2e-14
pfam05368	232	pfam05368, NmrA, NmrA-like family	6e-14
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	1e-13
cd08946	200	cd08946, SDR_e, extended (e) SDRs	3e-13
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	3e-12
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	5e-12
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-11
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	1e-10
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	2e-10
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	2e-09
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	4e-09
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	6e-09
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-08
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	3e-08
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	4e-08
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-07
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-07
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	7e-07
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-06
TIGR03649	285	TIGR03649, ergot_EASG, ergot alkaloid biosynthesis	4e-06
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	6e-06
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	6e-06
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	9e-06
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-05
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	1e-05
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	3e-05
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-05
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	4e-05
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	5e-05
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	6e-05
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	8e-05
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	1e-04
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	1e-04
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-04
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-04
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	2e-04
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	2e-04
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	3e-04
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	3e-04
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	6e-04
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	7e-04
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	8e-04
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	8e-04
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	8e-04
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	0.002
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	0.002
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	0.002
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	0.003
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	0.003
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	0.003
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	0.003
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	0.004
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.004
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	0.004
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	0.004
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	0.004

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score =  447 bits (1151), Expect = e-161
 Identities = 197/254 (77%), Positives = 222/254 (87%), Gaps = 8/254 (3%)

Query: 48  KMGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL 107
            M  +E +EE  ENV  K K +FVAGATG +GKRIVEQLLAKGFAVKAGVRD+DKAKT+L
Sbjct: 1   TMEGAEASEEDAENV--KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL 58

Query: 108 SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWK-----AINLVE 162
              +PSLQIV+ADVTEGS KL EAIGDDS+AV+CATGF+  +D FAPWK      +NLVE
Sbjct: 59  -PQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVE 117

Query: 163 ACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTI 222
           ACRK GV RFIL+SSILVNGAAMGQILNPAYIFLN+FGLTL+AKLQAE+YIRKSGINYTI
Sbjct: 118 ACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTI 177

Query: 223 IRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAP 282
           +RPGGL N+PPTGNI+ME EDTLYEG+ISRDQVAEVAVEALL PESSYKVVEI++R DAP
Sbjct: 178 VRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP 237

Query: 283 KRSYEDLFGSIKQR 296
           KRSY+DLF SIKQ+
Sbjct: 238 KRSYKDLFASIKQK 251

Length = 251

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score =  166 bits (422), Expect = 6e-51
 Identities = 75/217 (34%), Positives = 112/217 (51%), Gaps = 21/217 (9%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           K+ V GATG  G+ +V +LL +G+ V+A VRD  +A+     +    ++V  D+T+  + 
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAE---KLEAAGAEVVVGDLTDAES- 56

Query: 128 LSEAIGDDSEAVVCATGFQPGWDLFAPWK-----AINLVEACRKRGVNRFILISSILVNG 182
              A  +  +AV+ A G                  INL++A +K GV RF+L+SSI    
Sbjct: 57  -LAAALEGIDAVISAAGSGGK-GGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSI--GA 112

Query: 183 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPP-TGNIIMET 241
                        L   G  L AK +AE Y+R SG++YTI+RPGGL ++P  TG +++  
Sbjct: 113 DKPSH-------PLEALGPYLDAKRKAEDYLRASGLDYTIVRPGGLTDDPAGTGRVVLGG 165

Query: 242 EDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR 278
           + T  +G ISR  VAEV  EAL  P +  K  E+   
Sbjct: 166 DGTRLDGPISRADVAEVLAEALDTPAAIGKTFELGGG 202

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score =  126 bits (318), Expect = 1e-35
 Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 19/198 (9%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           I V GATG +G+R+V++LLA+G  V A  R+  KA        P +  V+ D+ + +  L
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKA------PAPGVTPVQKDLFDLAD-L 53

Query: 129 SEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS--ILVNGAAMG 186
           +EA+    +AVV A G +P           +L++A  + GV R +++S+  +  +     
Sbjct: 54  AEAL-AGVDAVVDAFGARP----DDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTF 108

Query: 187 QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLY 246
           ++ +       +F     AK  AE+ +R SG+++TI+RPG L +E      I    D   
Sbjct: 109 RLDDA-----PLFPPYARAKAAAEELLRASGLDWTIVRPGALFDEEGETYEIGTEGDPAG 163

Query: 247 EGTISRDQVAEVAVEALL 264
           E +ISR  VA   ++ L 
Sbjct: 164 ESSISRADVAAALLDELE 181

Length = 182

>gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional

 Score =  121 bits (306), Expect = 3e-31
 Identities = 99/319 (31%), Positives = 150/319 (47%), Gaps = 40/319 (12%)

Query: 4   PLILRNCPTLCTLNSNQPPLRTLTLTKHFSVSTTKTWSHSINSTKMGK--SEITEEAEEN 61
             + +           Q  LR    +KH      ++      ++   K  S   E   + 
Sbjct: 16  TSLTKCGFIEKPFLHGQL-LRFPGFSKHPHSRKLRSLDIKAQASGATKFSSAAIEAIPKE 74

Query: 62  VSVKQKKI-FVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT------TLSKDNPS- 113
           +  K + + FVAGATG  G R V +LL  GF V+AGVR   +A++       +  D    
Sbjct: 75  LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGT 134

Query: 114 -----LQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG--WDLFAPWK-----AINLV 161
                L+IV+ D+ E   ++  A+G+ S  V+C  G      +D+  P++       NLV
Sbjct: 135 QPVEKLEIVECDL-EKPDQIGPALGNAS-VVICCIGASEKEVFDVTGPYRIDYLATKNLV 192

Query: 162 EACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT 221
           +A     VN FIL++S+  N     ++  PA I LN+F   L  K +AE+ +  SG+ YT
Sbjct: 193 DAATVAKVNHFILVTSLGTN-----KVGFPAAI-LNLFWGVLCWKRKAEEALIASGLPYT 246

Query: 222 IIRPGGLRNEPPTG------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSY-KVVE 274
           I+RPGG+  E PT       N+ +  EDTL+ G +S  QVAE+      +   SY KVVE
Sbjct: 247 IVRPGGM--ERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVE 304

Query: 275 IISRVDAPKRSYEDLFGSI 293
           +I+   AP    E+L   I
Sbjct: 305 VIAETTAPLTPMEELLAKI 323

Length = 576

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score =  109 bits (275), Expect = 5e-29
 Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 15/215 (6%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           KI + GATG +G  IV + LA+G  V A VRD       L  ++  L++V+ DV +    
Sbjct: 1   KIAIIGATGRTGSAIVREALARGHEVTALVRD----PAKLPAEHEKLKVVQGDVLD-LED 55

Query: 128 LSEAIGDDSEAVVCATGFQPGWDLFAPWK----AINLVEACRKRGVNRFILISSILVNGA 183
           + EA+ +  +AV+ A       DL           N+V A +  GV R I++        
Sbjct: 56  VKEAL-EGQDAVISA--LGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGAGSLDD 112

Query: 184 AMGQILNPAYI-FLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETE 242
                L    + F            +  + +R+SG+++T +RP  L +   TG       
Sbjct: 113 RPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGATGGYYRVEL 172

Query: 243 DTLYEG--TISRDQVAEVAVEALLHPESSYKVVEI 275
               +G   ISR  +A   ++ L  PE   K   I
Sbjct: 173 LVDAKGGSRISRADLAIFMLDELETPEHVRKRPTI 207

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 85.4 bits (212), Expect = 2e-19
 Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 39/219 (17%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           I V GATG  G  +VE LLAK  +V A VR+ +KAK   +     +++ + D  +    L
Sbjct: 1   ILVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADG---VEVRQGDYDD-PETL 56

Query: 129 SEAI-GDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQ 187
             A  G D   ++  +  +            N ++A ++ GV   + +S+    GA    
Sbjct: 57  ERAFEGVDRLLLISPSDLEDRIQQH-----KNFIDAAKQAGVKHIVYLSAS---GADEDS 108

Query: 188 ILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG----GLRNEPPTGNIIMETED 243
               A                 E+Y+  SGI YTI+RPG     L    P+       E 
Sbjct: 109 PFLLA-----------RDHGATEKYLEASGIPYTILRPGWFMDNLLEFLPSIL----EEG 153

Query: 244 TLY----EGT---ISRDQVAEVAVEALLHPESSYKVVEI 275
           T+Y    +G    + R  +AE A  AL  P    KV  +
Sbjct: 154 TIYGPAGDGKVAFVDRRDIAEAAAAALTEPGHEGKVYNL 192

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 80.8 bits (199), Expect = 2e-17
 Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 20/177 (11%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            +I V G  G  G  +VE+LLA G  V+   R  D            ++ V  D+T+   
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDP----LLSGVEFVVLDLTDRDL 56

Query: 127 KLSEAIGDDSEAVVC--ATGFQPGWDLFAPWK--------AINLVEACRKRGVNRFILIS 176
            + E      +AV+   A    P  +   P +         +NL+EA R  GV RF+  S
Sbjct: 57  -VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFAS 115

Query: 177 SILVN-GAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI----RKSGINYTIIRPGGL 228
           S+ V  G      ++             ++KL AEQ +    R  G+   I+RP  +
Sbjct: 116 SVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172

Length = 314

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 70.5 bits (173), Expect = 8e-15
 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 18/165 (10%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           I + GATG  G+ +  +LL +G  V   VR+  +       D   + +V+ D+ +    L
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKE---DQEPVAVVEGDLRD-LDSL 56

Query: 129 SEAIGDDSEAVVCATGFQPGWDLFAP----WKAI-NLVEACRKRGVNRFILISSILVNGA 183
           S+A+    + V+   G     D         +   N++EA ++ GV  FI ISS+   G 
Sbjct: 57  SDAV-QGVDVVIHLAG--APRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGD 113

Query: 184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGL 228
              +                  K + E  +R++ + YTI+RPG +
Sbjct: 114 LHEETEPSPSSPYLAV------KAKTEAVLREASLPYTIVRPGVI 152

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 73.1 bits (180), Expect = 8e-15
 Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 29/176 (16%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           I V GATG  G  +V  LLA+G+ V+A VR    A      D   +++V+ D+T+ ++ L
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLL---DGLPVEVVEGDLTDAAS-L 56

Query: 129 SEAIGDDSEAVVCATGF----QPGWDLFAPWKAIN------LVEACRKRGVNRFILISSI 178
           + A+    + V     F                 N      +++A  + GV R +  SSI
Sbjct: 57  AAAM-KGCDRVFHLAAFTSLWAKDRKEL---YRTNVEGTRNVLDAALEAGVRRVVHTSSI 112

Query: 179 LVNGAAMGQILN-----PAYIFLNVFGLTLIAKLQAEQYIRK---SGINYTIIRPG 226
              G      ++         F N +  +   KL AE  + +    G++  I+ P 
Sbjct: 113 AALGGPPDGRIDETTPWNERPFPNDYYRS---KLLAELEVLEAAAEGLDVVIVNPS 165

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 30/213 (14%)

Query: 69  IFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           I V GATG  G  +V  LL   GF V+A  RD            P +++V+ D+ +  + 
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAA-PGVEVVQGDLDDPES- 58

Query: 128 LSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQ 187
           L  A+      V   T F          +  N+V+A ++ GV  F+  SS + +     +
Sbjct: 59  LEAAL-KGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFV-FSS-VPDVE---K 112

Query: 188 ILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG---------GLRNEPPTGNI- 237
           +      F +        K + E+YIR SG+  TI+RP              +   G + 
Sbjct: 113 LTLAVPHFDS--------KAEVEEYIRASGLPATILRPAFFMENFLTPPAPQKMEDGTLT 164

Query: 238 --IMETEDTLYEGTISRDQVAEVAVEALLHPES 268
             +    DT     I    +          P  
Sbjct: 165 LVLPLDPDTKLPM-IDVADIGPAVAAIFKDPAK 196

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 69.2 bits (170), Expect = 6e-14
 Identities = 45/158 (28%), Positives = 62/158 (39%), Gaps = 15/158 (9%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           I V GATG  G  +V   L  G  V+A VRD         K     ++V+ D+ +    L
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGV-ELVEGDLDD-HESL 58

Query: 129 SEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQI 188
            EA+    + V   TGF          K   L +A ++ GV  FI  S            
Sbjct: 59  VEAL-KGVDVVFSVTGFWLS-KEIEDGK--KLADAAKEAGVKHFIP-SEF----GNDVDR 109

Query: 189 LNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG 226
            N     +  F     +K + E+YIR  GI YT +  G
Sbjct: 110 SNGVEPAVPHFD----SKAEVERYIRALGIPYTFVYAG 143

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 65/272 (23%), Positives = 105/272 (38%), Gaps = 54/272 (19%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK-----TTLSKDNPSLQIVKADVTE 123
           +FV G TG  G+ +V++LL  GF V   VR     +          +   +++++ D+T+
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 124 GSAKLSEAIGDDSEAVV--------CATGFQPGWDLFAPWK-----AINLVEACRKRGVN 170
            +  LS A    S  +         CA  +         W+       +++E   +  + 
Sbjct: 61  PNLGLSAA---ASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117

Query: 171 RFILISSILVNGAAMGQI----LNPAYIFLNVFGLTLIAKLQAEQYIRKSG--INYTIIR 224
           RF  +S+  V G   G I    LNP   F N +  +   K +AEQ +R +   I  T+ R
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQS---KAEAEQLVRAAATQIPLTVYR 174

Query: 225 PGGLRNEPPTGNIIMETEDTLYE--------GT--------------ISRDQVAEVAVEA 262
           P  +  +  TG I  E  D LYE        G               +  D VA+  V  
Sbjct: 175 PSIVVGDSKTGRI--EKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYL 232

Query: 263 LLHPESSYKVVEIISRVDAPKRSYEDLFGSIK 294
              PE++ ++  +        R   DLF S  
Sbjct: 233 SKKPEANGQIFHLTDPTPQTLREIADLFKSAF 264

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 66.6 bits (163), Expect = 3e-13
 Identities = 41/173 (23%), Positives = 56/173 (32%), Gaps = 55/173 (31%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           I V G  G  G  +V +LL +G  V                                   
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVV---------------------------------- 26

Query: 129 SEAIGDDSEAVV---CATGFQPGWDLFAPWKAIN------LVEACRKRGVNRFILISSIL 179
              + D  + VV      G    WD        N      L+EA RK GV RF+  SS  
Sbjct: 27  ---VIDRLDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSAS 83

Query: 180 VNGAAMGQILNPAYIF--LNVFGLTLIAKLQAEQYIR----KSGINYTIIRPG 226
           V G+  G           L+ +G++   KL AE  +R      G+   I+R  
Sbjct: 84  VYGSPEGLPEEEETPPRPLSPYGVS---KLAAEHLLRSYGESYGLPVVILRLA 133

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 65.3 bits (159), Expect = 3e-12
 Identities = 51/217 (23%), Positives = 79/217 (36%), Gaps = 26/217 (11%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            KI V GATG  G  +V +LLA+G  V+A VR+ + A          +++V  D+ +   
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAA----ALAGGVEVVLGDLRD--P 54

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
           K   A     + V+  +G   G D F   +   +V A    G      +S          
Sbjct: 55  KSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLS----VLGA 110

Query: 187 QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGL--RNEPPTGNIIMETEDT 244
              +P+ +          AK   E  +R SGI YT +R                      
Sbjct: 111 DAASPSALA--------RAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLP 162

Query: 245 LYE------GTISRDQVAEVAVEALLHPESSYKVVEI 275
           +          I+ D VAE    AL  P ++ +  E+
Sbjct: 163 VIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYEL 199

Length = 275

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 42/235 (17%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           I V G TG  G  +V +LL +G+ V    R     + + S +   ++  + D+T+  A L
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGR----RRRSESLNTGRIRFHEGDLTDPDA-L 55

Query: 129 SEAIGDDS-EAVVCATGFQPGWDLFA-PWKAI--------NLVEACRKRGVNRFILISSI 178
              + +   +AV+           F  P   I         L+EA R+ GV RF+  SS 
Sbjct: 56  ERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFASSS 115

Query: 179 LVNGAAMGQILNPAYIF--LNVFGLTLIAKLQAEQ----YIRKSGINYTIIRPG-----G 227
            V G      +        L+ +     AKL AE+    Y R  G+   I+R       G
Sbjct: 116 EVYGDVADPPITEDTPLGPLSPYA---AAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172

Query: 228 LRNEPPTG-------NIIMETEDTLY-EGTISRD-----QVAEVAVEALLHPESS 269
             +   T         I+      L  +GT  RD      VA   + AL HP+  
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGG 227

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 24/167 (14%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTLSKDNPSLQIVKADVTEGS 125
             + V GATG  G+ +V +L  +G  V    R      +  +  D   +  V+ D+ +  
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDD- 59

Query: 126 AKLSEAIGDDSEAVVCATG--FQPG----WDLFAPWKAINLVEACRKRGVNRFILISSIL 179
             + +A+ + S+ V+   G  ++       D+        L +A ++ GV R I IS   
Sbjct: 60  ESIRKAL-EGSDVVINLVGRLYETKNFSFEDVHVEG-PERLAKAAKEAGVERLIHIS--- 114

Query: 180 VNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG 226
               A+G   N    +       L +K + E+ +R++    TI+RP 
Sbjct: 115 ----ALGADANSPSKY-------LRSKAEGEEAVREAFPEATIVRPS 150

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 28/174 (16%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-----DKAKTTLSKDNPSLQIVKA 119
           K   + V GATG  GK +V +L+ +G+ V A  R+         K    K+ P  ++V  
Sbjct: 59  KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFG 118

Query: 120 DVTEGSA--KLSEAIGDDSEAVVC-----ATGFQPGWDLFAPWKA-INLVEACRKRGVNR 171
           DVT+  +  K+  + GD  + VV        G +  W +   ++A  N ++A R+ G   
Sbjct: 119 DVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKI--DYQATKNSLDAGREVGAKH 176

Query: 172 FILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRP 225
           F+L+S+I V          P   F     L   A+LQA      S   Y+I+RP
Sbjct: 177 FVLLSAICVQ--------KPLLEFQRA-KLKFEAELQALD----SDFTYSIVRP 217

Length = 390

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 53/214 (24%), Positives = 81/214 (37%), Gaps = 39/214 (18%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           I V GATG  G ++   LL  G  V+A VR  ++A    ++     ++V  D+    A L
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAAR---GAEVVVGDLD-DPAVL 56

Query: 129 SEAIGDDSEAVVCATGFQPGWDLF--APWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
           + A+         A    P  D        A     A R+ GV R + +SS+   GA   
Sbjct: 57  AAALAGVDAVFFLAPP-APTADARPGYVQAAEAFASALREAGVKRVVNLSSV---GA--- 109

Query: 187 QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLY 246
              +P+       GL     L  EQ +  +G+    +RP          N++ +      
Sbjct: 110 DPESPS-------GLIRGHWL-MEQVLNWAGLPVVHLRPAWFME-----NLLSQAPSIRK 156

Query: 247 EGT-------------ISRDQVAEVAVEALLHPE 267
            G              I+ D +A VA + LL PE
Sbjct: 157 AGVLALPFPGDGRLPPIATDDIARVAAKLLLDPE 190

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 50/214 (23%), Positives = 78/214 (36%), Gaps = 35/214 (16%)

Query: 68  KIFVAGATGSSGKRIVEQLLA-KGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           KI +AGATG+ G  IV  LLA  GF V    R    +          +++V  D      
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQ--PSGVKVVPVDYAS-HE 57

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
            L  A+    +AV+ A G        A    + L++A    GV RFI       +   + 
Sbjct: 58  SLVAAL-KGVDAVISALGG------AAIGDQLKLIDAAIAAGVKRFI------PSEFGVD 104

Query: 187 QILNPAYIFLNVFGLTLIAKLQAEQYIRKS--GINYTIIRPG-----GLRNEPPTGN--- 236
                A   L++F      K    +Y+R    G+ +T +  G      L       +   
Sbjct: 105 YDRIGALPLLDLFD----EKRDVRRYLRAKNAGLPWTYVSTGMFLDYLLEPLFGVVDLAN 160

Query: 237 ---IIMETEDTLYEGTISRDQVAEVAVEALLHPE 267
               I    +T +  T + + +      AL HP+
Sbjct: 161 RTATIYGDGETKFAFT-TLEDIGRAVARALTHPD 193

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 16/203 (7%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS 125
           KK+ + GA G   +     LL      +   +R+   A   L   +  + +V+ D    S
Sbjct: 1   KKVLILGANGEIAREATTMLLENSNVELTLFLRN---AHRLLHLKSARVTVVEGDALN-S 56

Query: 126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAM 185
             L  A+    + V    G   G DL    +A N+V+A +  GV R I  +S+ +     
Sbjct: 57  DDLKAAM-RGQDVVYANLG---GTDL--DQQAENVVQAMKAVGVKRLIWTTSLGIYDEVP 110

Query: 186 GQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTL 245
           G+            G  L    ++   I  S ++YT++RP  L N     +  +  +   
Sbjct: 111 GKF---GEWNKEFIGNYLAPYRKSAAVIENSDLDYTLLRPAWLTNN-DEIDYELTPKGEA 166

Query: 246 YEGT-ISRDQVAEVAVEALLHPE 267
           ++GT +SR  VA++  + + HP+
Sbjct: 167 FKGTEVSRKSVADLITDIINHPD 189

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 43/167 (25%), Positives = 63/167 (37%), Gaps = 20/167 (11%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            KI + G T   GK +VE+LLA G  V    R       T       ++ +  D  +  A
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVTVFNR-----GRTKPDLPEGVEHIVGDRNDRDA 55

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
            L E +G +   VV           + P +    ++A + R V ++I ISS  V      
Sbjct: 56  -LEELLGGEDFDVVV------DTIAYTPRQVERALDAFKGR-VKQYIFISSASVYLKPGR 107

Query: 187 QIL------NPAYIFLNVFGLTLIAKLQAEQY-IRKSGINYTIIRPG 226
            I        P  + L+        K  AE   I  +   YTI+RP 
Sbjct: 108 VITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPP 154

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 61/250 (24%), Positives = 92/250 (36%), Gaps = 52/250 (20%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA---KTTLSKD--NPSLQIVKADVT 122
            + V GATG     IVEQLL  G+ V+  VR L K+   K  L     N  L+ V  D  
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 123 EGSAKLSEAIGDDSEAVVCA-----TGFQPGWDLFAPWKAI----NLVEACRKRG-VNRF 172
                  EA+      +  A     TG     D+  P  A+    N++EA +  G V R 
Sbjct: 61  TAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDP--AVEGTLNVLEAAKAAGSVKRV 118

Query: 173 ILISSILVNGAAMGQILNPAYIF---------------LNVF-GLTLIAKLQAEQYIR-- 214
           +L SS+           +P  +F               L+ +     +A+  A ++++  
Sbjct: 119 VLTSSVA--AVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKEN 176

Query: 215 KSGINYTIIRPG------GLRNEPPTGN---------IIMETEDTLYEGTISRDQVAEVA 259
           K       I PG       L +E  + N          +      L  G +    VA+  
Sbjct: 177 KPKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPFGYVDVRDVADAH 236

Query: 260 VEALLHPESS 269
           V AL  PE++
Sbjct: 237 VRALESPEAA 246

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 13/119 (10%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            KI + GA+G +G RI+++ L +G  V A VR  + +K    +    + I++ D+ + ++
Sbjct: 1   MKIAIIGASGKAGSRILKEALKRGHEVTAIVR--NASKLAARQG---VTILQKDIFDLTS 55

Query: 127 KLSEAIGDDSEAVVCATGF-QPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAA 184
             S+  G D  AV+ A G      D         L+EA +  GV R      ++V GA 
Sbjct: 56  LASDLAGHD--AVISAFGAGASDNDELHSKSIEALIEALKGAGVPRL-----LVVGGAG 107

Length = 211

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 31/167 (18%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           + V GATG+ G++IV Q L +G+ V+  VR+L KA          L+   A++  G   L
Sbjct: 3   LLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF--------LKEWGAELVYGDLSL 54

Query: 129 SEAIGDDSE---AVVCATGFQPGWDLFA----PWKA-INLVEACRKRGVNRFILISSILV 180
            E +    +   A++ A+  +P  DL+      W   + L+EA +   + RFI  S    
Sbjct: 55  PETLPPSFKGVTAIIDASTSRPS-DLYNAKQIDWDGKLALIEAAKAAKIKRFIFFS---- 109

Query: 181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG 227
                  ILN A  +  +  + L  K   EQ ++KSGI YTI R  G
Sbjct: 110 -------ILN-AEQYPYIPLMKL--KSDIEQKLKKSGIPYTIFRLAG 146

Length = 317

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 46/224 (20%), Positives = 70/224 (31%), Gaps = 17/224 (7%)

Query: 66  QKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE 123
             K  VAGA G  G  ++  LL     F        +  A+   +     + +       
Sbjct: 53  DPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADA 112

Query: 124 GS-AKLSEAIGDDSEAVVCATG----------FQPGWDLFAPWKAINLVEACRKRGVNRF 172
            S + L+ A     EA + ++G          F  G        A         RG+ R 
Sbjct: 113 ASPSALARAKAA-VEAALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRL 171

Query: 173 ILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEP 232
             I+   V  A    +  PA          L            SG++YTI RP GL  E 
Sbjct: 172 SPIAVDDVAEALAAALDAPAT---AGRTYELAGPEALTLAELASGLDYTIGRPVGLIPEA 228

Query: 233 PTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEII 276
                +  +   L  G ++R  VA    E L    +    +  +
Sbjct: 229 LAALTLALSGLGLLPGFVARALVAGDIGELLGDLAADSGKLSEL 272

Length = 275

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 18/123 (14%)

Query: 71  VAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT-----LSKDNPSLQIVKADVT-EG 124
           V GA+G  G  +V++LL +G+ V+A VRD    K       L      L++ KAD+   G
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLDYG 62

Query: 125 SAKLSEAIGDDSEAVVC-ATGFQPG-----WDLFAPW--KAINLVEACRK-RGVNRFILI 175
           S     AI D  + V   A+           ++  P     +N++EAC K + V R +  
Sbjct: 63  S--FDAAI-DGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFT 119

Query: 176 SSI 178
           SS+
Sbjct: 120 SSV 122

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 46/178 (25%), Positives = 66/178 (37%), Gaps = 46/178 (25%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVR------DLDKAKTTLSKDNPSLQI----- 116
           KI + GA G  G  +   L    F V A  R      D D     + +  P + I     
Sbjct: 2   KILITGANGQLGTELRRAL-PGEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAY 60

Query: 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILIS 176
              D  E   +L+ A+         ATG            A NL  A  + G  R + IS
Sbjct: 61  TAVDKAESEPELAFAVN--------ATG------------AENLARAAAEVGA-RLVHIS 99

Query: 177 SILV-NGAAMGQ-----ILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGL 228
           +  V +G   G        NP    LNV+G +   KL  E+ +R +G  + I+R   +
Sbjct: 100 TDYVFDGEKGGPYKETDTPNP----LNVYGRS---KLAGEEAVRAAGPRHLILRTSWV 150

Length = 281

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 25/174 (14%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGS 125
           I V G  G  G  +V++LL +G  V   V +L   +    +   +N + + VK D+ + +
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGNEVVV-VDNLSSGRRENIEPEFENKAFRFVKRDLLDTA 60

Query: 126 AKLSEAIGDD-----SEAVVCATGFQPGWDL----FAPWKAINLVEACRKRGVNRFILIS 176
            K+++  GD      +   V      P  DL     A +   N++EA R  GV R +  S
Sbjct: 61  DKVAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATY---NVLEAMRANGVKRIVFAS 117

Query: 177 SILVNGAAMGQIL--NPAYIFLNVFGLTLIAKLQAEQYI----RKSGINYTIIR 224
           S  V G A       +   + ++V+G    +KL AE  I       G    I R
Sbjct: 118 SSTVYGEAKVIPTPEDYPPLPISVYG---ASKLAAEALISAYAHLFGFQAWIFR 168

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|234294 TIGR03649, ergot_EASG, ergot alkaloid biosynthesis protein, AFUA_2G17970 family

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 62/243 (25%), Positives = 87/243 (35%), Gaps = 64/243 (26%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS--- 125
           I + G TG +  RI   L A         R    +        P+ + VK D  +     
Sbjct: 2   ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS------AGPNEKHVKFDWLDEDTWD 55

Query: 126 AKLSEAIGDDSE-AVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILI--SSILVNG 182
              S   G + E + V      P  DL  P   I  ++  R +GV RF+L+  S I   G
Sbjct: 56  NPFSSDDGMEPEISAVYLVA-PPIPDLAPP--MIKFIDFARSKGVRRFVLLSASIIEKGG 112

Query: 183 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-KSGINYTIIRPG----GLRNEPPTGNI 237
            AMGQ+                       ++    G+ YT++RP         E     I
Sbjct: 113 PAMGQV---------------------HAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAI 151

Query: 238 IMETEDTLYEGT-------ISRDQVAEVAVEAL------------LHPES-SY-KVVEII 276
               E+ +Y  T       +S D +A VA  AL            L PE  +Y  V EI+
Sbjct: 152 --RKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEIL 209

Query: 277 SRV 279
           SRV
Sbjct: 210 SRV 212

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. Length = 285

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 41/166 (24%), Positives = 65/166 (39%), Gaps = 19/166 (11%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           K+FV GATG  G  +V +L+A G  V    R  D     L       Q+ + D+ +    
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVVGLARS-DAGAAKLE--AAGAQVHRGDLEDLDIL 58

Query: 128 LSEAIGDDSEAVVCATGFQPGWDLFAPWKAIN------LVEACRKRGVNRFILISSILVN 181
              A   +++AV+    F   +D FA    ++      L EA R  G    I  S I + 
Sbjct: 59  RKAAA--EADAVI-HLAFTHDFDNFAQACEVDRRAIEALGEALRGTGK-PLIYTSGIWLL 114

Query: 182 GAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS---GINYTIIR 224
           G   GQ  +           T  A+  +E    +    G+  +++R
Sbjct: 115 GPTGGQEEDEEAPD---DPPTPAARAVSEAAALELAERGVRASVVR 157

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 16/122 (13%)

Query: 71  VAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA--KTTLSKDN-PSLQIVKADVTEGSAK 127
           V G +G  G+R+V+QLL +G      VR  D A     LS    P+++ +K D+T+ +  
Sbjct: 4   VTGGSGFFGERLVKQLLERG---GTYVRSFDIAPPGEALSAWQHPNIEFLKGDITDRND- 59

Query: 128 LSEAIGDDSEAVVCAT--GFQPGWDLFAPWK-----AINLVEACRKRGVNRFILISSILV 180
           + +A+         A         DL+  W+       N+++AC++ GV +F+  SS  V
Sbjct: 60  VEQALSGADCVFHTAAIVPLAGPRDLY--WEVNVGGTQNVLDACQRCGVQKFVYTSSSSV 117

Query: 181 NG 182
             
Sbjct: 118 IF 119

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 34/177 (19%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           K+ V GA G  G+ +V++LL++G  V+  VR   +   + +  + P +            
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDIDSFTDLF----- 55

Query: 127 KLSEAIGDDSEAVV-CA--------TGFQPGWDLFAPWKA--INLVEACRKRGVNRFILI 175
                     +AVV  A         G  P  D           L  A  ++GV RF+ +
Sbjct: 56  -------LGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFL 108

Query: 176 SSILVNGAA-MGQILNPAYIFLNV--FGLTLIAKLQAEQYIRK----SGINYTIIRP 225
           SS+ VNG   +G   +          +G    +KL+AE+ + +     G+   I+RP
Sbjct: 109 SSVKVNGEGTVGAPFDETDPPAPQDAYG---RSKLEAERALLELGASDGMEVVILRP 162

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)

Query: 61  NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKA 119
            + +K K + V GA    G+  VEQLLA+G A V A  RD +    +++   P +  ++ 
Sbjct: 1   MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPE----SVTDLGPRVVPLQL 56

Query: 120 DVT--EGSAKLSEAIGD 134
           DVT     A  +EA  D
Sbjct: 57  DVTDPASVAAAAEAASD 73

Length = 238

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 34/178 (19%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            K+ + G  G  G  ++E LL +G  V   + +    +     D+P+L +V+  + +  A
Sbjct: 1   MKVLITGGAGQIGSHLIEHLLERGHQV-VVIDNFATGRREHLPDHPNLTVVEGSIAD-KA 58

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWK---------------AINLVEACRKRGVNR 171
            + +  GD     V  T         A +K                 N+V+A +K GV R
Sbjct: 59  LVDKLFGDFKPDAVVHTA--------AAYKDPDDWYEDTLTNVVGGANVVQAAKKAGVKR 110

Query: 172 FILISSILVNGAAMGQILNPAYIFLN-----VFGLTLIAKLQAEQYIRKSGINYTIIR 224
            I   + L  G  +  +  P  I L+           I+K   E Y+  SG+++   R
Sbjct: 111 LIYFQTALCYG--LKPMQQP--IRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFR 164

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 2/93 (2%)

Query: 64  VKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVT 122
           +K K + V GA    GK  VE LLA G   V A VRD   A   ++K    +  ++ DVT
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60

Query: 123 E-GSAKLSEAIGDDSEAVVCATGFQPGWDLFAP 154
           +  S K + A   D + V+   G      L   
Sbjct: 61  DPESIKAAAAQAKDVDVVINNAGVLKPATLLEE 93

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 31/178 (17%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           ++ + G  G  G  +V+ LL +G  V+      D++          +  +K D  E  A 
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRV----FDRSIPPYELPLGGVDYIKGD-YENRAD 55

Query: 128 LSEAIGDDSEAV---VCAT-----GFQPGWDLFAP-WKAINLVEACRKRGVNRFILISSI 178
           L  A+    + V      T        P  D+       + L+EAC   G+ + I  SS 
Sbjct: 56  LESAL-VGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFASS- 113

Query: 179 LVNGAAMGQILNPAY------IFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPG 226
              G   G             + ++ +G++   KL  E+Y+R      G++YT++R  
Sbjct: 114 --GGTVYGVPEQLPISESDPTLPISSYGIS---KLAIEKYLRLYQYLYGLDYTVLRIS 166

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 46/177 (25%), Positives = 67/177 (37%), Gaps = 45/177 (25%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVR------DLDKAKTTLSKDNPSLQIVKA--- 119
           I V GA G  G+ +   L  +G  V A  R      D +     + +  P + +V A   
Sbjct: 1   ILVTGANGQLGRELTRLLAERGVEVVALDRPELDLTDPEAVAALVREARPDV-VVNAAAY 59

Query: 120 -DVTEGSAKLSEAIGDDSEAV-VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS 177
             V +     +E+  + + AV     G              NL EAC  RG    I IS+
Sbjct: 60  TAVDK-----AESEPELAYAVNALGPG--------------NLAEACAARGA-PLIHIST 99

Query: 178 ILV-NGAAMGQ-----ILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGL 228
             V +GA  G         P    LNV+G T   KL  EQ +  +   + I+R   +
Sbjct: 100 DYVFDGAKGGPYREDDPTGP----LNVYGRT---KLAGEQAVLAANPRHLILRTAWV 149

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 57  EAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSL 114
              E          V GATG  G  +V+ LL +G+ V A +RD  K+   LSK  +   L
Sbjct: 1   MELEGRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRL 60

Query: 115 QIVKADVT-EGS 125
           ++ +AD+  EGS
Sbjct: 61  RLFRADLQEEGS 72

Length = 353

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 43.5 bits (102), Expect = 6e-05
 Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 45/268 (16%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKT----TLSKDNPSLQIVKADV 121
           K + V GA+G     IV+ LL +G+ VKA VRDL D+ KT     L      L++ KAD+
Sbjct: 6   KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADL 65

Query: 122 TEGSAKLSEAIGDD----SEAVVCATGFQPGWDLFAPW--KAINLVEACRK-RGVNRFIL 174
            E S+      G D    + + V  T   P  +L  P     IN++  C++   V R IL
Sbjct: 66  LEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVIL 125

Query: 175 ISS---ILVNGAAMG--QILNPAYI--------FLNVFGLT-LIAKLQAEQYIRKSGINY 220
            SS   +L     +    +++  +           N + L+ ++A+  A ++ + +GI+ 
Sbjct: 126 TSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDM 185

Query: 221 TIIRPGGLRNE--PPTGNIIMET-----------EDTLYEGTISRDQVAEVAVEALLHPE 267
            ++ PG +      PT N  +E             +  Y     RD VA   ++AL  P 
Sbjct: 186 VVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRD-VALAHIKALETPS 244

Query: 268 SSYKVVEIISRVDAPKRSYEDLFGSIKQ 295
           ++ + +     +D P  S  D+   +++
Sbjct: 245 ANGRYI-----IDGPIMSVNDIIDILRE 267

Length = 322

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 56/236 (23%), Positives = 89/236 (37%), Gaps = 34/236 (14%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           + V GATG  G R+V +LL +G  V+A VR  +  K      +  + +V+ D+ E    L
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPE--KLADRPWSERVTVVRGDL-EDPESL 57

Query: 129 SEAIGDDSEAVVCATGFQPGWDLFAPWK--AINLVEACRKRGVNRFILISSILVNG---- 182
             A+     A         G D     +  A N   A R  GV R I +  ++  G    
Sbjct: 58  RAALEGIDTAYYLVHSMGSGGDFEEADRRAARNFARAARAAGVKRIIYLGGLIPKGEELS 117

Query: 183 ------AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGN 236
                 A +G+IL    + +           +A   I     ++ ++R   L    P   
Sbjct: 118 PHLRSRAEVGEILRAGGVPVTEL--------RAAVIIGSGSASFEMVR--YLVERLP--- 164

Query: 237 IIMETEDTLYEGT--ISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLF 290
            +M T   +      I+   V E  V AL  P ++ +  EI         SY+D+ 
Sbjct: 165 -VMITPRWVNTPCQPIAIRDVLEYLVAALDRPATAGETFEIGGP---DVLSYKDMM 216

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 45/184 (24%), Positives = 63/184 (34%), Gaps = 54/184 (29%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFA--VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
           K   V GATG  GK ++ +LL   +   V A VR                   K    E 
Sbjct: 1   KTALVLGATGLVGKHLLRELLKSPYYSKVTAIVRR------------------KLTFPEA 42

Query: 125 SAKLSEAIGDDSEAVVCATGFQPGWDLF---------APWKA----------INLVEACR 165
             KL + + D          FQ     F         A  +           + L +  +
Sbjct: 43  KEKLVQIVVDFERLDEYLEAFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAK 102

Query: 166 KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTII-R 224
             GV  F+L+SS+   GA      +P   F     L L  K + E+ ++K G     I R
Sbjct: 103 AAGVQHFLLVSSL---GA------DPKSSF-----LYLKVKGEVERDLQKLGFERLTIFR 148

Query: 225 PGGL 228
           PG L
Sbjct: 149 PGLL 152

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 45/186 (24%), Positives = 70/186 (37%), Gaps = 41/186 (22%)

Query: 71  VAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT-LSKDNPSLQIVKA---DVTEGSA 126
           V G  G  G+ IV  LL +G      VR  D   +  L +D   LQ++     DVT+   
Sbjct: 2   VTGGGGFLGRHIVRLLLREG--ELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTD-KQ 58

Query: 127 KLSEAIGDDSEAVV---CATGFQPGWDLFAP------WKAI-----NLVEACRKRGVNRF 172
            L  A+   S+ V+            D+F         K       N+++AC K GV   
Sbjct: 59  DLRRAL-QGSDVVIHTAAII------DVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVL 111

Query: 173 ILISSILVNGAAM-GQI-------LNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIR 224
           +  SS+ V G    GQ                + +  +   K  AE+ + K+  N + ++
Sbjct: 112 VYTSSMEVVGPNSYGQPIVNGDETTPYESTHQDPYPES---KALAEKLVLKA--NGSTLK 166

Query: 225 PGGLRN 230
            GG   
Sbjct: 167 NGGRLY 172

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 30/197 (15%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            K+ V GATG  G  +V  LL +G  V+  VR     +     D   ++IV+ D+ + ++
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLD---VEIVEGDLRDPAS 57

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAI----------NLVEACRKRGVNRFILIS 176
                 G  +   V A      + L+AP              NL+ A  + GV R +  S
Sbjct: 58  LRKAVAGCRALFHVAAD-----YRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTS 112

Query: 177 SILVNG-AAMGQILNPAY--IFLNVFGLTLIAKLQAEQ----YIRKSGINYTIIRPG--- 226
           S+   G    G   +        ++ G    +K  AEQ       + G+   I+ P    
Sbjct: 113 SVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPI 172

Query: 227 GLRN-EP-PTGNIIMET 241
           G R+ +P PTG II++ 
Sbjct: 173 GPRDIKPTPTGRIIVDF 189

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 30/146 (20%), Positives = 48/146 (32%), Gaps = 30/146 (20%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTE 123
           K   V GA+   G+ I  +L A G  V     + + A+     L       +++  DV++
Sbjct: 6   KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD 65

Query: 124 GSAKLSEAIGDDSEA-----VVCA----TGFQPGWDL-FAPWK---AINL------VEAC 164
             A +   I    EA     ++      T       +    W     +NL      V A 
Sbjct: 66  -EAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAA 124

Query: 165 ----RKRGVNRFILISSILVNGAAMG 186
                K    R + ISS+       G
Sbjct: 125 LPPMIKARYGRIVNISSV---SGVTG 147

Length = 246

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 52/227 (22%), Positives = 82/227 (36%), Gaps = 47/227 (20%)

Query: 69  IFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           I V GATG  G  ++  LLAKG   V+A VR+++KA T        +++ + D       
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATLAD---QGVEVRQGDY-NQPEL 56

Query: 128 LSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQ 187
           L +A    S+  +               K  N+ +A R+ GV     I S     A   +
Sbjct: 57  LQKAFAGASKLFIITGPHYDNTLEIKQGK--NVADAARRAGVKH---IYSTGYAFA---E 108

Query: 188 ILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG---------GLRNEP------ 232
                             KL  E  IR +GI YT +R G         GL          
Sbjct: 109 ESAIPL---------AHVKLAVEYAIRTTGIPYTFLRNGLYTENFVSEGLPAADTGSGAI 159

Query: 233 --PTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS 277
             P G+  +         +++R+ +   A + L       K + ++S
Sbjct: 160 VLPAGDGPVP--------SVTRNDLGPAAAQLLKEEGHEGKTINLVS 198

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 18/165 (10%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           + + G  G  G+R+  QLLA+G+ V    R  +K           L    AD+T+     
Sbjct: 1   VLILGC-GYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLA---ADLTQ----- 51

Query: 129 SEAIGDDSEAVVCATGFQPGWDLFAPWK---AINLVEACRKR-GVNRFILISSILVNGAA 184
              +  D + +V +    P    +          L++A  +   V R I +SS  V G  
Sbjct: 52  -PGLLADVDHLVISLP--PPAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVYGDQ 108

Query: 185 MGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSG-INYTIIRPGGL 228
            G+ ++      N    +  A L+AEQ +   G    TI+R  G+
Sbjct: 109 QGEWVDETSP-PNPSTESGRALLEAEQALLALGSKPTTILRLAGI 152

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 47/177 (26%), Positives = 68/177 (38%), Gaps = 47/177 (26%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           KI + GATG  G+ +V  L  +G+ V               +   SL  +  D+T+  A 
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEV-----------IGTGRSRASLFKL--DLTDPDA- 46

Query: 128 LSEAIGDDSEAVV--CATGFQPG---WDLFAPWKAI--------NLVEACRKRGVNRFIL 174
           + EAI D    V+  CA   +      D   P  A         NL  A ++ G  R I 
Sbjct: 47  VEEAIRDYKPDVIINCAAYTRVDKCESD---PELAYRVNVLAPENLARAAKEVGA-RLIH 102

Query: 175 ISSILV-NGAAMGQILNPAY------IFLNVFGLTLIAKLQAEQYIRKSGINYTIIR 224
           IS+  V +G          Y        LNV+G +   KL  E  +  +   Y I+R
Sbjct: 103 ISTDYVFDGKK------GPYKEEDAPNPLNVYGKS---KLLGEVAVLNANPRYLILR 150

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 54/212 (25%), Positives = 76/212 (35%), Gaps = 57/212 (26%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPS----------LQIV 117
           KI V G  G  G   V QLL  G  V      LD     LS  +            +  V
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVI----LD----NLSNGSREALPRGERITPVTFV 52

Query: 118 KADVTEGSAKLSEAIGD-DSEAVVCATGFQP-GWDLFAPWK--------AINLVEACRKR 167
           + D+ +    L     +   +AV+   G    G  +  P K         +NL+EA ++ 
Sbjct: 53  EGDLRD-RELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQA 111

Query: 168 GVNRFILISSILVNGAAM------GQILNPAYIFLNVFGLTLIAKLQAEQYIR-----KS 216
           GV +FI  SS  V G            L P     N +G +   KL +EQ +R       
Sbjct: 112 GVKKFIFSSSAAVYGEPSSIPISEDSPLGPI----NPYGRS---KLMSEQILRDLQKADP 164

Query: 217 GINYTIIR--------PGGLRNE--PPTGNII 238
             +Y I+R        P G   E  P   ++I
Sbjct: 165 DWSYVILRYFNVAGAHPSGDIGEDPPGITHLI 196

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 39/177 (22%), Positives = 64/177 (36%), Gaps = 54/177 (30%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT-LSKDNPSLQIVKADVT--EG 124
           ++ V G  G  G  +VE+LL +G  V   + +L   K   L +  P+++ ++ D+   E 
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEV-IVLDNLSTGKKENLPEVKPNVKFIEGDIRDDEL 59

Query: 125 SAKLSE---------AIGDDSEAV--------VCATGFQPGWDLFAPWKAINLVEACRKR 167
                E         A      ++        V   G             +NL+EA RK 
Sbjct: 60  VEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGT------------LNLLEAARKA 107

Query: 168 GVNRFILISSILVNGAAMG----------QILNPAYIFLNVFGLTLIAKLQAEQYIR 214
           GV RF+  SS     +  G             NP    L+ + ++   K   E Y +
Sbjct: 108 GVKRFVYASS----SSVYGDPPYLPKDEDHPPNP----LSPYAVS---KYAGELYCQ 153

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 40.3 bits (94), Expect = 7e-04
 Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 15/120 (12%)

Query: 71  VAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSE 130
           V GA+G     +VEQLL +G+ V+A VRD  K K         L      +    A L++
Sbjct: 3   VTGASGFVASHVVEQLLERGYKVRATVRDPSKVK--KVNHLLDLDAKPGRLELAVADLTD 60

Query: 131 AIGDDSEAVVCATGFQPGWDLFAPWK------------AINLVEACRKRG-VNRFILISS 177
               D     CA  F     +    K             +N ++A      V RF+L SS
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRFVLTSS 120

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 16/121 (13%)

Query: 71  VAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT-----LSKDNPSLQIVKADVT-EG 124
           V GA+G  G  +V +LL +G+ V+A VRD    K       L      L + KAD+  EG
Sbjct: 10  VTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEG 69

Query: 125 SAKLSEAIGDDSEAVVCAT--GFQ---PGWDLFAPW--KAINLVEACRKRG-VNRFILIS 176
           S    +AI   +     AT   F+   P  ++  P     +++++AC K   V R +  S
Sbjct: 70  S--FDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTS 127

Query: 177 S 177
           S
Sbjct: 128 S 128

Length = 351

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 18/131 (13%)

Query: 63  SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKD--NPSLQIV 117
           S + K + V GA+G     +V+ LL +G+ VKA VRD +  K T   L+ D     L + 
Sbjct: 1   SGEGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLF 60

Query: 118 KAD-VTEGSAKLSEAIGDDSEAVV-CATGF-----QPGWDLFAPW--KAINLVEACRK-R 167
           KA+ + EGS    +++ D  E V   A+ F      P  +L  P     +N++ +C K  
Sbjct: 61  KANLLEEGSF---DSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVP 117

Query: 168 GVNRFILISSI 178
            V R ++ SS+
Sbjct: 118 SVKRVVVTSSM 128

Length = 322

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 45/177 (25%), Positives = 66/177 (37%), Gaps = 54/177 (30%)

Query: 64  VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE 123
           +  K + V G  GS G  +  Q+L              K     S+D   L ++  ++ E
Sbjct: 248 LTGKTVLVTGGGGSIGSELCRQILKFN----------PKEIILFSRDEYKLYLIDMELRE 297

Query: 124 --GSAKLSEAIGD--DSEAVVCA-TGFQPGWDL--------------FAPWKAI------ 158
                KL   IGD  D + V  A  G +   D+              + P +AI      
Sbjct: 298 KFPELKLRFYIGDVRDRDRVERAMEGHKV--DIVFHAAALKHVPLVEYNPEEAIKTNVLG 355

Query: 159 --NLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI 213
             N+ EA  K GV +F+LIS+         + +NP     NV G T   K  AE+  
Sbjct: 356 TENVAEAAIKNGVKKFVLIST--------DKAVNPT----NVMGAT---KRLAEKLF 397

Length = 588

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 40/185 (21%), Positives = 68/185 (36%), Gaps = 23/185 (12%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           K+ + GA+G  G+R+ E+LL+     +  +  +D          P +  +  D+      
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNER--LILIDVVSPKAPSGAPRVTQIAGDLAV--PA 57

Query: 128 LSEAIGDDSEAVV-CATGFQPGWDL--FAPWKAIN------LVEACRK-RGVNRFILISS 177
           L EA+ +    VV        G     F     +N      L+EA RK     RF+  SS
Sbjct: 58  LIEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPKPRFVFTSS 117

Query: 178 ILVNGAAM--GQILNPAYIFLNVFGLTLIAKLQAE----QYIRKSGINYTIIRPGGLRNE 231
           + V G  +      + A    + +G     K   E     Y R+  ++   +R   +   
Sbjct: 118 LAVYGLPLPNPVTDHTALDPASSYGA---QKAMCELLLNDYSRRGFVDGRTLRLPTVCVR 174

Query: 232 PPTGN 236
           P   N
Sbjct: 175 PGRPN 179

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 11/125 (8%)

Query: 64  VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKA 119
             +K   V G TG     +++ LL KG+AV   VRD +  K        ++   L+I  A
Sbjct: 7   TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGA 66

Query: 120 DVT-EGSAKLSEAIGDDSEAVVCATGFQ---PGWDLFAP--WKAINLVEACRK-RGVNRF 172
           D+T E S +   A  D    V     F    P  D+  P      N+++AC K + V R 
Sbjct: 67  DLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRV 126

Query: 173 ILISS 177
           IL SS
Sbjct: 127 ILTSS 131

Length = 338

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 39/178 (21%), Positives = 61/178 (34%), Gaps = 24/178 (13%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL--SKDNPSLQIVKADVTEGS 125
            + V GA G  G  + E+LL +G  V+A           L  +  +     +  DV    
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVR--D 58

Query: 126 AKLSEAIGDDSEAVV-CATGFQPGWDLFAPWKAI--------NLVEACRKRGVNRFILIS 176
           A   E +    + V   A      +   AP   +        N++EA       R +  S
Sbjct: 59  ASEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHTS 118

Query: 177 SILVNGAAMGQIL-----NPAYIFLNVFGLTLIAKLQAEQ----YIRKSGINYTIIRP 225
           +  V G    Q +     +P             +K  A++    Y R  G+  TIIRP
Sbjct: 119 TSEVYG--TAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRP 174

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 41/187 (21%), Positives = 68/187 (36%), Gaps = 34/187 (18%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD---LDKAKTTLSKDNPSLQIVKADVTE 123
           K   V  A+   G  I   L  +G  V    R+   L++A + L      +  V AD+T+
Sbjct: 2   KVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLTD 61

Query: 124 GSA--KLSEAIGDDS---EAVVCATG--------------FQPGWDL--FAPWKAINLV- 161
                +L E  GD     + +V   G              +   +DL   +  + +  V 
Sbjct: 62  PEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAVL 121

Query: 162 EACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF--GLTLIAKLQAEQYIRKSGIN 219
              ++RG  R + ISS+ V          P  +  NV   GL  + K  + +     G+ 
Sbjct: 122 PGMKERGWGRIVNISSLTV-KEPE-----PNLVLSNVARAGLIGLVKTLSRELAPD-GVT 174

Query: 220 YTIIRPG 226
              + PG
Sbjct: 175 VNSVLPG 181

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 43/192 (22%), Positives = 71/192 (36%), Gaps = 38/192 (19%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRD---LDKAKTTLSKDNPSLQIVKADVTEGS 125
           + + GA+   G+ +  +    G+ V    R    LD+ K  L   NPS+++   DVT+  
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 126 ------AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA------INL----------VEA 163
                 A+L   +G     ++ A   +        +KA       NL          +  
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALPQ 120

Query: 164 CRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAKLQAEQYIRKSGIN 219
            R +G    +LISS+    A  G     AY      L+    +L   +      +K GI 
Sbjct: 121 FRAKGRGHLVLISSVA---ALRGLPGAAAYSASKAALSSLAESLRYDV------KKRGIR 171

Query: 220 YTIIRPGGLRNE 231
            T+I PG +   
Sbjct: 172 VTVINPGFIDTP 183

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)

Query: 71  VAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLS 129
           V G +G  G+ +VEQLL +G   V   V D+          +  +Q    D+T+    L 
Sbjct: 4   VVGGSGFLGRHLVEQLLRRGNPTVH--VFDIRPTFELDPSSSGRVQFHTGDLTD-PQDLE 60

Query: 130 EAIGDDSEAVVCATG---FQPGWDLFAPWKAI---NLVEACRKRGVNRFILISS 177
           +A  +    VV  T         DL+         N++EACRK GV + +  SS
Sbjct: 61  KAFNEKGPNVVFHTASPDHGSNDDLYYKVNVQGTRNVIEACRKCGVKKLVYTSS 114

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 16/57 (28%), Positives = 31/57 (54%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE 123
           K + + G +   G  +   L A+G+ V A  R+ DK ++     N +L++++ DVT+
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTD 57

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 37.8 bits (89), Expect = 0.004
 Identities = 45/184 (24%), Positives = 64/184 (34%), Gaps = 54/184 (29%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           + V G  GS G  +  Q+L         +    + +  L +    L+    D      KL
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKK---IILFSRDEFKLYEIRQELRQEYND-----PKL 52

Query: 129 SEAIGD--DSEAVVCA-TGFQPGWDL--------------FAPWKAI--------NLVEA 163
              IGD  D E +  A        D               + P +AI        N+ EA
Sbjct: 53  RFFIGDVRDRERLERAMEQHGV--DTVFHAAALKHVPLVEYNPMEAIKTNVLGTENVAEA 110

Query: 164 CRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI----RKSGIN 219
             + GV +F+LIS+   + A      NP     NV G T   K  AE+      R+SG  
Sbjct: 111 AIENGVEKFVLIST---DKAV-----NPT----NVMGAT---KRLAEKLFQAANRESGSG 155

Query: 220 YTII 223
            T  
Sbjct: 156 KTRF 159

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.9 bits (89), Expect = 0.004
 Identities = 55/245 (22%), Positives = 86/245 (35%), Gaps = 50/245 (20%)

Query: 63  SVKQKKIFVAGATGSSGKRIVEQLLAKGFAV----KAGVRDLDKAKTTLSKDNPSLQIVK 118
           S+  +   V GA    G+ I  +L   G  V    ++     ++    +       Q V+
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 119 ADVTEGSAKLSEAIGDDSEA------VVCATG-FQPG---------WD------LFAPWK 156
           ADVT+ +A L  A+    E       +V   G F+           WD      L   + 
Sbjct: 63  ADVTDKAA-LEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVF- 120

Query: 157 AINLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV--FGLT-LIAKLQA 209
             +L+ A     RK+   R + ISS+       G+     Y        GLT  +A+  A
Sbjct: 121 --HLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRS---NYAAAKAGLVGLTKALARELA 175

Query: 210 EQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISR----DQVAEVAVEALLH 265
           E      GI   ++ PG +  +     I    E    E  + R    + +A  AV  L  
Sbjct: 176 E-----YGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIAR-AVAFLCS 229

Query: 266 PESSY 270
             S Y
Sbjct: 230 DASDY 234

Length = 249

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 31/178 (17%)

Query: 69  IFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           I V GA G  G+ +  +L A      V      LD+ +   S   P ++ V+ D+     
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDG----LDRRRPPGSP--PKVEYVRLDIR--DP 52

Query: 127 KLSEAIGD-DSEAVV-CATGFQPGWDLFAPWK-----AINLVEACRKRGVNRFILISSIL 179
             ++   + +++AVV  A    P  D     +       N+++AC   GV R ++ SS+ 
Sbjct: 53  AAADVFREREADAVVHLAFILDPPRDGAERHRINVDGTQNVLDACAAAGVPRVVVTSSVA 112

Query: 180 VNGAAMGQILNPAYIFLN--VFGLTLIA----KLQAEQYI-----RKSGINYTIIRPG 226
           V GA      NPA +  +  + G    A    K + EQ +     R   +N T++RP 
Sbjct: 113 VYGAHPD---NPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPA 167

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 29/157 (18%)

Query: 63  SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKA 119
            ++ +   V GA    G+ I  +L A G  V       D A  T   +       +  + 
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQV 62

Query: 120 DVTEGSAKLSEAIGDDSEA-----VVCA----TGFQPGWDL-FAPWKAI---------NL 160
           DV +  A L  A+    E      ++ A        P  ++    W+ +          L
Sbjct: 63  DVRD-RAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLL 121

Query: 161 VEAC----RKRGVNRFILISSILVNGAAMGQILNPAY 193
            +A      + G  R +L SS  V G  +G      Y
Sbjct: 122 TQAALPALIRAGGGRIVLTSS--VAGPRVGYPGLAHY 156

Length = 251

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 13/125 (10%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT-----LSKDNPSLQIVKAD- 120
           K + V GA+G     IV+ LL +G+ + A VRD    K T     L      L++ KAD 
Sbjct: 6   KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADL 65

Query: 121 VTEGSAKLS----EAIGDDSEAVVCATGFQPGWDLFAPW--KAINLVEACRK-RGVNRFI 173
           + EGS +L+    E +   +  V       P  +L  P     IN++  C K   V R I
Sbjct: 66  LDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVI 125

Query: 174 LISSI 178
           L SS+
Sbjct: 126 LTSSM 130

Length = 325

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	296
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	100.0
PLN02427	386	UDP-apiose/xylose synthase	99.98
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.97
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.97
PLN02214	342	cinnamoyl-CoA reductase	99.97
CHL00194	317	ycf39 Ycf39; Provisional	99.97
PLN02572	442	UDP-sulfoquinovose synthase	99.97
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.97
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.96
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.96
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN00198	338	anthocyanidin reductase; Provisional	99.96
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.96
PLN02650	351	dihydroflavonol-4-reductase	99.96
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.96
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.96
PLN02206	442	UDP-glucuronate decarboxylase	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
PLN02653	340	GDP-mannose 4,6-dehydratase	99.96
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.96
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.96
PLN02686	367	cinnamoyl-CoA reductase	99.96
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.96
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.96
PLN00016	378	RNA-binding protein; Provisional	99.96
PLN02583	297	cinnamoyl-CoA reductase	99.96
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.95
PLN03209	576	translocon at the inner envelope of chloroplast su	99.95
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.95
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.95
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.95
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.95
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.95
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.95
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.94
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.94
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.94
PLN02996	491	fatty acyl-CoA reductase	99.94
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.94
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.93
PRK05865	854	hypothetical protein; Provisional	99.93
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.93
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.93
PRK08263	275	short chain dehydrogenase; Provisional	99.92
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.92
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.92
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.92
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.91
PRK06482	276	short chain dehydrogenase; Provisional	99.91
PLN02778	298	3,5-epimerase/4-reductase	99.91
PRK05875	276	short chain dehydrogenase; Provisional	99.91
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK07825	273	short chain dehydrogenase; Provisional	99.9
PRK06180	277	short chain dehydrogenase; Provisional	99.9
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.9
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.9
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.9
PRK06914	280	short chain dehydrogenase; Provisional	99.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.9
PRK07074	257	short chain dehydrogenase; Provisional	99.89
PRK06182	273	short chain dehydrogenase; Validated	99.89
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.89
PRK12828	239	short chain dehydrogenase; Provisional	99.89
PLN02503	605	fatty acyl-CoA reductase 2	99.89
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.89
PRK06138	252	short chain dehydrogenase; Provisional	99.89
PRK05876	275	short chain dehydrogenase; Provisional	99.89
PRK06196	315	oxidoreductase; Provisional	99.89
PRK10538	248	malonic semialdehyde reductase; Provisional	99.89
PRK08339	263	short chain dehydrogenase; Provisional	99.89
PRK06179	270	short chain dehydrogenase; Provisional	99.89
PRK08219	227	short chain dehydrogenase; Provisional	99.89
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.89
PRK12320	699	hypothetical protein; Provisional	99.89
PRK07067	257	sorbitol dehydrogenase; Provisional	99.89
PRK09186	256	flagellin modification protein A; Provisional	99.89
PRK07806	248	short chain dehydrogenase; Provisional	99.89
PRK07775	274	short chain dehydrogenase; Provisional	99.89
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.89
PRK05993	277	short chain dehydrogenase; Provisional	99.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.89
PRK07454	241	short chain dehydrogenase; Provisional	99.89
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.88
PRK07060	245	short chain dehydrogenase; Provisional	99.88
PRK07063	260	short chain dehydrogenase; Provisional	99.88
PRK08265	261	short chain dehydrogenase; Provisional	99.88
PRK05717	255	oxidoreductase; Validated	99.88
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.88
PRK06841	255	short chain dehydrogenase; Provisional	99.88
PRK07024	257	short chain dehydrogenase; Provisional	99.88
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.88
PRK06139	330	short chain dehydrogenase; Provisional	99.88
PRK06523	260	short chain dehydrogenase; Provisional	99.88
PRK07478	254	short chain dehydrogenase; Provisional	99.88
PRK07109	334	short chain dehydrogenase; Provisional	99.88
PRK06114	254	short chain dehydrogenase; Provisional	99.88
PRK09291	257	short chain dehydrogenase; Provisional	99.88
PRK05866	293	short chain dehydrogenase; Provisional	99.88
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.88
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.88
PRK08628	258	short chain dehydrogenase; Provisional	99.87
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.87
PRK08589	272	short chain dehydrogenase; Validated	99.87
PLN02253	280	xanthoxin dehydrogenase	99.87
PRK09134	258	short chain dehydrogenase; Provisional	99.87
PRK12746	254	short chain dehydrogenase; Provisional	99.87
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.87
PRK07774	250	short chain dehydrogenase; Provisional	99.87
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06128	300	oxidoreductase; Provisional	99.87
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.87
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06398	258	aldose dehydrogenase; Validated	99.87
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.87
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.87
PRK07890	258	short chain dehydrogenase; Provisional	99.87
PRK07904	253	short chain dehydrogenase; Provisional	99.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK05650	270	short chain dehydrogenase; Provisional	99.87
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.87
PRK12939	250	short chain dehydrogenase; Provisional	99.87
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.87
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.86
PRK07035	252	short chain dehydrogenase; Provisional	99.86
PRK12829	264	short chain dehydrogenase; Provisional	99.86
PRK12827	249	short chain dehydrogenase; Provisional	99.86
PRK08267	260	short chain dehydrogenase; Provisional	99.86
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.86
PRK08264	238	short chain dehydrogenase; Validated	99.86
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.86
PRK07102	243	short chain dehydrogenase; Provisional	99.86
PRK05867	253	short chain dehydrogenase; Provisional	99.86
PRK07062	265	short chain dehydrogenase; Provisional	99.86
PRK09135	249	pteridine reductase; Provisional	99.86
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.86
PRK06483	236	dihydromonapterin reductase; Provisional	99.86
PRK05872	296	short chain dehydrogenase; Provisional	99.86
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.86
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.86
PRK07577	234	short chain dehydrogenase; Provisional	99.86
PRK06701	290	short chain dehydrogenase; Provisional	99.86
PRK07985	294	oxidoreductase; Provisional	99.86
PRK07856	252	short chain dehydrogenase; Provisional	99.86
PRK09242	257	tropinone reductase; Provisional	99.86
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.86
PRK06194	287	hypothetical protein; Provisional	99.86
PRK06172	253	short chain dehydrogenase; Provisional	99.85
PRK07326	237	short chain dehydrogenase; Provisional	99.85
PRK06181	263	short chain dehydrogenase; Provisional	99.85
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK08643	256	acetoin reductase; Validated	99.85
PRK08251	248	short chain dehydrogenase; Provisional	99.85
PRK06101	240	short chain dehydrogenase; Provisional	99.85
PRK09072	263	short chain dehydrogenase; Provisional	99.85
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.85
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PLN02260	668	probable rhamnose biosynthetic enzyme	99.85
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.85
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK06949	258	short chain dehydrogenase; Provisional	99.85
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.85
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.85
PRK08324	681	short chain dehydrogenase; Validated	99.85
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.85
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK07814	263	short chain dehydrogenase; Provisional	99.84
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.84
PRK07023	243	short chain dehydrogenase; Provisional	99.84
PRK12747	252	short chain dehydrogenase; Provisional	99.84
PRK05693	274	short chain dehydrogenase; Provisional	99.84
PRK08017	256	oxidoreductase; Provisional	99.84
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.84
PRK06924	251	short chain dehydrogenase; Provisional	99.84
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.84
PRK08278	273	short chain dehydrogenase; Provisional	99.84
PRK06125	259	short chain dehydrogenase; Provisional	99.84
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK12743	256	oxidoreductase; Provisional	99.84
PRK06057	255	short chain dehydrogenase; Provisional	99.83
PRK12937	245	short chain dehydrogenase; Provisional	99.83
PRK07576	264	short chain dehydrogenase; Provisional	99.83
PRK07791	286	short chain dehydrogenase; Provisional	99.83
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.83
PRK06500	249	short chain dehydrogenase; Provisional	99.83
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.83
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.83
PRK06484	520	short chain dehydrogenase; Validated	99.83
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.83
PRK07041	230	short chain dehydrogenase; Provisional	99.83
PRK06197	306	short chain dehydrogenase; Provisional	99.83
PRK08226	263	short chain dehydrogenase; Provisional	99.83
PRK07831	262	short chain dehydrogenase; Provisional	99.83
PRK05855	582	short chain dehydrogenase; Validated	99.83
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK06123	248	short chain dehydrogenase; Provisional	99.83
PRK12742	237	oxidoreductase; Provisional	99.83
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.82
PRK07201	657	short chain dehydrogenase; Provisional	99.82
PRK07677	252	short chain dehydrogenase; Provisional	99.82
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK05854	313	short chain dehydrogenase; Provisional	99.82
PRK08703	239	short chain dehydrogenase; Provisional	99.82
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.82
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.82
PRK06198	260	short chain dehydrogenase; Provisional	99.82
PLN02780	320	ketoreductase/ oxidoreductase	99.82
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.82
PRK12744	257	short chain dehydrogenase; Provisional	99.82
PRK05599	246	hypothetical protein; Provisional	99.82
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.82
PRK07069	251	short chain dehydrogenase; Validated	99.82
PRK07832	272	short chain dehydrogenase; Provisional	99.82
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.82
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.81
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.81
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.81
COG2910	211	Putative NADH-flavin reductase [General function p	99.81
PRK08303	305	short chain dehydrogenase; Provisional	99.81
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.81
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.81
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.8
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK12367	245	short chain dehydrogenase; Provisional	99.8
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK05884	223	short chain dehydrogenase; Provisional	99.79
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
KOG0725	270	consensus Reductases with broad range of substrate	99.79
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.79
PRK07578	199	short chain dehydrogenase; Provisional	99.79
PRK08862	227	short chain dehydrogenase; Provisional	99.79
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.79
PRK06484	520	short chain dehydrogenase; Validated	99.78
PRK06940	275	short chain dehydrogenase; Provisional	99.78
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.77
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.76
PRK08177	225	short chain dehydrogenase; Provisional	99.76
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.76
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.76
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.76
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.76
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.76
PRK06953	222	short chain dehydrogenase; Provisional	99.76
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.75
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.74
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.74
PLN00015	308	protochlorophyllide reductase	99.73
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.72
KOG1208	314	consensus Dehydrogenases with different specificit	99.72
KOG2774	366	consensus NAD dependent epimerase [General functio	99.7
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.69
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.67
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.67
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.67
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.66
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.66
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.64
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.64
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.63
COG1028	251	FabG Dehydrogenases with different specificities (	99.61
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.57
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.56
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.56
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.55
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.53
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.46
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.41
PRK06720	169	hypothetical protein; Provisional	99.41
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.33
PRK08309	177	short chain dehydrogenase; Provisional	99.25
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.23
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.21
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.17
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.09
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.08
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.03
PTZ00325	321	malate dehydrogenase; Provisional	98.96
PRK09620	229	hypothetical protein; Provisional	98.9
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.9
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.85
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.81
PLN00106	323	malate dehydrogenase	98.8
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.72
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.7
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.66
PRK05086	312	malate dehydrogenase; Provisional	98.58
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.58
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.55
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.55
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.51
PRK14982	340	acyl-ACP reductase; Provisional	98.43
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.35
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.34
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.23
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.22
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.2
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.16
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.14
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.13
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.01
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	98.0
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	98.0
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	98.0
PRK09496	453	trkA potassium transporter peripheral membrane com	98.0
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.97
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.95
COG3268	382	Uncharacterized conserved protein [Function unknow	97.94
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.92
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.9
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.87
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.83
PRK09496	453	trkA potassium transporter peripheral membrane com	97.83
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.82
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.8
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.77
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.77
PRK04148	134	hypothetical protein; Provisional	97.75
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.75
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.71
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.71
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.71
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.7
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.68
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.66
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.65
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.65
PRK05442	326	malate dehydrogenase; Provisional	97.65
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.64
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.63
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.62
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.61
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.6
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.59
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.58
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.57
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.56
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.56
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.56
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.56
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.53
PTZ00117	319	malate dehydrogenase; Provisional	97.52
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.52
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.51
PRK08223	287	hypothetical protein; Validated	97.48
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.47
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.46
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.46
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.45
PRK06223	307	malate dehydrogenase; Reviewed	97.44
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.43
PRK08328	231	hypothetical protein; Provisional	97.43
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.42
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.4
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.38
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.38
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.37
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.37
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.36
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	97.36
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.35
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.34
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.34
PRK10669	558	putative cation:proton antiport protein; Provision	97.34
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.33
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.33
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.33
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.32
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.32
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.32
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.32
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.32
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.31
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.31
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.3
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.29
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.29
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.27
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.26
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.25
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.25
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.25
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.23
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.23
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.23
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.22
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.22
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.22
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.21
PLN02602	350	lactate dehydrogenase	97.21
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.2
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.2
PLN02928	347	oxidoreductase family protein	97.19
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.19
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.19
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.19
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	97.18
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.15
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.14
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.13
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.13
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.12
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.11
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.09
PLN00203	519	glutamyl-tRNA reductase	97.09
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	97.06
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.03
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.03
PLN02383	344	aspartate semialdehyde dehydrogenase	97.02
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.02
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	97.01
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.99
PRK13243	333	glyoxylate reductase; Reviewed	96.99
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.98
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.96
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.95
PRK07411	390	hypothetical protein; Validated	96.93
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.93
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.89
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.89
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.89
PRK14852	989	hypothetical protein; Provisional	96.88
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.88
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.87
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.87
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.86
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.86
PRK14851	679	hypothetical protein; Provisional	96.85
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.85
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.83
PRK08655	437	prephenate dehydrogenase; Provisional	96.83
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.83
PRK06849	389	hypothetical protein; Provisional	96.8
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	96.8
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.8
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.79
PRK06436	303	glycerate dehydrogenase; Provisional	96.78
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.78
PRK07574	385	formate dehydrogenase; Provisional	96.77
PRK07877	722	hypothetical protein; Provisional	96.76
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.76
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.76
PLN02494	477	adenosylhomocysteinase	96.75
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.74
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.72
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.72
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.72
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.72
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.71
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.71
PRK06487	317	glycerate dehydrogenase; Provisional	96.71
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.7
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.7
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.69
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.69
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.69
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.69
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.68
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.67
PRK06932	314	glycerate dehydrogenase; Provisional	96.66
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.66
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	96.65
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.65
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.64
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.64
PRK12480	330	D-lactate dehydrogenase; Provisional	96.63
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.63
PLN02306	386	hydroxypyruvate reductase	96.63
PRK05562	223	precorrin-2 dehydrogenase; Provisional	96.62
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.62
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.61
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.59
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.59
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.59
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.58

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=9.7e-34  Score=234.64  Aligned_cols=222  Identities=22%  Similarity=0.250  Sum_probs=174.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |+||||||+|+||+|.+.+|++.|++|++++.-.....+.+.  ...+.++++|+.| .+.+.+.|.+ ++|+|||+||.
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~--~~~~~f~~gDi~D-~~~L~~vf~~~~idaViHFAa~   77 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL--KLQFKFYEGDLLD-RALLTAVFEENKIDAVVHFAAS   77 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh--hccCceEEecccc-HHHHHHHHHhcCCCEEEECccc
Confidence            589999999999999999999999999998876555444332  1127999999999 8999999987 89999999996


Q ss_pred             CCCCCC----cchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH-
Q 022495          146 QPGWDL----FAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-  215 (296)
Q Consensus       146 ~~~~~~----~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-  215 (296)
                      ..-.+.    ..++..     .+++++|++.++++|||.||.++||.....+..|+ .+..|.++||.||.+.|++++. 
T Consensus        78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~-~~~~p~NPYG~sKlm~E~iL~d~  156 (329)
T COG1087          78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISET-SPLAPINPYGRSKLMSEEILRDA  156 (329)
T ss_pred             cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCC-CCCCCCCcchhHHHHHHHHHHHH
Confidence            543332    222222     99999999999999999999999998877555554 4666899999999999998864 


Q ss_pred             ---hCCcEEEEecCcccCCCCCCce--------------------------eecccCcc-----ccCCcCHHHHHHHHHH
Q 022495          216 ---SGINYTIIRPGGLRNEPPTGNI--------------------------IMETEDTL-----YEGTISRDQVAEVAVE  261 (296)
Q Consensus       216 ---~~~~~~~lrp~~i~g~~~~~~~--------------------------~~~~~~~~-----~~~~i~~~Dva~~i~~  261 (296)
                         ++++++++|.+++.|....+.+                          ++...-+.     ...+||+.|+|++.+.
T Consensus       157 ~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~  236 (329)
T COG1087         157 AKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVL  236 (329)
T ss_pred             HHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHH
Confidence               6899999999999987544331                          11111111     1358999999999999


Q ss_pred             HhcCCCCCC--CeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          262 ALLHPESSY--KVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       262 ~l~~~~~~~--~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +++.-...+  .+||+++   |...|+.|+++.+++
T Consensus       237 Al~~L~~~g~~~~~NLG~---G~G~SV~evi~a~~~  269 (329)
T COG1087         237 ALKYLKEGGSNNIFNLGS---GNGFSVLEVIEAAKK  269 (329)
T ss_pred             HHHHHHhCCceeEEEccC---CCceeHHHHHHHHHH
Confidence            987533222  5888888   899999999998865

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=5.8e-32  Score=240.51  Aligned_cols=227  Identities=14%  Similarity=0.122  Sum_probs=169.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh----ccc----CCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLS----KDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      .+++|+||||||+||||++|+++|+++|++|++++|.......    ...    ....++.++.+|++| .+.+.+++++
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~l~~~~~~   90 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK-FTDCQKACKN   90 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC-HHHHHHHhhC
Confidence            4567999999999999999999999999999999986542211    110    011358899999999 8889999998


Q ss_pred             CCCEEEEcCCCCCCCC----Ccchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHH
Q 022495          135 DSEAVVCATGFQPGWD----LFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA  205 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~----~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s  205 (296)
                       +|+|||+|+......    .....  +.   .+++++|++.++++|||+||..+||.....+..++ .+..|.+.|+.+
T Consensus        91 -~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-~~~~p~~~Y~~s  168 (348)
T PRK15181         91 -VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-RIGRPLSPYAVT  168 (348)
T ss_pred             -CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-CCCCCCChhhHH
Confidence             999999998643211    11111  11   89999999999999999999999986544333332 234567789999


Q ss_pred             HHHHHHHHH----HhCCcEEEEecCcccCCCCCCc-----e--------------eecccCccccCCcCHHHHHHHHHHH
Q 022495          206 KLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN-----I--------------IMETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       206 K~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~-----~--------------~~~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      |.++|.+++    +.+++++++||+.+||+.....     +              ...+.......++|++|+|++++.+
T Consensus       169 K~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~  248 (348)
T PRK15181        169 KYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLS  248 (348)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHH
Confidence            999998764    4589999999999999853211     0              1111222334689999999999887


Q ss_pred             hcCCC--CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          263 LLHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +..+.  ..+.+||+++   +..+++.|+++.+.+
T Consensus       249 ~~~~~~~~~~~~yni~~---g~~~s~~e~~~~i~~  280 (348)
T PRK15181        249 ATTNDLASKNKVYNVAV---GDRTSLNELYYLIRD  280 (348)
T ss_pred             HhcccccCCCCEEEecC---CCcEeHHHHHHHHHH
Confidence            75432  3467999998   688999999999864

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=100.00  E-value=7.6e-31  Score=223.12  Aligned_cols=231  Identities=81%  Similarity=1.221  Sum_probs=181.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHh-cCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI-GDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~~~d~vv~~  142 (296)
                      ..+|+|+||||+|+||+.++++|+++|++|+++.|++++...... ...+++++.+|++|..+.+.+.+ .+ +|+||++
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~l~~~~~~~-~d~vi~~   92 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-QDPSLQIVRADVTEGSDKLVEAIGDD-SDAVICA   92 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-cCCceEEEEeeCCCCHHHHHHHhhcC-CCEEEEC
Confidence            357899999999999999999999999999999999877654432 23478999999998335677777 57 9999999


Q ss_pred             CCCCCCCCCcch-----hHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhC
Q 022495          143 TGFQPGWDLFAP-----WKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSG  217 (296)
Q Consensus       143 ag~~~~~~~~~~-----~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~  217 (296)
                      +|..........     ....++++++++.++++||++||+++|+...+.+..+.+...+++..|...|..+|+++++.+
T Consensus        93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g  172 (251)
T PLN00141         93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSG  172 (251)
T ss_pred             CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcC
Confidence            986433221111     123899999999999999999999999865444444444445566667788999999999999


Q ss_pred             CcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhcC
Q 022495          218 INYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQR  296 (296)
Q Consensus       218 ~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~~  296 (296)
                      +++++||||+++++...+.+........+.++++++|+|++++.++..+...+.++.+.+.+++...+++++...++++
T Consensus       173 i~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (251)
T PLN00141        173 INYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQK  251 (251)
T ss_pred             CcEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhcC
Confidence            9999999999998765555444333333456899999999999999988877788999987777789999999998874

>PLN02427 UDP-apiose/xylose synthase

Probab=99.98  E-value=8e-31  Score=236.47  Aligned_cols=226  Identities=17%  Similarity=0.176  Sum_probs=165.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccC----CCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      .+.|+||||||+||||++|++.|+++ |++|++++|+.++...+...    ...+++++.+|++| .+.+.+++++ +|+
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~-~d~   89 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH-DSRLEGLIKM-ADL   89 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC-hHHHHHHhhc-CCE
Confidence            45679999999999999999999998 59999999886654432211    12469999999999 8999999999 999


Q ss_pred             EEEcCCCCCCCC----Ccch--hHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh---------------h
Q 022495          139 VVCATGFQPGWD----LFAP--WKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY---------------I  194 (296)
Q Consensus       139 vv~~ag~~~~~~----~~~~--~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~---------------~  194 (296)
                      |||+|+......    ....  .+.   .+++++|++.+ ++|||+||..+||...+....++.               .
T Consensus        90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~  168 (386)
T PLN02427         90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES  168 (386)
T ss_pred             EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence            999998643211    1111  111   78899998887 799999999999864332111110               0


Q ss_pred             h------hhhhHHHHHHHHHHHHHHHH----hCCcEEEEecCcccCCCCCC------------ce--------------e
Q 022495          195 F------LNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTG------------NI--------------I  238 (296)
Q Consensus       195 ~------~~~~~~y~~sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~~~------------~~--------------~  238 (296)
                      +      .++.+.|+.+|.++|+++..    ++++++++||+++||+....            .+              .
T Consensus       169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  248 (386)
T PLN02427        169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLK  248 (386)
T ss_pred             ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeE
Confidence            0      12345799999999998853    58999999999999985310            00              0


Q ss_pred             ecccCccccCCcCHHHHHHHHHHHhcCCC-CCCCeEEEEeCCCC-CCCCHHHHHHHhhc
Q 022495          239 METEDTLYEGTISRDQVAEVAVEALLHPE-SSYKVVEIISRVDA-PKRSYEDLFGSIKQ  295 (296)
Q Consensus       239 ~~~~~~~~~~~i~~~Dva~~i~~~l~~~~-~~~~~~~i~~~~~~-~~~~~~el~~~i~~  295 (296)
                      ..+.......++|++|+|++++.+++++. ..+++||+++   + ..+++.|+++.+.+
T Consensus       249 ~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~---~~~~~s~~el~~~i~~  304 (386)
T PLN02427        249 LVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGN---PNNEVTVRQLAEMMTE  304 (386)
T ss_pred             EECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCC---CCCCccHHHHHHHHHH
Confidence            01111222468999999999999998764 3567899987   5 58999999998864

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=3e-30  Score=219.48  Aligned_cols=224  Identities=23%  Similarity=0.266  Sum_probs=167.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh-----cccCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      .+++|+||||+||||++|++.|+++||.|+++.|+++..+.     .+.....+...+.+|+.| .+++.+++++ ||+|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d-~~sf~~ai~g-cdgV   82 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLD-EGSFDKAIDG-CDGV   82 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccc-cchHHHHHhC-CCEE
Confidence            47899999999999999999999999999999999987332     122244569999999999 8999999999 9999


Q ss_pred             EEcCCCCCCCCCc-----chhHH---HHHHHHHHHcC-CCEEEEEccceeccCc---cC--ccCChhhh-----hhhhhH
Q 022495          140 VCATGFQPGWDLF-----APWKA---INLVEACRKRG-VNRFILISSILVNGAA---MG--QILNPAYI-----FLNVFG  200 (296)
Q Consensus       140 v~~ag~~~~~~~~-----~~~~~---~~~l~~~~~~~-~~~iV~~SS~~~~~~~---~~--~~~~~~~~-----~~~~~~  200 (296)
                      ||+|.........     ....+   .|++++|++.. ++||||+||+++-...   .+  ...++...     -..--.
T Consensus        83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~  162 (327)
T KOG1502|consen   83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKL  162 (327)
T ss_pred             EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHH
Confidence            9999864432221     11111   99999999998 9999999999864322   11  12222211     111226


Q ss_pred             HHHHHHHHHHHH----HHHhCCcEEEEecCcccCCCCCCcee-------------ecccCccccCCcCHHHHHHHHHHHh
Q 022495          201 LTLIAKLQAEQY----IRKSGINYTIIRPGGLRNEPPTGNII-------------METEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       201 ~y~~sK~~~e~~----~~~~~~~~~~lrp~~i~g~~~~~~~~-------------~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      .|..+|..+|+.    .++.+++.+.|.|+.|+||......-             .......+..++|++|+|.+++.++
T Consensus       163 ~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~  242 (327)
T KOG1502|consen  163 WYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLAL  242 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHH
Confidence            799999999864    45678999999999999986544210             1112233345899999999999999


Q ss_pred             cCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          264 LHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       264 ~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.+...| .|.+.+    ...++.|+++.+.+
T Consensus       243 E~~~a~G-Ryic~~----~~~~~~ei~~~l~~  269 (327)
T KOG1502|consen  243 EKPSAKG-RYICVG----EVVSIKEIADILRE  269 (327)
T ss_pred             cCcccCc-eEEEec----CcccHHHHHHHHHH
Confidence            9999876 566665    45569999988865

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.97  E-value=2.4e-30  Score=230.25  Aligned_cols=222  Identities=14%  Similarity=0.216  Sum_probs=166.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccC-CChHHHHHHhcCCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT-EGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +|+||||||+||||++|+++|+++ |++|++++|+..+.....  ...+++++.+|++ + .+.+.+++++ +|+|||+|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~--~~~~~~~~~~Dl~~~-~~~~~~~~~~-~d~ViH~a   76 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV--NHPRMHFFEGDITIN-KEWIEYHVKK-CDVILPLV   76 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc--cCCCeEEEeCCCCCC-HHHHHHHHcC-CCEEEECc
Confidence            368999999999999999999987 699999998765544333  2246999999998 5 6778888888 99999999


Q ss_pred             CCCCC----CCCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh------hhhhHHHHHHHHH
Q 022495          144 GFQPG----WDLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF------LNVFGLTLIAKLQ  208 (296)
Q Consensus       144 g~~~~----~~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~------~~~~~~y~~sK~~  208 (296)
                      +....    .++...+.     ..+++++|++.+ ++|||+||..+||...+.+..++..+      .++.+.|+.+|.+
T Consensus        77 a~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~  155 (347)
T PRK11908         77 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQL  155 (347)
T ss_pred             ccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHH
Confidence            85332    11111111     189999999988 79999999999986554444443321      2456689999999


Q ss_pred             HHHHHH----HhCCcEEEEecCcccCCCCCC---------ce--------------eecccCccccCCcCHHHHHHHHHH
Q 022495          209 AEQYIR----KSGINYTIIRPGGLRNEPPTG---------NI--------------IMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       209 ~e~~~~----~~~~~~~~lrp~~i~g~~~~~---------~~--------------~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      +|++++    +++++++++||+.+||+....         .+              ...........++|++|++++++.
T Consensus       156 ~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~  235 (347)
T PRK11908        156 MDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMK  235 (347)
T ss_pred             HHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHH
Confidence            998775    368999999999999975321         00              011112233469999999999999


Q ss_pred             HhcCCC--CCCCeEEEEeCCCC-CCCCHHHHHHHhhc
Q 022495          262 ALLHPE--SSYKVVEIISRVDA-PKRSYEDLFGSIKQ  295 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~~~~~-~~~~~~el~~~i~~  295 (296)
                      ++..+.  ..+++||+++   + ..++++|+++.|.+
T Consensus       236 ~~~~~~~~~~g~~yni~~---~~~~~s~~e~~~~i~~  269 (347)
T PRK11908        236 IIENKDGVASGKIYNIGN---PKNNHSVRELANKMLE  269 (347)
T ss_pred             HHhCccccCCCCeEEeCC---CCCCcCHHHHHHHHHH
Confidence            998763  3567999987   4 57999999999864

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.97  E-value=2.6e-30  Score=222.16  Aligned_cols=221  Identities=21%  Similarity=0.263  Sum_probs=162.7

Q ss_pred             EEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCCC
Q 022495           70 FVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQP  147 (296)
Q Consensus        70 lVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~  147 (296)
                      |||||+||||++|+++|+++|  ++|+++++.+..............+++++|++| .+++.+++++ +|+|||+|+...
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d-~~~l~~a~~g-~d~V~H~Aa~~~   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITD-PESLEEALEG-VDVVFHTAAPVP   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEecccc-HHHHHHHhcC-CceEEEeCcccc
Confidence            699999999999999999999  799999987754331111122334499999999 8999999999 999999998654


Q ss_pred             CCCCc--c-hhHH-----HHHHHHHHHcCCCEEEEEccceeccCcc-C-ccC--Chhh-hhhhhhHHHHHHHHHHHHHHH
Q 022495          148 GWDLF--A-PWKA-----INLVEACRKRGVNRFILISSILVNGAAM-G-QIL--NPAY-IFLNVFGLTLIAKLQAEQYIR  214 (296)
Q Consensus       148 ~~~~~--~-~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~-~-~~~--~~~~-~~~~~~~~y~~sK~~~e~~~~  214 (296)
                      .+...  + .+..     ++++++|++.++++|||+||.++++... + ...  ++.. .+..+...|+.||+.+|+++.
T Consensus        79 ~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~  158 (280)
T PF01073_consen   79 PWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVL  158 (280)
T ss_pred             ccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHH
Confidence            43311  1 1221     9999999999999999999999987621 1 111  1211 123356789999999999885


Q ss_pred             H-h--------CCcEEEEecCcccCCCCCCc-------------eeecccCccccCCcCHHHHHHHHHHHhc---C----
Q 022495          215 K-S--------GINYTIIRPGGLRNEPPTGN-------------IIMETEDTLYEGTISRDQVAEVAVEALL---H----  265 (296)
Q Consensus       215 ~-~--------~~~~~~lrp~~i~g~~~~~~-------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~---~----  265 (296)
                      + .        .+++++|||..|||+.....             ....+......++++++|+|++++.+..   .    
T Consensus       159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~  238 (280)
T PF01073_consen  159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKP  238 (280)
T ss_pred             hhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcccccc
Confidence            4 2        28899999999999864321             1112223344679999999999987754   2    


Q ss_pred             CCCCCCeEEEEeCCCCCCCC-HHHHHHHhhc
Q 022495          266 PESSYKVVEIISRVDAPKRS-YEDLFGSIKQ  295 (296)
Q Consensus       266 ~~~~~~~~~i~~~~~~~~~~-~~el~~~i~~  295 (296)
                      ....|+.|++.+   +++.. +.|++..+.+
T Consensus       239 ~~~~G~~y~itd---~~p~~~~~~f~~~~~~  266 (280)
T PF01073_consen  239 ERVAGQAYFITD---GEPVPSFWDFMRPLWE  266 (280)
T ss_pred             ccCCCcEEEEEC---CCccCcHHHHHHHHHH
Confidence            346789999999   68888 9999877754

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02214 cinnamoyl-CoA reductase

Probab=99.97  E-value=1.8e-29  Score=223.88  Aligned_cols=224  Identities=21%  Similarity=0.255  Sum_probs=165.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh----cccCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      +++|+|+||||+||||++++++|+++|++|++++|+.+....    .+.....+++++.+|++| .+.+.+++++ +|+|
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~V   85 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD-YEALKAAIDG-CDGV   85 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC-hHHHHHHHhc-CCEE
Confidence            357899999999999999999999999999999998654221    111112368899999999 8999999999 9999


Q ss_pred             EEcCCCCCCCCCcc--hhHH---HHHHHHHHHcCCCEEEEEccc-eeccCccC---ccCChhh-----hhhhhhHHHHHH
Q 022495          140 VCATGFQPGWDLFA--PWKA---INLVEACRKRGVNRFILISSI-LVNGAAMG---QILNPAY-----IFLNVFGLTLIA  205 (296)
Q Consensus       140 v~~ag~~~~~~~~~--~~~~---~~~l~~~~~~~~~~iV~~SS~-~~~~~~~~---~~~~~~~-----~~~~~~~~y~~s  205 (296)
                      ||+|+.... +...  ..+.   .+++++|++.++++||++||. .+|+....   ...+++.     .+.++.+.|+.+
T Consensus        86 ih~A~~~~~-~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~s  164 (342)
T PLN02214         86 FHTASPVTD-DPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYG  164 (342)
T ss_pred             EEecCCCCC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHH
Confidence            999986432 1111  1111   899999999999999999996 57874322   1233332     133456789999


Q ss_pred             HHHHHHHHH----HhCCcEEEEecCcccCCCCCCce---e------eccc----CccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          206 KLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI---I------METE----DTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       206 K~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~---~------~~~~----~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      |.++|+++.    +++++++++||+.+||+......   .      ....    ......++|++|+|++++.+++.+..
T Consensus       165 K~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~  244 (342)
T PLN02214        165 KMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSA  244 (342)
T ss_pred             HHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCccc
Confidence            999998775    35999999999999998643210   0      0010    11224689999999999999987654


Q ss_pred             CCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          269 SYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       269 ~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                       +..|++++    ...+++|+++.+.+
T Consensus       245 -~g~yn~~~----~~~~~~el~~~i~~  266 (342)
T PLN02214        245 -SGRYLLAE----SARHRGEVVEILAK  266 (342)
T ss_pred             -CCcEEEec----CCCCHHHHHHHHHH
Confidence             34799875    45799999999875

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.97  E-value=1.4e-29  Score=222.57  Aligned_cols=207  Identities=25%  Similarity=0.324  Sum_probs=160.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |+|+|||||||||++++++|+++|++|++++|+.++.....   ..+++++.+|++| .+++.+++.+ +|+|||+++..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~---~~~v~~v~~Dl~d-~~~l~~al~g-~d~Vi~~~~~~   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK---EWGAELVYGDLSL-PETLPPSFKG-VTAIIDASTSR   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh---hcCCEEEECCCCC-HHHHHHHHCC-CCEEEECCCCC
Confidence            58999999999999999999999999999999976543222   2479999999999 8999999999 99999998743


Q ss_pred             CCCC-CcchhH---HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEE
Q 022495          147 PGWD-LFAPWK---AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTI  222 (296)
Q Consensus       147 ~~~~-~~~~~~---~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~  222 (296)
                      .... .....+   ..+++++|++.|++|||++||.+++..              +...|..+|..+|+++++.++++++
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~--------------~~~~~~~~K~~~e~~l~~~~l~~ti  141 (317)
T CHL00194         76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY--------------PYIPLMKLKSDIEQKLKKSGIPYTI  141 (317)
T ss_pred             CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc--------------CCChHHHHHHHHHHHHHHcCCCeEE
Confidence            3211 111111   189999999999999999999643210              0123678999999999999999999


Q ss_pred             EecCcccCCCCCC--------ceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhh
Q 022495          223 IRPGGLRNEPPTG--------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIK  294 (296)
Q Consensus       223 lrp~~i~g~~~~~--------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~  294 (296)
                      +||+.+|+.....        .............+++++|+|++++.++..+...+++||+++   ++.++++|+++.+.
T Consensus       142 lRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g---~~~~s~~el~~~~~  218 (317)
T CHL00194        142 FRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVG---PKSWNSSEIISLCE  218 (317)
T ss_pred             EeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecC---CCccCHHHHHHHHH
Confidence            9999888642111        001111122234689999999999999988777788999998   68899999999987


Q ss_pred             c
Q 022495          295 Q  295 (296)
Q Consensus       295 ~  295 (296)
                      +
T Consensus       219 ~  219 (317)
T CHL00194        219 Q  219 (317)
T ss_pred             H
Confidence            5

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.97  E-value=5.3e-30  Score=233.78  Aligned_cols=228  Identities=15%  Similarity=0.143  Sum_probs=162.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-------h-------------hcccCCCCCeEEEEccc
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-------K-------------TTLSKDNPSLQIVKADV  121 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~-------------~~~~~~~~~~~~~~~D~  121 (296)
                      ..+++|+||||||+||||++|+++|+++|++|++++|.....       .             ........+++++.+|+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            356789999999999999999999999999999987532110       0             00000123689999999


Q ss_pred             CCChHHHHHHhcC-CCCEEEEcCCCCCCC----CC---cc--hhHH---HHHHHHHHHcCCC-EEEEEccceeccCccCc
Q 022495          122 TEGSAKLSEAIGD-DSEAVVCATGFQPGW----DL---FA--PWKA---INLVEACRKRGVN-RFILISSILVNGAAMGQ  187 (296)
Q Consensus       122 ~d~~~~~~~~~~~-~~d~vv~~ag~~~~~----~~---~~--~~~~---~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~  187 (296)
                      +| .+.+.+++++ ++|+|||+|+.....    +.   ..  ..++   .+++++|++.+++ +||++||..+||.... 
T Consensus       123 ~d-~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~-  200 (442)
T PLN02572        123 CD-FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNI-  200 (442)
T ss_pred             CC-HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCC-
Confidence            99 8999998875 489999999753221    11   01  1122   8999999999875 9999999999986421 


Q ss_pred             cCCh-----------hh--hhhhhhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc--------------
Q 022495          188 ILNP-----------AY--IFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN--------------  236 (296)
Q Consensus       188 ~~~~-----------~~--~~~~~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~--------------  236 (296)
                      +.++           +.  .+..|.+.|+.+|.++|.+++    +++++++++||+.+||+.....              
T Consensus       201 ~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~  280 (442)
T PLN02572        201 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDG  280 (442)
T ss_pred             CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCccc
Confidence            1111           11  144567789999999998774    4599999999999999853210              


Q ss_pred             ------------------eeecccCccccCCcCHHHHHHHHHHHhcCCCCCC--CeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          237 ------------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSY--KVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       237 ------------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~--~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                                        +.+.+.......++|++|+|++++.+++.+...+  .+||+++    ..+++.|+++.+.+
T Consensus       281 ~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs----~~~si~el~~~i~~  355 (442)
T PLN02572        281 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT----EQFSVNELAKLVTK  355 (442)
T ss_pred             chhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC----CceeHHHHHHHHHH
Confidence                              0111112233479999999999999998653333  4677754    56999999999875

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.97  E-value=5e-29  Score=223.11  Aligned_cols=221  Identities=18%  Similarity=0.090  Sum_probs=164.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ++|+||||||+||||+++++.|.++|++|++++|......   .......+++.+|++| .+.+.+++.+ +|+|||+|+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~D~Vih~Aa   94 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---SEDMFCHEFHLVDLRV-MENCLKVTKG-VDHVFNLAA   94 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---ccccccceEEECCCCC-HHHHHHHHhC-CCEEEEccc
Confidence            4689999999999999999999999999999998653211   1011236788999999 8888888888 999999997


Q ss_pred             CCCCC-----CCc--chhHH---HHHHHHHHHcCCCEEEEEccceeccCccCc----cCChhh-hhhhhhHHHHHHHHHH
Q 022495          145 FQPGW-----DLF--APWKA---INLVEACRKRGVNRFILISSILVNGAAMGQ----ILNPAY-IFLNVFGLTLIAKLQA  209 (296)
Q Consensus       145 ~~~~~-----~~~--~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~----~~~~~~-~~~~~~~~y~~sK~~~  209 (296)
                      .....     ...  ...+.   .+++++|++.++++|||+||..+|+.....    ...+.. .+..|.+.|+.+|.++
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~  174 (370)
T PLN02695         95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT  174 (370)
T ss_pred             ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHH
Confidence            54211     111  11112   899999999999999999999999865321    122221 2456778899999999


Q ss_pred             HHHHH----HhCCcEEEEecCcccCCCCCC-----c----e-----------eecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          210 EQYIR----KSGINYTIIRPGGLRNEPPTG-----N----I-----------IMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       210 e~~~~----~~~~~~~~lrp~~i~g~~~~~-----~----~-----------~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      |+++.    +++++++++||+.+||+....     .    +           .+.+......+++|++|++++++.++..
T Consensus       175 E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~  254 (370)
T PLN02695        175 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKS  254 (370)
T ss_pred             HHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhc
Confidence            98764    469999999999999985321     0    0           0111122234689999999999988776


Q ss_pred             CCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          266 PESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       266 ~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +  .+.+||+++   +..+++.|+++.+.+
T Consensus       255 ~--~~~~~nv~~---~~~~s~~el~~~i~~  279 (370)
T PLN02695        255 D--FREPVNIGS---DEMVSMNEMAEIALS  279 (370)
T ss_pred             c--CCCceEecC---CCceeHHHHHHHHHH
Confidence            4  246899988   688999999999864

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.97  E-value=4.1e-29  Score=222.43  Aligned_cols=229  Identities=17%  Similarity=0.076  Sum_probs=164.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC-CCCEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv  140 (296)
                      +++|+||||||+||||+++++.|+++|++|++++|+.........  ....++.++.+|++| .+.+.+++++ ++|+||
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~vi   80 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-AAKLRKAIAEFKPEIVF   80 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-HHHHHHHHhhcCCCEEE
Confidence            357899999999999999999999999999999998754332110  112367889999999 8999998886 479999


Q ss_pred             EcCCCCCCCCC----cchhH--H---HHHHHHHHHcC-CCEEEEEccceeccCccCc-cCChhhhhhhhhHHHHHHHHHH
Q 022495          141 CATGFQPGWDL----FAPWK--A---INLVEACRKRG-VNRFILISSILVNGAAMGQ-ILNPAYIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       141 ~~ag~~~~~~~----~~~~~--~---~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~-~~~~~~~~~~~~~~y~~sK~~~  209 (296)
                      |+|+.......    .....  .   .++++++++.+ +++||++||..+|+..... +..+ ..+..|.+.|+.+|.++
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e-~~~~~p~~~Y~~sK~~~  159 (349)
T TIGR02622        81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRE-TDPLGGHDPYSSSKACA  159 (349)
T ss_pred             ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCcc-CCCCCCCCcchhHHHHH
Confidence            99985322111    11111  1   88999998876 7899999999999864221 1222 22445677899999999


Q ss_pred             HHHHHH-----------hCCcEEEEecCcccCCCCC--Cce-------------eecccCccccCCcCHHHHHHHHHHHh
Q 022495          210 EQYIRK-----------SGINYTIIRPGGLRNEPPT--GNI-------------IMETEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       210 e~~~~~-----------~~~~~~~lrp~~i~g~~~~--~~~-------------~~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      |.+++.           .+++++++||+.+||+...  +.+             ..-........++|++|++++++.++
T Consensus       160 e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~  239 (349)
T TIGR02622       160 ELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLA  239 (349)
T ss_pred             HHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHH
Confidence            988753           2899999999999997421  111             11112234457999999999998877


Q ss_pred             cCC----CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          264 LHP----ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       264 ~~~----~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ...    ...+.+||+++.+ +..+++.|+++.+.+
T Consensus       240 ~~~~~~~~~~~~~yni~s~~-~~~~s~~~~~~~i~~  274 (349)
T TIGR02622       240 EKLFTGQAEFAGAWNFGPRA-SDNARVVELVVDALE  274 (349)
T ss_pred             HHHhhcCccccceeeeCCCc-ccCcCHHHHHHHHHH
Confidence            532    1224689998621 268999999987754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.97  E-value=4.4e-29  Score=238.71  Aligned_cols=224  Identities=15%  Similarity=0.222  Sum_probs=167.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH-HHHHhcCCCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK-LSEAIGDDSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~-~~~~~~~~~d~vv~  141 (296)
                      +++|+||||||+||||++|+++|+++ |++|++++|.........  ...+++++.+|++| .+. +.+++++ +|+|||
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~--~~~~~~~~~gDl~d-~~~~l~~~l~~-~D~ViH  388 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL--GHPRFHFVEGDISI-HSEWIEYHIKK-CDVVLP  388 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc--CCCceEEEeccccC-cHHHHHHHhcC-CCEEEE
Confidence            56889999999999999999999986 799999999875443332  23478999999998 554 5677888 999999


Q ss_pred             cCCCCCCCCC----cchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh-----hh-hhhHHHHHHH
Q 022495          142 ATGFQPGWDL----FAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI-----FL-NVFGLTLIAK  206 (296)
Q Consensus       142 ~ag~~~~~~~----~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~-----~~-~~~~~y~~sK  206 (296)
                      +|+.......    ....  +.   .+++++|++.+ ++|||+||..+||...+.+.+++..     +. .+.+.|+.+|
T Consensus       389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK  467 (660)
T PRK08125        389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSK  467 (660)
T ss_pred             CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHH
Confidence            9986442211    1111  11   89999999998 7999999999998654444444332     11 3456799999


Q ss_pred             HHHHHHHH----HhCCcEEEEecCcccCCCCCC---------c--------------eeecccCccccCCcCHHHHHHHH
Q 022495          207 LQAEQYIR----KSGINYTIIRPGGLRNEPPTG---------N--------------IIMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       207 ~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~---------~--------------~~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                      .++|.+++    +++++++++||+++||+....         .              +...+.......++|++|+|+++
T Consensus       468 ~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~  547 (660)
T PRK08125        468 QLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_pred             HHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHH
Confidence            99999884    468999999999999985321         0              11112223345699999999999


Q ss_pred             HHHhcCCC--CCCCeEEEEeCCCCC-CCCHHHHHHHhhc
Q 022495          260 VEALLHPE--SSYKVVEIISRVDAP-KRSYEDLFGSIKQ  295 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~~~~~~-~~~~~el~~~i~~  295 (296)
                      +.+++.+.  ..+.+||+++   ++ .+++.|+++.+.+
T Consensus       548 ~~~l~~~~~~~~g~iyni~~---~~~~~s~~el~~~i~~  583 (660)
T PRK08125        548 FRIIENKDNRCDGQIINIGN---PDNEASIRELAEMLLA  583 (660)
T ss_pred             HHHHhccccccCCeEEEcCC---CCCceeHHHHHHHHHH
Confidence            99998653  3467899988   54 6999999999865

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=2e-28  Score=215.66  Aligned_cols=223  Identities=20%  Similarity=0.264  Sum_probs=161.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh---cc--cCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TL--SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ++|+||||||+||||++++++|+++|++|++++|+......   ..  .....+++++.+|++| .+.+.+++++ +|+|
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~d~V   80 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLE-EGSFDSVVDG-CEGV   80 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccC-cchHHHHHcC-CCEE
Confidence            36899999999999999999999999999999998654221   11  1112478999999999 7889999998 9999


Q ss_pred             EEcCCCCCCC--CCc-chh--HH---HHHHHHHHHc-CCCEEEEEcccee--ccCcc---CccCChhhhhhhh------h
Q 022495          140 VCATGFQPGW--DLF-APW--KA---INLVEACRKR-GVNRFILISSILV--NGAAM---GQILNPAYIFLNV------F  199 (296)
Q Consensus       140 v~~ag~~~~~--~~~-~~~--~~---~~~l~~~~~~-~~~~iV~~SS~~~--~~~~~---~~~~~~~~~~~~~------~  199 (296)
                      ||+|+.....  +.. ...  ++   .++++++++. ++++|||+||.++  |+...   +.+.+++. +..+      .
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~-~~~p~~~~~~~  159 (322)
T PLN02662         81 FHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETW-FSDPAFCEESK  159 (322)
T ss_pred             EEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCccc-CCChhHhhccc
Confidence            9999854321  111 111  12   8999999887 7899999999863  65321   11223322 1222      2


Q ss_pred             HHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc--ee-------ecc---cCccccCCcCHHHHHHHHHHHh
Q 022495          200 GLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN--II-------MET---EDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~--~~-------~~~---~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      +.|+.+|.++|++++    +.+++++++||+.+||+.....  ..       ...   .......++|++|+|++++.++
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~  239 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAF  239 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHh
Confidence            579999999998764    4699999999999999863321  00       001   1122346899999999999999


Q ss_pred             cCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          264 LHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       264 ~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ..+...+ .|++.+    ..++++|+++.+.+
T Consensus       240 ~~~~~~~-~~~~~g----~~~s~~e~~~~i~~  266 (322)
T PLN02662        240 EIPSASG-RYCLVE----RVVHYSEVVKILHE  266 (322)
T ss_pred             cCcCcCC-cEEEeC----CCCCHHHHHHHHHH
Confidence            8765444 677754    67999999999875

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=2.2e-28  Score=215.51  Aligned_cols=224  Identities=25%  Similarity=0.319  Sum_probs=162.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh---ccc--CCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      .+|+||||||+||||++++++|+++|++|+++.|+......   ...  ....+++++.+|++| .+.+.+++++ +|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~d~v   81 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE-ESSFEQAIEG-CDAV   81 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCC-cchHHHHHhC-CCEE
Confidence            47899999999999999999999999999999998764321   111  112468999999999 8899999999 9999


Q ss_pred             EEcCCCCCCC--CCc---chhHH---HHHHHHHHHc-CCCEEEEEccceec--cCcc---CccCChhhhh-----hhhhH
Q 022495          140 VCATGFQPGW--DLF---APWKA---INLVEACRKR-GVNRFILISSILVN--GAAM---GQILNPAYIF-----LNVFG  200 (296)
Q Consensus       140 v~~ag~~~~~--~~~---~~~~~---~~~l~~~~~~-~~~~iV~~SS~~~~--~~~~---~~~~~~~~~~-----~~~~~  200 (296)
                      ||+|+.....  +..   ...+.   .+++++|++. ++++||++||.++|  +...   +...++....     ..+.+
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         82 FHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             EEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            9999854211  111   11112   8999999886 68999999998764  3221   1222332211     12346


Q ss_pred             HHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc--e----e---eccc---CccccCCcCHHHHHHHHHHHhc
Q 022495          201 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN--I----I---METE---DTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       201 ~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~--~----~---~~~~---~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      .|+.+|.++|.+++    +++++++++||+.+||+.....  .    .   ....   ......+++++|+|++++.++.
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~  241 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALE  241 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhc
Confidence            79999999997664    4699999999999999853221  0    0   0111   1122468999999999999999


Q ss_pred             CCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          265 HPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       265 ~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .+...+ .|++.+    ..+++.|+++.+.+
T Consensus       242 ~~~~~~-~yni~~----~~~s~~e~~~~i~~  267 (322)
T PLN02986        242 TPSANG-RYIIDG----PIMSVNDIIDILRE  267 (322)
T ss_pred             CcccCC-cEEEec----CCCCHHHHHHHHHH
Confidence            876544 799843    57999999999875

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=1.8e-28  Score=217.87  Aligned_cols=222  Identities=16%  Similarity=0.091  Sum_probs=165.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-----hhhcccC----CCCCeEEEEcccCCChHHHHHHhcC-CC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-----AKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD-DS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~-~~  136 (296)
                      |+||||||+||||++++++|+++|++|++++|.+..     .......    ...+++++.+|++| .+.+.+++++ ++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~~~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTD-SSNLRRIIDEIKP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCC-HHHHHHHHHhCCC
Confidence            589999999999999999999999999999998642     1111100    12468999999999 8999999986 37


Q ss_pred             CEEEEcCCCCCCCCC----cchh--HH---HHHHHHHHHcCCC---EEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          137 EAVVCATGFQPGWDL----FAPW--KA---INLVEACRKRGVN---RFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~--~~---~~~l~~~~~~~~~---~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      |+|||+|+.......    ....  +.   .+++++|++.+++   +|||+||..+||.....+..++ .+..|.+.|+.
T Consensus        80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-~~~~p~~~Y~~  158 (343)
T TIGR01472        80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-TPFYPRSPYAA  158 (343)
T ss_pred             CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-CCCCCCChhHH
Confidence            999999986432211    1111  11   8999999998753   8999999999996544333333 34567788999


Q ss_pred             HHHHHHHHHH----HhCCcEEEEecCcccCCCCCCce-------------------eecccCccccCCcCHHHHHHHHHH
Q 022495          205 AKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       205 sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~-------------------~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      +|.++|.+++    +++++++..|+.+++|+......                   ...+.......++|++|+|++++.
T Consensus       159 sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~  238 (343)
T TIGR01472       159 AKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWL  238 (343)
T ss_pred             HHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHH
Confidence            9999998875    35888998999888887422111                   011112334578999999999999


Q ss_pred             HhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          262 ALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       262 ~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++..+.  ...||+++   +..+++.|+++.+.+
T Consensus       239 ~~~~~~--~~~yni~~---g~~~s~~e~~~~i~~  267 (343)
T TIGR01472       239 MLQQDK--PDDYVIAT---GETHSVREFVEVSFE  267 (343)
T ss_pred             HHhcCC--CccEEecC---CCceeHHHHHHHHHH
Confidence            988653  35899998   689999999998865

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=5.1e-28  Score=213.39  Aligned_cols=222  Identities=25%  Similarity=0.310  Sum_probs=161.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh---ccc--CCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      +|+||||||+||||+++++.|+++|++|++++|+......   ...  ....+++++.+|++| .+.+.+++++ +|+||
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~-~d~vi   82 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD-EGSFELAIDG-CETVF   82 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCC-chHHHHHHcC-CCEEE
Confidence            6899999999999999999999999999999888754322   111  112468999999999 8899999998 99999


Q ss_pred             EcCCCCCCCCCcch----h--HH---HHHHHHHHHc-CCCEEEEEccceeccCcc-----CccCChhhhhhhh------h
Q 022495          141 CATGFQPGWDLFAP----W--KA---INLVEACRKR-GVNRFILISSILVNGAAM-----GQILNPAYIFLNV------F  199 (296)
Q Consensus       141 ~~ag~~~~~~~~~~----~--~~---~~~l~~~~~~-~~~~iV~~SS~~~~~~~~-----~~~~~~~~~~~~~------~  199 (296)
                      ||||..........    .  +.   .++++++.+. ++++||++||..+|+...     ..+.+|+. +.+|      .
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~-~~~p~~~~~~~  161 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETF-FTNPSFAEERK  161 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCC-CCchhHhcccc
Confidence            99986432111111    1  11   8899998875 578999999998765432     11223332 2222      3


Q ss_pred             HHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc--ee-------ecccC---ccccCCcCHHHHHHHHHHHh
Q 022495          200 GLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN--II-------METED---TLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~--~~-------~~~~~---~~~~~~i~~~Dva~~i~~~l  263 (296)
                      +.|+.+|.++|.+++    +++++++++||+.+||+.....  ..       .....   .....++|++|+|++++.++
T Consensus       162 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        162 QWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             cchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHh
Confidence            579999999998775    4699999999999999864321  10       01111   11136899999999999999


Q ss_pred             cCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          264 LHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       264 ~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.+.. +..||+.+    ..++++|+++.+.+
T Consensus       242 ~~~~~-~~~~ni~~----~~~s~~ei~~~i~~  268 (325)
T PLN02989        242 ETPSA-NGRYIIDG----PVVTIKDIENVLRE  268 (325)
T ss_pred             cCccc-CceEEEec----CCCCHHHHHHHHHH
Confidence            87654 34789843    57999999999875

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.96  E-value=5.5e-28  Score=214.31  Aligned_cols=224  Identities=21%  Similarity=0.194  Sum_probs=160.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh-----cccCCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +++|+||||||+||||++++++|+++|++|+++.|+......     .+. ...+++++.+|++| .+.+.+++++ +|+
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~   83 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQ-ELGDLKIFGADLTD-EESFEAPIAG-CDL   83 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcC-CCCceEEEEcCCCC-hHHHHHHHhc-CCE
Confidence            357899999999999999999999999999999988654321     111 11368899999999 8889999998 999


Q ss_pred             EEEcCCCCCCCC--Ccc---hhHH---HHHHHHHHHc-CCCEEEEEccceeccCcc----CccCChhh--------hhhh
Q 022495          139 VVCATGFQPGWD--LFA---PWKA---INLVEACRKR-GVNRFILISSILVNGAAM----GQILNPAY--------IFLN  197 (296)
Q Consensus       139 vv~~ag~~~~~~--~~~---~~~~---~~~l~~~~~~-~~~~iV~~SS~~~~~~~~----~~~~~~~~--------~~~~  197 (296)
                      |||+|+......  ...   ..+.   .++++++.+. ++++||++||..+|+...    +.+.++..        .+..
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~  163 (338)
T PLN00198         84 VFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKP  163 (338)
T ss_pred             EEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCC
Confidence            999998543221  111   1122   8899999886 588999999999997432    11222211        1223


Q ss_pred             hhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCce---e-------------ecc--cCcc---ccCCcCH
Q 022495          198 VFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI---I-------------MET--EDTL---YEGTISR  252 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~---~-------------~~~--~~~~---~~~~i~~  252 (296)
                      |.+.|+.+|.++|.+++    +++++++++||+.+||+......   .             ..+  ..+.   ...++|+
T Consensus       164 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V  243 (338)
T PLN00198        164 PTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHV  243 (338)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEH
Confidence            56779999999998765    46899999999999998632210   0             000  0011   1368999


Q ss_pred             HHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          253 DQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +|+|++++.++..+... ..| +++   +...++.|+++.+.+
T Consensus       244 ~D~a~a~~~~~~~~~~~-~~~-~~~---~~~~s~~el~~~i~~  281 (338)
T PLN00198        244 EDVCRAHIFLAEKESAS-GRY-ICC---AANTSVPELAKFLIK  281 (338)
T ss_pred             HHHHHHHHHHhhCcCcC-CcE-EEe---cCCCCHHHHHHHHHH
Confidence            99999999999876433 356 444   467899999999864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.96  E-value=3.1e-28  Score=217.35  Aligned_cols=224  Identities=14%  Similarity=0.085  Sum_probs=160.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcch--hhhccc-CCCCCeEEEEcccCCChHHHHHHhcC-CCCEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDK--AKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~--~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv  140 (296)
                      +|+||||||+||||+++++.|+++|++|+++ +|....  ...... ....++.++.+|++| .+.+.+++++ ++|+||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~D~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD-RAELARVFTEHQPDCVM   79 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcC-hHHHHHHHhhcCCCEEE
Confidence            3689999999999999999999999876554 443221  111111 012467889999999 8999998874 499999


Q ss_pred             EcCCCCCCCC----Ccchh--HH---HHHHHHHHH---------cCCCEEEEEccceeccCccC--ccCChhhhhhhhhH
Q 022495          141 CATGFQPGWD----LFAPW--KA---INLVEACRK---------RGVNRFILISSILVNGAAMG--QILNPAYIFLNVFG  200 (296)
Q Consensus       141 ~~ag~~~~~~----~~~~~--~~---~~~l~~~~~---------~~~~~iV~~SS~~~~~~~~~--~~~~~~~~~~~~~~  200 (296)
                      ||||......    .....  +.   .++++++++         .++++||++||..+|+...+  .+.++ ..+..+.+
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E-~~~~~p~s  158 (355)
T PRK10217         80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE-TTPYAPSS  158 (355)
T ss_pred             ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC-CCCCCCCC
Confidence            9998643211    11111  11   889999876         24679999999999985422  22233 23445677


Q ss_pred             HHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHHHHHHHHH
Q 022495          201 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       201 ~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      .|+.+|.++|.+++    +.+++++++||+.+||+.....               +...+.......++|++|++++++.
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~  238 (355)
T PRK10217        159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYC  238 (355)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHH
Confidence            89999999998774    4689999999999999864211               1111222334579999999999999


Q ss_pred             HhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          262 ALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       262 ~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++..+. .+.+||+++   +..+++.|+++.+.+
T Consensus       239 ~~~~~~-~~~~yni~~---~~~~s~~~~~~~i~~  268 (355)
T PRK10217        239 VATTGK-VGETYNIGG---HNERKNLDVVETICE  268 (355)
T ss_pred             HHhcCC-CCCeEEeCC---CCcccHHHHHHHHHH
Confidence            988754 467899998   688999999998864

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=5e-28  Score=215.68  Aligned_cols=224  Identities=20%  Similarity=0.234  Sum_probs=160.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc---cc--CCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ..|+||||||+||||++++++|+++|++|++++|+.......   ..  ....++.++.+|++| .+.+.+++++ +|+|
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~~~~~~-~d~V   81 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAV-EGSFDDAIRG-CTGV   81 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCC-hhhHHHHHhC-CCEE
Confidence            367999999999999999999999999999999986554321   11  112358899999999 8899999998 9999


Q ss_pred             EEcCCCCCCC--CCc-chh--HH---HHHHHHHHHcC-CCEEEEEccceeccCccC-cc-CChhh--------hhhhhhH
Q 022495          140 VCATGFQPGW--DLF-APW--KA---INLVEACRKRG-VNRFILISSILVNGAAMG-QI-LNPAY--------IFLNVFG  200 (296)
Q Consensus       140 v~~ag~~~~~--~~~-~~~--~~---~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~-~~-~~~~~--------~~~~~~~  200 (296)
                      ||+|+.....  +.. ...  +.   .++++++++.+ +++|||+||.++|+...+ .+ .++..        .+..+.+
T Consensus        82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (351)
T PLN02650         82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW  161 (351)
T ss_pred             EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence            9999854321  111 111  12   89999999877 789999999977654321 11 12221        1112345


Q ss_pred             HHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCcee---------ecccC-----ccccCCcCHHHHHHHHHHH
Q 022495          201 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNII---------METED-----TLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       201 ~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~~---------~~~~~-----~~~~~~i~~~Dva~~i~~~  262 (296)
                      .|+.+|.++|.+++    +++++++++||+.+||+.......         .....     .....++|++|+|++++.+
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~  241 (351)
T PLN02650        162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFL  241 (351)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHH
Confidence            79999999998764    469999999999999986432110         00000     0113689999999999999


Q ss_pred             hcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          263 LLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       263 l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++.+...+ .| +++   +..+++.|+++.|.+
T Consensus       242 l~~~~~~~-~~-i~~---~~~~s~~el~~~i~~  269 (351)
T PLN02650        242 FEHPAAEG-RY-ICS---SHDATIHDLAKMLRE  269 (351)
T ss_pred             hcCcCcCc-eE-Eec---CCCcCHHHHHHHHHH
Confidence            98765444 67 444   477999999999875

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=3.3e-28  Score=221.16  Aligned_cols=218  Identities=17%  Similarity=0.182  Sum_probs=159.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +.|+||||||+||||++|++.|+++|++|++++|..........  ....+++++.+|+.+ ..     +.+ +|+|||+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~-~~-----~~~-~D~ViHl  191 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVE-PI-----LLE-VDQIYHL  191 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccc-cc-----ccC-CCEEEEC
Confidence            46899999999999999999999999999999986432111110  012468889999987 32     456 9999999


Q ss_pred             CCCCCCC----CCcch--hHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh----hhhhhhHHHHHHHHHH
Q 022495          143 TGFQPGW----DLFAP--WKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAKLQA  209 (296)
Q Consensus       143 ag~~~~~----~~~~~--~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~----~~~~~~~~y~~sK~~~  209 (296)
                      |+.....    +....  .++   .+++++|++.++ +|||+||..+||...+.+.+++.    .+..+.+.|+.+|.++
T Consensus       192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~a  270 (436)
T PLN02166        192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  270 (436)
T ss_pred             ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHH
Confidence            9853321    11111  111   999999999886 89999999999976544444432    2445567899999999


Q ss_pred             HHHHH----HhCCcEEEEecCcccCCCCC---Cce--------------eecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          210 EQYIR----KSGINYTIIRPGGLRNEPPT---GNI--------------IMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       210 e~~~~----~~~~~~~~lrp~~i~g~~~~---~~~--------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      |++++    +.+++++++||+.+||+...   +.+              ...+.......++|++|+++++..+++.+. 
T Consensus       271 E~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~-  349 (436)
T PLN02166        271 ETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH-  349 (436)
T ss_pred             HHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC-
Confidence            98875    35899999999999998532   111              111222334569999999999999887543 


Q ss_pred             CCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          269 SYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       269 ~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                       ..+||+++   ++.+++.|+++.|.+
T Consensus       350 -~giyNIgs---~~~~Si~ela~~I~~  372 (436)
T PLN02166        350 -VGPFNLGN---PGEFTMLELAEVVKE  372 (436)
T ss_pred             -CceEEeCC---CCcEeHHHHHHHHHH
Confidence             35899988   688999999999875

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.96  E-value=6.3e-28  Score=210.23  Aligned_cols=207  Identities=15%  Similarity=0.113  Sum_probs=151.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |+||||||+||||+++++.|+++| +|++++|...              .+.+|++| .+.+.+++++ ++|+|||||+.
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------~~~~Dl~d-~~~~~~~~~~~~~D~Vih~Aa~   64 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------DYCGDFSN-PEGVAETVRKIRPDVIVNAAAH   64 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------cccCCCCC-HHHHHHHHHhcCCCEEEECCcc
Confidence            579999999999999999999999 7988887531              24589999 8999998874 48999999986


Q ss_pred             CCCCCC----cch--hHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          146 QPGWDL----FAP--WKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       146 ~~~~~~----~~~--~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      ......    ...  .+.   .+++++|++.++ ++||+||..+|+.....+..|+. +.+|.+.|+.+|.++|++++.+
T Consensus        65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~-~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETD-ATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCC-CCCCCCHHHHHHHHHHHHHHHh
Confidence            543211    111  111   899999999986 89999999999876554555543 4667788999999999999888


Q ss_pred             CCcEEEEecCcccCCCCCCce---e---eccc-Ccc----ccC----CcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCC
Q 022495          217 GINYTIIRPGGLRNEPPTGNI---I---METE-DTL----YEG----TISRDQVAEVAVEALLHPESSYKVVEIISRVDA  281 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~~~---~---~~~~-~~~----~~~----~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~  281 (296)
                      ..+++++||+++||+...+.+   .   .... ...    +..    +...+|+++++..++..+.. +.+||+++   +
T Consensus       143 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giyni~~---~  218 (299)
T PRK09987        143 CAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVA---S  218 (299)
T ss_pred             CCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeEEeeC---C
Confidence            889999999999997533211   0   0000 000    011    12345566666666654433 35999998   6


Q ss_pred             CCCCHHHHHHHhhc
Q 022495          282 PKRSYEDLFGSIKQ  295 (296)
Q Consensus       282 ~~~~~~el~~~i~~  295 (296)
                      ...++.|+++.|.+
T Consensus       219 ~~~s~~e~~~~i~~  232 (299)
T PRK09987        219 GTTTWHDYAALVFE  232 (299)
T ss_pred             CCccHHHHHHHHHH
Confidence            88999999998743

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.96  E-value=6.1e-28  Score=219.77  Aligned_cols=219  Identities=16%  Similarity=0.169  Sum_probs=159.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc--cCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL--SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++|+||||||+||||++|++.|+++|++|++++|......+..  .....+++++.+|+.+ ..     +.+ +|+|||
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~-~~-----l~~-~D~ViH  189 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVE-PI-----LLE-VDQIYH  189 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccC-hh-----hcC-CCEEEE
Confidence            35789999999999999999999999999999987543221111  0123568889999987 32     356 999999


Q ss_pred             cCCCCCCC----CCcch--hHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh----hhhhhhHHHHHHHHH
Q 022495          142 ATGFQPGW----DLFAP--WKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAKLQ  208 (296)
Q Consensus       142 ~ag~~~~~----~~~~~--~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~----~~~~~~~~y~~sK~~  208 (296)
                      +|+.....    +....  .++   .+++++|++.++ +|||+||..+|+.....+.+++.    .+..+.+.|+.+|.+
T Consensus       190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~  268 (442)
T PLN02206        190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRT  268 (442)
T ss_pred             eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHH
Confidence            99854321    11111  111   899999999986 99999999999865444444432    234456789999999


Q ss_pred             HHHHHH----HhCCcEEEEecCcccCCCC---CCce--------------eecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          209 AEQYIR----KSGINYTIIRPGGLRNEPP---TGNI--------------IMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       209 ~e~~~~----~~~~~~~~lrp~~i~g~~~---~~~~--------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +|+++.    +++++++++||+.+||+..   .+.+              ...........++|++|+|++++.+++...
T Consensus       269 aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~  348 (442)
T PLN02206        269 AETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH  348 (442)
T ss_pred             HHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC
Confidence            998775    4689999999999999752   1111              111122233468999999999999887542


Q ss_pred             CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          268 SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       268 ~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                        ..+||+++   +..+++.|+++.+.+
T Consensus       349 --~g~yNIgs---~~~~sl~Elae~i~~  371 (442)
T PLN02206        349 --VGPFNLGN---PGEFTMLELAKVVQE  371 (442)
T ss_pred             --CceEEEcC---CCceeHHHHHHHHHH
Confidence              34899998   688999999999875

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=1.3e-27  Score=213.04  Aligned_cols=228  Identities=21%  Similarity=0.239  Sum_probs=165.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-------hhcccCCCCCeEEEEcccCCChHHHHHHhcC-
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-------KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      ++++|+|+||||+||||++++++|+++|++|++++|.....       .........++.++.+|++| .+.+.+++++ 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~l~~~~~~~   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRD-KEALEKVFAST   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCC-HHHHHHHHHhC
Confidence            45678999999999999999999999999999998753221       11111112468899999999 8889888863 


Q ss_pred             CCCEEEEcCCCCCCCCCc-ch---h--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHH
Q 022495          135 DSEAVVCATGFQPGWDLF-AP---W--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA  205 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~-~~---~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s  205 (296)
                      .+|+|||+|+........ ..   .  +.   .+++++|++.++++||++||..+|+...+.+.+++ .+.++...|+.+
T Consensus        81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-~~~~~~~~Y~~s  159 (352)
T PLN02240         81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-FPLSATNPYGRT  159 (352)
T ss_pred             CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-CCCCCCCHHHHH
Confidence            499999999864321111 11   1  11   78999999989899999999999986544444443 355667889999


Q ss_pred             HHHHHHHHHH-----hCCcEEEEecCcccCCCCC--------C---ce---------------eec------ccCccccC
Q 022495          206 KLQAEQYIRK-----SGINYTIIRPGGLRNEPPT--------G---NI---------------IME------TEDTLYEG  248 (296)
Q Consensus       206 K~~~e~~~~~-----~~~~~~~lrp~~i~g~~~~--------~---~~---------------~~~------~~~~~~~~  248 (296)
                      |.++|++++.     .+++++++|++.+||+...        +   .+               ...      +.......
T Consensus       160 K~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  239 (352)
T PLN02240        160 KLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRD  239 (352)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEe
Confidence            9999998753     4688999999988885321        0   00               000      01122345


Q ss_pred             CcCHHHHHHHHHHHhcC----CCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          249 TISRDQVAEVAVEALLH----PESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       249 ~i~~~Dva~~i~~~l~~----~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +++++|+|++++.++..    +...+++||+++   ++.++++|+++.+.+
T Consensus       240 ~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~---~~~~s~~el~~~i~~  287 (352)
T PLN02240        240 YIHVMDLADGHIAALRKLFTDPDIGCEAYNLGT---GKGTSVLEMVAAFEK  287 (352)
T ss_pred             eEEHHHHHHHHHHHHhhhhhccCCCCceEEccC---CCcEeHHHHHHHHHH
Confidence            89999999998888864    233457899988   689999999999864

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=8.5e-28  Score=213.28  Aligned_cols=225  Identities=15%  Similarity=0.101  Sum_probs=166.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-----hhhccc---CCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-----AKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      ++++|+||||||+||||++++++|+++|++|++++|....     ......   ....++.++.+|++| .+.+.+++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~   81 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSD-ASSLRRWLDD   81 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCC-HHHHHHHHHH
Confidence            4568999999999999999999999999999999987542     111110   012458899999999 8889888875


Q ss_pred             -CCCEEEEcCCCCCCCC----Ccch--hHH---HHHHHHHHHcCCC-----EEEEEccceeccCccCccCChhhhhhhhh
Q 022495          135 -DSEAVVCATGFQPGWD----LFAP--WKA---INLVEACRKRGVN-----RFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~----~~~~--~~~---~~~l~~~~~~~~~-----~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                       .+|+|||||+......    ....  .+.   .++++++++.+++     +||++||.++||.... +.+++ .+..|.
T Consensus        82 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~-~~~~p~  159 (340)
T PLN02653         82 IKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSET-TPFHPR  159 (340)
T ss_pred             cCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCC-CCCCCC
Confidence             3799999999643221    1111  111   8899999988864     8999999999997544 33333 355677


Q ss_pred             HHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCce-------------------eecccCccccCCcCHHHHH
Q 022495          200 GLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVA  256 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~-------------------~~~~~~~~~~~~i~~~Dva  256 (296)
                      +.|+.+|.++|.+++    ++++++...|+.+++|+......                   ...+.......++|++|+|
T Consensus       160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a  239 (340)
T PLN02653        160 SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYV  239 (340)
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHH
Confidence            889999999999874    45788888888888876432211                   1112223335789999999


Q ss_pred             HHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          257 EVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       257 ~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++++.++....  +..||+++   ++.+++.|+++.+.+
T Consensus       240 ~a~~~~~~~~~--~~~yni~~---g~~~s~~e~~~~i~~  273 (340)
T PLN02653        240 EAMWLMLQQEK--PDDYVVAT---EESHTVEEFLEEAFG  273 (340)
T ss_pred             HHHHHHHhcCC--CCcEEecC---CCceeHHHHHHHHHH
Confidence            99999998653  45799998   688999999998864

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=8.3e-28  Score=198.56  Aligned_cols=222  Identities=18%  Similarity=0.113  Sum_probs=170.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcC-----cchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRD-----LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~  138 (296)
                      |++|||||.||||+++++.++++..  +|++++.-     .+.+..+.  ..++..++++|++| .+.+.++|++ ++|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~--~~~~~~fv~~DI~D-~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE--DSPRYRFVQGDICD-RELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh--cCCCceEEeccccC-HHHHHHHHHhcCCCe
Confidence            5799999999999999999999863  46666542     22332222  45799999999999 8999999985 5999


Q ss_pred             EEEcCCCCCCCCC------cchhHH---HHHHHHHHHcCCC-EEEEEccceeccCccCc-cCChhhhhhhhhHHHHHHHH
Q 022495          139 VVCATGFQPGWDL------FAPWKA---INLVEACRKRGVN-RFILISSILVNGAAMGQ-ILNPAYIFLNVFGLTLIAKL  207 (296)
Q Consensus       139 vv~~ag~~~~~~~------~~~~~~---~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~-~~~~~~~~~~~~~~y~~sK~  207 (296)
                      |+|.|+-.+-...      +...++   .++|+++++...+ ||+++||-.|||+-... ..-.+..|.+|.++|.+||+
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKA  157 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKA  157 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhh
Confidence            9999985442211      112222   9999999999754 99999999999986543 22234567889999999999


Q ss_pred             HHHHHHH----HhCCcEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          208 QAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       208 ~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      +...+++    .+|+++++.|+++-|||.....               +.+.+.+.....|++++|-++++..++.... 
T Consensus       158 asD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~-  236 (340)
T COG1088         158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK-  236 (340)
T ss_pred             hHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc-
Confidence            9998776    4799999999999999864432               1122333444579999999999888888765 


Q ss_pred             CCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          269 SYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       269 ~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .|.+|||++   ++..+..|+++.|++
T Consensus       237 ~GE~YNIgg---~~E~~Nlevv~~i~~  260 (340)
T COG1088         237 IGETYNIGG---GNERTNLEVVKTICE  260 (340)
T ss_pred             CCceEEeCC---CccchHHHHHHHHHH
Confidence            488999999   677888898888764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.96  E-value=1.1e-27  Score=207.64  Aligned_cols=204  Identities=22%  Similarity=0.250  Sum_probs=159.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQ  146 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~~  146 (296)
                      +||||||+||||++++++|+++|++|++++|.                  .+|+.| .+.+.+++++ ++|+|||+|+..
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------~~d~~~-~~~~~~~~~~~~~d~vi~~a~~~   61 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------QLDLTD-PEALERLLRAIRPDAVVNTAAYT   61 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------ccCCCC-HHHHHHHHHhCCCCEEEECCccc
Confidence            58999999999999999999999999998884                  479999 8999999987 469999999864


Q ss_pred             CCCCCc----chhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhC
Q 022495          147 PGWDLF----APWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSG  217 (296)
Q Consensus       147 ~~~~~~----~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~  217 (296)
                      ......    ....     ..++++++++.+. +||++||.++|+...+.+.+++. +.++.+.|+.+|.++|++++..+
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~-~~~~~~~Y~~~K~~~E~~~~~~~  139 (287)
T TIGR01214        62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDD-ATNPLNVYGQSKLAGEQAIRAAG  139 (287)
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCC-CCCCcchhhHHHHHHHHHHHHhC
Confidence            321111    1111     1889999998885 89999999999865444444443 34567789999999999999889


Q ss_pred             CcEEEEecCcccCCCCCCcee------------ecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCC
Q 022495          218 INYTIIRPGGLRNEPPTGNII------------METEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       218 ~~~~~lrp~~i~g~~~~~~~~------------~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~  285 (296)
                      ++++++||+++||+.....+.            .......+..+++++|+|+++..++..+...+++||+++   +..++
T Consensus       140 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~---~~~~s  216 (287)
T TIGR01214       140 PNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLAN---SGQCS  216 (287)
T ss_pred             CCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEEC---CCCcC
Confidence            999999999999986422210            000111235689999999999999987655567999998   68899


Q ss_pred             HHHHHHHhhc
Q 022495          286 YEDLFGSIKQ  295 (296)
Q Consensus       286 ~~el~~~i~~  295 (296)
                      +.|+++.+.+
T Consensus       217 ~~e~~~~i~~  226 (287)
T TIGR01214       217 WYEFAQAIFE  226 (287)
T ss_pred             HHHHHHHHHH
Confidence            9999999875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=2.9e-27  Score=212.70  Aligned_cols=214  Identities=24%  Similarity=0.280  Sum_probs=161.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh-----cccCCCCCeEEEEcccCCChHHHHHHhcC---C
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLSKDNPSLQIVKADVTEGSAKLSEAIGD---D  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~  135 (296)
                      .++++|+||||+|+||++++++|+++|++|++++|+..+...     .......+++++.+|++| .+.+.+++++   +
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~~~~  136 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHhCCC
Confidence            457899999999999999999999999999999998754321     011123578999999999 8999988873   2


Q ss_pred             CCEEEEcCCCCCCCCC-cc---hhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHH
Q 022495          136 SEAVVCATGFQPGWDL-FA---PWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQ  211 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~-~~---~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~  211 (296)
                      +|+||||++....... ..   .....++++++++.++++||++||..+|+.               ...|..+|...|+
T Consensus       137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p---------------~~~~~~sK~~~E~  201 (390)
T PLN02657        137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP---------------LLEFQRAKLKFEA  201 (390)
T ss_pred             CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc---------------chHHHHHHHHHHH
Confidence            9999999985332111 11   111289999999999999999999876531               2347789999999


Q ss_pred             HHHH--hCCcEEEEecCcccCCCCC-------C-ceeecccCcc-ccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCC
Q 022495          212 YIRK--SGINYTIIRPGGLRNEPPT-------G-NIIMETEDTL-YEGTISRDQVAEVAVEALLHPESSYKVVEIISRVD  280 (296)
Q Consensus       212 ~~~~--~~~~~~~lrp~~i~g~~~~-------~-~~~~~~~~~~-~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~  280 (296)
                      .++.  .++++++|||+.+|+....       + .+.+.+.... +..+++++|+|++++.++.++...+++|+++++  
T Consensus       202 ~l~~~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp--  279 (390)
T PLN02657        202 ELQALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGP--  279 (390)
T ss_pred             HHHhccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCC--
Confidence            8875  8999999999999975311       1 1111122222 235799999999999999877667789999872  


Q ss_pred             CCCCCHHHHHHHhhc
Q 022495          281 APKRSYEDLFGSIKQ  295 (296)
Q Consensus       281 ~~~~~~~el~~~i~~  295 (296)
                      ++.+|+.|+++.+.+
T Consensus       280 ~~~~S~~Eia~~l~~  294 (390)
T PLN02657        280 GKALTPLEQGEMLFR  294 (390)
T ss_pred             CcccCHHHHHHHHHH
Confidence            258999999999865

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.96  E-value=1.2e-27  Score=212.16  Aligned_cols=225  Identities=18%  Similarity=0.197  Sum_probs=162.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc----ccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT----LSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      |+|+||||+||||+++++.|+++|++|++++|........    ......++.++.+|++| .+.+.+++.. ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN-EALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCC-HHHHHHHHhcCCCCEEEE
Confidence            5799999999999999999999999999987653221111    11012457889999999 8888888863 4999999


Q ss_pred             cCCCCCCCCC----cchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH
Q 022495          142 ATGFQPGWDL----FAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY  212 (296)
Q Consensus       142 ~ag~~~~~~~----~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  212 (296)
                      +|+.......    .....  .   .+++++|++.++++||++||..+|+.....+.++......+.+.|+.+|.++|++
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~  159 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQI  159 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHH
Confidence            9986542211    11111  1   8999999999999999999999998654444444433235678899999999998


Q ss_pred             HHH-----hCCcEEEEecCcccCCCCCC-----------cee------ec-c--------------cCccccCCcCHHHH
Q 022495          213 IRK-----SGINYTIIRPGGLRNEPPTG-----------NII------ME-T--------------EDTLYEGTISRDQV  255 (296)
Q Consensus       213 ~~~-----~~~~~~~lrp~~i~g~~~~~-----------~~~------~~-~--------------~~~~~~~~i~~~Dv  255 (296)
                      +++     .+++++++|++.+||+...+           .+.      .. .              .......+++++|+
T Consensus       160 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (338)
T PRK10675        160 LTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_pred             HHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence            863     37899999998888753110           000      00 0              11223468999999


Q ss_pred             HHHHHHHhcCC--CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          256 AEVAVEALLHP--ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       256 a~~i~~~l~~~--~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |++++.++...  ...+++||+++   ++.+++.|+++.+.+
T Consensus       240 a~~~~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~  278 (338)
T PRK10675        240 ADGHVAAMEKLANKPGVHIYNLGA---GVGSSVLDVVNAFSK  278 (338)
T ss_pred             HHHHHHHHHhhhccCCCceEEecC---CCceeHHHHHHHHHH
Confidence            99999988752  23457899988   688999999999865

>PLN02686 cinnamoyl-CoA reductase

Probab=99.96  E-value=1.4e-27  Score=213.64  Aligned_cols=228  Identities=21%  Similarity=0.224  Sum_probs=163.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--------CCCCeEEEEcccCCChHHHHHHhc
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--------DNPSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      .+.++|+||||||+||||+++++.|+++|++|+++.|+.+....+...        ...++.++.+|++| .+.+.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTE-PESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCC-HHHHHHHHH
Confidence            345789999999999999999999999999999988886543322110        01358899999999 899999999


Q ss_pred             CCCCEEEEcCCCCCCCC------CcchhHH---HHHHHHHHHc-CCCEEEEEccce--eccCc--cC--ccCChh-----
Q 022495          134 DDSEAVVCATGFQPGWD------LFAPWKA---INLVEACRKR-GVNRFILISSIL--VNGAA--MG--QILNPA-----  192 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~------~~~~~~~---~~~l~~~~~~-~~~~iV~~SS~~--~~~~~--~~--~~~~~~-----  192 (296)
                      + +|+|||+|+......      .....+.   .++++++++. ++++|||+||..  +|+..  ..  ...++.     
T Consensus       128 ~-~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~  206 (367)
T PLN02686        128 G-CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE  206 (367)
T ss_pred             h-ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence            8 999999998643221      1111112   8999999986 799999999974  67632  11  112222     


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCce---e----e---cccCccccCCcCHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI---I----M---ETEDTLYEGTISRDQVAEV  258 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~---~----~---~~~~~~~~~~i~~~Dva~~  258 (296)
                      ..+.++.+.|+.+|.++|.+++    +.++++++|||+++||+......   .    .   .........+++++|+|++
T Consensus       207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A  286 (367)
T PLN02686        207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAEA  286 (367)
T ss_pred             hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHHH
Confidence            1233456679999999999874    46999999999999998532110   0    0   0001111248999999999


Q ss_pred             HHHHhcCC--CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          259 AVEALLHP--ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       259 i~~~l~~~--~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++.+++.+  ...+..| +++   +..+++.|+++.|.+
T Consensus       287 ~~~al~~~~~~~~~~~y-i~~---g~~~s~~e~~~~i~~  321 (367)
T PLN02686        287 HVCVYEAMGNKTAFGRY-ICF---DHVVSREDEAEELAR  321 (367)
T ss_pred             HHHHHhccCCCCCCCcE-EEe---CCCccHHHHHHHHHH
Confidence            99999853  2345567 776   588999999999875

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.96  E-value=3.6e-28  Score=204.43  Aligned_cols=204  Identities=28%  Similarity=0.379  Sum_probs=159.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCCCC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQP  147 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~~~  147 (296)
                      ||||||+||||++++++|+++|+.|+.+.|..........  ..++.++.+|+.| .+.+.++++. .+|+|||+|+...
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~dl~~-~~~~~~~~~~~~~d~vi~~a~~~~   77 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK--KLNVEFVIGDLTD-KEQLEKLLEKANIDVVIHLAAFSS   77 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH--HTTEEEEESETTS-HHHHHHHHHHHTESEEEEEBSSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc--cceEEEEEeeccc-cccccccccccCceEEEEeecccc
Confidence            7999999999999999999999999999888765432111  1289999999999 8999999987 4699999998753


Q ss_pred             C---C-CCcch--hHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH----
Q 022495          148 G---W-DLFAP--WKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR----  214 (296)
Q Consensus       148 ~---~-~~~~~--~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----  214 (296)
                      .   . .....  .+.   +++++++++.+++++|++||..+|+...+.+.+++... .+.+.|+.+|...|++++    
T Consensus        78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~-~~~~~Y~~~K~~~e~~~~~~~~  156 (236)
T PF01370_consen   78 NPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPI-NPLSPYGASKRAAEELLRDYAK  156 (236)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGC-CHSSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccc
Confidence            1   0 00111  111   99999999999999999999999998865555565544 778889999999998875    


Q ss_pred             HhCCcEEEEecCcccCCC----CCCc--------------eeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEE
Q 022495          215 KSGINYTIIRPGGLRNEP----PTGN--------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEII  276 (296)
Q Consensus       215 ~~~~~~~~lrp~~i~g~~----~~~~--------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~  276 (296)
                      +.+++++++||+.+||+.    ....              +...........++|++|+|++++.+++++...+++||++
T Consensus       157 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  157 KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred             ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            358999999999999988    1111              1222333445678999999999999999988677899984

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=2.6e-27  Score=211.18  Aligned_cols=224  Identities=19%  Similarity=0.248  Sum_probs=161.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+..+.......  ...+++++.+|++| .+.+.+++.+ +|+|||+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~d~Vih~   86 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE-EGSFDEAVKG-CDGVFHV   86 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC-HHHHHHHHcC-CCEEEEC
Confidence            478999999999999999999999999999999987654332211  13568899999999 8889999998 9999999


Q ss_pred             CCCCCCC------CCcch--hH--------HHHHHHHHHHcC-CCEEEEEccceeccCccC-----ccCChhh-hhh---
Q 022495          143 TGFQPGW------DLFAP--WK--------AINLVEACRKRG-VNRFILISSILVNGAAMG-----QILNPAY-IFL---  196 (296)
Q Consensus       143 ag~~~~~------~~~~~--~~--------~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~-----~~~~~~~-~~~---  196 (296)
                      |+.....      +....  .+        ..+++++|++.+ +++||++||.++|+....     .+.++.. .+.   
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~  166 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV  166 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence            9864321      11111  01        178899998875 789999999999985321     1223321 111   


Q ss_pred             ----hhhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCcee------e---cccCc---------c---cc
Q 022495          197 ----NVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNII------M---ETEDT---------L---YE  247 (296)
Q Consensus       197 ----~~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~~------~---~~~~~---------~---~~  247 (296)
                          .+.+.|+.+|.++|++++    +++++++++||+.+||+...+.+.      .   .+...         .   ..
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence                233479999999998764    469999999999999986432210      0   01000         0   12


Q ss_pred             CCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          248 GTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       248 ~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .++|++|+|++++.++..+... ..|+. +   +..+++.|+++.+.+
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~~-~~~~~-~---~~~~s~~el~~~i~~  289 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKAE-GRYIC-C---VDSYDMSELINHLSK  289 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCcC-ccEEe-c---CCCCCHHHHHHHHHH
Confidence            5899999999999999865433 35643 4   477999999999875

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.96  E-value=3.3e-27  Score=191.21  Aligned_cols=183  Identities=33%  Similarity=0.465  Sum_probs=150.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCCCC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG  148 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~  148 (296)
                      |+|+||||++|+.++++|+++|++|+++.|++++..+     ..+++++.+|+.| .+.+.+++++ +|+||+++|....
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d-~~~~~~al~~-~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDLFD-PDSVKAALKG-ADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCTTC-HHHHHHHHTT-SSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----ccccccceeeehh-hhhhhhhhhh-cchhhhhhhhhcc
Confidence            7999999999999999999999999999999988765     4799999999999 8999999999 9999999975444


Q ss_pred             CCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEecCcc
Q 022495          149 WDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGL  228 (296)
Q Consensus       149 ~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp~~i  228 (296)
                          .....+++++++++.+++++|++||.++|..........   ....+..|...|...|+++++.+++|+++||+++
T Consensus        74 ----~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~  146 (183)
T PF13460_consen   74 ----DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDE---DKPIFPEYARDKREAEEALRESGLNWTIVRPGWI  146 (183)
T ss_dssp             ----HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGG---TCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEE
T ss_pred             ----cccccccccccccccccccceeeeccccCCCCCcccccc---cccchhhhHHHHHHHHHHHHhcCCCEEEEECcEe
Confidence                233349999999999999999999999988654432111   1122366889999999999999999999999999


Q ss_pred             cCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          229 RNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       229 ~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      +++................++|+++|+|+++++++++
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  147 YGNPSRSYRLIKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             EBTTSSSEEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             EeCCCcceeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9987554444433444445799999999999998863

...

>PLN00016 RNA-binding protein; Provisional

Probab=99.96  E-value=2.6e-27  Score=212.95  Aligned_cols=214  Identities=15%  Similarity=0.187  Sum_probs=160.8

Q ss_pred             CCCCeEEEE----cCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--------CCCCCeEEEEcccCCChHHHHHH
Q 022495           64 VKQKKIFVA----GATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--------KDNPSLQIVKADVTEGSAKLSEA  131 (296)
Q Consensus        64 ~~~~~ilVt----Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~d~~~~~~~~  131 (296)
                      .++++||||    |||||||++|+++|+++|++|++++|+.........        ....+++++.+|+.| .+.+. .
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-~~~~~-~  127 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD-VKSKV-A  127 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH-HHhhh-c
Confidence            346899999    999999999999999999999999998764321110        012358999999877 43333 1


Q ss_pred             hcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHH
Q 022495          132 IGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQ  211 (296)
Q Consensus       132 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~  211 (296)
                      ..+ +|+|||+++..       ....++++++|++.|+++|||+||.++|+.....+..+.. +..+..    +|..+|.
T Consensus       128 ~~~-~d~Vi~~~~~~-------~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~-~~~p~~----sK~~~E~  194 (378)
T PLN00016        128 GAG-FDVVYDNNGKD-------LDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGD-AVKPKA----GHLEVEA  194 (378)
T ss_pred             cCC-ccEEEeCCCCC-------HHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCC-cCCCcc----hHHHHHH
Confidence            245 99999997631       2234899999999999999999999999865443333321 222222    7999999


Q ss_pred             HHHHhCCcEEEEecCcccCCCCCCc--------------eeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          212 YIRKSGINYTIIRPGGLRNEPPTGN--------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       212 ~~~~~~~~~~~lrp~~i~g~~~~~~--------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      ++++.+++++++||+++||+.....              +...........++|++|+|++++.++.++...+++||+.+
T Consensus       195 ~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~  274 (378)
T PLN00016        195 YLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVS  274 (378)
T ss_pred             HHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecC
Confidence            9999999999999999999753321              11112223335689999999999999998766678999998


Q ss_pred             CCCCCCCCHHHHHHHhhc
Q 022495          278 RVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       278 ~~~~~~~~~~el~~~i~~  295 (296)
                         ++.+++.|+++.+.+
T Consensus       275 ---~~~~s~~el~~~i~~  289 (378)
T PLN00016        275 ---DRAVTFDGMAKACAK  289 (378)
T ss_pred             ---CCccCHHHHHHHHHH
Confidence               688999999999875

>PLN02583 cinnamoyl-CoA reductase

Probab=99.96  E-value=1.2e-26  Score=202.10  Aligned_cols=225  Identities=17%  Similarity=0.185  Sum_probs=156.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh--hc---ccCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TT---LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ++++|+||||+||||++++++|+++|++|++++|+.....  ..   +.....+++++.+|++| .+.+.+++.+ +|.|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~~~~~l~~-~d~v   82 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLD-YHSILDALKG-CSGL   82 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCC-HHHHHHHHcC-CCEE
Confidence            4689999999999999999999999999999999643211  11   11113468999999999 8999999999 9999


Q ss_pred             EEcCCCCCCCCC--c--chhHH---HHHHHHHHHc-CCCEEEEEccceeccC--c-c--CccCChhhhh-----hhhhHH
Q 022495          140 VCATGFQPGWDL--F--APWKA---INLVEACRKR-GVNRFILISSILVNGA--A-M--GQILNPAYIF-----LNVFGL  201 (296)
Q Consensus       140 v~~ag~~~~~~~--~--~~~~~---~~~l~~~~~~-~~~~iV~~SS~~~~~~--~-~--~~~~~~~~~~-----~~~~~~  201 (296)
                      +|.++.......  .  ...+.   .++++++.+. ++++||++||.+++..  . .  ..+.++....     ......
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  162 (297)
T PLN02583         83 FCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW  162 (297)
T ss_pred             EEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccH
Confidence            998764332211  1  11111   9999999886 5889999999876431  1 1  1122332110     111236


Q ss_pred             HHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc--eeec---ccCccccCCcCHHHHHHHHHHHhcCCCCCCCe
Q 022495          202 TLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN--IIME---TEDTLYEGTISRDQVAEVAVEALLHPESSYKV  272 (296)
Q Consensus       202 y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~--~~~~---~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~  272 (296)
                      |+.+|..+|+++.    +.++++++|||+.+||+.....  ....   ........+++++|+|++++.+++.+...+ .
T Consensus       163 Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~-r  241 (297)
T PLN02583        163 HALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYG-R  241 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCC-c
Confidence            9999999999774    4699999999999999864321  1111   001112358999999999999999877655 6


Q ss_pred             EEEEeCCCCCCCCHHHHHHHhhc
Q 022495          273 VEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       273 ~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |.+.+   +....+.++++.+.+
T Consensus       242 ~~~~~---~~~~~~~~~~~~~~~  261 (297)
T PLN02583        242 YLCFN---HIVNTEEDAVKLAQM  261 (297)
T ss_pred             EEEec---CCCccHHHHHHHHHH
Confidence            87776   344446777777664

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.96  E-value=2.7e-27  Score=207.49  Aligned_cols=217  Identities=26%  Similarity=0.307  Sum_probs=166.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCC-CEEEEcCCCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDS-EAVVCATGFQ  146 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-d~vv~~ag~~  146 (296)
                      +||||||+||||++|++.|+++|++|++++|.........    .++.++.+|++| .+.+.+.+.+ . |+|||+|+..
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~-~~~~~~~~~~-~~d~vih~aa~~   75 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----SGVEFVVLDLTD-RDLVDELAKG-VPDAVIHLAAQS   75 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----cccceeeecccc-hHHHHHHHhc-CCCEEEEccccC
Confidence            4999999999999999999999999999999876654322    578999999999 7888888887 7 9999999876


Q ss_pred             CCCCCcc-------hhHH---HHHHHHHHHcCCCEEEEEccceeccCc-cCccCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 022495          147 PGWDLFA-------PWKA---INLVEACRKRGVNRFILISSILVNGAA-MGQILNPAYIFLNVFGLTLIAKLQAEQYIRK  215 (296)
Q Consensus       147 ~~~~~~~-------~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~-~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  215 (296)
                      .......       ..+.   ++++++|++.++++|||.||.++|+.. .+.+..++..+..|.+.|+.+|.++|+++..
T Consensus        76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~  155 (314)
T COG0451          76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRA  155 (314)
T ss_pred             chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHH
Confidence            5433211       1122   999999999899999998888877654 2223333323455555899999999998864


Q ss_pred             ----hCCcEEEEecCcccCCCCCCc----ee------ec-ccC--------ccccCCcCHHHHHHHHHHHhcCCCCCCCe
Q 022495          216 ----SGINYTIIRPGGLRNEPPTGN----II------ME-TED--------TLYEGTISRDQVAEVAVEALLHPESSYKV  272 (296)
Q Consensus       216 ----~~~~~~~lrp~~i~g~~~~~~----~~------~~-~~~--------~~~~~~i~~~Dva~~i~~~l~~~~~~~~~  272 (296)
                          .+++++++||+.+||+.....    ..      .. ...        .....+++++|++++++.+++++...  .
T Consensus       156 ~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~  233 (314)
T COG0451         156 YARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG--V  233 (314)
T ss_pred             HHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc--E
Confidence                469999999999999875543    11      01 111        11124899999999999999987654  8


Q ss_pred             EEEEeCCCCC-CCCHHHHHHHhhc
Q 022495          273 VEIISRVDAP-KRSYEDLFGSIKQ  295 (296)
Q Consensus       273 ~~i~~~~~~~-~~~~~el~~~i~~  295 (296)
                      ||+++   +. ..+++|+++.+.+
T Consensus       234 ~ni~~---~~~~~~~~e~~~~~~~  254 (314)
T COG0451         234 FNIGS---GTAEITVRELAEAVAE  254 (314)
T ss_pred             EEeCC---CCCcEEHHHHHHHHHH
Confidence            99988   55 8999999998864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.95  E-value=3.2e-27  Score=226.82  Aligned_cols=225  Identities=18%  Similarity=0.179  Sum_probs=165.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCc--chhhhccc-CCCCCeEEEEcccCCChHHHHHHh--cCCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDL--DKAKTTLS-KDNPSLQIVKADVTEGSAKLSEAI--GDDSE  137 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~--~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~--~~~~d  137 (296)
                      ++|+||||||+||||++|++.|+++  |++|++++|..  .....+.. ....+++++.+|++| .+.+.+++  .+ +|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~~-~D   82 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS-ADLVNYLLITEG-ID   82 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCC-hHHHHHHHhhcC-CC
Confidence            4689999999999999999999998  68899988753  12211111 123579999999999 78887766  45 99


Q ss_pred             EEEEcCCCCCCCCC----cchh--HH---HHHHHHHHHcC-CCEEEEEccceeccCccCccC--ChhhhhhhhhHHHHHH
Q 022495          138 AVVCATGFQPGWDL----FAPW--KA---INLVEACRKRG-VNRFILISSILVNGAAMGQIL--NPAYIFLNVFGLTLIA  205 (296)
Q Consensus       138 ~vv~~ag~~~~~~~----~~~~--~~---~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~--~~~~~~~~~~~~y~~s  205 (296)
                      +|||+|+.......    ....  ++   .++++++++.+ +++|||+||..+||.......  ..+..+..|.+.|+.+
T Consensus        83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s  162 (668)
T PLN02260         83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT  162 (668)
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence            99999996542211    1111  11   89999999987 889999999999987543221  1222234466789999


Q ss_pred             HHHHHHHHH----HhCCcEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          206 KLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       206 K~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      |.++|.+++    +++++++++||+.+||+.....               +.+.+.......++|++|+|+++..++...
T Consensus       163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~  242 (668)
T PLN02260        163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG  242 (668)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC
Confidence            999999875    3589999999999999864321               111122223346899999999999888765


Q ss_pred             CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          267 ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       267 ~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      . .+.+||+++   ++.+++.|+++.+.+
T Consensus       243 ~-~~~vyni~~---~~~~s~~el~~~i~~  267 (668)
T PLN02260        243 E-VGHVYNIGT---KKERRVIDVAKDICK  267 (668)
T ss_pred             C-CCCEEEECC---CCeeEHHHHHHHHHH
Confidence            4 457999998   688999999999875

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.95  E-value=2e-26  Score=210.75  Aligned_cols=223  Identities=36%  Similarity=0.553  Sum_probs=166.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC------------CCCCeEEEEcccCCChHHHHHH
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK------------DNPSLQIVKADVTEGSAKLSEA  131 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------------~~~~~~~~~~D~~d~~~~~~~~  131 (296)
                      .++++||||||+|+||++++++|+++|++|++++|+.++...+...            ...++.++.+|++| .+.+.++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-~esI~~a  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-PDQIGPA  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC-HHHHHHH
Confidence            4578999999999999999999999999999999998776533210            11358899999999 8999999


Q ss_pred             hcCCCCEEEEcCCCCCCC--CCcchh--H---HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          132 IGDDSEAVVCATGFQPGW--DLFAPW--K---AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       132 ~~~~~d~vv~~ag~~~~~--~~~~~~--~---~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      +++ +|+||||+|.....  +.....  +   ..+++++|++.+++|||++||++++....  .. .   ..+....|..
T Consensus       157 Lgg-iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~--p~-~---~~~sk~~~~~  229 (576)
T PLN03209        157 LGN-ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF--PA-A---ILNLFWGVLC  229 (576)
T ss_pred             hcC-CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc--cc-c---chhhHHHHHH
Confidence            999 99999999865321  111111  1   28999999999999999999987531111  00 0   1234556788


Q ss_pred             HHHHHHHHHHHhCCcEEEEecCcccCCCCC----CceeecccCccccCCcCHHHHHHHHHHHhcCCC-CCCCeEEEEeCC
Q 022495          205 AKLQAEQYIRKSGINYTIIRPGGLRNEPPT----GNIIMETEDTLYEGTISRDQVAEVAVEALLHPE-SSYKVVEIISRV  279 (296)
Q Consensus       205 sK~~~e~~~~~~~~~~~~lrp~~i~g~~~~----~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~-~~~~~~~i~~~~  279 (296)
                      .|..+|+++++.|++|++||||++.++...    +.+..........+.+.++|||++++.++.++. ..++++.+....
T Consensus       230 ~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~  309 (576)
T PLN03209        230 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAET  309 (576)
T ss_pred             HHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCC
Confidence            899999999999999999999999875322    222222222233567999999999999998665 567899999976


Q ss_pred             CCCCCCHHHHHHHhh
Q 022495          280 DAPKRSYEDLFGSIK  294 (296)
Q Consensus       280 ~~~~~~~~el~~~i~  294 (296)
                      ......+.++++.|-
T Consensus       310 ~~p~~~~~~~~~~ip  324 (576)
T PLN03209        310 TAPLTPMEELLAKIP  324 (576)
T ss_pred             CCCCCCHHHHHHhcc
Confidence            555678888887653

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.95  E-value=7.7e-27  Score=205.91  Aligned_cols=219  Identities=22%  Similarity=0.251  Sum_probs=162.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |+|+||||+||||+++++.|+++|++|++++|+++.....   ...+++++.+|++| .+.+.+++++ +|+|||+|+..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~D~~~-~~~l~~~~~~-~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL---EGLDVEIVEGDLRD-PASLRKAVAG-CRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc---ccCCceEEEeeCCC-HHHHHHHHhC-CCEEEEeceec
Confidence            4799999999999999999999999999999987654322   12468999999999 8999999998 99999999754


Q ss_pred             CCCCC--cchhH--H---HHHHHHHHHcCCCEEEEEccceeccCc-cCccCChhhh--hhhhhHHHHHHHHHHHHHHHH-
Q 022495          147 PGWDL--FAPWK--A---INLVEACRKRGVNRFILISSILVNGAA-MGQILNPAYI--FLNVFGLTLIAKLQAEQYIRK-  215 (296)
Q Consensus       147 ~~~~~--~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~-~~~~~~~~~~--~~~~~~~y~~sK~~~e~~~~~-  215 (296)
                      ..+..  .....  .   .++++++++.++++||++||..+|+.. .+.+.+++..  +....+.|+.+|.++|+++++ 
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  155 (328)
T TIGR03466        76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEM  155 (328)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHH
Confidence            32211  11111  1   889999999999999999999999853 2333333322  112245799999999988764 


Q ss_pred             ---hCCcEEEEecCcccCCCCCCc-----eee-------cccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCC
Q 022495          216 ---SGINYTIIRPGGLRNEPPTGN-----IIM-------ETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVD  280 (296)
Q Consensus       216 ---~~~~~~~lrp~~i~g~~~~~~-----~~~-------~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~  280 (296)
                         .+++++++||+.+||+.....     +..       .........+++++|+|++++.++..+. .+..|++.    
T Consensus       156 ~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~~~----  230 (328)
T TIGR03466       156 AAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGR-IGERYILG----  230 (328)
T ss_pred             HHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCC-CCceEEec----
Confidence               589999999999999764321     100       0001112358999999999999998754 46677664    


Q ss_pred             CCCCCHHHHHHHhhc
Q 022495          281 APKRSYEDLFGSIKQ  295 (296)
Q Consensus       281 ~~~~~~~el~~~i~~  295 (296)
                      ++.+++.|+++.+.+
T Consensus       231 ~~~~s~~e~~~~i~~  245 (328)
T TIGR03466       231 GENLTLKQILDKLAE  245 (328)
T ss_pred             CCCcCHHHHHHHHHH
Confidence            478999999998864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.95  E-value=8.6e-27  Score=204.49  Aligned_cols=220  Identities=18%  Similarity=0.116  Sum_probs=160.7

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcc-----hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEE
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLD-----KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAV  139 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~v  139 (296)
                      +|+||||||+||++++++|+++|  ++|++++|...     ......  ...++.++.+|++| .+.+.+++++ ++|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE--DNPRYRFVKGDIGD-RELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc--cCCCcEEEEcCCcC-HHHHHHHHhhcCCCEE
Confidence            58999999999999999999987  78998876421     111111  12468899999999 8999988876 58999


Q ss_pred             EEcCCCCCCCC----Ccchh--HH---HHHHHHHHHcCCC-EEEEEccceeccCccCc-cCChhhhhhhhhHHHHHHHHH
Q 022495          140 VCATGFQPGWD----LFAPW--KA---INLVEACRKRGVN-RFILISSILVNGAAMGQ-ILNPAYIFLNVFGLTLIAKLQ  208 (296)
Q Consensus       140 v~~ag~~~~~~----~~~~~--~~---~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~-~~~~~~~~~~~~~~y~~sK~~  208 (296)
                      ||+|+......    .....  +.   .++++++++.+.+ ++|++||..+||..... +.. +..+..+.+.|+.+|..
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~-e~~~~~~~~~Y~~sK~~  156 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFT-ETTPLAPSSPYSASKAA  156 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcC-CCCCCCCCCchHHHHHH
Confidence            99998643211    11111  11   7899999887543 89999999999865432 222 22345566789999999


Q ss_pred             HHHHHH----HhCCcEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHHHHHHHHHHhcCCCCC
Q 022495          209 AEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESS  269 (296)
Q Consensus       209 ~e~~~~----~~~~~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~  269 (296)
                      +|.+++    +.+++++++||+.+||+.....               +...........++|++|+|+++..++.... .
T Consensus       157 ~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~  235 (317)
T TIGR01181       157 SDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-V  235 (317)
T ss_pred             HHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-C
Confidence            998775    4689999999999999753211               0111112233468999999999999987643 4


Q ss_pred             CCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          270 YKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       270 ~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.+||+++   +..+++.|+++.+.+
T Consensus       236 ~~~~~~~~---~~~~s~~~~~~~i~~  258 (317)
T TIGR01181       236 GETYNIGG---GNERTNLEVVETILE  258 (317)
T ss_pred             CceEEeCC---CCceeHHHHHHHHHH
Confidence            57999988   688999999999875

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.95  E-value=3.4e-27  Score=206.63  Aligned_cols=212  Identities=17%  Similarity=0.204  Sum_probs=149.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHH-HHHHhc-----CCCCEEE
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAK-LSEAIG-----DDSEAVV  140 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~-~~~~~~-----~~~d~vv  140 (296)
                      ||||||+||||++|+++|+++|++|+++.|+......       ...+..+|+.|.  .+. +.+++.     + +|+||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~d~Vi   73 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-------FVNLVDLDIADYMDKEDFLAQIMAGDDFGD-IEAIF   73 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-------HHhhhhhhhhhhhhHHHHHHHHhcccccCC-ccEEE
Confidence            7999999999999999999999987777776532111       012234555551  233 333432     4 99999


Q ss_pred             EcCCCCCCC--CCcchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHH
Q 022495          141 CATGFQPGW--DLFAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI  213 (296)
Q Consensus       141 ~~ag~~~~~--~~~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~  213 (296)
                      |+|+.....  +......  .   .+++++|++.++ +|||+||.++|+...+.+.++ ..+..|.+.|+.+|.++|+++
T Consensus        74 h~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E-~~~~~p~~~Y~~sK~~~E~~~  151 (308)
T PRK11150         74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEE-REYEKPLNVYGYSKFLFDEYV  151 (308)
T ss_pred             ECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCcc-CCCCCCCCHHHHHHHHHHHHH
Confidence            999853321  1111111  1   899999999987 799999999998764433333 334566788999999999877


Q ss_pred             HH----hCCcEEEEecCcccCCCCCC--ce------------------eecccCccccCCcCHHHHHHHHHHHhcCCCCC
Q 022495          214 RK----SGINYTIIRPGGLRNEPPTG--NI------------------IMETEDTLYEGTISRDQVAEVAVEALLHPESS  269 (296)
Q Consensus       214 ~~----~~~~~~~lrp~~i~g~~~~~--~~------------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~  269 (296)
                      ++    .+++++++||+.+||+....  .+                  +..+.......++|++|+|++++.+++...  
T Consensus       152 ~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~--  229 (308)
T PRK11150        152 RQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV--  229 (308)
T ss_pred             HHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC--
Confidence            64    58999999999999975321  10                  001111223468999999999999887643  


Q ss_pred             CCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          270 YKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       270 ~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.+||+++   +..+++.|+++.+.+
T Consensus       230 ~~~yni~~---~~~~s~~el~~~i~~  252 (308)
T PRK11150        230 SGIFNCGT---GRAESFQAVADAVLA  252 (308)
T ss_pred             CCeEEcCC---CCceeHHHHHHHHHH
Confidence            45899988   688999999999865

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.95  E-value=1.1e-26  Score=204.59  Aligned_cols=208  Identities=21%  Similarity=0.288  Sum_probs=153.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccC-CCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++|+||||||+||||+++++.|+++|  ++|++++|+..+....... ...++.++.+|++| .+.+.+++++ +|+|||
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~~~~-iD~Vih   80 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD-KERLTRALRG-VDYVVH   80 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHhc-CCEEEE
Confidence            57899999999999999999999986  7899999876543321110 12468999999999 8999999998 999999


Q ss_pred             cCCCCCCC----CCcchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH
Q 022495          142 ATGFQPGW----DLFAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY  212 (296)
Q Consensus       142 ~ag~~~~~----~~~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  212 (296)
                      +||.....    +......  .   .++++++++.++++||++||...+               .|.+.|+.+|.++|.+
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~---------------~p~~~Y~~sK~~~E~l  145 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA---------------NPINLYGATKLASDKL  145 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC---------------CCCCHHHHHHHHHHHH
Confidence            99964321    1111111  1   899999999998999999996321               2345699999999987


Q ss_pred             HH-------HhCCcEEEEecCcccCCCCC-----------Cc--eeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCe
Q 022495          213 IR-------KSGINYTIIRPGGLRNEPPT-----------GN--IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKV  272 (296)
Q Consensus       213 ~~-------~~~~~~~~lrp~~i~g~~~~-----------~~--~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~  272 (296)
                      ++       +.|++++++|||+++|+...           +.  +... .......|++++|++++++.+++... .+.+
T Consensus       146 ~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~~~~-~~~~  223 (324)
T TIGR03589       146 FVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLERML-GGEI  223 (324)
T ss_pred             HHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHhhCC-CCCE
Confidence            74       35899999999999997421           00  1111 11222458999999999999998643 3456


Q ss_pred             EEEEeCCCCCCCCHHHHHHHhhc
Q 022495          273 VEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       273 ~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      | +..   +...++.|+++.+.+
T Consensus       224 ~-~~~---~~~~sv~el~~~i~~  242 (324)
T TIGR03589       224 F-VPK---IPSMKITDLAEAMAP  242 (324)
T ss_pred             E-ccC---CCcEEHHHHHHHHHh
Confidence            6 333   467899999998865

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.95  E-value=1.4e-26  Score=206.54  Aligned_cols=223  Identities=15%  Similarity=0.096  Sum_probs=158.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCc--chhhhccc-CCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDL--DKAKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~--~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      |+||||||+||||++++++|+++|++ |+++++..  ........ ....+++++.+|++| .+++.+++++ .+|+|||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICD-RAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCC-HHHHHHHHHhcCCCEEEE
Confidence            47999999999999999999999976 55445432  11111110 012457889999999 8999998864 4899999


Q ss_pred             cCCCCCCC----CCcch--hHH---HHHHHHHHHc---------CCCEEEEEccceeccCccC----------ccCChhh
Q 022495          142 ATGFQPGW----DLFAP--WKA---INLVEACRKR---------GVNRFILISSILVNGAAMG----------QILNPAY  193 (296)
Q Consensus       142 ~ag~~~~~----~~~~~--~~~---~~~l~~~~~~---------~~~~iV~~SS~~~~~~~~~----------~~~~~~~  193 (296)
                      +|+.....    .....  .+.   .+++++|++.         ++++||++||..+|+....          .+..+ .
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E-~  158 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE-T  158 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc-c
Confidence            99864311    11111  111   8999999864         4569999999999985321          11122 2


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQ  254 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~D  254 (296)
                      .+.+|.+.|+.+|.++|.+++    +++++++++|++.+||+.....               +...........+++++|
T Consensus       159 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D  238 (352)
T PRK10084        159 TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED  238 (352)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHH
Confidence            345677889999999998774    4689999999999999864211               111122233456899999


Q ss_pred             HHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          255 VAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       255 va~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +|+++..++..+. .+.+||+++   ++..++.|+++.+.+
T Consensus       239 ~a~a~~~~l~~~~-~~~~yni~~---~~~~s~~~~~~~i~~  275 (352)
T PRK10084        239 HARALYKVVTEGK-AGETYNIGG---HNEKKNLDVVLTICD  275 (352)
T ss_pred             HHHHHHHHHhcCC-CCceEEeCC---CCcCcHHHHHHHHHH
Confidence            9999998887643 467999998   688999999988754

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=2.6e-26  Score=192.70  Aligned_cols=203  Identities=21%  Similarity=0.261  Sum_probs=164.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |+|||||++|++|.+|++.|. .+++|+.++|..                  +|++| .+.+.+.+.+ ++|+|||+|++
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------~Ditd-~~~v~~~i~~~~PDvVIn~AAy   60 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE------------------LDITD-PDAVLEVIRETRPDVVINAAAY   60 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------ccccC-hHHHHHHHHhhCCCEEEECccc
Confidence            349999999999999999998 668999987754                  79999 8999999987 79999999997


Q ss_pred             CCCCCCcch----hHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          146 QPGWDLFAP----WKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       146 ~~~~~~~~~----~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      ..-...+..    +.+     .+++++|++.|. ++||+||-+||.+..+.+..|.+ +.+|.+.||.||.+.|..+++.
T Consensus        61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D-~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          61 TAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETD-TPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             cccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCC-CCCChhhhhHHHHHHHHHHHHh
Confidence            543222111    112     999999999996 89999999999888876666654 5778999999999999999999


Q ss_pred             CCcEEEEecCcccCCCCCCce-----------eecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCC
Q 022495          217 GINYTIIRPGGLRNEPPTGNI-----------IMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~~~-----------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~  285 (296)
                      +-+..+||.+++||....+..           ......+.+..+++..|+|+++..++...... .+|++.+   ....|
T Consensus       139 ~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~-~~yH~~~---~g~~S  214 (281)
T COG1091         139 GPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEG-GVYHLVN---SGECS  214 (281)
T ss_pred             CCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccC-cEEEEeC---CCccc
Confidence            999999999999998654332           11223445567899999999999999876543 4999998   35589


Q ss_pred             HHHHHHHhhc
Q 022495          286 YEDLFGSIKQ  295 (296)
Q Consensus       286 ~~el~~~i~~  295 (296)
                      |-|+++.|.+
T Consensus       215 wydfa~~I~~  224 (281)
T COG1091         215 WYEFAKAIFE  224 (281)
T ss_pred             HHHHHHHHHH
Confidence            9999998865

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.2e-26  Score=219.22  Aligned_cols=223  Identities=21%  Similarity=0.243  Sum_probs=161.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHH--HCCCeEEEEEcCcchh--hhcccC-CCCCeEEEEcccCCC-----hHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLL--AKGFAVKAGVRDLDKA--KTTLSK-DNPSLQIVKADVTEG-----SAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~--~~g~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~~D~~d~-----~~~~~~~~~~~~  136 (296)
                      |+|||||||||||++|+++|+  ++|++|++++|+....  ...... ...+++++.+|++|+     .+.+.++ .+ +
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~-~   78 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD-I   78 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC-C
Confidence            489999999999999999999  5799999999975332  111110 125789999999983     1334444 77 9


Q ss_pred             CEEEEcCCCCCCCCCcc---hhHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh--hhhhhhHHHHHHHHH
Q 022495          137 EAVVCATGFQPGWDLFA---PWKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY--IFLNVFGLTLIAKLQ  208 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~---~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~--~~~~~~~~y~~sK~~  208 (296)
                      |+|||||+.........   ..+.   .+++++|++.++++|||+||..+||...+.. .++.  .+.++.+.|+.+|++
T Consensus        79 D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~-~e~~~~~~~~~~~~Y~~sK~~  157 (657)
T PRK07201         79 DHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVF-REDDFDEGQGLPTPYHRTKFE  157 (657)
T ss_pred             CEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCcc-ccccchhhcCCCCchHHHHHH
Confidence            99999998643222111   1111   8999999999999999999999998654322 2221  122334679999999


Q ss_pred             HHHHHHH-hCCcEEEEecCcccCCCCCCcee-----------------ec------ccCccccCCcCHHHHHHHHHHHhc
Q 022495          209 AEQYIRK-SGINYTIIRPGGLRNEPPTGNII-----------------ME------TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       209 ~e~~~~~-~~~~~~~lrp~~i~g~~~~~~~~-----------------~~------~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      +|+++++ .+++++++||+.+||+...+...                 ..      ........+++++|+++++..++.
T Consensus       158 ~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~  237 (657)
T PRK07201        158 AEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH  237 (657)
T ss_pred             HHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc
Confidence            9999874 68999999999999975432110                 00      011122357999999999999988


Q ss_pred             CCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          265 HPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       265 ~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .+...+++||+++   ++++++.|+++.+.+
T Consensus       238 ~~~~~g~~~ni~~---~~~~s~~el~~~i~~  265 (657)
T PRK07201        238 KDGRDGQTFHLTD---PKPQRVGDIYNAFAR  265 (657)
T ss_pred             CcCCCCCEEEeCC---CCCCcHHHHHHHHHH
Confidence            7666788999998   688999999998865

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.95  E-value=3.6e-26  Score=199.85  Aligned_cols=204  Identities=18%  Similarity=0.172  Sum_probs=151.4

Q ss_pred             EEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCCCCC
Q 022495           70 FVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQPG  148 (296)
Q Consensus        70 lVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~~~~  148 (296)
                      |||||+||||++|++.|+++|++|+++.+.                 ..+|++| .+.+.++++. ++|+|||||+....
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------~~~Dl~~-~~~l~~~~~~~~~d~Vih~A~~~~~   62 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------KELDLTR-QADVEAFFAKEKPTYVILAAAKVGG   62 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------ccCCCCC-HHHHHHHHhccCCCEEEEeeeeecc
Confidence            699999999999999999999988765432                 1489999 8889988875 48999999985321


Q ss_pred             -----CCCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh---hhhhhH-HHHHHHHHHHHHHH
Q 022495          149 -----WDLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI---FLNVFG-LTLIAKLQAEQYIR  214 (296)
Q Consensus       149 -----~~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~---~~~~~~-~y~~sK~~~e~~~~  214 (296)
                           ........     ..+++++|++.+++++|++||..+|+.....+.+|+..   +..|.+ .|+.+|.++|++++
T Consensus        63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~  142 (306)
T PLN02725         63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQ  142 (306)
T ss_pred             cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHH
Confidence                 11111111     18999999999999999999999999765555555432   233333 59999999997664


Q ss_pred             ----HhCCcEEEEecCcccCCCCCC-----ce------------------ee-cccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          215 ----KSGINYTIIRPGGLRNEPPTG-----NI------------------IM-ETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       215 ----~~~~~~~~lrp~~i~g~~~~~-----~~------------------~~-~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                          +.+++++++||+.+||+....     ..                  .. .........++|++|++++++.++..+
T Consensus       143 ~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~  222 (306)
T PLN02725        143 AYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRY  222 (306)
T ss_pred             HHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcc
Confidence                469999999999999985320     00                  00 111222346899999999999999865


Q ss_pred             CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          267 ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       267 ~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .. ...||+++   +..+++.|+++.+.+
T Consensus       223 ~~-~~~~ni~~---~~~~s~~e~~~~i~~  247 (306)
T PLN02725        223 SG-AEHVNVGS---GDEVTIKELAELVKE  247 (306)
T ss_pred             cc-CcceEeCC---CCcccHHHHHHHHHH
Confidence            43 35678877   689999999999865

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=5.2e-26  Score=190.65  Aligned_cols=226  Identities=19%  Similarity=0.216  Sum_probs=171.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc----hhhhc--ccCCCCCeEEEEcccCCChHHHHHHhcC-CCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD----KAKTT--LSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~  138 (296)
                      .++||||||+||||+|.+.+|+++|+.|++++--..    .....  +.....++.++++|++| .+.+++.|+. ++|.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D-~~~L~kvF~~~~fd~   80 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLND-AEALEKLFSEVKFDA   80 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCC-HHHHHHHHhhcCCce
Confidence            579999999999999999999999999999864321    11111  11134789999999999 9999999987 8999


Q ss_pred             EEEcCCCCCCCCCcc----hhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHH
Q 022495          139 VVCATGFQPGWDLFA----PWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       139 vv~~ag~~~~~~~~~----~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~  209 (296)
                      |+|.|+.....+..+    .+..     .++++.|++.+++.+||.||+.+||....-++.+..+...|.+.|+.+|.+.
T Consensus        81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~i  160 (343)
T KOG1371|consen   81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAI  160 (343)
T ss_pred             EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHH
Confidence            999998654332221    1111     9999999999999999999999999988777666655445899999999999


Q ss_pred             HHHHHH----hCCcEEEEecCcccCCCCCCce-----------e----------------ec-----ccCccccCCcCHH
Q 022495          210 EQYIRK----SGINYTIIRPGGLRNEPPTGNI-----------I----------------ME-----TEDTLYEGTISRD  253 (296)
Q Consensus       210 e~~~~~----~~~~~~~lrp~~i~g~~~~~~~-----------~----------------~~-----~~~~~~~~~i~~~  253 (296)
                      |+.+..    .++.++.||...++|....+.+           .                ..     .......+.+++-
T Consensus       161 E~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~  240 (343)
T KOG1371|consen  161 EEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVL  240 (343)
T ss_pred             HHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeE
Confidence            998864    4688999999998884332221           0                00     0112224578888


Q ss_pred             HHHHHHHHHhcCCCC--CCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          254 QVAEVAVEALLHPES--SYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       254 Dva~~i~~~l~~~~~--~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |.|+..+.++.....  ...+||++.   +...++.||+..+++
T Consensus       241 Dla~~h~~al~k~~~~~~~~i~Nlgt---g~g~~V~~lv~a~~k  281 (343)
T KOG1371|consen  241 DLADGHVAALGKLRGAAEFGVYNLGT---GKGSSVLELVTAFEK  281 (343)
T ss_pred             ehHHHHHHHhhccccchheeeEeecC---CCCccHHHHHHHHHH
Confidence            999999999987553  234777777   788899999998876

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.94  E-value=1.8e-25  Score=196.90  Aligned_cols=223  Identities=23%  Similarity=0.292  Sum_probs=161.1

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG  144 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag  144 (296)
                      +||||||+|+||++++++|+++|++|++++|......+....  ...+++++.+|++| .+.+.+++.. ++|+||||||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vv~~ag   79 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRD-RELLDRLFEEHKIDAVIHFAG   79 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCC-HHHHHHHHHhCCCcEEEECcc
Confidence            589999999999999999999999999876643322111110  11257889999999 8889888863 4999999998


Q ss_pred             CCCCCCC----cchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 022495          145 FQPGWDL----FAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK  215 (296)
Q Consensus       145 ~~~~~~~----~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  215 (296)
                      .......    ....  +.   .+++++|.+.+++++|++||..+|+.....+..++ .+..+...|+.+|.++|.+++.
T Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~-~~~~~~~~y~~sK~~~e~~~~~  158 (328)
T TIGR01179        80 LIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISED-SPLGPINPYGRSKLMSERILRD  158 (328)
T ss_pred             ccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCcccc-CCCCCCCchHHHHHHHHHHHHH
Confidence            6432111    1111  11   88899999998889999999999986544333333 2344677899999999987753


Q ss_pred             -----hCCcEEEEecCcccCCCCCCc----------ee---------------ecc------cCccccCCcCHHHHHHHH
Q 022495          216 -----SGINYTIIRPGGLRNEPPTGN----------II---------------MET------EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       216 -----~~~~~~~lrp~~i~g~~~~~~----------~~---------------~~~------~~~~~~~~i~~~Dva~~i  259 (296)
                           .+++++++||+.+||+...+.          +.               ..+      .......+++++|+|+++
T Consensus       159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~  238 (328)
T TIGR01179       159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH  238 (328)
T ss_pred             HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence                 689999999999999742210          00               000      111224689999999999


Q ss_pred             HHHhcCC--CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          260 VEALLHP--ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       260 ~~~l~~~--~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.++...  ...+++||+.+   +..+++.|+++.+.+
T Consensus       239 ~~~~~~~~~~~~~~~~n~~~---~~~~s~~ei~~~~~~  273 (328)
T TIGR01179       239 LAALEYLLNGGESHVYNLGY---GQGFSVLEVIEAFKK  273 (328)
T ss_pred             HHHHhhhhcCCCcceEEcCC---CCcccHHHHHHHHHH
Confidence            9988752  23467899988   688999999999875

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.94  E-value=3.7e-27  Score=203.67  Aligned_cols=205  Identities=21%  Similarity=0.287  Sum_probs=144.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |+||||||+|+||++|++.|.++|++|+.+.|.                  ..|++| .+.+.+.+.. ++|+|||||+.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------~~dl~d-~~~~~~~~~~~~pd~Vin~aa~   61 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------DLDLTD-PEAVAKLLEAFKPDVVINCAAY   61 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------CS-TTS-HHHHHHHHHHH--SEEEE----
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------hcCCCC-HHHHHHHHHHhCCCeEecccee
Confidence            689999999999999999999999999988665                  579999 8888888876 69999999987


Q ss_pred             CCCC----CCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          146 QPGW----DLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       146 ~~~~----~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      ....    ++...+.+     .+++++|.+.+. ++||+||..||++..+.+..|+. +.+|.+.||.+|.++|+.+++.
T Consensus        62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d-~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   62 TNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDD-PPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS-----SSHHHHHHHHHHHHHHHH
T ss_pred             ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCC-CCCCCCHHHHHHHHHHHHHHHh
Confidence            5321    11112221     899999999986 99999999999887666655544 4578899999999999999886


Q ss_pred             CCcEEEEecCcccCCCCCCce-----------eecccCccccCCcCHHHHHHHHHHHhcCCCC---CCCeEEEEeCCCCC
Q 022495          217 GINYTIIRPGGLRNEPPTGNI-----------IMETEDTLYEGTISRDQVAEVAVEALLHPES---SYKVVEIISRVDAP  282 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~~~-----------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~---~~~~~~i~~~~~~~  282 (296)
                      .-++.|+|++++||....+.+           .+....+.+..+++++|+|+++..+++....   ...+||+++   ++
T Consensus       140 ~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~---~~  216 (286)
T PF04321_consen  140 CPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSG---PE  216 (286)
T ss_dssp             -SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE------BS
T ss_pred             cCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEec---Cc
Confidence            669999999999998433221           1112234445789999999999999986532   346999999   68


Q ss_pred             CCCHHHHHHHhhc
Q 022495          283 KRSYEDLFGSIKQ  295 (296)
Q Consensus       283 ~~~~~el~~~i~~  295 (296)
                      .+++.|+++.+.+
T Consensus       217 ~~S~~e~~~~i~~  229 (286)
T PF04321_consen  217 RVSRYEFAEAIAK  229 (286)
T ss_dssp             -EEHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHH
Confidence            8999999998875

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02996 fatty acyl-CoA reductase

Probab=99.94  E-value=1.2e-25  Score=207.29  Aligned_cols=230  Identities=18%  Similarity=0.169  Sum_probs=160.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCC---CeEEEEEcCcchhh-------hcccC-----------------CCCCeEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKAK-------TTLSK-----------------DNPSLQI  116 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-------~~~~~-----------------~~~~~~~  116 (296)
                      +++|+|+|||||||||+++++.|++.+   .+|+++.|......       ++...                 ...++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            468999999999999999999999864   36899999764211       11100                 0157899


Q ss_pred             EEcccCCC------hHHHHHHhcCCCCEEEEcCCCCCCCCCcc-h--hHH---HHHHHHHHHc-CCCEEEEEccceeccC
Q 022495          117 VKADVTEG------SAKLSEAIGDDSEAVVCATGFQPGWDLFA-P--WKA---INLVEACRKR-GVNRFILISSILVNGA  183 (296)
Q Consensus       117 ~~~D~~d~------~~~~~~~~~~~~d~vv~~ag~~~~~~~~~-~--~~~---~~~l~~~~~~-~~~~iV~~SS~~~~~~  183 (296)
                      +.+|++++      .+.+.+++++ +|+|||+|+......... .  .++   .+++++|++. ++++||++||.++||.
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~-vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~  167 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKE-IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE  167 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhC-CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence            99999841      3456777888 999999998654322211 1  112   8999999986 6889999999999987


Q ss_pred             ccCcc----CC--------------hhh-----------------------------h---hhhhhHHHHHHHHHHHHHH
Q 022495          184 AMGQI----LN--------------PAY-----------------------------I---FLNVFGLTLIAKLQAEQYI  213 (296)
Q Consensus       184 ~~~~~----~~--------------~~~-----------------------------~---~~~~~~~y~~sK~~~e~~~  213 (296)
                      ..+..    ..              ++.                             .   ...+.+.|+.||+++|.++
T Consensus       168 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv  247 (491)
T PLN02996        168 KSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLL  247 (491)
T ss_pred             CCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHH
Confidence            44210    00              000                             0   0112356999999999999


Q ss_pred             HH--hCCcEEEEecCcccCCCCCCc---------------------e-eecccCccccCCcCHHHHHHHHHHHhcCC--C
Q 022495          214 RK--SGINYTIIRPGGLRNEPPTGN---------------------I-IMETEDTLYEGTISRDQVAEVAVEALLHP--E  267 (296)
Q Consensus       214 ~~--~~~~~~~lrp~~i~g~~~~~~---------------------~-~~~~~~~~~~~~i~~~Dva~~i~~~l~~~--~  267 (296)
                      ++  .+++++++||+.|+|+.....                     . .+.+.......+++++|++++++.++...  .
T Consensus       248 ~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~  327 (491)
T PLN02996        248 GNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGG  327 (491)
T ss_pred             HHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhcc
Confidence            76  489999999999999743221                     0 01122233456899999999999988753  1


Q ss_pred             -CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          268 -SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       268 -~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                       ..+.+||+++. ..+++++.|+++.+.+
T Consensus       328 ~~~~~vYNi~s~-~~~~~s~~ei~~~~~~  355 (491)
T PLN02996        328 QGSEIIYHVGSS-LKNPVKFSNLHDFAYR  355 (491)
T ss_pred             CCCCcEEEecCC-CCCcccHHHHHHHHHH
Confidence             23568999971 1278999999998754

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.94  E-value=2e-25  Score=195.86  Aligned_cols=214  Identities=16%  Similarity=0.159  Sum_probs=153.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc----CCCCEEEEcC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG----DDSEAVVCAT  143 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~~~d~vv~~a  143 (296)
                      ||||||+||||+++++.|.++|+ +|++++|..... .+.   ......+.+|+++ .+.++.+.+    + +|+|||||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~---~~~~~~~~~d~~~-~~~~~~~~~~~~~~-~D~vvh~A   74 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL---NLADLVIADYIDK-EDFLDRLEKGAFGK-IEAIFHQG   74 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh---hhhheeeeccCcc-hhHHHHHHhhccCC-CCEEEECc
Confidence            69999999999999999999997 788887754321 111   0112456788888 676766654    5 99999999


Q ss_pred             CCCCCCC--Ccchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH-
Q 022495          144 GFQPGWD--LFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-  215 (296)
Q Consensus       144 g~~~~~~--~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-  215 (296)
                      +......  .....  +.   .+++++|++.++ +||++||..+|+.... ...++..+..+.+.|+.+|..+|.++++ 
T Consensus        75 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~  152 (314)
T TIGR02197        75 ACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVRRR  152 (314)
T ss_pred             cccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHHHH
Confidence            8643221  11111  11   889999999886 8999999999986543 2334333345677899999999988764 


Q ss_pred             -----hCCcEEEEecCcccCCCCCC-----cee--------------ec------ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          216 -----SGINYTIIRPGGLRNEPPTG-----NII--------------ME------TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       216 -----~~~~~~~lrp~~i~g~~~~~-----~~~--------------~~------~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                           .+++++++||+.+||+....     .+.              ..      ........++|++|++++++.++..
T Consensus       153 ~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~  232 (314)
T TIGR02197       153 VLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN  232 (314)
T ss_pred             hHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc
Confidence                 25789999999999986321     100              00      0111224689999999999999987


Q ss_pred             CCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          266 PESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       266 ~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                       . .+.+||+++   +.++++.|+++.+.+
T Consensus       233 -~-~~~~yni~~---~~~~s~~e~~~~i~~  257 (314)
T TIGR02197       233 -G-VSGIFNLGT---GRARSFNDLADAVFK  257 (314)
T ss_pred             -c-cCceEEcCC---CCCccHHHHHHHHHH
Confidence             3 456999988   689999999998865

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.94  E-value=4.9e-25  Score=197.07  Aligned_cols=224  Identities=21%  Similarity=0.253  Sum_probs=159.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchh------hhcccC------C-C-CCeEEEEcccCCC-----hH
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKA------KTTLSK------D-N-PSLQIVKADVTEG-----SA  126 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~------~~~~~~------~-~-~~~~~~~~D~~d~-----~~  126 (296)
                      +|+|||||||||++++++|+++|  ++|+++.|+.+..      .+.+..      . . .+++++.+|++++     .+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  6799999987532      111100      0 1 4799999999862     24


Q ss_pred             HHHHHhcCCCCEEEEcCCCCCCCCCcch---hHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh----hhh
Q 022495          127 KLSEAIGDDSEAVVCATGFQPGWDLFAP---WKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFL  196 (296)
Q Consensus       127 ~~~~~~~~~~d~vv~~ag~~~~~~~~~~---~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~----~~~  196 (296)
                      .+..+..+ +|+|||||+..........   .+.   .++++++.+.++++||++||.++|+........+..    ...
T Consensus        81 ~~~~~~~~-~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~  159 (367)
T TIGR01746        81 EWERLAEN-VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPP  159 (367)
T ss_pred             HHHHHHhh-CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccccccc
Confidence            56666777 9999999986442222111   111   889999999888899999999998764322111111    112


Q ss_pred             hhhHHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCCCce-----------------eecccCccccCCcCHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTGNI-----------------IMETEDTLYEGTISRDQVA  256 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~---~~~~~~~lrp~~i~g~~~~~~~-----------------~~~~~~~~~~~~i~~~Dva  256 (296)
                      .+.+.|+.+|+.+|.++++   .|++++++|||.++|+...+..                 ..+........+++++|+|
T Consensus       160 ~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva  239 (367)
T TIGR01746       160 GLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVA  239 (367)
T ss_pred             ccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHH
Confidence            2345799999999998864   4899999999999996332210                 0111111234589999999


Q ss_pred             HHHHHHhcCCCCC--CCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          257 EVAVEALLHPESS--YKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       257 ~~i~~~l~~~~~~--~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++++.++..+...  +++||+.+   +..+++.|+++.+.+
T Consensus       240 ~ai~~~~~~~~~~~~~~~~~v~~---~~~~s~~e~~~~i~~  277 (367)
T TIGR01746       240 RAIVALSSQPAASAGGPVFHVVN---PEPVSLDEFLEWLER  277 (367)
T ss_pred             HHHHHHHhCCCcccCCceEEecC---CCCCCHHHHHHHHHH
Confidence            9999998776532  67999998   689999999998864

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.93  E-value=1.4e-24  Score=188.06  Aligned_cols=195  Identities=22%  Similarity=0.296  Sum_probs=149.7

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc-----CC-CCEEEE
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-----DD-SEAVVC  141 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~~-~d~vv~  141 (296)
                      +|+||||||++|++++++|+++|++|++++|++++..      ..+++.+.+|+.| .+++.+++.     .. +|.|+|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~------~~~~~~~~~d~~d-~~~l~~a~~~~~~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA------GPNEKHVKFDWLD-EDTWDNPFSSDDGMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc------CCCCccccccCCC-HHHHHHHHhcccCcCCceeEEEE
Confidence            4899999999999999999999999999999987542      2467788999999 899999883     13 899999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh-CCcE
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS-GINY  220 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~-~~~~  220 (296)
                      +++....    .....++++++|++.|++|||++||..++...                   ..+...++++++. ++++
T Consensus        74 ~~~~~~~----~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------------------~~~~~~~~~l~~~~gi~~  130 (285)
T TIGR03649        74 VAPPIPD----LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-------------------PAMGQVHAHLDSLGGVEY  130 (285)
T ss_pred             eCCCCCC----hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-------------------chHHHHHHHHHhccCCCE
Confidence            9874321    12233889999999999999999997543210                   0123456677775 9999


Q ss_pred             EEEecCcccCCCCCC---------ceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHH
Q 022495          221 TIIRPGGLRNEPPTG---------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFG  291 (296)
Q Consensus       221 ~~lrp~~i~g~~~~~---------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~  291 (296)
                      +++||++++++....         ..+..........+++++|+|++++.++..+...++.|++.+   ++.+++.|+++
T Consensus       131 tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g---~~~~s~~eia~  207 (285)
T TIGR03649       131 TVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLG---PELLTYDDVAE  207 (285)
T ss_pred             EEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeC---CccCCHHHHHH
Confidence            999999888653211         111122233345799999999999999998776678899988   68999999999


Q ss_pred             Hhhc
Q 022495          292 SIKQ  295 (296)
Q Consensus       292 ~i~~  295 (296)
                      .+++
T Consensus       208 ~l~~  211 (285)
T TIGR03649       208 ILSR  211 (285)
T ss_pred             HHHH
Confidence            9875

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK05865 hypothetical protein; Provisional

Probab=99.93  E-value=1e-24  Score=209.04  Aligned_cols=192  Identities=17%  Similarity=0.254  Sum_probs=150.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |+|+||||+||||++++++|+++|++|++++|+....   .   ..++.++.+|++| .+.+.+++++ +|+|||||+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~---~~~v~~v~gDL~D-~~~l~~al~~-vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W---PSSADFIAADIRD-ATAVESAMTG-ADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c---ccCceEEEeeCCC-HHHHHHHHhC-CCEEEECCCcc
Confidence            5799999999999999999999999999999975321   1   1368899999999 8999999998 99999999854


Q ss_pred             CCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEecC
Q 022495          147 PGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG  226 (296)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp~  226 (296)
                      ............+++++|++.++++|||+||..                          |.++|+++++++++++++||+
T Consensus        73 ~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------------K~aaE~ll~~~gl~~vILRp~  126 (854)
T PRK05865         73 GRNDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------------QPRVEQMLADCGLEWVAVRCA  126 (854)
T ss_pred             cchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------------HHHHHHHHHHcCCCEEEEEec
Confidence            321100111128999999999999999999851                          788899998899999999999


Q ss_pred             cccCCCCCCce-------eec-ccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          227 GLRNEPPTGNI-------IME-TEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       227 ~i~g~~~~~~~-------~~~-~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++||+.....+       ... +.......++|++|+|++++.++..+...+.+||+++   +..+++.|+++.+.+
T Consensus       127 ~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgs---g~~~Si~EIae~l~~  200 (854)
T PRK05865        127 LIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAA---PGELTFRRIAAALGR  200 (854)
T ss_pred             eEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEEC---CCcccHHHHHHHHhh
Confidence            99998532111       111 1112223689999999999999876544567899998   688999999998864

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.93  E-value=5.8e-25  Score=180.35  Aligned_cols=223  Identities=16%  Similarity=0.168  Sum_probs=168.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCc-----chhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDL-----DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d  137 (296)
                      .++++||||.||||++.+..+...  ..+.+.++.-.     ..+.+..  ..++.+++++|+.| ...+...|.. ++|
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~--n~p~ykfv~~di~~-~~~~~~~~~~~~id   82 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR--NSPNYKFVEGDIAD-ADLVLYLFETEEID   82 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc--cCCCceEeeccccc-hHHHHhhhccCchh
Confidence            379999999999999999999986  45555554321     1111111  45889999999999 7877777755 799


Q ss_pred             EEEEcCCCCCCCC----Ccch-----hHHHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHH
Q 022495          138 AVVCATGFQPGWD----LFAP-----WKAINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKL  207 (296)
Q Consensus       138 ~vv~~ag~~~~~~----~~~~-----~~~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~  207 (296)
                      .|+|.|+..+...    ....     .....++++++..| +++||++||..|||+..+.....+....+|.+.|+++|+
T Consensus        83 ~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKa  162 (331)
T KOG0747|consen   83 TVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKA  162 (331)
T ss_pred             hhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHH
Confidence            9999998543211    1111     11189999999985 899999999999999877666645667888999999999


Q ss_pred             HHHHHHH----HhCCcEEEEecCcccCCCCCCce---------------eecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          208 QAEQYIR----KSGINYTIIRPGGLRNEPPTGNI---------------IMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       208 ~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~---------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      ++|.+++    +++++++++|-++||||.....-               .+.+.......+++++|+++++-.+++. +.
T Consensus       163 AaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-g~  241 (331)
T KOG0747|consen  163 AAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-GE  241 (331)
T ss_pred             HHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc-CC
Confidence            9998875    57999999999999998654321               1122223335699999999998877777 55


Q ss_pred             CCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          269 SYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       269 ~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .|++|||+.   ..+.+..|+++.|.+
T Consensus       242 ~geIYNIgt---d~e~~~~~l~k~i~e  265 (331)
T KOG0747|consen  242 LGEIYNIGT---DDEMRVIDLAKDICE  265 (331)
T ss_pred             ccceeeccC---cchhhHHHHHHHHHH
Confidence            688999999   477888888888764

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=1.6e-24  Score=177.69  Aligned_cols=221  Identities=17%  Similarity=0.184  Sum_probs=167.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ....+++|+||||.||||+|||..|..+|+.|++++--.......+.  ...++++.+.-|+.. +     ++.+ +|-|
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~-p-----l~~e-vD~I   95 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE-P-----LLKE-VDQI   95 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh-H-----HHHH-hhhh
Confidence            34467999999999999999999999999999999876554443222  134678888888776 3     5667 9999


Q ss_pred             EEcCCCCCCCC----Ccc--hhHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh----hhhhhHHHHHHH
Q 022495          140 VCATGFQPGWD----LFA--PWKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI----FLNVFGLTLIAK  206 (296)
Q Consensus       140 v~~ag~~~~~~----~~~--~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~----~~~~~~~y~~sK  206 (296)
                      +|.|.......    +..  ..+.   .+++-.|++.+ +||++.||..+||+....+..+.+.    |..+.+.|...|
T Consensus        96 yhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegK  174 (350)
T KOG1429|consen   96 YHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGK  174 (350)
T ss_pred             hhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHH
Confidence            99987543221    111  1111   88888888888 6999999999999976655544432    556788999999


Q ss_pred             HHHHHHHH----HhCCcEEEEecCcccCCCCC---C--------------ceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          207 LQAEQYIR----KSGINYTIIRPGGLRNEPPT---G--------------NIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       207 ~~~e~~~~----~~~~~~~~lrp~~i~g~~~~---~--------------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ..+|.++.    +.|+.+.|.|+.++||+.-.   +              .+.+.+.......|++++|+.+.++.+.++
T Consensus       175 r~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s  254 (350)
T KOG1429|consen  175 RVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMES  254 (350)
T ss_pred             HHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcC
Confidence            99998774    57999999999999998421   1              123334444445799999999999999998


Q ss_pred             CCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          266 PESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       266 ~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +...  .+|+++   ++.+|+.|+++++.+
T Consensus       255 ~~~~--pvNiGn---p~e~Tm~elAemv~~  279 (350)
T KOG1429|consen  255 DYRG--PVNIGN---PGEFTMLELAEMVKE  279 (350)
T ss_pred             CCcC--CcccCC---ccceeHHHHHHHHHH
Confidence            7643  499999   678999999998864

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.3e-24  Score=184.05  Aligned_cols=215  Identities=20%  Similarity=0.159  Sum_probs=150.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      ++|+|+||||+|+||++++++|+++|++|++++|+++...+........+.++++|++| .+++.+.+.+      ++|+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999999876654433223568889999999 7777665542      3899


Q ss_pred             EEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ||||||........    ..+.    .         +.+++.+++.+.+++|++||...+....            ....
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~~  148 (275)
T PRK08263         81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP------------MSGI  148 (275)
T ss_pred             EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC------------CccH
Confidence            99999975322111    1111    0         5666667777778999999987654321            2356


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-------ccc------CccccCC-cCHHHHHHHHH
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-------ETE------DTLYEGT-ISRDQVAEVAV  260 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-------~~~------~~~~~~~-i~~~Dva~~i~  260 (296)
                      |+.+|++.+.+.+       .+|+++++++||.+.++........       ...      ......+ ++++|+|++++
T Consensus       149 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~  228 (275)
T PRK08263        149 YHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALL  228 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence            9999999887653       3689999999999988654211100       000      0011234 88999999999


Q ss_pred             HHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          261 EALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       261 ~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .++..+...+. +.++..  +..+++.++.+.+.+
T Consensus       229 ~l~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~  260 (275)
T PRK08263        229 KLVDAENPPLR-LFLGSG--VLDLAKADYERRLAT  260 (275)
T ss_pred             HHHcCCCCCeE-EEeCch--HHHHHHHHHHHHHHH
Confidence            99987765444 333331  567888888877653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.92  E-value=6.2e-24  Score=177.41  Aligned_cols=192  Identities=19%  Similarity=0.219  Sum_probs=143.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC----CCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      .+++++++|||||++||.++|+.|+++|++|+++.|+.+++.++...    .+..+.++.+|++| .+.+.+....    
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhc
Confidence            34688999999999999999999999999999999999987754432    34568899999999 7777765532    


Q ss_pred             --CCCEEEEcCCCCCCCCCcc-hh---------HH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLFA-PW---------KA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~~-~~---------~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        .+|++|||||+.......+ .+         +.       +.+++-|.+.+.++||+++|...|-.            
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p------------  149 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP------------  149 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC------------
Confidence              4999999999754321111 00         11       88889999998899999999976542            


Q ss_pred             hhhhHHHHHHHHHHHHHH-------HHhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          196 LNVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~-------~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ....+.|++||+.+-.+-       +..|++++.|.||.+.+++................+++++|+|+..+..+...+
T Consensus       150 ~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         150 TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhcCC
Confidence            223678999999887554       347899999999999998764111100111112347999999999999998754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.92  E-value=5.4e-24  Score=172.92  Aligned_cols=194  Identities=19%  Similarity=0.213  Sum_probs=143.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCC-CCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN-PSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      +++|.++|||||++||.++|+.|.++|++|++..|+.++++++..... ..+.....|++| .+++.+++..      ++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence            357899999999999999999999999999999999998887664333 478999999999 7665544431      49


Q ss_pred             CEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||.......    .+.|..             +.+++.|.+++.++||++||++..-            ++...
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~------------~y~~~  150 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY------------PYPGG  150 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc------------cCCCC
Confidence            999999997554211    111211             8899999999888999999997421            22335


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee---cccCc--cccCCcCHHHHHHHHHHHhcCCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---ETEDT--LYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~---~~~~~--~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +.|+++|+++..+..       ..++|++.|.||.+-+...+.....   .....  .....+.++|+|+.+.+++..|.
T Consensus       151 ~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~  230 (246)
T COG4221         151 AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQ  230 (246)
T ss_pred             ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence            679999999987653       2689999999999865422211100   01111  12347999999999999999987


Q ss_pred             CCC
Q 022495          268 SSY  270 (296)
Q Consensus       268 ~~~  270 (296)
                      ...
T Consensus       231 ~vn  233 (246)
T COG4221         231 HVN  233 (246)
T ss_pred             ccc
Confidence            544

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.92  E-value=1.4e-23  Score=182.22  Aligned_cols=212  Identities=16%  Similarity=0.125  Sum_probs=144.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCCCC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPG  148 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~  148 (296)
                      ||||||+||||+++++.|+++|++|++++|++........   ..    ..|+.+  +.+.+.+.+ +|+|||+|+....
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~----~~~~~~--~~~~~~~~~-~D~Vvh~a~~~~~   70 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW---EG----YKPWAP--LAESEALEG-ADAVINLAGEPIA   70 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc---ee----eecccc--cchhhhcCC-CCEEEECCCCCcc
Confidence            6999999999999999999999999999998865432210   11    112222  335566778 9999999986432


Q ss_pred             ---CCCcchh-----H---HHHHHHHHHHcCCC--EEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHH--
Q 022495          149 ---WDLFAPW-----K---AINLVEACRKRGVN--RFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI--  213 (296)
Q Consensus       149 ---~~~~~~~-----~---~~~~l~~~~~~~~~--~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~--  213 (296)
                         +......     +   .++++++|++.+++  ++|++||+.+|+...+.+..++.. ..+.+.|+..+...|..+  
T Consensus        71 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~-~~~~~~~~~~~~~~e~~~~~  149 (292)
T TIGR01777        71 DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDS-PAGDDFLAELCRDWEEAAQA  149 (292)
T ss_pred             cccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccC-CCCCChHHHHHHHHHHHhhh
Confidence               1111000     1   28999999999863  566677777888655444444431 222333455555555543  


Q ss_pred             -HHhCCcEEEEecCcccCCCCCC--ce----e-----ecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCC
Q 022495          214 -RKSGINYTIIRPGGLRNEPPTG--NI----I-----METEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDA  281 (296)
Q Consensus       214 -~~~~~~~~~lrp~~i~g~~~~~--~~----~-----~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~  281 (296)
                       ++.+++++++||+.+||+....  .+    .     ..+......++++++|+|+++..+++.+.. ..+|++.+   +
T Consensus       150 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~---~  225 (292)
T TIGR01777       150 AEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVNATA---P  225 (292)
T ss_pred             chhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceEecC---C
Confidence             3468999999999999975310  00    0     011123345789999999999999987654 45899988   6


Q ss_pred             CCCCHHHHHHHhhc
Q 022495          282 PKRSYEDLFGSIKQ  295 (296)
Q Consensus       282 ~~~~~~el~~~i~~  295 (296)
                      ..+++.|+++.|.+
T Consensus       226 ~~~s~~di~~~i~~  239 (292)
T TIGR01777       226 EPVRNKEFAKALAR  239 (292)
T ss_pred             CccCHHHHHHHHHH
Confidence            89999999999865

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=8.9e-24  Score=173.42  Aligned_cols=218  Identities=22%  Similarity=0.255  Sum_probs=175.6

Q ss_pred             hhhccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           59 EENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        59 ~~~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      ..+.+.+|-.+.|+|||||+|+.+|.+|.+.|.+|++-.|..+.....++  +...++-+...|+.| +++++++++. .
T Consensus        54 GGRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~D-edSIr~vvk~-s  131 (391)
T KOG2865|consen   54 GGRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRD-EDSIRAVVKH-S  131 (391)
T ss_pred             CCcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCC-HHHHHHHHHh-C
Confidence            34456788899999999999999999999999999999998765443322  244689999999999 9999999998 9


Q ss_pred             CEEEEcCCCCCCCCCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHH
Q 022495          137 EAVVCATGFQPGWDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQ  211 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~  211 (296)
                      ++|||..|-..+.......++     ++++..|++.|+.|+|++|+.++.              ....+-|-.+|++.|.
T Consensus       132 NVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan--------------v~s~Sr~LrsK~~gE~  197 (391)
T KOG2865|consen  132 NVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN--------------VKSPSRMLRSKAAGEE  197 (391)
T ss_pred             cEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc--------------ccChHHHHHhhhhhHH
Confidence            999999996554333322222     899999999999999999998522              1223557789999999


Q ss_pred             HHHHhCCcEEEEecCcccCCCCC------------Cc-eeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeC
Q 022495          212 YIRKSGINYTIIRPGGLRNEPPT------------GN-IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR  278 (296)
Q Consensus       212 ~~~~~~~~~~~lrp~~i~g~~~~------------~~-~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~  278 (296)
                      .+++.--+.+|+||..|||....            +. .....++.....++++-|+|.+|+.++.+|++.|++|++.+ 
T Consensus       198 aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vG-  276 (391)
T KOG2865|consen  198 AVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVG-  276 (391)
T ss_pred             HHHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecC-
Confidence            99988889999999999996421            11 12334455566789999999999999999999999999999 


Q ss_pred             CCCCCCCHHHHHHHhhc
Q 022495          279 VDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       279 ~~~~~~~~~el~~~i~~  295 (296)
                        +..+++.|+++.+-+
T Consensus       277 --P~~yql~eLvd~my~  291 (391)
T KOG2865|consen  277 --PDRYQLSELVDIMYD  291 (391)
T ss_pred             --CchhhHHHHHHHHHH
Confidence              799999999998753

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.91  E-value=2.7e-23  Score=180.43  Aligned_cols=223  Identities=17%  Similarity=0.198  Sum_probs=156.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcch--hhhccc-CCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDK--AKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ++.+++||||+||+|+++++.|++++  .+|++++..+..  ...... .....++++++|+.| ...+.+++.+ + .|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~-~~~i~~a~~~-~-~V   79 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLD-ANSISNAFQG-A-VV   79 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhh-hhhhhhhccC-c-eE
Confidence            46799999999999999999999998  789999888742  111111 125789999999999 8999999999 8 78


Q ss_pred             EEcCCCCCCC-CC-----cchhHH---HHHHHHHHHcCCCEEEEEccceeccCccC-ccCChhh-hhhhhhHHHHHHHHH
Q 022495          140 VCATGFQPGW-DL-----FAPWKA---INLVEACRKRGVNRFILISSILVNGAAMG-QILNPAY-IFLNVFGLTLIAKLQ  208 (296)
Q Consensus       140 v~~ag~~~~~-~~-----~~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~-~~~~~~~-~~~~~~~~y~~sK~~  208 (296)
                      +|||+..... ..     ....++   ++++++|++.+++++||+||.+|...... ...++.. .|.+....|+.||+.
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~  159 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKAL  159 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHH
Confidence            8877643221 11     111111   99999999999999999999998655443 1112211 124445689999999


Q ss_pred             HHHHHHHh----CCcEEEEecCcccCCCCCCce------------ee-cccCccccCCcCHHHHHHHHHHHh-----cCC
Q 022495          209 AEQYIRKS----GINYTIIRPGGLRNEPPTGNI------------IM-ETEDTLYEGTISRDQVAEVAVEAL-----LHP  266 (296)
Q Consensus       209 ~e~~~~~~----~~~~~~lrp~~i~g~~~~~~~------------~~-~~~~~~~~~~i~~~Dva~~i~~~l-----~~~  266 (296)
                      +|+++.+.    ++..++|||..|||+......            .+ ......+..+++.+.++.+.+.+.     ..+
T Consensus       160 aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~  239 (361)
T KOG1430|consen  160 AEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSP  239 (361)
T ss_pred             HHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCC
Confidence            99998753    378999999999998654321            11 122234456777777766655433     345


Q ss_pred             CCCCCeEEEEeCCCCCCCCHHHHHHHh
Q 022495          267 ESSYKVVEIISRVDAPKRSYEDLFGSI  293 (296)
Q Consensus       267 ~~~~~~~~i~~~~~~~~~~~~el~~~i  293 (296)
                      ...|+.|.|.+   ++++..-+++..+
T Consensus       240 ~~~Gq~yfI~d---~~p~~~~~~~~~l  263 (361)
T KOG1430|consen  240 SVNGQFYFITD---DTPVRFFDFLSPL  263 (361)
T ss_pred             ccCceEEEEeC---CCcchhhHHHHHH
Confidence            67899999999   4665444443343

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-23  Score=179.91  Aligned_cols=212  Identities=23%  Similarity=0.259  Sum_probs=145.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~v  139 (296)
                      .|++|||||+||||++++++|+++|++|+++.|+++....+......++.++.+|++| .+++.+++.+      ++|+|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999999999999999876654433233578999999999 7777765532      38999


Q ss_pred             EEcCCCCCCCCCc----chh------HH---HHHHHH----HHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          140 VCATGFQPGWDLF----APW------KA---INLVEA----CRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       140 v~~ag~~~~~~~~----~~~------~~---~~~l~~----~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |||||........    ..+      +.   .+++++    +++.+.++||++||......            ..+.+.|
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~~~~Y  148 (276)
T PRK06482         81 VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA------------YPGFSLY  148 (276)
T ss_pred             EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC------------CCCCchh
Confidence            9999965322111    000      11   444444    57777789999999754321            1135679


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-----eeccc-----------CccccCCcCHHHHHHHH
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----IMETE-----------DTLYEGTISRDQVAEVA  259 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-----~~~~~-----------~~~~~~~i~~~Dva~~i  259 (296)
                      +.+|++.|.+++       .++++++++|||.+.++...+..     .....           .....-+.+++|+++++
T Consensus       149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~  228 (276)
T PRK06482        149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAM  228 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHH
Confidence            999999997764       25899999999988544321110     00000           00011136899999999


Q ss_pred             HHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhh
Q 022495          260 VEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIK  294 (296)
Q Consensus       260 ~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~  294 (296)
                      +.++..+.. +..|++++   +...++.|+++.+.
T Consensus       229 ~~~~~~~~~-~~~~~~g~---~~~~~~~~~~~~~~  259 (276)
T PRK06482        229 IASADQTPA-PRRLTLGS---DAYASIRAALSERL  259 (276)
T ss_pred             HHHHcCCCC-CeEEecCh---HHHHHHHHHHHHHH
Confidence            999986543 45688887   56677777766554

>PLN02778 3,5-epimerase/4-reductase

Probab=99.91  E-value=5.7e-23  Score=178.76  Aligned_cols=201  Identities=14%  Similarity=0.138  Sum_probs=139.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag  144 (296)
                      .|+||||||+||||++|++.|+++|++|++..                     .|+.| .+.+...+.. ++|+|||+||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------~~~~~-~~~v~~~l~~~~~D~ViH~Aa   66 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------GRLEN-RASLEADIDAVKPTHVFNAAG   66 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------CccCC-HHHHHHHHHhcCCCEEEECCc
Confidence            47899999999999999999999999987421                     34555 5556665653 4999999999


Q ss_pred             CCCCCC----Ccch---hH--H---HHHHHHHHHcCCCEEEEEccceeccCcc------CccCChhhhhhhhhHHHHHHH
Q 022495          145 FQPGWD----LFAP---WK--A---INLVEACRKRGVNRFILISSILVNGAAM------GQILNPAYIFLNVFGLTLIAK  206 (296)
Q Consensus       145 ~~~~~~----~~~~---~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~------~~~~~~~~~~~~~~~~y~~sK  206 (296)
                      ......    ....   ..  .   .+++++|++.+++ ++++||..+|+...      +....++..+..+.+.|+.+|
T Consensus        67 ~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK  145 (298)
T PLN02778         67 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTK  145 (298)
T ss_pred             ccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHH
Confidence            753211    0111   11  1   8999999999985 56667777775422      112344444444557899999


Q ss_pred             HHHHHHHHHhCCcEEEEecCcccCCCCCC--cee---ecccC--ccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCC
Q 022495          207 LQAEQYIRKSGINYTIIRPGGLRNEPPTG--NII---METED--TLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRV  279 (296)
Q Consensus       207 ~~~e~~~~~~~~~~~~lrp~~i~g~~~~~--~~~---~~~~~--~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~  279 (296)
                      .++|.+++.+. +..++|++..++.....  .++   .....  .....+++++|++++++.++.... . .+||+++  
T Consensus       146 ~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~-~-g~yNigs--  220 (298)
T PLN02778        146 AMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNL-T-GIYNFTN--  220 (298)
T ss_pred             HHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCC-C-CeEEeCC--
Confidence            99999997764 67788888767643211  111   01111  112358999999999999887543 3 4999988  


Q ss_pred             CCCCCCHHHHHHHhhc
Q 022495          280 DAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       280 ~~~~~~~~el~~~i~~  295 (296)
                       +..+++.|+++.+.+
T Consensus       221 -~~~iS~~el~~~i~~  235 (298)
T PLN02778        221 -PGVVSHNEILEMYRD  235 (298)
T ss_pred             -CCcccHHHHHHHHHH
Confidence             688999999998765

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-22  Score=174.68  Aligned_cols=217  Identities=20%  Similarity=0.248  Sum_probs=149.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-----CCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++.......     ...++.++.+|++| .+.+.+.++.   
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~   82 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATA   82 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999987654432210     12468889999999 7777766542   


Q ss_pred             ---CCCEEEEcCCCCCC---CCCcc--hh-H-----H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 ---DSEAVVCATGFQPG---WDLFA--PW-K-----A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~---~~~~~--~~-~-----~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                         ++|+||||||....   .....  .+ .     .       +.+++.+.+.+.++||++||...+...         
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  153 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH---------  153 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC---------
Confidence               38999999985421   11111  11 0     0       444555555556799999998764321         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~  260 (296)
                         .+.+.|+.+|++.|.+++.       .++++++|+||.+.++.........      ........+.+++|+|++++
T Consensus       154 ---~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  230 (276)
T PRK05875        154 ---RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAM  230 (276)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHH
Confidence               1246799999999988753       4799999999999876532211000      00111233578999999999


Q ss_pred             HHhcCCCC--CCCeEEEEeCCCCCCC----CHHHHHHHhhc
Q 022495          261 EALLHPES--SYKVVEIISRVDAPKR----SYEDLFGSIKQ  295 (296)
Q Consensus       261 ~~l~~~~~--~~~~~~i~~~~~~~~~----~~~el~~~i~~  295 (296)
                      .++..+..  .+.++++.+   +..+    ++.|+++.+.+
T Consensus       231 ~l~~~~~~~~~g~~~~~~~---g~~~~~~~~~~~~~~~~~~  268 (276)
T PRK05875        231 FLLSDAASWITGQVINVDG---GHMLRRGPDFSSMLEPVFG  268 (276)
T ss_pred             HHcCchhcCcCCCEEEECC---CeeccCCccHHHHHHHHhh
Confidence            99887543  367888876   4554    78888877653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=8.6e-23  Score=174.03  Aligned_cols=201  Identities=17%  Similarity=0.135  Sum_probs=142.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++++++||||+|+||++++++|+++|++|++++|++++..+...   ....++.++.+|++| .+.+.++++.      
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999999876543321   124578899999999 7877766652      


Q ss_pred             CCCEEEEcCCCCCCCCC----cchhH-------------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPWK-------------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~~-------------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||.......    .....             .+.+++++++.+.++||++||...+...            .
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~  148 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS------------A  148 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC------------C
Confidence            38999999986432111    01000             1778888888888899999998654322            1


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-------ec---------ccCccccCCcCHHH
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------ME---------TEDTLYEGTISRDQ  254 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-------~~---------~~~~~~~~~i~~~D  254 (296)
                      +.+.|+.+|.+.+.+.+       ..++++++++||.++++...+...       ..         ........+++++|
T Consensus       149 ~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (258)
T PRK12429        149 GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE  228 (258)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHH
Confidence            24568888888886654       258999999999999865322110       00         00111235899999


Q ss_pred             HHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          255 VAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       255 va~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|++++.++....  ..++.|++.+
T Consensus       229 ~a~~~~~l~~~~~~~~~g~~~~~~~  253 (258)
T PRK12429        229 IADYALFLASFAAKGVTGQAWVVDG  253 (258)
T ss_pred             HHHHHHHHcCccccCccCCeEEeCC
Confidence            9999998887643  3467777765

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.2e-22  Score=174.72  Aligned_cols=186  Identities=17%  Similarity=0.155  Sum_probs=135.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++++++||||+|+||+++++.|+++|++|++.+|++++..+... ....+.++.+|++| .+++.++++.      ++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAA-ELGLVVGGPLDVTD-PASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HhccceEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            3567899999999999999999999999999999999877654332 11258889999999 7776554432      48


Q ss_pred             CEEEEcCCCCCCCCCcc----hh------HH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLFA----PW------KA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~----~~------~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||.........    .+      +.       +.+++.+++.+.++||++||...+...            ...
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~  147 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV------------PGM  147 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC------------CCC
Confidence            99999999754221111    00      00       667788888888899999998754322            124


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ..|+.+|++.+.+.+       +.|+++++|+||++.++...+..     ......+++++|+|+.++.++.++.
T Consensus       148 ~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        148 ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTG-----GAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccc-----cccCCCCCCHHHHHHHHHHHHhCCC
Confidence            569999998876543       46899999999999876533221     1112357899999999999998764

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.3e-22  Score=175.06  Aligned_cols=191  Identities=17%  Similarity=0.182  Sum_probs=134.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      ++|+++||||+|+||++++++|+++|++|++++|++++...+......++.++.+|++| .+++.+++++      ++|+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCCE
Confidence            36789999999999999999999999999999999877655443233568899999999 7877766652      3899


Q ss_pred             EEEcCCCCCCCCCc----chh------HH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWDLF----APW------KA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~~~----~~~------~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ||||||........    ..+      +.       +.+++.+++.+.++||++||...+...            .+...
T Consensus        82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~------------~~~~~  149 (277)
T PRK06180         82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM------------PGIGY  149 (277)
T ss_pred             EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC------------CCcch
Confidence            99999974321111    110      11       445555666677899999998754322            13467


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-----ecc------------cCccccCCcCHHHHHH
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----MET------------EDTLYEGTISRDQVAE  257 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-----~~~------------~~~~~~~~i~~~Dva~  257 (296)
                      |+.+|++++.+++       .+|+++++++||.+.++.......     ...            .......+.+++|+|+
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  229 (277)
T PRK06180        150 YCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQ  229 (277)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHH
Confidence            9999999987664       258999999999998764221110     000            0001123578999999


Q ss_pred             HHHHHhcCCCC
Q 022495          258 VAVEALLHPES  268 (296)
Q Consensus       258 ~i~~~l~~~~~  268 (296)
                      +++.++..+..
T Consensus       230 ~~~~~l~~~~~  240 (277)
T PRK06180        230 AILAAVESDEP  240 (277)
T ss_pred             HHHHHHcCCCC
Confidence            99999987643

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-22  Score=173.18  Aligned_cols=202  Identities=21%  Similarity=0.199  Sum_probs=140.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|++|||||+|+||+++++.|+++|++|++++|++++..+..   .....++.++++|++| .+.+.+++.+     
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   82 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERF   82 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999999999986544322   1123467889999999 7877765542     


Q ss_pred             -CCCEEEEcCCCCCCCC----CcchhH-------------HHHHHHHH-HHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWD----LFAPWK-------------AINLVEAC-RKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~----~~~~~~-------------~~~~l~~~-~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||......    ....+.             .+++++.+ ++.+.++||++||...+...           
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~-----------  151 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS-----------  151 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC-----------
Confidence             3899999999643211    111111             16778888 66678899999997644221           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---ec-------------ccCccccCCcCH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---ME-------------TEDTLYEGTISR  252 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~~-------------~~~~~~~~~i~~  252 (296)
                       .+...|+.+|.+.+.+++       ..++++++|+||.++++.....+.   ..             ........++++
T Consensus       152 -~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (262)
T PRK13394        152 -PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTV  230 (262)
T ss_pred             -CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCH
Confidence             123568899998887664       258999999999999874321110   00             001112458999


Q ss_pred             HHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          253 DQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|++++++.++..+.  ..+..+++.+
T Consensus       231 ~dva~a~~~l~~~~~~~~~g~~~~~~~  257 (262)
T PRK13394        231 EDVAQTVLFLSSFPSAALTGQSFVVSH  257 (262)
T ss_pred             HHHHHHHHHHcCccccCCcCCEEeeCC
Confidence            999999999887543  2356666655

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=3.3e-22  Score=169.27  Aligned_cols=201  Identities=20%  Similarity=0.203  Sum_probs=140.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh----cccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++|+||||||+|+||++++++|+++|++|+++.|......+    .......++.++.+|+.| .+++.+++.+     
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   82 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999887777543221    111134578999999999 7877766642     


Q ss_pred             -CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+|||+||......    ....+..             +.+++.+++.+.++||++||...+...            
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~------------  150 (249)
T PRK12825         83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW------------  150 (249)
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC------------
Confidence             3899999999543221    1111110             445555577778899999998765332            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc--c--CccccCCcCHHHHHHHHHHHhcC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET--E--DTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~--~--~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .....|+.+|.+.+.+++       +.+++++++|||.++++..........  .  ......+++++|+++++..++.+
T Consensus       151 ~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~  230 (249)
T PRK12825        151 PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSD  230 (249)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCc
Confidence            124568999998886653       358999999999999976433211100  0  11123478999999999999966


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      +.  ..++++++.+
T Consensus       231 ~~~~~~g~~~~i~~  244 (249)
T PRK12825        231 ASDYITGQVIEVTG  244 (249)
T ss_pred             cccCcCCCEEEeCC
Confidence            43  4578888876

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.90  E-value=1.7e-22  Score=166.06  Aligned_cols=211  Identities=16%  Similarity=0.177  Sum_probs=150.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc-CCCCEEEEcCCCC-
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-DDSEAVVCATGFQ-  146 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~~~d~vv~~ag~~-  146 (296)
                      |+||||||+||++|+..|.+.|++|++++|++.+....+.   ..+..        .+.+.+... + +|+|||.||.. 
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~---~~v~~--------~~~~~~~~~~~-~DavINLAG~~I   68 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH---PNVTL--------WEGLADALTLG-IDAVINLAGEPI   68 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC---ccccc--------cchhhhcccCC-CCEEEECCCCcc
Confidence            6899999999999999999999999999999987654332   12221        122333333 5 99999999953 


Q ss_pred             --CCCCCcchhHH--------HHHHHHHHH--cCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHH-
Q 022495          147 --PGWDLFAPWKA--------INLVEACRK--RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI-  213 (296)
Q Consensus       147 --~~~~~~~~~~~--------~~~l~~~~~--~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-  213 (296)
                        ..|.......+        +.+.++..+  .+.+.+|.-|.++.||......++|+..+.+.+..--+..|+-|..- 
T Consensus        69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a  148 (297)
T COG1090          69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQA  148 (297)
T ss_pred             ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhh
Confidence              22443333322        666776663  34667888888888999988887777555555554444444444333 


Q ss_pred             HHhCCcEEEEecCcccCCCCCC--ceee---------cccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCC
Q 022495          214 RKSGINYTIIRPGGLRNEPPTG--NIIM---------ETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAP  282 (296)
Q Consensus       214 ~~~~~~~~~lrp~~i~g~~~~~--~~~~---------~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~  282 (296)
                      ++.|.|++++|.|.|.++...-  .+..         -+....|.+|||++|++++|..++++....| .||++.   |.
T Consensus       149 ~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsG-p~N~ta---P~  224 (297)
T COG1090         149 QQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSG-PFNLTA---PN  224 (297)
T ss_pred             hhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCC-cccccC---CC
Confidence            2459999999999999864321  1111         1233455679999999999999999988766 899999   79


Q ss_pred             CCCHHHHHHHhhc
Q 022495          283 KRSYEDLFGSIKQ  295 (296)
Q Consensus       283 ~~~~~el~~~i~~  295 (296)
                      +++..|+.+.+.+
T Consensus       225 PV~~~~F~~al~r  237 (297)
T COG1090         225 PVRNKEFAHALGR  237 (297)
T ss_pred             cCcHHHHHHHHHH
Confidence            9999999998864

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=3.5e-22  Score=169.62  Aligned_cols=201  Identities=16%  Similarity=0.109  Sum_probs=140.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ++++++++||||+|+||++++++|+++|++|++++|++++..+....  ...++.++.+|+.| .+.+.+++.+      
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFG   80 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            35678999999999999999999999999999999998765543221  13458899999999 8888766642      


Q ss_pred             CCCEEEEcCCCCCCCCC-----cchhH-------------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL-----FAPWK-------------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~-----~~~~~-------------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      ++|+|||++|.......     ...+.             .+.+++.+++.+.++||++||...+...            
T Consensus        81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  148 (251)
T PRK07231         81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR------------  148 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC------------
Confidence            38999999996432211     01110             0666677777777899999998765432            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee---c-----ccCccccCCcCHHHHHHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---E-----TEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~---~-----~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      .+...|+.+|.+.+.+++       ..+++++.++||.+.++........   .     ........+++++|+|++++.
T Consensus       149 ~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  228 (251)
T PRK07231        149 PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALF  228 (251)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            224568999998887664       2489999999999987643321110   0     000112346899999999999


Q ss_pred             HhcCCC--CCCCeEEEE
Q 022495          262 ALLHPE--SSYKVVEII  276 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~  276 (296)
                      ++..+.  ..+..+.+.
T Consensus       229 l~~~~~~~~~g~~~~~~  245 (251)
T PRK07231        229 LASDEASWITGVTLVVD  245 (251)
T ss_pred             HhCccccCCCCCeEEEC
Confidence            887543  234555553

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.90  E-value=8.5e-23  Score=171.75  Aligned_cols=207  Identities=27%  Similarity=0.355  Sum_probs=147.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh-hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCCC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK-TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQP  147 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~  147 (296)
                      |+|+||||.+|+++++.|++.|++|+++.|++.+.. ..+  ...+++++.+|+.| .+++.++|++ +|+||++.+...
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l--~~~g~~vv~~d~~~-~~~l~~al~g-~d~v~~~~~~~~   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQL--QALGAEVVEADYDD-PESLVAALKG-VDAVFSVTPPSH   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHH--HHTTTEEEES-TT--HHHHHHHHTT-CSEEEEESSCSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhh--hcccceEeecccCC-HHHHHHHHcC-CceEEeecCcch
Confidence            799999999999999999999999999999985422 122  22578899999999 9999999999 999999887543


Q ss_pred             CCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEecCc
Q 022495          148 GWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG  227 (296)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp~~  227 (296)
                         ........++++++++.|+++||+.|....+....+         ..|.......|...|+++++.+++|++||||.
T Consensus        77 ---~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~---------~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~  144 (233)
T PF05368_consen   77 ---PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSG---------SEPEIPHFDQKAEIEEYLRESGIPYTIIRPGF  144 (233)
T ss_dssp             ---CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTT---------STTHHHHHHHHHHHHHHHHHCTSEBEEEEE-E
T ss_pred             ---hhhhhhhhhHHHhhhccccceEEEEEeccccccccc---------ccccchhhhhhhhhhhhhhhccccceeccccc
Confidence               122233389999999999999997554433211100         11122234679999999999999999999997


Q ss_pred             ccCCCC----------CC--ceeecccCccccCC-cCHHHHHHHHHHHhcCCCCC--CCeEEEEeCCCCCCCCHHHHHHH
Q 022495          228 LRNEPP----------TG--NIIMETEDTLYEGT-ISRDQVAEVAVEALLHPESS--YKVVEIISRVDAPKRSYEDLFGS  292 (296)
Q Consensus       228 i~g~~~----------~~--~~~~~~~~~~~~~~-i~~~Dva~~i~~~l~~~~~~--~~~~~i~~~~~~~~~~~~el~~~  292 (296)
                      ++....          ..  .+.+.........+ ++.+|+|++++.++.+|...  ++.+.+.+    +.+|+.|+++.
T Consensus       145 f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~----~~~t~~eia~~  220 (233)
T PF05368_consen  145 FMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG----ETLTYNEIAAI  220 (233)
T ss_dssp             EHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG----GEEEHHHHHHH
T ss_pred             hhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC----CCCCHHHHHHH
Confidence            765311          11  12222222222234 59999999999999998765  45555543    77999999999


Q ss_pred             hhc
Q 022495          293 IKQ  295 (296)
Q Consensus       293 i~~  295 (296)
                      +++
T Consensus       221 ~s~  223 (233)
T PF05368_consen  221 LSK  223 (233)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4e-22  Score=172.17  Aligned_cols=198  Identities=20%  Similarity=0.198  Sum_probs=137.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc-----CCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++++||||+|+||+++++.|+++|++|++++|+++...+...     ..+.++.++.+|++| .+++.+ +..     
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence            46899999999999999999999999999999998765543221     113468999999999 776654 321     


Q ss_pred             -CCCEEEEcCCCCCCCCCc----chh------HH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF----APW------KA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~----~~~------~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||........    ..+      +.       +.+++.+++.+.++||++||...+...            
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------  147 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF------------  147 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC------------
Confidence             389999999865432111    110      01       555566777777899999997543221            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---eccc----------------CccccCCc
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---METE----------------DTLYEGTI  250 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~~~~----------------~~~~~~~i  250 (296)
                      .+.+.|+.+|.+.+.+++       +.++++++++||.++++.......   ....                ......++
T Consensus       148 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (280)
T PRK06914        148 PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFG  227 (280)
T ss_pred             CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccC
Confidence            124568999999987764       358999999999998874221110   0000                00112468


Q ss_pred             CHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          251 SRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       251 ~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      +++|+|++++.++.++... ..|++++
T Consensus       228 ~~~dva~~~~~~~~~~~~~-~~~~~~~  253 (280)
T PRK06914        228 NPIDVANLIVEIAESKRPK-LRYPIGK  253 (280)
T ss_pred             CHHHHHHHHHHHHcCCCCC-cccccCC
Confidence            9999999999999887643 4566654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=2.1e-22  Score=171.56  Aligned_cols=202  Identities=17%  Similarity=0.147  Sum_probs=139.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++..+..   ...+.++.++.+|++| .+.+.+++.+     
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   85 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999999976554322   1123458889999999 7877776643     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||.......    ...+.    .         +.+++.+++.+.++||++||...+..            .
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------------~  153 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA------------R  153 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC------------C
Confidence             49999999996432111    11111    0         45555666666789999999754321            1


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHHHHh
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      ..+..|+.+|.+.+.+++       ++|+++++|+||.+.++.........      ........+..++|+|++++.++
T Consensus       154 ~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  233 (255)
T PRK07523        154 PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLA  233 (255)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            235669999999987764       46899999999999987532111000      00111234678999999998888


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..+.++++.+
T Consensus       234 ~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        234 SDASSFVNGHVLYVDG  249 (255)
T ss_pred             CchhcCccCcEEEECC
Confidence            6533  2456666654

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.2e-21  Score=167.14  Aligned_cols=213  Identities=19%  Similarity=0.227  Sum_probs=149.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-CCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      +++++||||+|+||+++++.|+++|++|++++|++++....... ...++.++++|+.| .+.+.+++.+      ++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999988765433221 23468899999999 8877766643      3899


Q ss_pred             EEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ||||+|........    ..+.    .         +.+++.+++.+.++||++||...+... +            ...
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~------------~~~  147 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-G------------HPA  147 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-C------------Ccc
Confidence            99999864322111    1111    0         445566666777899999997543211 1            235


Q ss_pred             HHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee----e-cc--cCccccCCcCHHHHHHHHHHHhcCC-
Q 022495          202 TLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII----M-ET--EDTLYEGTISRDQVAEVAVEALLHP-  266 (296)
Q Consensus       202 y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~----~-~~--~~~~~~~~i~~~Dva~~i~~~l~~~-  266 (296)
                      |+.+|++.+.+++.       .++++++++||.++++.......    + ..  .......+++++|++++++.++... 
T Consensus       148 y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  227 (257)
T PRK07074        148 YSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAA  227 (257)
T ss_pred             cHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchh
Confidence            88999998877642       47999999999998875322110    0 00  0111245799999999999998643 


Q ss_pred             -CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          267 -ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       267 -~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                       ...+..+++.+   +......|+++.+.+
T Consensus       228 ~~~~g~~~~~~~---g~~~~~~~~~~~~~~  254 (257)
T PRK07074        228 RAITGVCLPVDG---GLTAGNREMARTLTL  254 (257)
T ss_pred             cCcCCcEEEeCC---CcCcCChhhhhhhcc
Confidence             23455666654   788899999998764

>PRK06182 short chain dehydrogenase; Validated

Probab=99.89  E-value=8.3e-22  Score=169.62  Aligned_cols=186  Identities=20%  Similarity=0.245  Sum_probs=134.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      ++|+++||||+|+||++++++|+++|++|++++|++++..+...   .+++++.+|++| .+.+.++++.      ++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---LGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---CCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCE
Confidence            46899999999999999999999999999999999877655432   358899999999 8887776651      3999


Q ss_pred             EEEcCCCCCCCCCc----chh------H-------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWDLF----APW------K-------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~~~----~~~------~-------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ||||||........    ..+      +       .+.+++.+++.+.++||++||...+...            .....
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~------------~~~~~  145 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT------------PLGAW  145 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC------------CCccH
Confidence            99999975322110    000      0       1777888888888899999997542211            11345


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC---ceeecc-cC----------------ccccCCcCHHH
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG---NIIMET-ED----------------TLYEGTISRDQ  254 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~---~~~~~~-~~----------------~~~~~~i~~~D  254 (296)
                      |+.+|++.+.+.+       ..++++++++||.+.++....   .+.... ..                .....+.+++|
T Consensus       146 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (273)
T PRK06182        146 YHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSV  225 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence            9999999998653       358999999999999875311   000000 00                00123578999


Q ss_pred             HHHHHHHHhcCC
Q 022495          255 VAEVAVEALLHP  266 (296)
Q Consensus       255 va~~i~~~l~~~  266 (296)
                      +|++++.++...
T Consensus       226 vA~~i~~~~~~~  237 (273)
T PRK06182        226 IADAISKAVTAR  237 (273)
T ss_pred             HHHHHHHHHhCC
Confidence            999999999864

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.89  E-value=7.3e-22  Score=177.16  Aligned_cols=212  Identities=19%  Similarity=0.195  Sum_probs=161.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhc---ccC--CCCCeEEEEcccCCChHHHHHHhcC-C
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTT---LSK--DNPSLQIVKADVTEGSAKLSEAIGD-D  135 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~---~~~--~~~~~~~~~~D~~d~~~~~~~~~~~-~  135 (296)
                      .+++|+||||||+|-||+.+++++++.+ .++++++|++.+.-..   +..  ...++.++-+|++| .+.+.+++.+ +
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD-~~~~~~~~~~~k  325 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD-RDRVERAMEGHK  325 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc-HHHHHHHHhcCC
Confidence            4689999999999999999999999988 5788889988654322   111  24678999999999 9999999998 8


Q ss_pred             CCEEEEcCCCCCCC----CCcchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHH
Q 022495          136 SEAVVCATGFQPGW----DLFAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK  206 (296)
Q Consensus       136 ~d~vv~~ag~~~~~----~~~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK  206 (296)
                      +|+|+|.|+..+-.    ++.+...  +   +|++++|.+.|+++||++||--               ..+|.+.||+||
T Consensus       326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK---------------AV~PtNvmGaTK  390 (588)
T COG1086         326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK---------------AVNPTNVMGATK  390 (588)
T ss_pred             CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc---------------ccCCchHhhHHH
Confidence            99999999875422    2222111  1   9999999999999999999953               256678899999


Q ss_pred             HHHHHHHHHh-------CCcEEEEecCcccCCCCCCce-----------eecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          207 LQAEQYIRKS-------GINYTIIRPGGLRNEPPTGNI-----------IMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       207 ~~~e~~~~~~-------~~~~~~lrp~~i~g~~~~~~~-----------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      ..+|.++...       +.++..+|.|++.|...+--.           +.-.......-|++.+|.++.++++..... 
T Consensus       391 r~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~-  469 (588)
T COG1086         391 RLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAK-  469 (588)
T ss_pred             HHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcC-
Confidence            9999987532       378999999999996532111           111112222347889999999999988743 


Q ss_pred             CCCeEEEEeCCCCCCCCHHHHHHHhh
Q 022495          269 SYKVVEIISRVDAPKRSYEDLFGSIK  294 (296)
Q Consensus       269 ~~~~~~i~~~~~~~~~~~~el~~~i~  294 (296)
                      .|.+|-+--   |+++++.|+++.+-
T Consensus       470 gGeifvldM---GepvkI~dLAk~mi  492 (588)
T COG1086         470 GGEIFVLDM---GEPVKIIDLAKAMI  492 (588)
T ss_pred             CCcEEEEcC---CCCeEHHHHHHHHH
Confidence            455665544   89999999999873

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.7e-22  Score=165.79  Aligned_cols=198  Identities=19%  Similarity=0.193  Sum_probs=138.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-CCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      .+++|++|||||+|+||+++++.|+++|++|++++|++.+..+.... ....++++.+|++| .+++.+++++      +
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence            45689999999999999999999999999999999987654332211 12457888999999 7777666542      3


Q ss_pred             CCEEEEcCCCCCCCC---C-cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWD---L-FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~---~-~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+|||++|......   . ...+.    .         +.+++.+++.+.++||++||...++...            +
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~  150 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP------------G  150 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC------------C
Confidence            999999998643211   0 01000    0         4445555667788999999998765321            2


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC--CC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE--SS  269 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~  269 (296)
                      ...|+.+|.+.+.+++       +.++++++++||+++++......    .......+++++|+|++++.++.+..  ..
T Consensus       151 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~----~~~~~~~~~~~~dva~~~~~~l~~~~~~~~  226 (239)
T PRK12828        151 MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM----PDADFSRWVTPEQIAAVIAFLLSDEAQAIT  226 (239)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC----CchhhhcCCCHHHHHHHHHHHhCccccccc
Confidence            4568899998876664       35899999999999987422211    11122347999999999998887643  34


Q ss_pred             CCeEEEEe
Q 022495          270 YKVVEIIS  277 (296)
Q Consensus       270 ~~~~~i~~  277 (296)
                      ++.+.+.+
T Consensus       227 g~~~~~~g  234 (239)
T PRK12828        227 GASIPVDG  234 (239)
T ss_pred             ceEEEecC
Confidence            56666655

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.89  E-value=7.1e-22  Score=184.00  Aligned_cols=230  Identities=18%  Similarity=0.245  Sum_probs=156.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC---eEEEEEcCcchhh-------hccc-----------C------CCCCeEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAK-------TTLS-----------K------DNPSLQI  116 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-------~~~~-----------~------~~~~~~~  116 (296)
                      +++|+|||||||||||.+|++.|++.+.   +|+++.|......       +++.           .      ...++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4689999999999999999999998753   6899999753211       1110           0      1347899


Q ss_pred             EEcccCCC-----hHHHHHHhcCCCCEEEEcCCCCCCCCCcc---hhHH---HHHHHHHHHcC-CCEEEEEccceeccCc
Q 022495          117 VKADVTEG-----SAKLSEAIGDDSEAVVCATGFQPGWDLFA---PWKA---INLVEACRKRG-VNRFILISSILVNGAA  184 (296)
Q Consensus       117 ~~~D~~d~-----~~~~~~~~~~~~d~vv~~ag~~~~~~~~~---~~~~---~~~l~~~~~~~-~~~iV~~SS~~~~~~~  184 (296)
                      +.+|++++     .+....+..+ +|+|||+|+.........   ..++   .+++++|++.+ .++|||+||.++||..
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~-vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~  275 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKE-VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQR  275 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhc-CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCC
Confidence            99999993     1345556677 999999998654322211   1112   99999998874 7899999999999876


Q ss_pred             cCccCChhhh---------------------------------------------------------hhhhhHHHHHHHH
Q 022495          185 MGQILNPAYI---------------------------------------------------------FLNVFGLTLIAKL  207 (296)
Q Consensus       185 ~~~~~~~~~~---------------------------------------------------------~~~~~~~y~~sK~  207 (296)
                      .+...+..+.                                                         .....+.|..||+
T Consensus       276 ~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~  355 (605)
T PLN02503        276 QGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKA  355 (605)
T ss_pred             CCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHH
Confidence            5332111110                                                         0111267999999


Q ss_pred             HHHHHHHHh--CCcEEEEecCcccC----------CCC--CCce-e---------ecccCccccCCcCHHHHHHHHHHHh
Q 022495          208 QAEQYIRKS--GINYTIIRPGGLRN----------EPP--TGNI-I---------METEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       208 ~~e~~~~~~--~~~~~~lrp~~i~g----------~~~--~~~~-~---------~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      .+|+++++.  +++++|+||+.|.+          +..  .+.. .         +..........|++|.++.+++.+.
T Consensus       356 lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~  435 (605)
T PLN02503        356 MGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAM  435 (605)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHH
Confidence            999999764  79999999998833          210  0110 0         1112233345789999999988884


Q ss_pred             cC-C---CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          264 LH-P---ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       264 ~~-~---~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .. .   ...+.+||+++. ..++++|.|+++.+.+
T Consensus       436 a~~~~~~~~~~~vYn~ts~-~~nP~t~~~~~~~~~~  470 (605)
T PLN02503        436 AKHGGAAKPEINVYQIASS-VVNPLVFQDLARLLYE  470 (605)
T ss_pred             HhhhcccCCCCCEEEeCCC-CCCCeEHHHHHHHHHH
Confidence            31 1   124679999872 2389999999998764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=7.5e-22  Score=167.57  Aligned_cols=200  Identities=17%  Similarity=0.185  Sum_probs=137.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .+++++||||+|+||+++++.|+++|++|+++ .|+..+..+.   ......++.++.+|++| .+++.+++++      
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999998764 6776544322   11234568899999999 7877766653      


Q ss_pred             CCCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||.......    ...+.    .         +.+++.+++.+.++||++||+..+..            ..
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~  149 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY------------LE  149 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC------------CC
Confidence            48999999986432111    00000    1         55666666667789999999865421            12


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc-----eeec-ccCccccCCcCHHHHHHHHHHHhc
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN-----IIME-TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~-----~~~~-~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      +...|+.+|++.+.+++       +.++++++|+||.+.++.....     +... ........+++++|+|++++.++.
T Consensus       150 ~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~  229 (250)
T PRK08063        150 NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCS  229 (250)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcC
Confidence            24579999999998775       3689999999999987642210     0000 001112347999999999999887


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      ++.  ..++.+++.+
T Consensus       230 ~~~~~~~g~~~~~~g  244 (250)
T PRK08063        230 PEADMIRGQTIIVDG  244 (250)
T ss_pred             chhcCccCCEEEECC
Confidence            653  2466666654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.89  E-value=1.3e-22  Score=171.45  Aligned_cols=207  Identities=20%  Similarity=0.257  Sum_probs=136.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccC-----CCCCeE----EEEcccCCChHHHHHHhcC-CCC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSK-----DNPSLQ----IVKADVTEGSAKLSEAIGD-DSE  137 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-----~~~~~~----~~~~D~~d~~~~~~~~~~~-~~d  137 (296)
                      ||||||+|.||+.|+++|++.+ .++++++|++.++-.+...     ...++.    .+.+|++| .+.+.++|+. ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd-~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD-KERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH-HHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC-HHHHHHHHhhcCCC
Confidence            7999999999999999999998 6799999998765433221     223454    45899999 9999999984 499


Q ss_pred             EEEEcCCCCCC----CCCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHH
Q 022495          138 AVVCATGFQPG----WDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQ  208 (296)
Q Consensus       138 ~vv~~ag~~~~----~~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~  208 (296)
                      +|||.|+..+-    ..+.+....     +|++++|.+.++++||++||--+               .+|.+.||+||..
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA---------------v~PtnvmGatKrl  144 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA---------------VNPTNVMGATKRL  144 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC---------------SS--SHHHHHHHH
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc---------------CCCCcHHHHHHHH
Confidence            99999987542    222222211     99999999999999999999632               4567889999999


Q ss_pred             HHHHHHHh-------CCcEEEEecCcccCCCCCC-----------ceeecccCccccCCcCHHHHHHHHHHHhcCCCCCC
Q 022495          209 AEQYIRKS-------GINYTIIRPGGLRNEPPTG-----------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSY  270 (296)
Q Consensus       209 ~e~~~~~~-------~~~~~~lrp~~i~g~~~~~-----------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~  270 (296)
                      +|.++...       +.++.++|.|+|.|...+-           ..+.-.......-++++++.++.++.+..... .+
T Consensus       145 aE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~-~g  223 (293)
T PF02719_consen  145 AEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAK-GG  223 (293)
T ss_dssp             HHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---TT
T ss_pred             HHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCC-CC
Confidence            99998642       4689999999999854321           11111122222347899999999999887643 45


Q ss_pred             CeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          271 KVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       271 ~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .+|-+--   |+++++.|+++.+.+
T Consensus       224 eifvl~m---g~~v~I~dlA~~~i~  245 (293)
T PF02719_consen  224 EIFVLDM---GEPVKILDLAEAMIE  245 (293)
T ss_dssp             EEEEE------TCEECCCHHHHHHH
T ss_pred             cEEEecC---CCCcCHHHHHHHHHh
Confidence            5555544   789999999987743

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-21  Score=166.34  Aligned_cols=192  Identities=15%  Similarity=0.157  Sum_probs=136.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+....  ...++.++++|++| .+++.++++.      
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999999999997654432211  23568899999999 7877776542      


Q ss_pred             CCCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||+|.......    .+...    .         +.+++++++.+.++||++||...+...            .
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~------------~  148 (252)
T PRK06138         81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG------------R  148 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC------------C
Confidence            49999999996432111    11111    0         566777777778899999998653221            1


Q ss_pred             hhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeec----------ccCccccCCcCHHHHHHHHH
Q 022495          198 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME----------TEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~----------~~~~~~~~~i~~~Dva~~i~  260 (296)
                      ....|+.+|.+.+.+++.       .++++++++||+++++.....+...          ........+++++|+|++++
T Consensus       149 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  228 (252)
T PRK06138        149 GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAAL  228 (252)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            245699999999877642       4899999999999887533211100          00111223789999999999


Q ss_pred             HHhcCCC
Q 022495          261 EALLHPE  267 (296)
Q Consensus       261 ~~l~~~~  267 (296)
                      .++..+.
T Consensus       229 ~l~~~~~  235 (252)
T PRK06138        229 FLASDES  235 (252)
T ss_pred             HHcCchh
Confidence            9887754

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=169.07  Aligned_cols=190  Identities=14%  Similarity=0.202  Sum_probs=133.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++|+++||||+|+||+++++.|+++|++|++.+|+.+...+..   .....++.++.+|++| .+++.++++.      
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG   82 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999999999876655332   1123468889999999 7877766543      


Q ss_pred             CCCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      ++|+||||||.......    ...+.    .         +.+++.+.+.+ .++||++||...+...            
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~------------  150 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN------------  150 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC------------
Confidence            48999999996432111    11110    0         55666666665 5799999998765422            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-------------cccCccccCCcCHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-------------ETEDTLYEGTISRDQVA  256 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-------------~~~~~~~~~~i~~~Dva  256 (296)
                      .+.+.|+.+|.+++.+.+       ..|+++++|+||.+.++...+....             .........+++++|+|
T Consensus       151 ~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (275)
T PRK05876        151 AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIA  230 (275)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHH
Confidence            235679999998654432       3589999999999988753321100             00001123468999999


Q ss_pred             HHHHHHhcCC
Q 022495          257 EVAVEALLHP  266 (296)
Q Consensus       257 ~~i~~~l~~~  266 (296)
                      +.++.++..+
T Consensus       231 ~~~~~ai~~~  240 (275)
T PRK05876        231 QLTADAILAN  240 (275)
T ss_pred             HHHHHHHHcC
Confidence            9999999754

>PRK06196 oxidoreductase; Provisional

Probab=99.89  E-value=8.1e-22  Score=173.14  Aligned_cols=204  Identities=15%  Similarity=0.074  Sum_probs=137.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      .++++|+|+||||+|+||++++++|+++|++|++++|++++..+.... -.++.++.+|++| .+++.++++.      +
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~-l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG-IDGVEVVMLDLAD-LESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hhhCeEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence            356789999999999999999999999999999999998766543321 1248899999999 7877766531      4


Q ss_pred             CCEEEEcCCCCCCCCC--cc----hhHH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          136 SEAVVCATGFQPGWDL--FA----PWKA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~--~~----~~~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      +|+||||||.......  ..    ...+         +.+++.+++.+.++||++||...+.............+..++.
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~  179 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWL  179 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence            9999999996432111  01    0111         6777888777667999999985432111000000012344567


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee--------cccCccc-cCCcCHHHHHHHHHHHhc
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--------ETEDTLY-EGTISRDQVAEVAVEALL  264 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~--------~~~~~~~-~~~i~~~Dva~~i~~~l~  264 (296)
                      .|+.+|.+.+.+.+       +.|+++++|+||++.++........        ....... ..+.+++|+|..++.++.
T Consensus       180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  259 (315)
T PRK06196        180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAAT  259 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhc
Confidence            89999999987653       2589999999999998753221000        0000000 124678999999999887


Q ss_pred             CCC
Q 022495          265 HPE  267 (296)
Q Consensus       265 ~~~  267 (296)
                      .+.
T Consensus       260 ~~~  262 (315)
T PRK06196        260 SPQ  262 (315)
T ss_pred             CCc
Confidence            654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.89  E-value=9.5e-22  Score=166.88  Aligned_cols=189  Identities=17%  Similarity=0.214  Sum_probs=133.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAVV  140 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~vv  140 (296)
                      |+|+||||+|+||.++++.|+++|++|++++|++++..........++.++.+|++| .+++.++++.      ++|+||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            579999999999999999999999999999999876654432223578899999999 7777765541      399999


Q ss_pred             EcCCCCCCCC-----CcchhH-------------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          141 CATGFQPGWD-----LFAPWK-------------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       141 ~~ag~~~~~~-----~~~~~~-------------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |+||......     ....+.             .+.+++.+++.+.++||++||...+..            ..+...|
T Consensus        80 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~Y  147 (248)
T PRK10538         80 NNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP------------YAGGNVY  147 (248)
T ss_pred             ECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC------------CCCCchh
Confidence            9999642111     111110             166777787777789999999864321            1224569


Q ss_pred             HHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeeccc---Cc--cccCCcCHHHHHHHHHHHhcCCCC
Q 022495          203 LIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMETE---DT--LYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       203 ~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~~---~~--~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      +.+|.+.+.+.+.       .++++++|+||.+.+............   ..  ....++.++|+|++++.++..+..
T Consensus       148 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~  225 (248)
T PRK10538        148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAH  225 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCc
Confidence            9999999887642       479999999999986542211000000   00  012468999999999999876643

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.4e-22  Score=170.39  Aligned_cols=200  Identities=16%  Similarity=0.223  Sum_probs=138.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.++..+...    ....++.++.+|++| .+++.++++.    
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~   83 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNI   83 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhh
Confidence            4678999999999999999999999999999999998766543221    113468899999999 7777766542    


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|++|||||.......    .+.+..             +.+++.+++.+.++||++||...+...            
T Consensus        84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~------------  151 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI------------  151 (263)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC------------
Confidence             49999999996432111    111111             788888888877899999998754221            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-------------eec-ccCc-cccCCcCHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-------------IME-TEDT-LYEGTISRDQ  254 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-------------~~~-~~~~-~~~~~i~~~D  254 (296)
                      ..+..|+.+|.+.+.+.+       ..|++++.|.||.+.++......             ... .... ....+..++|
T Consensus       152 ~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  231 (263)
T PRK08339        152 PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEE  231 (263)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHH
Confidence            124568899999987664       36899999999999886321100             000 0000 1123678999


Q ss_pred             HHHHHHHHhcCCC--CCCCeEEE
Q 022495          255 VAEVAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       255 va~~i~~~l~~~~--~~~~~~~i  275 (296)
                      +|++++.++....  ..+.++.+
T Consensus       232 va~~v~fL~s~~~~~itG~~~~v  254 (263)
T PRK08339        232 IGYLVAFLASDLGSYINGAMIPV  254 (263)
T ss_pred             HHHHHHHHhcchhcCccCceEEE
Confidence            9999888876432  23444444

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.7e-21  Score=167.31  Aligned_cols=185  Identities=22%  Similarity=0.280  Sum_probs=134.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      ++++++||||+|+||++++++|+++|++|++++|++++...     ..+++++++|++| .+++.+++++      ++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----IPGVELLELDVTD-DASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----cCCCeeEEeecCC-HHHHHHHHHHHHHhCCCCCE
Confidence            35789999999999999999999999999999998765432     2468999999999 7887777653      4899


Q ss_pred             EEEcCCCCCCCCCcc----hh----HH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWDLFA----PW----KA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~~~~----~~----~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ||||||.........    ..    ..         +.+++.+++.+.++||++||...+...            .....
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~  144 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA------------PYMAL  144 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC------------CCccH
Confidence            999999754221111    00    00         666677888888999999998655321            12456


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeeccc---------------CccccCCcCHHHHHHHH
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE---------------DTLYEGTISRDQVAEVA  259 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~---------------~~~~~~~i~~~Dva~~i  259 (296)
                      |+.+|.+.+.+++       +.|+++++|+||++.++...........               .........++|+|+.+
T Consensus       145 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  224 (270)
T PRK06179        145 YAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTV  224 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHH
Confidence            9999999987754       3699999999999988753321100000               00112346789999999


Q ss_pred             HHHhcCCC
Q 022495          260 VEALLHPE  267 (296)
Q Consensus       260 ~~~l~~~~  267 (296)
                      +.++..+.
T Consensus       225 ~~~~~~~~  232 (270)
T PRK06179        225 VKAALGPW  232 (270)
T ss_pred             HHHHcCCC
Confidence            99998654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.2e-21  Score=163.74  Aligned_cols=196  Identities=17%  Similarity=0.238  Sum_probs=138.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv~~  142 (296)
                      ++|+++||||+|+||+++++.|+++ ++|++++|+.+...++.. ...+++++++|++| .+.+.+++.+  ++|+|||+
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAA-ELPGATPFPVDLTD-PEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHH-HhccceEEecCCCC-HHHHHHHHHhcCCCCEEEEC
Confidence            3579999999999999999999999 999999999766544322 12468899999999 8888888863  49999999


Q ss_pred             CCCCCCCCC----cchh----H---------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHH
Q 022495          143 TGFQPGWDL----FAPW----K---------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA  205 (296)
Q Consensus       143 ag~~~~~~~----~~~~----~---------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s  205 (296)
                      +|.......    ...+    .         .+++++.+++.+ +++|++||..+++...            +...|+.+
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~------------~~~~y~~~  145 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANP------------GWGSYAAS  145 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCC------------CCchHHHH
Confidence            986432111    0011    0         066666666654 6999999987654321            24568999


Q ss_pred             HHHHHHHHHH-----hC-CcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          206 KLQAEQYIRK-----SG-INYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       206 K~~~e~~~~~-----~~-~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      |.+.+.+++.     .+ ++++.++||.+.++.................+++++|+|++++.+++.+. .+.++++.-
T Consensus       146 K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~-~~~~~~~~~  222 (227)
T PRK08219        146 KFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPP-DAHITEVVV  222 (227)
T ss_pred             HHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCC-CCccceEEE
Confidence            9998876642     24 89999999988765422211111111112357999999999999998764 466777765

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.89  E-value=6.3e-22  Score=169.10  Aligned_cols=200  Identities=16%  Similarity=0.113  Sum_probs=135.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh--hcccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TTLSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .+++|+++||||+|+||++++++|+++|++|++++|++....  +.+.....++.++.+|++| .+++.++++.      
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFG   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcC
Confidence            356899999999999999999999999999999999753211  1111123467889999999 7766655542      


Q ss_pred             CCCEEEEcCCCCCCCCC---cc--hhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL---FA--PWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~---~~--~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      ++|+||||||.......   ..  .+.      .       +.+++.+++.+.++||++||...++..            
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------  151 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN------------  151 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC------------
Confidence            49999999985321111   10  010      0       577888888777899999998765321            


Q ss_pred             hhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCC--ce-eecc--------------cCccccCCcCH
Q 022495          197 NVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTG--NI-IMET--------------EDTLYEGTISR  252 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~--~~-~~~~--------------~~~~~~~~i~~  252 (296)
                        ...|+.+|++.+.+.+.       .++++++|+||+++++....  .. ....              .......+.++
T Consensus       152 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (260)
T PRK12823        152 --RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTI  229 (260)
T ss_pred             --CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCH
Confidence              23599999999987652       48999999999999963110  00 0000              00011224678


Q ss_pred             HHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          253 DQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|+|++++.++....  ..+.++++.+
T Consensus       230 ~dva~~~~~l~s~~~~~~~g~~~~v~g  256 (260)
T PRK12823        230 DEQVAAILFLASDEASYITGTVLPVGG  256 (260)
T ss_pred             HHHHHHHHHHcCcccccccCcEEeecC
Confidence            999999888876432  2456666654

>PRK12320 hypothetical protein; Provisional

Probab=99.89  E-value=7.9e-22  Score=185.70  Aligned_cols=193  Identities=19%  Similarity=0.214  Sum_probs=141.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |+||||||+||||+++++.|+++|++|++++|.+...      ...+++++.+|++| .. +.+++.+ +|+|||+|+..
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d-~~-l~~al~~-~D~VIHLAa~~   71 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------LDPRVDYVCASLRN-PV-LQELAGE-ADAVIHLAPVD   71 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------ccCCceEEEccCCC-HH-HHHHhcC-CCEEEEcCccC
Confidence            4799999999999999999999999999999875431      22578999999999 64 7788888 99999999864


Q ss_pred             CCCCCcc-hhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEec
Q 022495          147 PGWDLFA-PWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRP  225 (296)
Q Consensus       147 ~~~~~~~-~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp  225 (296)
                      ....... .....+++++|++.|+ ++||+||.  ||..      .         .|.    ..|.++..++++++++|+
T Consensus        72 ~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~------~---------~~~----~aE~ll~~~~~p~~ILR~  129 (699)
T PRK12320         72 TSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRP------E---------LYR----QAETLVSTGWAPSLVIRI  129 (699)
T ss_pred             ccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCC------c---------ccc----HHHHHHHhcCCCEEEEeC
Confidence            3211111 1112899999999997 79999986  3321      0         011    467777778899999999


Q ss_pred             CcccCCCCCCc---eeec----ccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          226 GGLRNEPPTGN---IIME----TEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       226 ~~i~g~~~~~~---~~~~----~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +++||+.....   .+..    .........+|++|++++++.++..+. .+ +||+++   +..+++.|+++.+..
T Consensus       130 ~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~-~G-iyNIG~---~~~~Si~el~~~i~~  201 (699)
T PRK12320        130 APPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR-NG-VVDLAT---PDTTNVVTAWRLLRS  201 (699)
T ss_pred             ceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC-CC-EEEEeC---CCeeEHHHHHHHHHH
Confidence            99999853321   1100    000111124699999999999997643 33 999999   789999999888753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.89  E-value=8.2e-22  Score=168.11  Aligned_cols=201  Identities=15%  Similarity=0.123  Sum_probs=137.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      +++++++||||+|+||+++++.|+++|++|++++|+.+...+.......++.++.+|++| .+.+.++++.      ++|
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id   82 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID   82 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence            457899999999999999999999999999999999876654332223468899999999 7777665542      499


Q ss_pred             EEEEcCCCCCCCCC----cchhHH---------HHHH----HHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          138 AVVCATGFQPGWDL----FAPWKA---------INLV----EACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       138 ~vv~~ag~~~~~~~----~~~~~~---------~~~l----~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      ++|||||.......    ...+..         .+++    +.+.+.+ .++||++||......            ..+.
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~~  150 (257)
T PRK07067         83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG------------EALV  150 (257)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC------------CCCC
Confidence            99999986432110    111111         3333    4444432 358999999753211            1235


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce------e-ec--------ccCccccCCcCHHHHHH
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI------I-ME--------TEDTLYEGTISRDQVAE  257 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~------~-~~--------~~~~~~~~~i~~~Dva~  257 (296)
                      ..|+.+|.+.+.+.+       ..++++++|+||.++++......      . ..        ........+.+++|+|+
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (257)
T PRK07067        151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG  230 (257)
T ss_pred             chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence            679999999887764       36899999999999987432110      0 00        00111235789999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEe
Q 022495          258 VAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++.++..+.  ..+.++++.+
T Consensus       231 ~~~~l~s~~~~~~~g~~~~v~g  252 (257)
T PRK07067        231 MALFLASADADYIVAQTYNVDG  252 (257)
T ss_pred             HHHHHhCcccccccCcEEeecC
Confidence            9998887643  3467777765

>PRK09186 flagellin modification protein A; Provisional

Probab=99.89  E-value=5.7e-22  Score=168.88  Aligned_cols=210  Identities=19%  Similarity=0.181  Sum_probs=138.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----C-CCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----K-DNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~-~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||+|+||+++|+.|+++|++|++++|++++..+...    . ....+.++.+|++| .+.+.++++.    
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~   80 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence            357999999999999999999999999999999998766543211    0 12356778999999 7777776653    


Q ss_pred             --CCCEEEEcCCCCCCC-----CCcc--hhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          135 --DSEAVVCATGFQPGW-----DLFA--PWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~-----~~~~--~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                        ++|+|||||+.....     ....  .+.      .       +.+++.+++.+.++||++||...+....... .+.
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-~~~  159 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEI-YEG  159 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchh-ccc
Confidence              389999999743210     0110  000      0       6778888888888999999976543211100 011


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      . +......|+.+|.+.+.+.+       ..++++++++||.++++.................+++++|+|++++.++.+
T Consensus       160 ~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  238 (256)
T PRK09186        160 T-SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSD  238 (256)
T ss_pred             c-ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheecc
Confidence            1 11122369999999988764       358999999999988754211100000001123579999999999998875


Q ss_pred             CC--CCCCeEEEE
Q 022495          266 PE--SSYKVVEII  276 (296)
Q Consensus       266 ~~--~~~~~~~i~  276 (296)
                      ..  ..+..+.+.
T Consensus       239 ~~~~~~g~~~~~~  251 (256)
T PRK09186        239 QSKYITGQNIIVD  251 (256)
T ss_pred             ccccccCceEEec
Confidence            43  235454443

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-21  Score=165.71  Aligned_cols=206  Identities=14%  Similarity=0.107  Sum_probs=139.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhh---cccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++++++||||+||||++++++|+++|++|++++|+... ...   .+.....++.++.+|++| .+.+.++++.     
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   82 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF   82 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999999997542 221   111123468899999999 7877766541     


Q ss_pred             -CCCEEEEcCCCCCCCC--Ccch--hH---HHHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          135 -DSEAVVCATGFQPGWD--LFAP--WK---AINLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~--~~~~--~~---~~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                       .+|+||||||......  ....  .+   ..++++++.+.  ..+++|++||.........    +   +...+..|+.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~----~---~~~~~~~Y~~  155 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTV----K---TMPEYEPVAR  155 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccc----c---CCccccHHHH
Confidence             3999999998643211  1110  11   15666666643  2358999999643211100    0   1112567999


Q ss_pred             HHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee--ecc----cCccccCCcCHHHHHHHHHHHhcCCCCCCC
Q 022495          205 AKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII--MET----EDTLYEGTISRDQVAEVAVEALLHPESSYK  271 (296)
Q Consensus       205 sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~--~~~----~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~  271 (296)
                      +|+++|.+++.       .++++++++||.+.++.......  .+.    .......+++++|+|++++.++..+...++
T Consensus       156 sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~  235 (248)
T PRK07806        156 SKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPSGH  235 (248)
T ss_pred             HHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccCcc
Confidence            99999987753       58999999999887753221100  000    000113578999999999999997767788


Q ss_pred             eEEEEe
Q 022495          272 VVEIIS  277 (296)
Q Consensus       272 ~~~i~~  277 (296)
                      ++++.+
T Consensus       236 ~~~i~~  241 (248)
T PRK07806        236 IEYVGG  241 (248)
T ss_pred             EEEecC
Confidence            899887

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.1e-21  Score=167.23  Aligned_cols=201  Identities=19%  Similarity=0.225  Sum_probs=139.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.+...+..   .....++.++.+|++| .+++.++++.      
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence            34689999999999999999999999999999999876544322   1123468889999999 7877766642      


Q ss_pred             CCCEEEEcCCCCCCCCCc----chh----HH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APW----KA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~----~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||........    ..+    ..         +.+++.+++.+.++||++||...|....            
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~------------  154 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP------------  154 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC------------
Confidence            389999999964321110    111    01         4455555566667999999987664321            


Q ss_pred             hhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCC---ceee---c----ccCccccCCcCHHHHHHHHH
Q 022495          198 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTG---NIIM---E----TEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~---~~~~---~----~~~~~~~~~i~~~Dva~~i~  260 (296)
                      ....|+.+|++.+.+++.       .|+++++||||.+.++....   ....   .    ........+++++|+|++++
T Consensus       155 ~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~  234 (274)
T PRK07775        155 HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAIT  234 (274)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHH
Confidence            235699999999987753       38999999999887653211   1000   0    00111234899999999999


Q ss_pred             HHhcCCCCCCCeEEEEeC
Q 022495          261 EALLHPESSYKVVEIISR  278 (296)
Q Consensus       261 ~~l~~~~~~~~~~~i~~~  278 (296)
                      .++..+. .+.++|+.-.
T Consensus       235 ~~~~~~~-~~~~~~~~~~  251 (274)
T PRK07775        235 FVAETPR-GAHVVNMEVQ  251 (274)
T ss_pred             HHhcCCC-CCCeeEEeec
Confidence            9998764 4567887654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.89  E-value=2.1e-21  Score=164.66  Aligned_cols=200  Identities=17%  Similarity=0.158  Sum_probs=134.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+... ..+.......++.++.+|++| .+++.++++.      +
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999999999987532 222222223568999999999 7777655532      4


Q ss_pred             CCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      +|++|||||.......    ...+.    .         +.+++.+++.+ .+++|++||...+....            
T Consensus        81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------  148 (248)
T TIGR01832        81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI------------  148 (248)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC------------
Confidence            9999999997432111    01111    0         44555555554 57999999987664321            


Q ss_pred             hhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHHHHhc
Q 022495          198 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      ....|+.+|++.+.+.+.       .++++++|+||.+.++..........      .......+++++|+|++++.++.
T Consensus       149 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (248)
T TIGR01832       149 RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLAS  228 (248)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            134589999999877642       48999999999998875321100000      00111357899999999998886


Q ss_pred             CCC--CCCCeEEE
Q 022495          265 HPE--SSYKVVEI  275 (296)
Q Consensus       265 ~~~--~~~~~~~i  275 (296)
                      ...  ..|.++.+
T Consensus       229 ~~~~~~~G~~i~~  241 (248)
T TIGR01832       229 SASDYVNGYTLAV  241 (248)
T ss_pred             ccccCcCCcEEEe
Confidence            533  23444443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-21  Score=168.62  Aligned_cols=186  Identities=19%  Similarity=0.266  Sum_probs=135.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc-------CCCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DDSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~~~d~  138 (296)
                      +|+++||||+|+||+++++.|+++|++|++++|+++...++..   .+++++.+|++| .+++.++++       +++|+
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA---EGLEAFQLDYAE-PESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CCceEEEccCCC-HHHHHHHHHHHHHHcCCCccE
Confidence            6799999999999999999999999999999999877665432   368899999999 777665543       24899


Q ss_pred             EEEcCCCCCCCCCcc----hh------H-------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWDLFA----PW------K-------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~~~~----~~------~-------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ||||||.........    ..      +       .+++++.+++.+.++||++||...+..            ..+.+.
T Consensus        80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~------------~~~~~~  147 (277)
T PRK05993         80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP------------MKYRGA  147 (277)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC------------CCccch
Confidence            999998643221110    00      0       167888898888889999999865432            123467


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-------ec--cc--------------CccccCCcC
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------ME--TE--------------DTLYEGTIS  251 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-------~~--~~--------------~~~~~~~i~  251 (296)
                      |+.+|++.+.+.+       ..|+++++|+||.+.++.......       ..  ..              .......++
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLG  227 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCC
Confidence            9999999998764       469999999999998864321100       00  00              000011468


Q ss_pred             HHHHHHHHHHHhcCCC
Q 022495          252 RDQVAEVAVEALLHPE  267 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~~  267 (296)
                      ++++|+.++.++..+.
T Consensus       228 ~~~va~~i~~a~~~~~  243 (277)
T PRK05993        228 PEAVYAVLLHALTAPR  243 (277)
T ss_pred             HHHHHHHHHHHHcCCC
Confidence            9999999999998764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.89  E-value=2.5e-21  Score=164.28  Aligned_cols=202  Identities=17%  Similarity=0.146  Sum_probs=140.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++|+|+||||+|+||+++++.|+++|++|++++|++++....   +.....++.++.+|+.| .+++.+.+.+      
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999999999996554322   22233468899999999 8888777652      


Q ss_pred             CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||+|......    ....+..             +.+++.+++.+.++||++||...++.           +..
T Consensus        83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~-----------~~~  151 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV-----------GYP  151 (251)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc-----------CCC
Confidence            3999999998654311    1111100             44445556667789999999876511           112


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---ec--ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---ME--TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~~--~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ....|+.+|.+++.+++       ..++++++++||.++|+.......   ..  ........+++++|+|++++.++..
T Consensus       152 ~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  231 (251)
T PRK12826        152 GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASD  231 (251)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            24569999999887664       248999999999999975322111   00  0011112578999999999988765


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      +.  ..++++++.+
T Consensus       232 ~~~~~~g~~~~~~~  245 (251)
T PRK12826        232 EARYITGQTLPVDG  245 (251)
T ss_pred             cccCcCCcEEEECC
Confidence            43  3577888765

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.3e-21  Score=163.70  Aligned_cols=188  Identities=16%  Similarity=0.226  Sum_probs=135.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      ++|+++||||+|+||+.++++|+++|++|++++|++++..+..   .....++.++.+|++| .+.+.++++.      +
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999999999976654332   1123578899999999 7776665542      4


Q ss_pred             CCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||......    ....+..             +.+++.+++.+.++||++||...++...            .
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~  151 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP------------Q  151 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC------------C
Confidence            999999999643211    0011110             5566777777678999999997664321            2


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ...|+.+|.+.+.+.+       ..++++++|+||++.++..........  .....+++++|+|++++.++..+.
T Consensus       152 ~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        152 WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQAD--FDRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccccc--cccccCCCHHHHHHHHHHHHcCCc
Confidence            4569999999987654       358999999999998875322111100  111346899999999999998774

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.88  E-value=1.7e-21  Score=165.78  Aligned_cols=198  Identities=22%  Similarity=0.184  Sum_probs=137.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHh-------cCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAI-------GDD  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~-------~~~  135 (296)
                      +|++|||||+|+||+++++.|+++|++|++++|+.+.......   ....++.++.+|+.| .+++.+++       .+ 
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~-   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG-   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC-
Confidence            3689999999999999999999999999999998765543321   123568899999999 77554443       44 


Q ss_pred             CCEEEEcCCCCCCCC----CcchhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWD----LFAPWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~----~~~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+|||++|......    ......      .       +.+++.+++.+.++||++||...+....            .
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~------------~  146 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP------------F  146 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC------------C
Confidence            899999998643211    001111      0       4566666777888999999986554321            1


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce----e---ec---------ccCccccCCcCHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI----I---ME---------TEDTLYEGTISRDQV  255 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~----~---~~---------~~~~~~~~~i~~~Dv  255 (296)
                      ...|+.+|.+.+.+++       ..+++++++|||.++++......    .   ..         ........+++++|+
T Consensus       147 ~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  226 (255)
T TIGR01963       147 KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEV  226 (255)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHH
Confidence            3568889988886664       24899999999999986421110    0   00         001122358999999


Q ss_pred             HHHHHHHhcCCC--CCCCeEEEEe
Q 022495          256 AEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       256 a~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |++++.++..+.  ..++.|++.+
T Consensus       227 a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       227 AETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             HHHHHHHcCccccCccceEEEEcC
Confidence            999999997642  3567788765

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2e-21  Score=164.42  Aligned_cols=201  Identities=15%  Similarity=0.097  Sum_probs=139.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~v  139 (296)
                      +++++++++||||+|+||+++++.|+++|++|++++|++++..++..  ..+..++.+|++| .+.+.++++.  ++|+|
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~-~~~v~~~~~~~~~~d~v   81 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG--ETGCEPLRLDVGD-DAAIRAALAAAGAFDGL   81 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HhCCeEEEecCCC-HHHHHHHHHHhCCCCEE
Confidence            45678999999999999999999999999999999999876654332  1246788999999 7888777753  48999


Q ss_pred             EEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          140 VCATGFQPGWDL----FAPWK----A---------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       140 v~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      |||||.......    ...+.    .         +.+++.+++.+ .++||++||...+...            .....
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~  149 (245)
T PRK07060         82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------PDHLA  149 (245)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------CCCcH
Confidence            999997432111    11111    0         44444444444 4699999998765432            12456


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----c--ccCccccCCcCHHHHHHHHHHHhcCCC-
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----E--TEDTLYEGTISRDQVAEVAVEALLHPE-  267 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~--~~~~~~~~~i~~~Dva~~i~~~l~~~~-  267 (296)
                      |+.+|.+++.+++       ..+++++.++||.++++.....+..    .  ........+++++|+|++++.++..+. 
T Consensus       150 y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~  229 (245)
T PRK07060        150 YCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAAS  229 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence            9999999998664       2489999999999998753211100    0  001112357999999999999887653 


Q ss_pred             -CCCCeEEEEe
Q 022495          268 -SSYKVVEIIS  277 (296)
Q Consensus       268 -~~~~~~~i~~  277 (296)
                       ..++.+++.+
T Consensus       230 ~~~G~~~~~~~  240 (245)
T PRK07060        230 MVSGVSLPVDG  240 (245)
T ss_pred             CccCcEEeECC
Confidence             2466666543

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=166.52  Aligned_cols=200  Identities=19%  Similarity=0.145  Sum_probs=136.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---C--CCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+++...+...   .  ...++.++.+|++| .+.+.++++.   
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~   82 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEE   82 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999998766543321   1  23468899999999 7777766542   


Q ss_pred             ---CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         ++|++|||||.......    ...+..             +.+++.+++.+.++||++||...+...          
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  152 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII----------  152 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC----------
Confidence               49999999996432111    111111             666677776666799999998654321          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-cc---------cCccccCCcCHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-ET---------EDTLYEGTISRDQVAE  257 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-~~---------~~~~~~~~i~~~Dva~  257 (296)
                        .....|+.+|++.+.+.+       ..|++++.|+||.+.++........ ..         .......+..++|+|.
T Consensus       153 --~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~  230 (260)
T PRK07063        153 --PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAM  230 (260)
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHH
Confidence              124569999999998775       2589999999999987642211000 00         0001123568999999


Q ss_pred             HHHHHhcCCC--CCCCeEEE
Q 022495          258 VAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i  275 (296)
                      +++.++.+..  ..|.+..+
T Consensus       231 ~~~fl~s~~~~~itG~~i~v  250 (260)
T PRK07063        231 TAVFLASDEAPFINATCITI  250 (260)
T ss_pred             HHHHHcCccccccCCcEEEE
Confidence            9998886543  23444444

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.8e-21  Score=165.25  Aligned_cols=201  Identities=18%  Similarity=0.111  Sum_probs=135.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.+++..      ++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCC
Confidence            3568999999999999999999999999999999999776554433223568899999999 7777665542      48


Q ss_pred             CEEEEcCCCCCCCCC---cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          137 EAVVCATGFQPGWDL---FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       137 d~vv~~ag~~~~~~~---~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      |++|||||.......   ...+..             +.+++.++ .+.++||++||...+...            ....
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~------------~~~~  148 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQ------------TGRW  148 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCC------------CCCc
Confidence            999999996432111   111110             55556665 344699999998643221            1245


Q ss_pred             HHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee-----e---cccCccccCCcCHHHHHHHHHHHhcC
Q 022495          201 LTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII-----M---ETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       201 ~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~-----~---~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .|+.+|++.+.+.+.       .++++++|+||.+.++.......     .   .........+..++|+|++++.++..
T Consensus       149 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~  228 (261)
T PRK08265        149 LYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSD  228 (261)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCc
Confidence            699999999877652       58999999999998764221100     0   00001112356789999999988865


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      +.  ..+.++.+.+
T Consensus       229 ~~~~~tG~~i~vdg  242 (261)
T PRK08265        229 AASFVTGADYAVDG  242 (261)
T ss_pred             cccCccCcEEEECC
Confidence            32  3445555533

>PRK05717 oxidoreductase; Validated

Probab=99.88  E-value=2.8e-21  Score=164.66  Aligned_cols=202  Identities=15%  Similarity=0.188  Sum_probs=134.7

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ..++++|+++||||+|+||+++++.|+++|++|++++|++.+..+.......++.++.+|++| .+++.++++.      
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g   83 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFG   83 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            356789999999999999999999999999999999988765443322123468899999999 7776554432      


Q ss_pred             CCCEEEEcCCCCCCC-CC-----cchhH----H-----HHHHHHH----HHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 DSEAVVCATGFQPGW-DL-----FAPWK----A-----INLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~-~~-----~~~~~----~-----~~~l~~~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      ++|+||||||..... ..     ...+.    .     .++++++    ++. .++||++||...+....          
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~----------  152 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEP----------  152 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCC----------
Confidence            489999999975321 11     01111    1     4455554    333 36899999986543221          


Q ss_pred             hhhhHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCceeec-----ccCccccCCcCHHHHHHHHHHHhc
Q 022495          196 LNVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                        ....|+.+|++.+.+++.      .++++++|+||++.++.........     ..........+++|+|+++..++.
T Consensus       153 --~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  230 (255)
T PRK05717        153 --DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLS  230 (255)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence              134699999999977752      2589999999999987532211000     001111346789999999888876


Q ss_pred             CCC--CCCCeEEEE
Q 022495          265 HPE--SSYKVVEII  276 (296)
Q Consensus       265 ~~~--~~~~~~~i~  276 (296)
                      ...  ..+..+.+.
T Consensus       231 ~~~~~~~g~~~~~~  244 (255)
T PRK05717        231 RQAGFVTGQEFVVD  244 (255)
T ss_pred             chhcCccCcEEEEC
Confidence            432  235555553

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.88  E-value=2.2e-22  Score=170.83  Aligned_cols=164  Identities=22%  Similarity=0.267  Sum_probs=99.5

Q ss_pred             EEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhh---hc---ccC----------CCCCeEEEEcccCCC-----hHH
Q 022495           71 VAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAK---TT---LSK----------DNPSLQIVKADVTEG-----SAK  127 (296)
Q Consensus        71 VtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~---~~---~~~----------~~~~~~~~~~D~~d~-----~~~  127 (296)
                      |||||||||++++++|++++.  +|+++.|..+...   .+   +..          ...+++++.+|++++     .+.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  8999999864311   11   110          157999999999983     245


Q ss_pred             HHHHhcCCCCEEEEcCCCCCCCCCc---chhHH---HHHHHHHHHcCCCEEEEEccceeccCccCcc--------CChhh
Q 022495          128 LSEAIGDDSEAVVCATGFQPGWDLF---APWKA---INLVEACRKRGVNRFILISSILVNGAAMGQI--------LNPAY  193 (296)
Q Consensus       128 ~~~~~~~~~d~vv~~ag~~~~~~~~---~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~--------~~~~~  193 (296)
                      +..+.++ +|+|||||+........   ...++   +++++.|.+.+.++|+|+||..+.+...+..        .....
T Consensus        81 ~~~L~~~-v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~  159 (249)
T PF07993_consen   81 YQELAEE-VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLD  159 (249)
T ss_dssp             HHHHHHH---EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE
T ss_pred             hhccccc-cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccch
Confidence            6666677 99999999865433222   22333   9999999977767999999965555444321        01112


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH----hCCcEEEEecCcccCCCCCC
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTG  235 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~~~  235 (296)
                      ......+.|..||+.+|+++++    .|++++|+|||.|.|....+
T Consensus       160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G  205 (249)
T PF07993_consen  160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTG  205 (249)
T ss_dssp             --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS
T ss_pred             hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCc
Confidence            2334456899999999999864    39999999999999965443

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6e-21  Score=162.52  Aligned_cols=203  Identities=16%  Similarity=0.071  Sum_probs=136.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+..............+.++.+|++| .+.+.+++.+      +
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGR   89 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence            45678999999999999999999999999999999998754322111123457789999999 7777666542      3


Q ss_pred             CCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    ...+.    .         +.+++.+++.+.++||++||.......            ..
T Consensus        90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~  157 (255)
T PRK06841         90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL------------ER  157 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC------------CC
Confidence            8999999996432111    01110    0         444455556667899999998643211            12


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----ccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ...|+.+|.+.+.+.+       ..+++++.|+||.+.++.........     ........+.+++|+|++++.++..+
T Consensus       158 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  237 (255)
T PRK06841        158 HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDA  237 (255)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            3569999999887664       25899999999999886532211000     00111235789999999999988754


Q ss_pred             C--CCCCeEEEEe
Q 022495          267 E--SSYKVVEIIS  277 (296)
Q Consensus       267 ~--~~~~~~~i~~  277 (296)
                      .  ..|.++.+.+
T Consensus       238 ~~~~~G~~i~~dg  250 (255)
T PRK06841        238 AAMITGENLVIDG  250 (255)
T ss_pred             ccCccCCEEEECC
Confidence            3  2455555543

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.1e-21  Score=164.59  Aligned_cols=182  Identities=19%  Similarity=0.249  Sum_probs=132.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      +|+|+||||+|+||.+++++|+++|++|++++|+.++..+....  ...++.++.+|++| .+++.++++.      ++|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCCC
Confidence            47999999999999999999999999999999997765543221  11278999999999 7877766543      489


Q ss_pred             EEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          138 AVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      ++|||||........     ..+..             +.+++.+++.+.++||++||...+...            ...
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~------------~~~  148 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL------------PGA  148 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC------------CCC
Confidence            999999964321111     11111             556778888877899999998654221            123


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ..|+.+|++.+.+.+       ..++++++++||.+.++......      ......++++++|+.++.++...
T Consensus       149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------~~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------YPMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------CCCCCccCHHHHHHHHHHHHhCC
Confidence            469999999998763       35899999999999887432110      00112478999999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.88  E-value=4.2e-21  Score=163.24  Aligned_cols=190  Identities=14%  Similarity=0.164  Sum_probs=131.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      ++++|+++||||+++||++++++|+++|++|++++|+... ..+.......++.++.+|++| .+.+.++++.      +
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCC
Confidence            4568999999999999999999999999999998886432 222222234568899999999 7777766542      4


Q ss_pred             CCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhh
Q 022495          136 SEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      +|++|||||........    ..+..             +.+++.+++.+ .++||++||...+....+           
T Consensus        84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-----------  152 (251)
T PRK12481         84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR-----------  152 (251)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC-----------
Confidence            99999999974322111    11111             66667776654 469999999876543211           


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-----cCc-cccCCcCHHHHHHHHHHHhc
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----EDT-LYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-----~~~-~~~~~i~~~Dva~~i~~~l~  264 (296)
                       ...|+.+|++.+.+.+       .+|++++.|+||.+.++..........     ... ....+..++|+|+++..++.
T Consensus       153 -~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s  231 (251)
T PRK12481        153 -VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSS  231 (251)
T ss_pred             -CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence             3469999999987764       368999999999998864321100000     000 11236789999999888886


Q ss_pred             C
Q 022495          265 H  265 (296)
Q Consensus       265 ~  265 (296)
                      .
T Consensus       232 ~  232 (251)
T PRK12481        232 S  232 (251)
T ss_pred             c
Confidence            4

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6.7e-21  Score=167.83  Aligned_cols=192  Identities=14%  Similarity=0.117  Sum_probs=136.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhc------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~------  133 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+++++++...   ....++.++.+|++| .+++.++++      
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~   82 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFG   82 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhc
Confidence            4567999999999999999999999999999999999877654321   134568889999999 787776653      


Q ss_pred             CCCCEEEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          134 DDSEAVVCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      +++|++|||||........    +.+.    .         +.+++.+++.+.++||++||...+...            
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~------------  150 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ------------  150 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC------------
Confidence            1499999999964321111    1110    0         566777777777799999998655321            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------H-hCCcEEEEecCcccCCCCCCceee-cccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEPPTGNIIM-ETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~-~~~~~~~lrp~~i~g~~~~~~~~~-~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      .....|+.+|++.+.+.+       + .+++++.|.||.+.++........ ..........++++|+|++++.++.++.
T Consensus       151 p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        151 PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            124679999998776553       2 379999999999998754321111 1111112346789999999999998764

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.1e-21  Score=163.49  Aligned_cols=198  Identities=18%  Similarity=0.162  Sum_probs=136.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      .++++|+++||||+|+||+++++.|+++|++|++++|+....      ...++.++++|++| .+.+.+++..      +
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   77 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------LPEGVEFVAADLTT-AEGCAAVARAVLERLGG   77 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------cCCceeEEecCCCC-HHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999999986542      22468899999999 7766654421      3


Q ss_pred             CCEEEEcCCCCCCC----C--CcchhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          136 SEAVVCATGFQPGW----D--LFAPWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       136 ~d~vv~~ag~~~~~----~--~~~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      +|+||||||.....    .  ....+.      .       +.+++.+++.+.++||++||...+...           .
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~  146 (260)
T PRK06523         78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL-----------P  146 (260)
T ss_pred             CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-----------C
Confidence            99999999953211    0  011111      0       566777777777899999998654321           1


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-------ecc-----------cCccccCCcC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------MET-----------EDTLYEGTIS  251 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-------~~~-----------~~~~~~~~i~  251 (296)
                      .....|+.+|.+++.+++       ..++++++|+||.+.++.......       ...           .......+..
T Consensus       147 ~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  226 (260)
T PRK06523        147 ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAE  226 (260)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCC
Confidence            124669999999987764       258999999999999875321100       000           0001123567


Q ss_pred             HHHHHHHHHHHhcCC--CCCCCeEEEEe
Q 022495          252 RDQVAEVAVEALLHP--ESSYKVVEIIS  277 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~--~~~~~~~~i~~  277 (296)
                      ++|+|++++.++...  ...++.+.+.+
T Consensus       227 ~~~va~~~~~l~s~~~~~~~G~~~~vdg  254 (260)
T PRK06523        227 PEEVAELIAFLASDRAASITGTEYVIDG  254 (260)
T ss_pred             HHHHHHHHHHHhCcccccccCceEEecC
Confidence            899999998888653  23455565554

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.6e-21  Score=163.90  Aligned_cols=201  Identities=13%  Similarity=0.148  Sum_probs=138.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+++||||+|+||.+++++|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.     
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   81 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhc
Confidence            356789999999999999999999999999999999987655432   1123568899999999 7777766542     


Q ss_pred             -CCCEEEEcCCCCCCCCCc-----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF-----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~-----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||........     +.+.    .         +.+++.+++.+.++||++||...+...           
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------  150 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG-----------  150 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC-----------
Confidence             499999999974321110     1111    0         566778877777899999998654211           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      ...+..|+.+|++.+.+.+       ..++++++|+||++.++.........      ........+..++|+|+.++.+
T Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  230 (254)
T PRK07478        151 FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFL  230 (254)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            1124679999999987764       24799999999999887422110000      0000112356899999999988


Q ss_pred             hcCCC--CCCCeEEE
Q 022495          263 LLHPE--SSYKVVEI  275 (296)
Q Consensus       263 l~~~~--~~~~~~~i  275 (296)
                      +.++.  ..|.++.+
T Consensus       231 ~s~~~~~~~G~~~~~  245 (254)
T PRK07478        231 ASDAASFVTGTALLV  245 (254)
T ss_pred             cCchhcCCCCCeEEe
Confidence            86543  24555544

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.7e-21  Score=169.35  Aligned_cols=191  Identities=15%  Similarity=0.143  Sum_probs=136.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++++|+||||+|+||+++++.|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.     
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~   83 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHC
Confidence            356789999999999999999999999999999999987654332   1134578899999999 7877766532     


Q ss_pred             -CCCEEEEcCCCCCCCC--Cc--chhH-------------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWD--LF--APWK-------------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~--~~--~~~~-------------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|++|||||......  ..  +.+.             .+.+++.+++.+.++||++||...+...            
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~------------  151 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI------------  151 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC------------
Confidence             4999999999643211  00  0000             0677888888777899999999876432            


Q ss_pred             hhhHHHHHHHHHHHHHHHH---------hCCcEEEEecCcccCCCCCCce-eecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          197 NVFGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGNI-IMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~---------~~~~~~~lrp~~i~g~~~~~~~-~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ...+.|+.+|++.+.+.+.         .++++++|+||.+.++...... .............+++|+|++++.++.++
T Consensus       152 ~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        152 PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            1246799999998866531         3699999999999886432110 01111111234678999999999999876

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.4e-21  Score=161.36  Aligned_cols=204  Identities=20%  Similarity=0.145  Sum_probs=136.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+.+. ..+.   +.....++.++.+|++| .+++.+++..   
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~   82 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEA   82 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999997542 2221   11123568889999999 7777665543   


Q ss_pred             ---CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         ++|+||||||.......    ...+..             +.+++.+++.+.++||++||...+....+        
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  154 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG--------  154 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------
Confidence               48999999997432111    011110             56677777777779999999875432211        


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----ccCccccCCcCHHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                        .....|+.+|++.+.+.+       ..|+++++|+||.+.++.........     ........+..++|+|..++.+
T Consensus       155 --~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l  232 (254)
T PRK06114        155 --LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFL  232 (254)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              013569999999887664       35899999999999887533210000     0001112356789999998888


Q ss_pred             hcCCC--CCCCeEEEE
Q 022495          263 LLHPE--SSYKVVEII  276 (296)
Q Consensus       263 l~~~~--~~~~~~~i~  276 (296)
                      +.+..  ..|.++.+.
T Consensus       233 ~s~~~~~~tG~~i~~d  248 (254)
T PRK06114        233 LSDAASFCTGVDLLVD  248 (254)
T ss_pred             cCccccCcCCceEEEC
Confidence            76432  244444443

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.4e-21  Score=162.94  Aligned_cols=189  Identities=17%  Similarity=0.213  Sum_probs=133.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++++|||||+|+||++++++|+++|++|++++|++....+..   .....++.++.+|++| .+.+.+++.+++|+||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD-AIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC-HHHHHHHhcCCCCEEEEC
Confidence            578999999999999999999999999999999876544321   1123468899999999 888988887349999999


Q ss_pred             CCCCCCCCCc----ch----h--HH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHH
Q 022495          143 TGFQPGWDLF----AP----W--KA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA  205 (296)
Q Consensus       143 ag~~~~~~~~----~~----~--~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s  205 (296)
                      ||........    ..    .  +.       +.+++.+++.+.++||++||...+...            .....|+.+
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~------------~~~~~Y~~s  148 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG------------PFTGAYCAS  148 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC------------CCcchhHHH
Confidence            9965322110    00    0  00       567777778777899999998543221            123569999


Q ss_pred             HHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---e--e-------c-ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          206 KLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---I--M-------E-TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       206 K~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~--~-------~-~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      |.+.|.+.+       ..|+++++|+||.+.++......   .  .       . .......+.++.+|+++.++.++..
T Consensus       149 K~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        149 KHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcC
Confidence            999987653       36999999999988765321110   0  0       0 0011223457899999999998876


Q ss_pred             CC
Q 022495          266 PE  267 (296)
Q Consensus       266 ~~  267 (296)
                      +.
T Consensus       229 ~~  230 (257)
T PRK09291        229 DT  230 (257)
T ss_pred             CC
Confidence            54

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.8e-21  Score=166.44  Aligned_cols=188  Identities=18%  Similarity=0.158  Sum_probs=135.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ..+++++++||||+|+||+++++.|+++|++|++++|+.+..++...   .....+.++.+|++| .+++.++++.    
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~  114 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKR  114 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999866543321   123467899999999 7877776651    


Q ss_pred             --CCCEEEEcCCCCCCCCCc------chh------HH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 --DSEAVVCATGFQPGWDLF------APW------KA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~------~~~------~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                        ++|+||||||........      ...      +.       +.+++.+++.+.++||++||.+++....        
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  186 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS--------  186 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC--------
Confidence              399999999965322111      000      00       5666777777778999999976543211        


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                         .....|+++|++.+.+++       +.++++++++||.+.++.......     ......++++++|+.++.++...
T Consensus       187 ---p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~-----~~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        187 ---PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA-----YDGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc-----ccCCCCCCHHHHHHHHHHHHhcC
Confidence               124579999999987664       358999999999988875322111     01123579999999999999864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.88  E-value=7e-21  Score=161.56  Aligned_cols=200  Identities=15%  Similarity=0.146  Sum_probs=137.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|||||+|+||++++++|+++|++|++++|+.+...+..   .....++.++.+|++| .+.+.+++..      +
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999876544322   1123568999999999 7877776542      3


Q ss_pred             CCEEEEcCCCCCCCC----Ccchh----HH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWD----LFAPW----KA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~----~~~~~----~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||+|......    ....+    ..         +.+++.+++.+.++||++||..++....+            
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~------------  148 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG------------  148 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC------------
Confidence            999999998643211    11111    01         45566666777789999999977654321            


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee--cc-------cCc-cccCCcCHHHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--ET-------EDT-LYEGTISRDQVAEVAVE  261 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~--~~-------~~~-~~~~~i~~~Dva~~i~~  261 (296)
                      ...|+.+|++.+.+.+       ..++++++++||.++++........  .+       ... ....+.+++|+|+++..
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  228 (250)
T TIGR03206       149 EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILF  228 (250)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHH
Confidence            3459999988877664       2489999999999988742211100  00       000 11235789999999998


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++..+.  ..++++.+.+
T Consensus       229 l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       229 FSSDDASFITGQVLSVSG  246 (250)
T ss_pred             HcCcccCCCcCcEEEeCC
Confidence            887543  2456676654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.88  E-value=3.5e-21  Score=160.69  Aligned_cols=188  Identities=16%  Similarity=0.187  Sum_probs=142.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHH-------h
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEA-------I  132 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~-------~  132 (296)
                      .+.++++||||||++++|+.+|.+|+++|.++++++.+.+...+....  ...++..+.||++| .+.+.+.       +
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEV  112 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhc
Confidence            466799999999999999999999999999999999998765543221  11379999999999 6655443       3


Q ss_pred             cCCCCEEEEcCCCCCCCCCcc--hhHH---------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          133 GDDSEAVVCATGFQPGWDLFA--PWKA---------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       133 ~~~~d~vv~~ag~~~~~~~~~--~~~~---------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      + ++|++|||||+.+.....+  +.+.               +++++.|.+..-+|||.++|+..+-+.           
T Consensus       113 G-~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~-----------  180 (300)
T KOG1201|consen  113 G-DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP-----------  180 (300)
T ss_pred             C-CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC-----------
Confidence            4 4999999999865432211  1111               999999999888999999999754322           


Q ss_pred             hhhhHHHHHHHHHHHHHHH----------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          196 LNVFGLTLIAKLQAEQYIR----------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~----------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                       .....|++||.++..+.+          ..|++.+.+.|+.+-+.+..+    ........+.+.++.+|+.+++++..
T Consensus       181 -~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~----~~~~~~l~P~L~p~~va~~Iv~ai~~  255 (300)
T KOG1201|consen  181 -AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG----ATPFPTLAPLLEPEYVAKRIVEAILT  255 (300)
T ss_pred             -ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC----CCCCccccCCCCHHHHHHHHHHHHHc
Confidence             225669999999986653          147999999999998776555    22334445789999999999999987


Q ss_pred             CC
Q 022495          266 PE  267 (296)
Q Consensus       266 ~~  267 (296)
                      ..
T Consensus       256 n~  257 (300)
T KOG1201|consen  256 NQ  257 (300)
T ss_pred             CC
Confidence            65

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.4e-21  Score=164.34  Aligned_cols=201  Identities=18%  Similarity=0.167  Sum_probs=136.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh--hcccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TTLSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++++++++||||+|+||++++++|+++|++|++++|++++..  +.+.....++.++.+|++| .+++.+++++     
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhc
Confidence            4577899999999999999999999999999999999876542  1111134578999999999 7877776642     


Q ss_pred             -CCCEEEEcCCCCCCCCCc---chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF---APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~---~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                       ++|+||||||........   +.+..             +.+++.+++. .++||++||...+...            .
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~------------~  148 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQ------------G  148 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCC------------C
Confidence             489999999964322111   11111             3334444433 4699999998654221            1


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-ec-c---------cCccccCCcCHHHHHHHH
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-ME-T---------EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-~~-~---------~~~~~~~~i~~~Dva~~i  259 (296)
                      +...|+.+|++++.+++       ..+++++.|+||.++++....... .. .         .......+++++|+|+++
T Consensus       149 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  228 (258)
T PRK08628        149 GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTA  228 (258)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHH
Confidence            24579999999998775       248999999999999874221100 00 0         001112468899999999


Q ss_pred             HHHhcCCC--CCCCeEEEE
Q 022495          260 VEALLHPE--SSYKVVEII  276 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~  276 (296)
                      +.++....  ..+..+.+.
T Consensus       229 ~~l~~~~~~~~~g~~~~~~  247 (258)
T PRK08628        229 VFLLSERSSHTTGQWLFVD  247 (258)
T ss_pred             HHHhChhhccccCceEEec
Confidence            99887642  345555554

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-20  Score=161.13  Aligned_cols=202  Identities=14%  Similarity=0.159  Sum_probs=137.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc--hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+..  ...+.+.....++.++.+|++| .+.+.+++++      
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFG   90 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999998732  1222222233568899999999 7877766652      


Q ss_pred             CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|++|||||......    ....+..             +.+++.+++.+.+++|++||...+...            .
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~  158 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG------------K  158 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC------------C
Confidence            3899999999643211    1111111             666677777777899999998765322            1


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHHHHhc
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      ....|+.+|++.+.+.+       ..|++++.|+||.+.++..........      .......+..++|+|..+..++.
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (258)
T PRK06935        159 FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLAS  238 (258)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            24569999999988764       358999999999998864221100000      00111347889999999888776


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      ...  ..+.++.+.+
T Consensus       239 ~~~~~~~G~~i~~dg  253 (258)
T PRK06935        239 RASDYVNGHILAVDG  253 (258)
T ss_pred             hhhcCCCCCEEEECC
Confidence            432  2445554433

>PRK08589 short chain dehydrogenase; Validated

Probab=99.87  E-value=7.9e-21  Score=163.45  Aligned_cols=199  Identities=15%  Similarity=0.115  Sum_probs=136.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++|++|||||+|+||+++++.|+++|++|++++|+ +...+..   .....++.++.+|++| .+++.+++..      
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999998 4443322   1123468899999999 7776655542      


Q ss_pred             CCCEEEEcCCCCCCC-C----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGW-D----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~-~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      ++|++|||||..... .    ....+..             +.+++.+++.+ ++||++||...+....           
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~-----------  149 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADL-----------  149 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCC-----------
Confidence            499999999975321 1    1111110             66777777766 7999999987553221           


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------------cCccccCCcCHHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------------EDTLYEGTISRDQVAE  257 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------------~~~~~~~~i~~~Dva~  257 (296)
                       ....|+.+|++.+.+++       ..|++++.|.||.+.++..........            .......+.+++|+|+
T Consensus       150 -~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  228 (272)
T PRK08589        150 -YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAK  228 (272)
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHH
Confidence             13569999999998765       358999999999998864321100000            0001123568999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEe
Q 022495          258 VAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++.++....  ..+..+.+.+
T Consensus       229 ~~~~l~s~~~~~~~G~~i~vdg  250 (272)
T PRK08589        229 LVVFLASDDSSFITGETIRIDG  250 (272)
T ss_pred             HHHHHcCchhcCcCCCEEEECC
Confidence            9988886432  3455555543

>PLN02253 xanthoxin dehydrogenase

Probab=99.87  E-value=1.1e-20  Score=163.33  Aligned_cols=202  Identities=14%  Similarity=0.072  Sum_probs=133.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+...  ....++.++++|++| .+.+.++++.      
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFG   93 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999999999998655433221  123468899999999 7877776652      


Q ss_pred             CCCEEEEcCCCCCCC-CC---c--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 DSEAVVCATGFQPGW-DL---F--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~-~~---~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      ++|+||||||..... ..   .  +.+..             +.+++.+.+.+.+++|++||....-..           
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------  162 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-----------  162 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-----------
Confidence            499999999964321 10   0  11111             344555555555689999987642111           


Q ss_pred             hhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee--------e-------cccCccccCCcCHH
Q 022495          196 LNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII--------M-------ETEDTLYEGTISRD  253 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~--------~-------~~~~~~~~~~i~~~  253 (296)
                       .....|+.+|++.+.+.+.       .++++++++||.+.++.......        .       ..........++++
T Consensus       163 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  241 (280)
T PLN02253        163 -LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVD  241 (280)
T ss_pred             -CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHH
Confidence             0123599999999987752       48999999999998764211100        0       00001112247899


Q ss_pred             HHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          254 QVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       254 Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |+|++++.++....  ..+..+.+.+
T Consensus       242 dva~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
T PLN02253        242 DVANAVLFLASDEARYISGLNLMIDG  267 (280)
T ss_pred             HHHHHHHhhcCcccccccCcEEEECC
Confidence            99999988876432  2455555544

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8.3e-21  Score=162.02  Aligned_cols=201  Identities=15%  Similarity=0.132  Sum_probs=133.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      .++|+++||||+|+||+++++.|+++|++|+++.+.. +.....   ......++.++.+|++| .+.+.+++++     
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~   85 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL   85 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999998887653 332221   11123568899999999 7777766542     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||.......    ...+.      .       +.+++.+++.+.+++|+++|...+...            
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~------------  153 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN------------  153 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC------------
Confidence             48999999996432110    00111      1       444444444445689999886543221            


Q ss_pred             hhhHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCc--eeecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          197 NVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGN--IIMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~--~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      ..+..|+.+|.+++.+.+.      .+++++.++||.+.+......  +.............+++|+|++++.++..+..
T Consensus       154 p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  233 (258)
T PRK09134        154 PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAPSV  233 (258)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCc
Confidence            1134699999999876653      248999999999876532110  10000011112357899999999999988766


Q ss_pred             CCCeEEEEe
Q 022495          269 SYKVVEIIS  277 (296)
Q Consensus       269 ~~~~~~i~~  277 (296)
                      .++.+.+.+
T Consensus       234 ~g~~~~i~g  242 (258)
T PRK09134        234 TGQMIAVDG  242 (258)
T ss_pred             CCCEEEECC
Confidence            777777765

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.1e-21  Score=161.97  Aligned_cols=201  Identities=15%  Similarity=0.161  Sum_probs=134.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++++++||||+|+||+++|+.|+++|++|+++ .|+.++..+..   .....++.++.+|++| .+++.++++.     
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~   82 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999875 57665443222   1123468899999999 7887766551     


Q ss_pred             -------CCCEEEEcCCCCCCCCCc----chhH------H---HHHHHHHHHc--CCCEEEEEccceeccCccCccCChh
Q 022495          135 -------DSEAVVCATGFQPGWDLF----APWK------A---INLVEACRKR--GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 -------~~d~vv~~ag~~~~~~~~----~~~~------~---~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                             ++|++|||||........    ..+.      .   .++++++.+.  +.+++|++||..++...        
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~--------  154 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF--------  154 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC--------
Confidence                   389999999964322111    1111      1   3444444432  23589999998766432        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee------ecccCccccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII------METEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~------~~~~~~~~~~~i~~~Dva~~i  259 (296)
                          .+...|+.+|.+.+.+.+       +.++++++++||.+.++.......      ..........+++++|+|+++
T Consensus       155 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  230 (254)
T PRK12746        155 ----TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAV  230 (254)
T ss_pred             ----CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHH
Confidence                224569999999987653       257999999999998865321110      000111224467899999999


Q ss_pred             HHHhcCCC--CCCCeEEEEe
Q 022495          260 VEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~  277 (296)
                      ..++..+.  ..+.+|++.+
T Consensus       231 ~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        231 AFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             HHHcCcccCCcCCCEEEeCC
Confidence            88877543  2466777764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.87  E-value=7.9e-21  Score=163.95  Aligned_cols=201  Identities=18%  Similarity=0.145  Sum_probs=138.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+.+...+...   ....++.++++|++| .+.+.++++.    
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   84 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILED   84 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999998765443221   123468899999999 7766665431    


Q ss_pred             --CCCEEEEcCCCCCCCCC-------------------cchhHH-------------HHHHHHHHHcCCCEEEEEcccee
Q 022495          135 --DSEAVVCATGFQPGWDL-------------------FAPWKA-------------INLVEACRKRGVNRFILISSILV  180 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~-------------------~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~  180 (296)
                        ++|+||||||.......                   ...+..             +.+++.+++.+.++||++||...
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  164 (278)
T PRK08277         85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA  164 (278)
T ss_pred             cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence              49999999995321110                   000100             56677787777789999999976


Q ss_pred             ccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-----------c
Q 022495          181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----------E  242 (296)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-----------~  242 (296)
                      +...            .....|+.+|++.+.+++       ..+++++.|+||.+.++..........           .
T Consensus       165 ~~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  232 (278)
T PRK08277        165 FTPL------------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILA  232 (278)
T ss_pred             cCCC------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhc
Confidence            6432            224569999999998775       248999999999999875321110000           0


Q ss_pred             CccccCCcCHHHHHHHHHHHhcC-CC--CCCCeEEE
Q 022495          243 DTLYEGTISRDQVAEVAVEALLH-PE--SSYKVVEI  275 (296)
Q Consensus       243 ~~~~~~~i~~~Dva~~i~~~l~~-~~--~~~~~~~i  275 (296)
                      ......+..++|+|++++.++.. ..  ..+..+.+
T Consensus       233 ~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~v  268 (278)
T PRK08277        233 HTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPV  268 (278)
T ss_pred             cCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEE
Confidence            00112356899999998887765 22  24444444

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8.3e-21  Score=161.13  Aligned_cols=199  Identities=15%  Similarity=0.147  Sum_probs=137.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|+++......   .....++.++.+|++| .+++.++++.     
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   81 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAF   81 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999999876543321   1123467889999999 7776655542     


Q ss_pred             -CCCEEEEcCCCCCCC------C-Ccchh------HH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 -DSEAVVCATGFQPGW------D-LFAPW------KA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~------~-~~~~~------~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                       ++|+||||||.....      + ....+      +.       +.+++.+.+.+.++||++||..+|..          
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------  151 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY----------  151 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC----------
Confidence             399999999964311      0 00111      11       44555555555679999999876531          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee---e-cccC-ccccCCcCHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII---M-ETED-TLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~---~-~~~~-~~~~~~i~~~Dva~~i~~  261 (296)
                           .+.|+.+|++.+.+++.       .++++++++||.+.++.......   . .... .....+.+++|+|++++.
T Consensus       152 -----~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  226 (250)
T PRK07774        152 -----SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLF  226 (250)
T ss_pred             -----ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence                 34699999999987652       47999999999998765332110   0 0000 011235689999999998


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++..+.  ..+++|++.+
T Consensus       227 ~~~~~~~~~~g~~~~v~~  244 (250)
T PRK07774        227 LLSDEASWITGQIFNVDG  244 (250)
T ss_pred             HhChhhhCcCCCEEEECC
Confidence            887642  3567888876

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.3e-20  Score=160.10  Aligned_cols=200  Identities=17%  Similarity=0.129  Sum_probs=135.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++++||||||+|+||++++++|+++|++|++..|+. ......   ......++.++.+|++| .+++.++++.    
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   81 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDR   81 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHH
Confidence            34578999999999999999999999999998877643 222211   11123467788999999 7766655542    


Q ss_pred             --CCCEEEEcCCCCCCCC---Ccch-hH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWD---LFAP-WK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~---~~~~-~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||......   .... ..    .         +.+++.+++  .++||++||..++..            
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~------------  147 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRP------------  147 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCC------------
Confidence              3899999999632211   1110 00    0         344444433  258999999876642            


Q ss_pred             hhhhHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCceee--------cccCccccCCcCHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIM--------ETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~--------~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      ..+...|+.+|.+.+.+++.      .++++++++||.+.++........        .........+++++|+|++++.
T Consensus       148 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  227 (252)
T PRK06077        148 AYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAA  227 (252)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHH
Confidence            22356799999999887752      279999999999987642211000        0001112357999999999999


Q ss_pred             HhcCCCCCCCeEEEEe
Q 022495          262 ALLHPESSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~~~~~~~~i~~  277 (296)
                      ++..+...+++|++.+
T Consensus       228 ~~~~~~~~g~~~~i~~  243 (252)
T PRK06077        228 ILKIESITGQVFVLDS  243 (252)
T ss_pred             HhCccccCCCeEEecC
Confidence            9987766778888876

>PRK06128 oxidoreductase; Provisional

Probab=99.87  E-value=1.4e-20  Score=164.15  Aligned_cols=202  Identities=13%  Similarity=0.111  Sum_probs=134.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch--hh---hcccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+++|++|||||+|+||+++++.|+++|++|++..++.+.  ..   +.+.....++.++.+|++| .+.+.++++.   
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~  130 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVK  130 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHH
Confidence            3678999999999999999999999999999988775432  11   1222234568899999999 7777665542   


Q ss_pred             ---CCCEEEEcCCCCCCCC---C--cchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 ---DSEAVVCATGFQPGWD---L--FAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~---~--~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                         ++|+||||||......   .  .+.+..         ..+++++...  ..++||++||...|....          
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  200 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP----------  200 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC----------
Confidence               4999999999642211   1  111111         4455555432  225999999998775322          


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee----ec--ccCccccCCcCHHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----ME--TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~----~~--~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                        ....|+.+|.+.+.+++       ..|+++++|+||.+.++.......    ..  ........+..++|+|.+++.+
T Consensus       201 --~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l  278 (300)
T PRK06128        201 --TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLL  278 (300)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence              24569999999988764       258999999999999975322100    00  0011112357899999998888


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +....  ..++++++.+
T Consensus       279 ~s~~~~~~~G~~~~v~g  295 (300)
T PRK06128        279 ASQESSYVTGEVFGVTG  295 (300)
T ss_pred             hCccccCccCcEEeeCC
Confidence            76533  2456666655

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=4e-21  Score=161.74  Aligned_cols=194  Identities=15%  Similarity=0.221  Sum_probs=134.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc----ccCCCC-CeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT----LSKDNP-SLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~-~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      ..+.+|+|+|||||++||.++|.+|+++|.+++++.|...+++..    ...... ++.++++|++| .+++.++++.  
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~   86 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAI   86 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHH
Confidence            356799999999999999999999999999888887776554432    111222 59999999999 7877755421  


Q ss_pred             ----CCCEEEEcCCCCCCCCCcchhHH------------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          135 ----DSEAVVCATGFQPGWDLFAPWKA------------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~~~~~~~------------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                          ++|++|||||+... ........                  +.+++.|++.+-+|||.+||+..+-.         
T Consensus        87 ~~fg~vDvLVNNAG~~~~-~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~---------  156 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLV-GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP---------  156 (282)
T ss_pred             HhcCCCCEEEecCccccc-cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC---------
Confidence                49999999998652 21111111                  88999999998789999999975432         


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH----H---hC--CcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHH--HHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR----K---SG--INYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAE--VAVE  261 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~----~---~~--~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~--~i~~  261 (296)
                         .+..+.|.+||.+.+.+.+    +   .+  +.+ +|.||+|-++.....................+|++.  .+..
T Consensus       157 ---~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (282)
T KOG1205|consen  157 ---LPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLGEEGKSQQGPFLRTEDVADPEAVAY  232 (282)
T ss_pred             ---CCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhccccccccccchhhhhhhhhHHHHHH
Confidence               1223479999999998764    1   22  233 699999999865555433322222233455566654  7777


Q ss_pred             HhcCCCCCC
Q 022495          262 ALLHPESSY  270 (296)
Q Consensus       262 ~l~~~~~~~  270 (296)
                      .+..+....
T Consensus       233 ~i~~~~~~~  241 (282)
T KOG1205|consen  233 AISTPPCRQ  241 (282)
T ss_pred             HHhcCcccc
Confidence            777765433

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.2e-20  Score=159.19  Aligned_cols=187  Identities=19%  Similarity=0.211  Sum_probs=133.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++++++||||+|+||.+++++|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.      
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   83 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELG   83 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999999876544321   1123478899999999 7887776651      


Q ss_pred             CCCEEEEcCCCCCCCCC----cchh----HH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPW----KA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~----~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||+|.......    ...+    ..         +.+++.+.+.+.+++|++||...+....            
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------  151 (239)
T PRK07666         84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA------------  151 (239)
T ss_pred             CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC------------
Confidence            39999999986432111    0111    10         4444555566678999999987543321            


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      +...|+.+|.+.+.+++       +.++++++|+||.+.++...... ..  ......++.++|+|++++.++..+
T Consensus       152 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~--~~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        152 VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG-LT--DGNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc-cc--ccCCCCCCCHHHHHHHHHHHHhCC
Confidence            23458999998887653       35899999999999887533221 11  111235789999999999999875

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=6.8e-21  Score=160.96  Aligned_cols=202  Identities=17%  Similarity=0.148  Sum_probs=138.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+|+||||+|+||.++++.|+++|++|++++|++++.....   .....++.++.+|++| .+++.+++++     
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   80 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999987644322   1134568899999999 7777666543     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+|||++|.......    ...+.      .       +.+++.+.+.+.++||++||......            .
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~------------~  148 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG------------N  148 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC------------C
Confidence             37999999986432110    01111      0       44445556677789999999854321            1


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--eec-c-cCccccCCcCHHHHHHHHHHHhcC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--IME-T-EDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--~~~-~-~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .+...|+.+|.+.+.+.+       +.+++++++|||.++++......  ... . .......+++++|++++++.++..
T Consensus       149 ~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~  228 (246)
T PRK05653        149 PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASD  228 (246)
T ss_pred             CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            224568899988876553       25899999999999887543211  000 0 011113468889999999999865


Q ss_pred             C--CCCCCeEEEEe
Q 022495          266 P--ESSYKVVEIIS  277 (296)
Q Consensus       266 ~--~~~~~~~~i~~  277 (296)
                      .  ...+..+++.+
T Consensus       229 ~~~~~~g~~~~~~g  242 (246)
T PRK05653        229 AASYITGQVIPVNG  242 (246)
T ss_pred             hhcCccCCEEEeCC
Confidence            3  23567777766

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.7e-20  Score=159.87  Aligned_cols=201  Identities=16%  Similarity=0.164  Sum_probs=137.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      .+++|+++||||+|+||+++++.|+++|++|+++.++.+...+.+.  ..++.++.+|++| .+++.++++.      ++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~--~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR--EKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRV   80 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH--hCCCeEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999988776543322221  1258899999999 7877766542      49


Q ss_pred             CEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||||.......    ...+..             +.+++.+++.+.++||++||...++..           ....
T Consensus        81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------~~~~  149 (255)
T PRK06463         81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA-----------AEGT  149 (255)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC-----------CCCc
Confidence            999999997432111    011110             677787877667799999998765421           1124


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec---------ccCccccCCcCHHHHHHHHHHHh
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME---------TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~---------~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      ..|+.+|++.+.+.+       ..+++++.|+||++.++.........         ........+.+++|+|++++.++
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  229 (255)
T PRK06463        150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLA  229 (255)
T ss_pred             cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHc
Confidence            569999999987765       25899999999999876432110000         00111123578999999999988


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..|..+.+.+
T Consensus       230 s~~~~~~~G~~~~~dg  245 (255)
T PRK06463        230 SDDARYITGQVIVADG  245 (255)
T ss_pred             ChhhcCCCCCEEEECC
Confidence            6543  3455665543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.87  E-value=1.9e-20  Score=159.90  Aligned_cols=194  Identities=16%  Similarity=0.122  Sum_probs=134.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|++|||||+|+||++++++|+++|++|++++|+....        .++.++.+|++| .+++.++++.      ++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------NDVDYFKVDVSN-KEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------CceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            45689999999999999999999999999999999986432        368899999999 7777665542      49


Q ss_pred             CEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||||......    ..+.+..             +.+++.+++.+.++||++||...+...            ...
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~  141 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT------------RNA  141 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC------------CCC
Confidence            99999999743211    1111111             566777777667899999998765322            235


Q ss_pred             HHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCce--ee--cc-----------cCccccCCcCHHHHHHH
Q 022495          200 GLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNI--IM--ET-----------EDTLYEGTISRDQVAEV  258 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~--~~--~~-----------~~~~~~~~i~~~Dva~~  258 (296)
                      ..|+.+|++.+.+.+.      ..++++.|+||.+.++......  ..  ..           .......+..++|+|++
T Consensus       142 ~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~  221 (258)
T PRK06398        142 AAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYV  221 (258)
T ss_pred             chhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHH
Confidence            6799999999987752      2499999999999876421110  00  00           00011235689999999


Q ss_pred             HHHHhcCCC--CCCCeEEEEe
Q 022495          259 AVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++.++....  ..+.++.+.+
T Consensus       222 ~~~l~s~~~~~~~G~~i~~dg  242 (258)
T PRK06398        222 VAFLASDLASFITGECVTVDG  242 (258)
T ss_pred             HHHHcCcccCCCCCcEEEECC
Confidence            888876432  3455554433

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.87  E-value=2e-20  Score=158.99  Aligned_cols=185  Identities=12%  Similarity=0.131  Sum_probs=130.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|++|||||+|+||+.++++|+++|++|++++|+..  .    .....+.++++|++| .+.+.+++++      ++
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~--~----~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL--T----QEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh--h----hcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence            456899999999999999999999999999999999861  1    123568899999999 7777776643      48


Q ss_pred             CEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||+|.......    ...+.    .         +.+++.+++.+.++||++||......            ..+.
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~------------~~~~  145 (252)
T PRK08220         78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP------------RIGM  145 (252)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC------------CCCC
Confidence            999999996432211    01111    0         55555566666679999999754321            1235


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec--------------ccCccccCCcCHHHHHHH
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME--------------TEDTLYEGTISRDQVAEV  258 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~--------------~~~~~~~~~i~~~Dva~~  258 (296)
                      ..|+.+|++.+.+++       .+++++++++||.++++.........              ........+++++|+|++
T Consensus       146 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  225 (252)
T PRK08220        146 AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANA  225 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHH
Confidence            679999999987764       36899999999999987532111000              000112357899999999


Q ss_pred             HHHHhcCC
Q 022495          259 AVEALLHP  266 (296)
Q Consensus       259 i~~~l~~~  266 (296)
                      ++.++...
T Consensus       226 ~~~l~~~~  233 (252)
T PRK08220        226 VLFLASDL  233 (252)
T ss_pred             HHHHhcch
Confidence            99888643

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=1.8e-20  Score=159.77  Aligned_cols=201  Identities=18%  Similarity=0.172  Sum_probs=139.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|+++...+..   .....++.++.+|++| .+.+.+++++    
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   85 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAE   85 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999999999876544322   1123568899999999 7777766543    


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||+|........    ..+..             +.+++.+.+.+.++||++||...+...           
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------  154 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR-----------  154 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-----------
Confidence              489999999964321111    11100             566677777777899999998653221           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~~  262 (296)
                       .....|+.+|.+.+.+++       ..+++++.|+||.+.++..........      .......+++++|++++++.+
T Consensus       155 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  233 (256)
T PRK06124        155 -AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFL  233 (256)
T ss_pred             -CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence             123569999999887664       248999999999999875322111000      001123478999999999998


Q ss_pred             hcCCC--CCCCeEEE
Q 022495          263 LLHPE--SSYKVVEI  275 (296)
Q Consensus       263 l~~~~--~~~~~~~i  275 (296)
                      +..+.  ..|+.+.+
T Consensus       234 ~~~~~~~~~G~~i~~  248 (256)
T PRK06124        234 ASPAASYVNGHVLAV  248 (256)
T ss_pred             cCcccCCcCCCEEEE
Confidence            87653  23544444

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6.9e-21  Score=162.37  Aligned_cols=198  Identities=17%  Similarity=0.227  Sum_probs=132.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++|+++||||+|+||++++++|+++|++|++++|++++.++...   ....++.++.+|++| .+++.++++.      
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG   81 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999998866543321   123568899999999 7777665532      


Q ss_pred             CCCEEEEcCCCCCCCC---Cc--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGWD---LF--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~---~~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      ++|+||||||......   ..  ..+..             +.+++.+++.+ ++||++||...+...            
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~------------  148 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQ------------  148 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCC------------
Confidence            3999999998643211   11  11111             34444444443 699999998654321            


Q ss_pred             hhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee-------------ecc--cCccccCCcCHHH
Q 022495          197 NVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII-------------MET--EDTLYEGTISRDQ  254 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~-------------~~~--~~~~~~~~i~~~D  254 (296)
                      .+...|+.+|.+.+.+++.       .++++++++||.++++.....+.             ...  .......+.+++|
T Consensus       149 ~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (258)
T PRK07890        149 PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDE  228 (258)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHH
Confidence            2345699999999877652       48999999999999875321110             000  0011123678899


Q ss_pred             HHHHHHHHhcCC--CCCCCeEEE
Q 022495          255 VAEVAVEALLHP--ESSYKVVEI  275 (296)
Q Consensus       255 va~~i~~~l~~~--~~~~~~~~i  275 (296)
                      +|++++.++...  ...++++.+
T Consensus       229 va~a~~~l~~~~~~~~~G~~i~~  251 (258)
T PRK07890        229 VASAVLFLASDLARAITGQTLDV  251 (258)
T ss_pred             HHHHHHHHcCHhhhCccCcEEEe
Confidence            999988888642  234444443

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.4e-20  Score=160.20  Aligned_cols=183  Identities=19%  Similarity=0.259  Sum_probs=130.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcch-hhhc---ccC-CCCCeEEEEcccCCChHHHHHHhc-----
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDK-AKTT---LSK-DNPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~~---~~~-~~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      ++++|+||||+|+||+++|++|+++| ++|++++|++++ ..+.   +.. ...+++++.+|++| .+++.+.++     
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAAFAG   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHHHhc
Confidence            46899999999999999999999995 999999998775 3322   111 12368999999999 666544332     


Q ss_pred             CCCCEEEEcCCCCCCCCCc--ch------hHH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          134 DDSEAVVCATGFQPGWDLF--AP------WKA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~~--~~------~~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      +++|++|||+|........  ..      ...         +.+++.+++.+.++||++||...+...            
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~------------  153 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR------------  153 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC------------
Confidence            1499999999875321110  10      111         668889988888899999998643211            


Q ss_pred             hhhHHHHHHHHHHHHHH-------HHhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          197 NVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~-------~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      .+...|+.+|++...+.       +.+++++++++||++.++......       .....++++|+|+.++..+.++.
T Consensus       154 ~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        154 RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK-------EAPLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC-------CCCCCCCHHHHHHHHHHHHHcCC
Confidence            12345899999887553       346899999999999886432210       01235899999999999998653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=3.1e-20  Score=157.11  Aligned_cols=202  Identities=16%  Similarity=0.175  Sum_probs=134.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hh---hcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|+++.|+..+ ..   ..+.....++.++.+|++| .+++.++++.    
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   80 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAE   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999888887653 11   1111234578899999999 7877766542    


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+|||+||........    ....      .       +.+++.+.+.+.++||++||...+....          
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~----------  150 (248)
T PRK05557         81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP----------  150 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC----------
Confidence              389999999864321110    0100      0       4444555556667999999975332111          


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---eec-ccCccccCCcCHHHHHHHHHHHhc
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---IME-TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~~~-~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                        ....|+.+|.+.+.+++       ..++++++++||.+.++......   ... ........+.+++|+++++..++.
T Consensus       151 --~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (248)
T PRK05557        151 --GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLAS  228 (248)
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence              13558899998886654       35899999999998765432210   000 001112346899999999888776


Q ss_pred             C--CCCCCCeEEEEe
Q 022495          265 H--PESSYKVVEIIS  277 (296)
Q Consensus       265 ~--~~~~~~~~~i~~  277 (296)
                      .  ....++.+++.+
T Consensus       229 ~~~~~~~g~~~~i~~  243 (248)
T PRK05557        229 DEAAYITGQTLHVNG  243 (248)
T ss_pred             cccCCccccEEEecC
Confidence            5  334566777754

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.6e-20  Score=161.38  Aligned_cols=187  Identities=13%  Similarity=0.171  Sum_probs=133.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      |+|+||||+|+||++++++|+++|++|++++|+.++.++...   ..+.++.++.+|++| .+++.++++.      ++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999998776553321   234578899999999 7777766541      499


Q ss_pred             EEEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          138 AVVCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      +||||||........    ..+.    .         +.+++.+++.+.++||++||...+...            ....
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~~  147 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG------------PAMS  147 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC------------CCch
Confidence            999999965422111    1111    0         667777888877899999998655322            1245


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeeccc------CccccCCcCHHHHHHHHHHHhcCC
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE------DTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~------~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      .|+.+|++.+.+.+       ..++++++|+||.+.++...........      ......+++++|+|+.++.++...
T Consensus       148 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        148 SYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence            79999998776543       2589999999999988753321100000      001134689999999999999864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.87  E-value=2.1e-20  Score=158.07  Aligned_cols=202  Identities=14%  Similarity=0.136  Sum_probs=134.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++++++||||+|+||+++++.|+++|+.|++.+|+.++..+.......++.++.+|++| .+++.+++..      ++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            3567899999999999999999999999999988888776654432223468899999999 7777765432      39


Q ss_pred             CEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||||......    ....+..             +.+++.+.+.+.++||++||...+....            ..
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~  149 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP------------GQ  149 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC------------CC
Confidence            99999999643211    0111111             3444445555667999999975432211            13


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-c---ccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-E---TEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-~---~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      ..|+.+|.+.+.+.+       ..++++++|+||++.++........ .   ........+.+++|+++++..++..+..
T Consensus       150 ~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~  229 (245)
T PRK12936        150 ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAA  229 (245)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            458888887766553       3589999999998877542211000 0   0011112356799999999888865432


Q ss_pred             --CCCeEEEEe
Q 022495          269 --SYKVVEIIS  277 (296)
Q Consensus       269 --~~~~~~i~~  277 (296)
                        .++++++.+
T Consensus       230 ~~~G~~~~~~~  240 (245)
T PRK12936        230 YVTGQTIHVNG  240 (245)
T ss_pred             CcCCCEEEECC
Confidence              466777655

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.2e-20  Score=157.40  Aligned_cols=202  Identities=17%  Similarity=0.171  Sum_probs=138.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      .+++|+++||||+|+||+++++.|+++|++|++++|++++.....   .....++.++.+|++| .+++.+++..     
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   82 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            346799999999999999999999999999999999877554322   1123568999999999 8887776632     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||+|.......    ...+.    .         +.+++.+.+.+.++||++||...+...            
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------  150 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA------------  150 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC------------
Confidence             39999999996432111    11111    0         444455555556799999997654322            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---e--cccCccccCCcCHHHHHHHHHHHhc
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---M--ETEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~--~~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      .....|+.+|.+.+.+++       ..+++++.|+||.+.++.......   .  .........+++++|+|++++.++.
T Consensus       151 ~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  230 (250)
T PRK12939        151 PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLS  230 (250)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            124569999999998764       258999999999998765321100   0  0001112347899999999999887


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      .+.  ..|+.+.+.+
T Consensus       231 ~~~~~~~G~~i~~~g  245 (250)
T PRK12939        231 DAARFVTGQLLPVNG  245 (250)
T ss_pred             ccccCccCcEEEECC
Confidence            543  3556666554

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=1.3e-20  Score=160.43  Aligned_cols=191  Identities=16%  Similarity=0.148  Sum_probs=132.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++|++++..+..   .....++.++.+|++| .+.+.+++..    
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   83 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKD   83 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999999999876654322   1123467888999999 7777765532    


Q ss_pred             --CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||......    ....+..             +.+++.+++.+.++||++||......            
T Consensus        84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------  151 (254)
T PRK08085         84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG------------  151 (254)
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC------------
Confidence              4999999999643211    1111110             55666666666679999999853211            


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----c--ccCccccCCcCHHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----E--TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~--~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      ......|+.+|++.+.+++       ..|+++++|+||++.++........    .  ........+..++|+|.++..+
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l  231 (254)
T PRK08085        152 RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFL  231 (254)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            1224569999999998765       3589999999999998753321100    0  0011113467899999998887


Q ss_pred             hcC
Q 022495          263 LLH  265 (296)
Q Consensus       263 l~~  265 (296)
                      +..
T Consensus       232 ~~~  234 (254)
T PRK08085        232 SSK  234 (254)
T ss_pred             hCc
Confidence            764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.86  E-value=1.9e-20  Score=160.21  Aligned_cols=189  Identities=17%  Similarity=0.124  Sum_probs=130.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      +++|+++||||+|+||++++++|+++|++|++++|++++..+.......++.++++|++| .+++.++++.      ++|
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence            467999999999999999999999999999999999876654432223468899999999 7777665542      499


Q ss_pred             EEEEcCCCCCCC----C-Ccch----hHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          138 AVVCATGFQPGW----D-LFAP----WKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       138 ~vv~~ag~~~~~----~-~~~~----~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      ++|||||+....    + ..+.    +..             +.+++.+++.+ +++|++||...+....          
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~----------  151 (263)
T PRK06200         83 CFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGG----------  151 (263)
T ss_pred             EEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcCCCC----------
Confidence            999999964311    1 0010    110             55566655544 6899999987654221          


Q ss_pred             hhhhHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCcee---------eccc-----C-ccccCCcCHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNII---------METE-----D-TLYEGTISRDQ  254 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~---------~~~~-----~-~~~~~~i~~~D  254 (296)
                        ....|+.+|++.+.+.+.      .+++++.|.||++.++.......         .+..     . .....+..++|
T Consensus       152 --~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~e  229 (263)
T PRK06200        152 --GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPED  229 (263)
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHH
Confidence              234699999999987752      35999999999998864321100         0000     0 01123578899


Q ss_pred             HHHHHHHHhcCC
Q 022495          255 VAEVAVEALLHP  266 (296)
Q Consensus       255 va~~i~~~l~~~  266 (296)
                      +|++++.++...
T Consensus       230 va~~~~fl~s~~  241 (263)
T PRK06200        230 HTGPYVLLASRR  241 (263)
T ss_pred             Hhhhhhheeccc
Confidence            999988877644

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2e-20  Score=159.06  Aligned_cols=202  Identities=13%  Similarity=0.180  Sum_probs=138.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|+++||||+|+||.+++++|+++|++|++++|+.++......   ....++.++++|+.| .+.+.++++.    
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   82 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRER   82 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999998765543321   123467889999999 7766655542    


Q ss_pred             --CCCEEEEcCCCCCCC----C-CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGW----D-LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~----~-~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|+||||||.....    + ....+..             +.+++.+++.+.+++|++||...+..           
T Consensus        83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------  151 (252)
T PRK07035         83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----------  151 (252)
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----------
Confidence              499999999853211    1 1111110             56667777777789999999754321           


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee----ecc--cCccccCCcCHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII----MET--EDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~----~~~--~~~~~~~~i~~~Dva~~i~~  261 (296)
                       ..+.+.|+.+|++++.+++.       .|++++.|.||.+.++.......    ...  .......+..++|+|+.++.
T Consensus       152 -~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  230 (252)
T PRK07035        152 -GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLY  230 (252)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHH
Confidence             12346699999999987752       48999999999998865322110    000  00112346789999999988


Q ss_pred             HhcCCC--CCCCeEEEE
Q 022495          262 ALLHPE--SSYKVVEII  276 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~  276 (296)
                      ++.+..  ..+.++.+.
T Consensus       231 l~~~~~~~~~g~~~~~d  247 (252)
T PRK07035        231 LASDASSYTTGECLNVD  247 (252)
T ss_pred             HhCccccCccCCEEEeC
Confidence            886543  244455443

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.4e-20  Score=160.89  Aligned_cols=202  Identities=16%  Similarity=0.160  Sum_probs=136.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-CCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      .+++++++||||+|+||+++++.|+++|++|++++|+.+...+.... ...++.++.+|++| .+++.++++.      +
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERFGG   86 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence            45689999999999999999999999999999999987655443211 11257889999999 7877766542      3


Q ss_pred             CCEEEEcCCCCCCCCC---c--chhH----H---------HHHHHHHHHcCC-CEEEEEccceeccCccCccCChhhhhh
Q 022495          136 SEAVVCATGFQPGWDL---F--APWK----A---------INLVEACRKRGV-NRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~---~--~~~~----~---------~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      +|+|||++|.......   .  ..+.    .         +.+++.++..+. ++||++||.......            
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~------------  154 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY------------  154 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC------------
Confidence            9999999997522111   0  0000    0         444455555555 678888886532211            


Q ss_pred             hhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee----------ec---c--cCccccCCcCHHH
Q 022495          197 NVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII----------ME---T--EDTLYEGTISRDQ  254 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~----------~~---~--~~~~~~~~i~~~D  254 (296)
                      .....|+.+|.+.+.+++.       .++++++||||+++++.......          ..   .  .......+++++|
T Consensus       155 ~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  234 (264)
T PRK12829        155 PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPED  234 (264)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHH
Confidence            1234699999999877642       48999999999999875321110          00   0  0001124799999


Q ss_pred             HHHHHHHHhcCC--CCCCCeEEEEe
Q 022495          255 VAEVAVEALLHP--ESSYKVVEIIS  277 (296)
Q Consensus       255 va~~i~~~l~~~--~~~~~~~~i~~  277 (296)
                      +|++++.++...  ...++.+++.+
T Consensus       235 ~a~~~~~l~~~~~~~~~g~~~~i~~  259 (264)
T PRK12829        235 IAATALFLASPAARYITGQAISVDG  259 (264)
T ss_pred             HHHHHHHHcCccccCccCcEEEeCC
Confidence            999988887642  33567777776

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.7e-20  Score=156.26  Aligned_cols=201  Identities=16%  Similarity=0.183  Sum_probs=134.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc----chhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL----DKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~----~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      +++|+++||||+|+||+++++.|+++|++|++++|..    +...+.   ......++.++.+|+.| .+.+.+.++.  
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~   82 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRD-FAATRAALDAGV   82 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHH
Confidence            4678999999999999999999999999999977642    222211   11123578899999999 7877776631  


Q ss_pred             ----CCCEEEEcCCCCCCCCC----cchhH----H-----HHHHHHHH-----HcCCCEEEEEccceeccCccCccCChh
Q 022495          135 ----DSEAVVCATGFQPGWDL----FAPWK----A-----INLVEACR-----KRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~----~~~~~----~-----~~~l~~~~-----~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                          ++|+||||||.......    ...+.    .     .++++++.     +.+.++||++||...+...        
T Consensus        83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  154 (249)
T PRK12827         83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN--------  154 (249)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC--------
Confidence                39999999997542111    11111    0     55555554     5566799999998765432        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc--cCccccCCcCHHHHHHHHHHHh
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET--EDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~--~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                          .+...|+.+|.+.+.+++       ..++++++++||.+.++..........  .......+.+++|+|++++.++
T Consensus       155 ----~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (249)
T PRK12827        155 ----RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLV  230 (249)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHc
Confidence                124568999998887654       248999999999999875433221100  0011123458999999988888


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..++.+++.+
T Consensus       231 ~~~~~~~~g~~~~~~~  246 (249)
T PRK12827        231 SDAASYVTGQVIPVDG  246 (249)
T ss_pred             CcccCCccCcEEEeCC
Confidence            6532  2355666644

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.6e-20  Score=160.40  Aligned_cols=188  Identities=18%  Similarity=0.145  Sum_probs=130.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-CCCCeEEEEcccCCChHHHHHHhcC-------CCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD-------DSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~-------~~d  137 (296)
                      ||+++||||+|+||+++++.|+++|++|++++|+++...+.... ...++.++.+|++| .+.+.+++++       ++|
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence            47899999999999999999999999999999998766544321 13578999999999 7777765542       489


Q ss_pred             EEEEcCCCCCCCCCc----chhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          138 AVVCATGFQPGWDLF----APWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~----~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      +||||||........    ....      .       +.+++.+++.+.++||++||...+....            ...
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~  147 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP------------GLA  147 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC------------Cch
Confidence            999999975321111    1111      0       4555666666678999999985432211            145


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--eecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--IMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      .|+.+|++.+.+.+       ..++++++|+||.+.++......  ............+.++|+|++++.++..+
T Consensus       148 ~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        148 VYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhCC
Confidence            68999999887664       24899999999999876533200  00000111123578899999999999654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.86  E-value=3e-20  Score=158.64  Aligned_cols=198  Identities=14%  Similarity=0.109  Sum_probs=133.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---C-C-CCCeEEEEcccCCChHHHHHHhcC------
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K-D-NPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~-~-~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +|+|+||||+|+||++++++|+++|++|++++|+.........   . . ..++.++.+|++| .+.+.+++.+      
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999998765433221   0 1 1468899999999 7776655532      


Q ss_pred             CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcC-CCEEEEEcccee-ccCccCccCChhhhh
Q 022495          135 DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRG-VNRFILISSILV-NGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~-~~~~~~~~~~~~~~~  195 (296)
                      ++|++|||||......    ....+..             +.+++.+++.+ .++||++||... ++.            
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------------  148 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------------  148 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------------
Confidence            4899999998643211    1111111             56667776666 469999999753 221            


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee--------cc--------cCccccCCcCH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--------ET--------EDTLYEGTISR  252 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~--------~~--------~~~~~~~~i~~  252 (296)
                       .....|+.+|++.+.+++       +.|+++++++||.+++.........        ..        .......++++
T Consensus       149 -~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (259)
T PRK12384        149 -KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDY  227 (259)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCH
Confidence             113569999999876653       4689999999998766432111100        00        00112347899


Q ss_pred             HHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          253 DQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|++++++.++....  ..+.++++.+
T Consensus       228 ~dv~~~~~~l~~~~~~~~~G~~~~v~~  254 (259)
T PRK12384        228 QDVLNMLLFYASPKASYCTGQSINVTG  254 (259)
T ss_pred             HHHHHHHHHHcCcccccccCceEEEcC
Confidence            999999988876442  2467777766

>PRK08264 short chain dehydrogenase; Validated

Probab=99.86  E-value=5e-20  Score=155.25  Aligned_cols=177  Identities=24%  Similarity=0.248  Sum_probs=130.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV  140 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv  140 (296)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+.++..+    ...++.++.+|+.| .+.+.+++..  ++|+||
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi   78 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTD-PASVAAAAEAASDVTILV   78 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCC-HHHHHHHHHhcCCCCEEE
Confidence            4578999999999999999999999998 99999998876543    23578999999999 8888877764  489999


Q ss_pred             EcCCCCC-CCC--Cc--chhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          141 CATGFQP-GWD--LF--APWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       141 ~~ag~~~-~~~--~~--~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |++|... ...  ..  +.+.      .       +.+++.+++.+.++||++||...+...            .+...|
T Consensus        79 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~------------~~~~~y  146 (238)
T PRK08264         79 NNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF------------PNLGTY  146 (238)
T ss_pred             ECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC------------CCchHh
Confidence            9999722 111  11  1110      0       444444556677899999998765422            224679


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      +.+|.+.+.+.+       +.++++++++||.+.++.....         ....++++|+++.++..+...
T Consensus       147 ~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~---------~~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        147 SASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL---------DAPKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC---------CcCCCCHHHHHHHHHHHHhCC
Confidence            999999987664       2489999999999987642211         112688899999999888754

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.86  E-value=2e-20  Score=160.85  Aligned_cols=169  Identities=19%  Similarity=0.245  Sum_probs=125.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchh------hhccc-------CCCCCeEEEEcccCCC-----hHH
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKA------KTTLS-------KDNPSLQIVKADVTEG-----SAK  127 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~------~~~~~-------~~~~~~~~~~~D~~d~-----~~~  127 (296)
                      +++|+||||||+|.+++.+|+.+- .+|+|++|-.+..      .+.+.       ....+++.+.+|+..+     ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999874 6999999987522      22221       2347899999999863     456


Q ss_pred             HHHHhcCCCCEEEEcCCCCCCCC---CcchhHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh--------
Q 022495          128 LSEAIGDDSEAVVCATGFQPGWD---LFAPWKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY--------  193 (296)
Q Consensus       128 ~~~~~~~~~d~vv~~ag~~~~~~---~~~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~--------  193 (296)
                      +.++-+. +|.||||++......   .....++   ..+++.|...+.|.+.|+||++++........+...        
T Consensus        81 ~~~La~~-vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~  159 (382)
T COG3320          81 WQELAEN-VDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRN  159 (382)
T ss_pred             HHHHhhh-cceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccccc
Confidence            7777777 999999998654221   1222232   899999988888899999999986544332222111        


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCCCc
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTGN  236 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~---~~~~~~~lrp~~i~g~~~~~~  236 (296)
                      ....+.+.|+.||+.+|.++++   .|++++|+|||+|.|+...|.
T Consensus       160 ~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~  205 (382)
T COG3320         160 VGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGA  205 (382)
T ss_pred             ccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCc
Confidence            1234567899999999999974   589999999999999876554

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.3e-20  Score=157.91  Aligned_cols=182  Identities=19%  Similarity=0.195  Sum_probs=130.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHHHHHHhcC---CCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD---DSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~---~~d~  138 (296)
                      ||+++||||+|+||.++++.|+++|++|++++|++++..+...    ....++.++++|++| .+.+.+++++   ++|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHHhhcCCE
Confidence            4689999999999999999999999999999999876543221    123578999999999 7777776654   3799


Q ss_pred             EEEcCCCCCCCCCcc-hh-------HH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWDLFA-PW-------KA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~~~~-~~-------~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ||||+|......... ..       ..         +.+++.+.+.+.++||++||.......            .....
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~  147 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR------------ASNYV  147 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC------------CCCcc
Confidence            999998643221110 00       01         555566666677899999998542211            11345


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      |+.+|++.+.+.+       +.++++++++||.+.++...+..      .....+++++|+|+.++..+..+
T Consensus       148 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        148 YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC------CCccccCCHHHHHHHHHHHHhCC
Confidence            8999999887654       35899999999999987432210      01123678999999999999864

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.1e-20  Score=157.27  Aligned_cols=203  Identities=14%  Similarity=0.132  Sum_probs=136.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.++.++...   ....++.++.+|++| .+++.++++.     
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   84 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAEL   84 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999998766543321   123568889999999 7777665542     


Q ss_pred             -CCCEEEEcCCCCCCCC----CcchhH----H---------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWD----LFAPWK----A---------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~----~~~~~~----~---------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|++|||||......    ....+.    .         +.+++.+.+.+ .++||++||........          
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  154 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV----------  154 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC----------
Confidence             4999999999643211    111111    1         55666666654 35899999975321100          


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee--c-ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--E-TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~--~-~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ......|+.+|++.+.+.+       ..|++++.|+||.+.++........  . ........+..++|+|++++.++..
T Consensus       155 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~  234 (253)
T PRK05867        155 PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASE  234 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            0113569999999998765       3589999999999988753221100  0 0001123467899999998888764


Q ss_pred             CC--CCCCeEEEE
Q 022495          266 PE--SSYKVVEII  276 (296)
Q Consensus       266 ~~--~~~~~~~i~  276 (296)
                      ..  ..|.++.+.
T Consensus       235 ~~~~~tG~~i~vd  247 (253)
T PRK05867        235 ASSYMTGSDIVID  247 (253)
T ss_pred             ccCCcCCCeEEEC
Confidence            32  234444443

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.8e-20  Score=159.35  Aligned_cols=201  Identities=14%  Similarity=0.153  Sum_probs=136.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CC--CCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KD--NPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~--~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+...   ..  ..++.++.+|++| .+++.++++.   
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEA   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999866543221   11  2367889999999 7777655432   


Q ss_pred             ---CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         ++|+||||||.......    ...+..             +.+++.+++.+.++||++||...+...          
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  153 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE----------  153 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC----------
Confidence               49999999996432111    001110             677777877767899999998654321          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--------ecc-------cCcc-ccCCcC
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--------MET-------EDTL-YEGTIS  251 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--------~~~-------~~~~-~~~~i~  251 (296)
                        .....|+.+|++.+.+.+       +.|++++.|+||.+.++.....+.        ...       .... ...+..
T Consensus       154 --~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  231 (265)
T PRK07062        154 --PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGR  231 (265)
T ss_pred             --CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCC
Confidence              123568889998876654       368999999999998864322110        000       0001 123568


Q ss_pred             HHHHHHHHHHHhcCCC--CCCCeEEEE
Q 022495          252 RDQVAEVAVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~~--~~~~~~~i~  276 (296)
                      ++|+|++++.++....  ..|.++.+.
T Consensus       232 p~~va~~~~~L~s~~~~~~tG~~i~vd  258 (265)
T PRK07062        232 PDEAARALFFLASPLSSYTTGSHIDVS  258 (265)
T ss_pred             HHHHHHHHHHHhCchhcccccceEEEc
Confidence            8999999888776422  344444443

>PRK09135 pteridine reductase; Provisional

Probab=99.86  E-value=6.4e-20  Score=155.43  Aligned_cols=200  Identities=18%  Similarity=0.164  Sum_probs=132.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhc---cc-CCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LS-KDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~---~~-~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++||||||+|+||++++++|+++|++|++++|+... ....   +. .....+.++.+|++| .+++.++++.     
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   83 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAAF   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999986432 2211   11 112458899999999 8877776652     


Q ss_pred             -CCCEEEEcCCCCCCCC--C--cchhH----H-----HHHHHHHHHc---CCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 -DSEAVVCATGFQPGWD--L--FAPWK----A-----INLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~--~--~~~~~----~-----~~~l~~~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                       ++|+||||||......  .  ...+.    .     .++++++...   ..+.++++++....            .+.+
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~  151 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE------------RPLK  151 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc------------CCCC
Confidence             3899999999643211  1  01111    1     5566665431   22467777664321            1234


Q ss_pred             hhHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCceeec-----ccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          198 VFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      +...|+.+|.++|.+++.      .+++++++|||+++|+.....+...     ........+.+++|+|+++..++...
T Consensus       152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  231 (249)
T PRK09135        152 GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLADA  231 (249)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence            567899999999987753      2699999999999998643211000     00011123457899999986666443


Q ss_pred             -CCCCCeEEEEe
Q 022495          267 -ESSYKVVEIIS  277 (296)
Q Consensus       267 -~~~~~~~~i~~  277 (296)
                       ...+.+|++.+
T Consensus       232 ~~~~g~~~~i~~  243 (249)
T PRK09135        232 SFITGQILAVDG  243 (249)
T ss_pred             ccccCcEEEECC
Confidence             34678899887

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.86  E-value=4.4e-20  Score=156.44  Aligned_cols=201  Identities=18%  Similarity=0.169  Sum_probs=134.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++++++||||+|+||++++++|+++|++|+++.+. ++..++.   +.....++.++.+|++| .+.+.++++.     
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   82 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999876553 3333222   11123568999999999 7777766643     


Q ss_pred             -CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||........    .....             +.+++.+.+.+.++||++||...+...            
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  150 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG------------  150 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC------------
Confidence             489999999974432110    11100             344444445556799999998654321            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--e-c-ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--M-E-TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--~-~-~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .+...|+.+|.+.+.+++       ..++++++++||.+.++.......  . . ........+.+++|++++++.++..
T Consensus       151 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~  230 (247)
T PRK12935        151 FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD  230 (247)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc
Confidence            124569999998887653       248999999999998764222110  0 0 0011123478999999999988865


Q ss_pred             CC-CCCCeEEEEe
Q 022495          266 PE-SSYKVVEIIS  277 (296)
Q Consensus       266 ~~-~~~~~~~i~~  277 (296)
                      .. ..+..+++.+
T Consensus       231 ~~~~~g~~~~i~~  243 (247)
T PRK12935        231 GAYITGQQLNING  243 (247)
T ss_pred             ccCccCCEEEeCC
Confidence            32 4567777765

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.86  E-value=5.2e-20  Score=155.00  Aligned_cols=197  Identities=15%  Similarity=0.112  Sum_probs=131.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~v  139 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+++...+.+.  ..++.++.+|++| .+++.+++..      ++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR--QAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--HcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEE
Confidence            5799999999999999999999999999999998765433222  1347889999999 7776655433      39999


Q ss_pred             EEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC--CCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          140 VCATGFQPGWDLF----APWKA-------------INLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       140 v~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      |||||........    +.+..             +.+++.+++.+  .++||++||......            ...+.
T Consensus        79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~------------~~~~~  146 (236)
T PRK06483         79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG------------SDKHI  146 (236)
T ss_pred             EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC------------CCCCc
Confidence            9999964221111    11111             55667676654  568999999753211            11245


Q ss_pred             HHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCceee-c-ccCccccCCcCHHHHHHHHHHHhcCCCCCCCe
Q 022495          201 LTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIM-E-TEDTLYEGTISRDQVAEVAVEALLHPESSYKV  272 (296)
Q Consensus       201 ~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~-~-~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~  272 (296)
                      .|+.+|++.+.+++.      .++++++|+||.+..+........ . ...........++|+|+++..++......+.+
T Consensus       147 ~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~  226 (236)
T PRK06483        147 AYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLTSCYVTGRS  226 (236)
T ss_pred             cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHHhcCCCcCCcE
Confidence            699999999987752      259999999999865432111000 0 00111122467899999999988754455555


Q ss_pred             EEEEe
Q 022495          273 VEIIS  277 (296)
Q Consensus       273 ~~i~~  277 (296)
                      +.+.+
T Consensus       227 i~vdg  231 (236)
T PRK06483        227 LPVDG  231 (236)
T ss_pred             EEeCc
Confidence            55543

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.4e-20  Score=161.41  Aligned_cols=191  Identities=17%  Similarity=0.166  Sum_probs=133.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      .++++++++||||+|+||.++++.|+++|++|++++|+.++..+....  ....+..+.+|++| .+++.+++++     
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~   83 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence            356789999999999999999999999999999999998766543221  12456667799999 7777665532     


Q ss_pred             -CCCEEEEcCCCCCCCCC--c--chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL--F--APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~--~--~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||.......  .  +.+.    .         +.+++.+.+.+ ++||++||...+...            
T Consensus        84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~------------  150 (296)
T PRK05872         84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR-GYVLQVSSLAAFAAA------------  150 (296)
T ss_pred             CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHhhcCCC------------
Confidence             49999999997432111  0  1110    0         44555555543 699999998765432            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee--------cccCccccCCcCHHHHHHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--------ETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~--------~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      .....|+.+|++.+.+.+       ..+++++++.||++.++........        .........+++++|+|++++.
T Consensus       151 ~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~  230 (296)
T PRK05872        151 PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVD  230 (296)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHH
Confidence            124679999999998764       3689999999999988653321100        0000112346889999999999


Q ss_pred             HhcCC
Q 022495          262 ALLHP  266 (296)
Q Consensus       262 ~l~~~  266 (296)
                      ++...
T Consensus       231 ~~~~~  235 (296)
T PRK05872        231 GIERR  235 (296)
T ss_pred             HHhcC
Confidence            98754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=3.6e-20  Score=158.71  Aligned_cols=203  Identities=14%  Similarity=0.088  Sum_probs=140.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|+++||||+|+||.+++++|+++|++|++++|++++..+..   .....++.++++|++| .+++.+++..    
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   84 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKE   84 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence            5667899999999999999999999999999999999876654322   1123468899999999 7877776642    


Q ss_pred             --CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||......    ....+..             +.+++.+++.+.++||++||......            
T Consensus        85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------  152 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG------------  152 (265)
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC------------
Confidence              4999999999743211    1111110             56777777777789999999753211            


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--eccc----------CccccCCcCHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--METE----------DTLYEGTISRDQVA  256 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--~~~~----------~~~~~~~i~~~Dva  256 (296)
                      ......|+.+|.+.+.+.+       ..+++++.|+||.+.++.......  ....          ......+..++|+|
T Consensus       153 ~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  232 (265)
T PRK07097        153 RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLA  232 (265)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHH
Confidence            1124569999999987765       258999999999998874321110  0000          00112367789999


Q ss_pred             HHHHHHhcCC--CCCCCeEEEEe
Q 022495          257 EVAVEALLHP--ESSYKVVEIIS  277 (296)
Q Consensus       257 ~~i~~~l~~~--~~~~~~~~i~~  277 (296)
                      +.++.++...  ...++.+.+.+
T Consensus       233 ~~~~~l~~~~~~~~~g~~~~~~g  255 (265)
T PRK07097        233 GPAVFLASDASNFVNGHILYVDG  255 (265)
T ss_pred             HHHHHHhCcccCCCCCCEEEECC
Confidence            9999998763  23455554443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.86  E-value=2.2e-20  Score=159.86  Aligned_cols=189  Identities=14%  Similarity=0.107  Sum_probs=128.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.+...++......++.++++|++| .+++.++++.      ++|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID   81 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence            568999999999999999999999999999999998876655443223468889999999 7766655532      489


Q ss_pred             EEEEcCCCCCCC----CCcc-----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          138 AVVCATGFQPGW----DLFA-----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       138 ~vv~~ag~~~~~----~~~~-----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      ++|||||.....    +...     .+..             +.+++.+++.+ +++|++||...+...           
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~-----------  149 (262)
T TIGR03325        82 CLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPN-----------  149 (262)
T ss_pred             EEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCC-----------
Confidence            999999963210    1000     1111             55556665544 689998887643211           


Q ss_pred             hhhhHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCc-eeec--------cc----Cc-cccCCcCHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGN-IIME--------TE----DT-LYEGTISRDQV  255 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~-~~~~--------~~----~~-~~~~~i~~~Dv  255 (296)
                       .....|+.+|.+.+.+.+.      ..++++.|.||++.++..... ....        ..    .. ....+..++|+
T Consensus       150 -~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ev  228 (262)
T TIGR03325       150 -GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEY  228 (262)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHh
Confidence             1234699999999987752      248999999999988753211 0000        00    00 11235778999


Q ss_pred             HHHHHHHhcCC
Q 022495          256 AEVAVEALLHP  266 (296)
Q Consensus       256 a~~i~~~l~~~  266 (296)
                      |++++.++.++
T Consensus       229 a~~~~~l~s~~  239 (262)
T TIGR03325       229 TGAYVFFATRG  239 (262)
T ss_pred             hhheeeeecCC
Confidence            99988877653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1e-19  Score=152.95  Aligned_cols=190  Identities=18%  Similarity=0.160  Sum_probs=132.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-----CCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-----DSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~v  139 (296)
                      .+|+++||||+|+||++++++|+++|++|++++|+....        ....++.+|++| .+++.+++..     ++|+|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~v   72 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------FPGELFACDLAD-IEQTAATLAQINEIHPVDAI   72 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------cCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEE
Confidence            468999999999999999999999999999999987541        123578999999 7777766652     38999


Q ss_pred             EEcCCCCCCCCC----cchh----HH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          140 VCATGFQPGWDL----FAPW----KA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       140 v~~ag~~~~~~~----~~~~----~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |||+|.......    ...+    ..         +.+++.+++.+.++||++||...|+..             ....|
T Consensus        73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------~~~~Y  139 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL-------------DRTSY  139 (234)
T ss_pred             EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-------------CchHH
Confidence            999996432211    0110    00         666788887778899999998765421             13569


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-------cCccccCCcCHHHHHHHHHHHhcCCC-
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-------EDTLYEGTISRDQVAEVAVEALLHPE-  267 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-------~~~~~~~~i~~~Dva~~i~~~l~~~~-  267 (296)
                      +.+|.+.+.+++       +.++++++|+||.+.++..........       ..........++|+|++++.++..+. 
T Consensus       140 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  219 (234)
T PRK07577        140 SAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAG  219 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccC
Confidence            999999987764       358999999999998864321110000       00011124578999999999887653 


Q ss_pred             -CCCCeEEEE
Q 022495          268 -SSYKVVEII  276 (296)
Q Consensus       268 -~~~~~~~i~  276 (296)
                       ..+..+.+.
T Consensus       220 ~~~g~~~~~~  229 (234)
T PRK07577        220 FITGQVLGVD  229 (234)
T ss_pred             CccceEEEec
Confidence             335555553

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.2e-20  Score=158.87  Aligned_cols=203  Identities=14%  Similarity=0.128  Sum_probs=135.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hh---hcccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+... ..   +.+.....++.++.+|++| .+.+.++++.   
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~  120 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVR  120 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999987532 11   1122123468899999999 7777766542   


Q ss_pred             ---CCCEEEEcCCCCCCCCC---c--chhH----H-----HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 ---DSEAVVCATGFQPGWDL---F--APWK----A-----INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~---~--~~~~----~-----~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                         ++|+||||||.......   .  +.+.    .     .++++++...  ..++||++||...|....+         
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~---------  191 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET---------  191 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC---------
Confidence               48999999996432111   1  0111    0     4444444321  2258999999887654321         


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-----cccCccccCCcCHHHHHHHHHHHh
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-----~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                         ...|+.+|++.+.+++       ..+++++.|+||.++++........     .........+.+++|+|++++.++
T Consensus       192 ---~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll  268 (290)
T PRK06701        192 ---LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLA  268 (290)
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHc
Confidence               2458999999987664       2489999999999998743221100     001111234788999999999888


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..+.++.+.+
T Consensus       269 ~~~~~~~~G~~i~idg  284 (290)
T PRK06701        269 SPDSSYITGQMLHVNG  284 (290)
T ss_pred             CcccCCccCcEEEeCC
Confidence            7643  3456666654

>PRK07985 oxidoreductase; Provisional

Probab=99.86  E-value=3.1e-20  Score=161.47  Aligned_cols=201  Identities=14%  Similarity=0.127  Sum_probs=129.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc--hhhh---cccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+++|+++||||+|+||+++++.|+++|++|++..|+..  ..++   .......++.++.+|++| .+++.++++.   
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~  124 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHK  124 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence            467899999999999999999999999999998876532  2221   122223468889999999 7766655432   


Q ss_pred             ---CCCEEEEcCCCCCCCC---C--cchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 ---DSEAVVCATGFQPGWD---L--FAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~---~--~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                         ++|++|||||......   .  ...+..         ..+++++...  ..++||++||...+....          
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~----------  194 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP----------  194 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC----------
Confidence               4899999998632111   1  111111         3333333221  125999999997764321          


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc-e---eecc-cCc-cccCCcCHHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN-I---IMET-EDT-LYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~-~---~~~~-~~~-~~~~~i~~~Dva~~i~~~  262 (296)
                        ....|+.+|++.+.+.+       ..|+++++|+||++.++..... .   .... ... ....+..++|+|++++.+
T Consensus       195 --~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL  272 (294)
T PRK07985        195 --HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYL  272 (294)
T ss_pred             --CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Confidence              13569999999987664       3589999999999998752110 0   0000 001 112367899999998888


Q ss_pred             hcCCC--CCCCeEEEE
Q 022495          263 LLHPE--SSYKVVEII  276 (296)
Q Consensus       263 l~~~~--~~~~~~~i~  276 (296)
                      +....  ..+.++.+.
T Consensus       273 ~s~~~~~itG~~i~vd  288 (294)
T PRK07985        273 ASQESSYVTAEVHGVC  288 (294)
T ss_pred             hChhcCCccccEEeeC
Confidence            76533  234444443

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.8e-20  Score=156.25  Aligned_cols=197  Identities=15%  Similarity=0.080  Sum_probs=133.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.+..     ....++.++++|++| .+++.+++..      ++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   76 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET-----VDGRPAEFHAADVRD-PDQVAALVDAIVERHGRL   76 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh-----hcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999987541     123568899999999 7777766643      38


Q ss_pred             CEEEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHc-CCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWK----A---------INLVEACRKR-GVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |+||||||........    ..+.    .         +.+++.+.+. +.++||++||...+...            ..
T Consensus        77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~  144 (252)
T PRK07856         77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS------------PG  144 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC------------CC
Confidence            9999999964321111    1111    0         3444444443 34799999998654321            12


Q ss_pred             hHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          199 FGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ...|+.+|.+.+.+++.      ..++++.|+||.+.++.........      ........+..++|+|++++.++...
T Consensus       145 ~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~  224 (252)
T PRK07856        145 TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDL  224 (252)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            45699999999987752      2389999999999887432111000      00001123578999999998888653


Q ss_pred             C--CCCCeEEEEe
Q 022495          267 E--SSYKVVEIIS  277 (296)
Q Consensus       267 ~--~~~~~~~i~~  277 (296)
                      .  ..|..+.+.+
T Consensus       225 ~~~i~G~~i~vdg  237 (252)
T PRK07856        225 ASYVSGANLEVHG  237 (252)
T ss_pred             cCCccCCEEEECC
Confidence            2  3455555543

>PRK09242 tropinone reductase; Provisional

Probab=99.86  E-value=6e-20  Score=156.61  Aligned_cols=202  Identities=15%  Similarity=0.120  Sum_probs=136.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---C--CCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+.+...+...   .  ...++.++.+|++| .+.+.+++..  
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~   83 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVE   83 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHH
Confidence            45678999999999999999999999999999999998766543221   1  13468889999999 7766554432  


Q ss_pred             ----CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 ----DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                          ++|+||||||......    ..+.+..             +.+++.+++.+.++||++||...+...         
T Consensus        84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------  154 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV---------  154 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC---------
Confidence                4999999999632111    0011110             555666666667899999998765432         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~  260 (296)
                         ...+.|+.+|.+.+.+++       ..+++++.|+||++.++..........      ......-+...+|++.++.
T Consensus       155 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  231 (257)
T PRK09242        155 ---RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVA  231 (257)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence               124568999999988765       358999999999998875332111000      0001122457899999988


Q ss_pred             HHhcCCC--CCCCeEEEE
Q 022495          261 EALLHPE--SSYKVVEII  276 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~  276 (296)
                      .++....  ..++++.+.
T Consensus       232 ~l~~~~~~~~~g~~i~~~  249 (257)
T PRK09242        232 FLCMPAASYITGQCIAVD  249 (257)
T ss_pred             HHhCcccccccCCEEEEC
Confidence            8886432  235555543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.86  E-value=9.6e-20  Score=155.21  Aligned_cols=203  Identities=17%  Similarity=0.145  Sum_probs=137.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +.+++|+|+||||+|+||+++++.|+++|++|++++|+.+......   .....++.++.+|++| .+++.+++..    
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~   85 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSK   85 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999876543321   1123468889999999 7777665432    


Q ss_pred             --CCCEEEEcCCCCCCCCCc---chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF---APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~---~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                        ++|++|||||........   ..+.    .         +.+++.+.+.+.++||++||......            .
T Consensus        86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~  153 (255)
T PRK06113         86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK------------N  153 (255)
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC------------C
Confidence              489999999964321111   1110    0         34444444555579999999864321            1


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----ccCccccCCcCHHHHHHHHHHHhc
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      .+...|+.+|++.+.+++       ..++++++|.||.+.++.........     ........+..++|++++++.++.
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~  233 (255)
T PRK06113        154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCS  233 (255)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            224569999999998775       25899999999999886533211000     000111235789999999998886


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      ...  ..|.++++.+
T Consensus       234 ~~~~~~~G~~i~~~g  248 (255)
T PRK06113        234 PAASWVSGQILTVSG  248 (255)
T ss_pred             ccccCccCCEEEECC
Confidence            432  2466666655

>PRK06194 hypothetical protein; Provisional

Probab=99.86  E-value=4.7e-20  Score=159.79  Aligned_cols=189  Identities=13%  Similarity=0.138  Sum_probs=130.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ++++++|||||+||||++++++|+++|++|++++|+.+...+..   .....++.++.+|++| .+.+.+++++      
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG   82 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999999876544322   1123468889999999 7887776653      


Q ss_pred             CCCEEEEcCCCCCCCC----CcchhH----H---------HHHHHHHHHcCC------CEEEEEccceeccCccCccCCh
Q 022495          135 DSEAVVCATGFQPGWD----LFAPWK----A---------INLVEACRKRGV------NRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~----~~~~~~----~---------~~~l~~~~~~~~------~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                      ++|+||||||......    ....+.    .         +.+++.+.+.+.      +++|++||...+...       
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  155 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-------  155 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-------
Confidence            3899999999754321    111111    0         566666776654      699999998766432       


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHH---------hCCcEEEEecCcccCCCCCCc----eeeccc-Ccc------------
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGN----IIMETE-DTL------------  245 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~~---------~~~~~~~lrp~~i~g~~~~~~----~~~~~~-~~~------------  245 (296)
                           ...+.|+.+|++.+.+++.         .+++++.+.||.+.+......    ...... ...            
T Consensus       156 -----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T PRK06194        156 -----PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQK  230 (287)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHh
Confidence                 1245699999999887642         258889999998876532211    000000 000            


Q ss_pred             --ccCCcCHHHHHHHHHHHhcC
Q 022495          246 --YEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       246 --~~~~i~~~Dva~~i~~~l~~  265 (296)
                        ..+.++++|+|+.++..+..
T Consensus       231 ~~~~~~~s~~dva~~i~~~~~~  252 (287)
T PRK06194        231 AVGSGKVTAEEVAQLVFDAIRA  252 (287)
T ss_pred             hhhccCCCHHHHHHHHHHHHHc
Confidence              11347999999999998853

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.6e-20  Score=156.96  Aligned_cols=202  Identities=14%  Similarity=0.116  Sum_probs=139.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+..   ...+.++.++.+|++| .+++.++++.     
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~   82 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999999976644322   2234568999999999 7777665542     


Q ss_pred             -CCCEEEEcCCCCCCCC---C--cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWD---L--FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~---~--~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||+|......   .  .+.+..             +.+++.+.+.+.+++|++||...+...           
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------  151 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA-----------  151 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----------
Confidence             4899999999643211   1  111110             455666666666799999998765432           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-------cCccccCCcCHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-------EDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-------~~~~~~~~i~~~Dva~~i~~  261 (296)
                       ..+..|+.+|++.+.+.+       ..+++++.|.||.+.++..........       .......+.+++|+++.+++
T Consensus       152 -~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~  230 (253)
T PRK06172        152 -PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLY  230 (253)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHH
Confidence             124669999999987764       247999999999998765322100000       00011235689999999988


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++.+..  ..|+.+.+.+
T Consensus       231 l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        231 LCSDGASFTTGHALMVDG  248 (253)
T ss_pred             HhCccccCcCCcEEEECC
Confidence            887542  3455555544

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=152.41  Aligned_cols=194  Identities=21%  Similarity=0.257  Sum_probs=132.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|+||||+|+||++++++|+++|++|++++|++++..+....  ...++.++.+|+.| .+++.+.+++      +
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            3568999999999999999999999999999999998765433211  11568899999999 7777766642      3


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+|||++|.......    ......             +.+++.+ +.+.+++|++||...+...            ..
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~------------~~  149 (237)
T PRK07326         83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFF------------AG  149 (237)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCC------------CC
Confidence            9999999986432110    111100             3344544 2345789999998654321            12


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCC-CC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPES-SY  270 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~-~~  270 (296)
                      ...|..+|++.+.+.+       ..++++++|+||.+.++......   ..  .....+.++|++++++.++..+.. ..
T Consensus       150 ~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~---~~--~~~~~~~~~d~a~~~~~~l~~~~~~~~  224 (237)
T PRK07326        150 GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP---SE--KDAWKIQPEDIAQLVLDLLKMPPRTLP  224 (237)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc---ch--hhhccCCHHHHHHHHHHHHhCCccccc
Confidence            4568899998876554       25899999999999876432211   00  011248899999999999987653 33


Q ss_pred             CeEEEE
Q 022495          271 KVVEII  276 (296)
Q Consensus       271 ~~~~i~  276 (296)
                      ....+.
T Consensus       225 ~~~~~~  230 (237)
T PRK07326        225 SKIEVR  230 (237)
T ss_pred             cceEEe
Confidence            444443

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=155.27  Aligned_cols=187  Identities=13%  Similarity=0.184  Sum_probs=129.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|||||+|+||+++++.|+++|++|++++|++.+..+..   .....++.++.+|++| .+.+.++++.      ++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            368999999999999999999999999999999876544321   1134578899999999 7877766652      38


Q ss_pred             CEEEEcCCCCCCCCCcch-----h----H--H---HHHHHHH----HHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLFAP-----W----K--A---INLVEAC----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~-----~----~--~---~~~l~~~----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |+||||||..........     +    .  .   .++++.+    .+. .+++|++||...+...            .+
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------~~  146 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGV------------PT  146 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCC------------CC
Confidence            999999986432211111     0    0  0   3344443    333 4799999998766432            12


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-----ecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-----~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ...|+.+|.+.+.+.+       +.++++++++||.+.++.......     ..........+++++|+|++++.++...
T Consensus       147 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        147 RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCC
Confidence            4569999999987764       358999999999998764321110     0000111125799999999999999753

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=9.2e-20  Score=153.34  Aligned_cols=192  Identities=16%  Similarity=0.168  Sum_probs=130.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCCh-HHHHHHhcCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS-AKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~d~vv~~  142 (296)
                      +++|+++||||+|+||+++++.|+++|++|++++|++...      ...++.++.+|++| . +.+.+.++. +|+||||
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~-~~~~~~~~~~~-id~lv~~   74 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------LSGNFHFLQLDLSD-DLEPLFDWVPS-VDILCNT   74 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------cCCcEEEEECChHH-HHHHHHHhhCC-CCEEEEC
Confidence            5689999999999999999999999999999999986432      12468899999998 5 444555555 9999999


Q ss_pred             CCCCCCC---CC--cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          143 TGFQPGW---DL--FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       143 ag~~~~~---~~--~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      ||.....   ..  ...+..             +.+++.+++.+.++||++||...+....            ....|+.
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~  142 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG------------GGAAYTA  142 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------CCcccHH
Confidence            9964211   11  111110             4555555566667999999986543211            1345889


Q ss_pred             HHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHHHHhcCCC--CC
Q 022495          205 AKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALLHPE--SS  269 (296)
Q Consensus       205 sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~  269 (296)
                      +|.+.+.+.+       ..++++++|+||.+.++.....+...      ........+..++|+|++++.++.+..  ..
T Consensus       143 sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  222 (235)
T PRK06550        143 SKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQ  222 (235)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCC
Confidence            9999887664       24899999999999887532221100      001112336789999999998886532  23


Q ss_pred             CCeEEE
Q 022495          270 YKVVEI  275 (296)
Q Consensus       270 ~~~~~i  275 (296)
                      +.++.+
T Consensus       223 g~~~~~  228 (235)
T PRK06550        223 GTIVPI  228 (235)
T ss_pred             CcEEEE
Confidence            444444

>PRK08643 acetoin reductase; Validated

Probab=99.85  E-value=7.4e-20  Score=155.95  Aligned_cols=197  Identities=20%  Similarity=0.182  Sum_probs=131.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+...+..   .....++.++++|++| .+.+.++++.      ++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999876544322   1123568889999999 7777665542      49


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |+||||||........    ..+..             +.+++.+++.+ .++||++||...+....            .
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~  148 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP------------E  148 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC------------C
Confidence            9999999864322110    11110             44555665544 36899999986432211            1


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-----------ee--c--ccCccccCCcCHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----------IM--E--TEDTLYEGTISRDQVA  256 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-----------~~--~--~~~~~~~~~i~~~Dva  256 (296)
                      ...|+.+|++.+.+.+       ..|++++.|+||++.++......           ..  .  ........+.+++|+|
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  228 (256)
T PRK08643        149 LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVA  228 (256)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHH
Confidence            4569999999887664       35899999999999886422100           00  0  0000112357899999


Q ss_pred             HHHHHHhcCCC--CCCCeEEE
Q 022495          257 EVAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       257 ~~i~~~l~~~~--~~~~~~~i  275 (296)
                      +++..++....  ..|..+.+
T Consensus       229 ~~~~~L~~~~~~~~~G~~i~v  249 (256)
T PRK08643        229 NCVSFLAGPDSDYITGQTIIV  249 (256)
T ss_pred             HHHHHHhCccccCccCcEEEe
Confidence            99888876432  34444444

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-19  Score=154.00  Aligned_cols=182  Identities=20%  Similarity=0.256  Sum_probs=130.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---C--CCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +|+++||||+|+||++++++|+++|++|++++|++++.++...   .  ...++.++.+|++| .+++.++++.      
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999999999876554321   1  13468999999999 7776655542      


Q ss_pred             CCCEEEEcCCCCCCCCC----cchh------HH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPW------KA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~------~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|++|||||+......    ...+      +.       +.+++.+++.+.++||++||........           .
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~  149 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP-----------G  149 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC-----------C
Confidence            39999999997543211    1111      01       4555666677778999999976432211           1


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      +...|+.+|.+.+.+.+       ..++++++++||++.++.....-     .  ....++.+|.|+.++..++..
T Consensus       150 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-----~--~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        150 VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK-----S--TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc-----c--CCccCCHHHHHHHHHHHHhcC
Confidence            24569999999887664       24799999999999886432211     0  123588999999999999754

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=153.16  Aligned_cols=181  Identities=18%  Similarity=0.173  Sum_probs=128.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC---CCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~d~vv~~  142 (296)
                      +++++||||+|+||++++++|+++|++|++++|++++..++.. ...++.++.+|++| .+++.+++++   .+|.+|||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~d~~i~~   78 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT-QSANIFTLAFDVTD-HPGTKAALSQLPFIPELWIFN   78 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-hcCCCeEEEeeCCC-HHHHHHHHHhcccCCCEEEEc
Confidence            3689999999999999999999999999999999876655432 23468899999999 8888887765   36899999


Q ss_pred             CCCCCCCCC--cc--hh----HH-----HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHH
Q 022495          143 TGFQPGWDL--FA--PW----KA-----INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKL  207 (296)
Q Consensus       143 ag~~~~~~~--~~--~~----~~-----~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~  207 (296)
                      ||.....+.  ..  .+    ..     .++++++...  +.+++|++||......            ......|+.+|+
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~Y~asK~  146 (240)
T PRK06101         79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA------------LPRAEAYGASKA  146 (240)
T ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC------------CCCCchhhHHHH
Confidence            985322111  01  00    01     4555555432  2358999998753211            112446999999


Q ss_pred             HHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          208 QAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       208 ~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      +++.+.+       ..++++++++||.++++......      ......++++|+|+.++..++..
T Consensus       147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~------~~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT------FAMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC------CCCCcccCHHHHHHHHHHHHhcC
Confidence            9998764       46899999999999987533211      00112478999999999999874

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9.5e-20  Score=155.94  Aligned_cols=190  Identities=16%  Similarity=0.177  Sum_probs=131.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC-----C
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD-----D  135 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~-----~  135 (296)
                      .+++++++||||+|+||.+++++|+++|++|++++|+++...+...  ....++.++.+|++| .+.+.++++.     +
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~   80 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGG   80 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCC
Confidence            3467899999999999999999999999999999999776554321  123578999999999 7776665432     3


Q ss_pred             CCEEEEcCCCCCCCCC--c--chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL--F--APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~--~--~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......  .  ....    .         +.+++.+.+.+.+++|++||...+...            ..
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~  148 (263)
T PRK09072         81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY------------PG  148 (263)
T ss_pred             CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC------------CC
Confidence            8999999996432110  0  1100    0         455555666666789999997543221            11


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ...|+.+|.+.+.+++       ..+++++.+.||.+.++....... ...........+++|+|+.++.+++..
T Consensus       149 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        149 YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ-ALNRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc-cccccccCCCCCHHHHHHHHHHHHhCC
Confidence            3569999998876653       357999999999998764322110 001111124678999999999999865

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.2e-19  Score=154.53  Aligned_cols=199  Identities=15%  Similarity=0.109  Sum_probs=130.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhh---cccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      .|+++||||+|+||+++++.|+++|++|++++|+... ..+   .+.....++.++++|++| .+++.++++.      +
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999987432 111   111123568999999999 7776665542      4


Q ss_pred             CCEEEEcCCCCCCCC----C--cchhH----H-----HHH----HHHHHHcC------CCEEEEEccceeccCccCccCC
Q 022495          136 SEAVVCATGFQPGWD----L--FAPWK----A-----INL----VEACRKRG------VNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~----~--~~~~~----~-----~~~----l~~~~~~~------~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                      +|+||||||......    .  ...+.    .     .++    ++.+++..      .++||++||...+....     
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  155 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP-----  155 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC-----
Confidence            999999998642210    0  01111    0     333    44444332      46799999987543221     


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---e--ecccCccccCCcCHHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---I--METEDTLYEGTISRDQVAEV  258 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~--~~~~~~~~~~~i~~~Dva~~  258 (296)
                             +.+.|+.+|++.+.+++       .+++++++|+||.+.++......   .  ..........+.+++|++++
T Consensus       156 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  228 (256)
T PRK12745        156 -------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARA  228 (256)
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHH
Confidence                   23569999999987664       36899999999999886432210   0  00001111246789999999


Q ss_pred             HHHHhcCCC--CCCCeEEEEe
Q 022495          259 AVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +..++....  ..+..+++.+
T Consensus       229 i~~l~~~~~~~~~G~~~~i~g  249 (256)
T PRK12745        229 VAALASGDLPYSTGQAIHVDG  249 (256)
T ss_pred             HHHHhCCcccccCCCEEEECC
Confidence            888775432  3466777765

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.1e-19  Score=154.55  Aligned_cols=200  Identities=16%  Similarity=0.168  Sum_probs=132.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-------C
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-------D  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-------~  135 (296)
                      +++|+++||||+|+||+++++.|+++|++|++..++ .+...........++.++++|++| .+.+.+++++       +
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCC
Confidence            457899999999999999999999999999887654 333332222122468899999999 7877776653       2


Q ss_pred             CCEEEEcCCCCCCC--------CCc--chh----HH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          136 SEAVVCATGFQPGW--------DLF--APW----KA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       136 ~d~vv~~ag~~~~~--------~~~--~~~----~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                      +|++|||||.....        ...  ..+    ..         +.+++.+.+.+.++||++||.....          
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------  151 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN----------  151 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----------
Confidence            99999999863210        000  000    00         5555555566667999999964321          


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce---ee--cccCccccCCcCHHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI---IM--ETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~---~~--~~~~~~~~~~i~~~Dva~~i~  260 (296)
                        +..++..|+.+|.+.+.+++.       .+++++.|+||++.++......   ..  .........+.+++|+|++++
T Consensus       152 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  229 (253)
T PRK08642        152 --PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVL  229 (253)
T ss_pred             --CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence              122355799999999988753       4799999999999875322110   00  000111134789999999999


Q ss_pred             HHhcCCC--CCCCeEEEE
Q 022495          261 EALLHPE--SSYKVVEII  276 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~  276 (296)
                      .++..+.  ..|..+.+.
T Consensus       230 ~l~~~~~~~~~G~~~~vd  247 (253)
T PRK08642        230 FFASPWARAVTGQNLVVD  247 (253)
T ss_pred             HHcCchhcCccCCEEEeC
Confidence            8887532  344555443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.85  E-value=4.5e-20  Score=177.52  Aligned_cols=202  Identities=15%  Similarity=0.118  Sum_probs=140.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~a  143 (296)
                      ..|+||||||+||||++|++.|.++|++|..                     ..+|++| .+.+.+.+.. ++|+|||||
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~---------------------~~~~l~d-~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY---------------------GKGRLED-RSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe---------------------ecccccc-HHHHHHHHHhhCCCEEEECC
Confidence            4579999999999999999999999988731                     1246788 7778877764 599999999


Q ss_pred             CCCCCC--C-----CcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCc------cCccCChhhhhhhhhHHHHHH
Q 022495          144 GFQPGW--D-----LFAPWKA-----INLVEACRKRGVNRFILISSILVNGAA------MGQILNPAYIFLNVFGLTLIA  205 (296)
Q Consensus       144 g~~~~~--~-----~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~------~~~~~~~~~~~~~~~~~y~~s  205 (296)
                      +.....  +     .......     .+++++|++.++ ++|++||.++|+..      .+.+..++..+..+.+.|+.+
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s  515 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT  515 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence            865321  1     1111111     999999999998 57778888887632      122344444443445789999


Q ss_pred             HHHHHHHHHHhCCcEEEEecCcccCCCCC--Ccee----ecc-cCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeC
Q 022495          206 KLQAEQYIRKSGINYTIIRPGGLRNEPPT--GNII----MET-EDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR  278 (296)
Q Consensus       206 K~~~e~~~~~~~~~~~~lrp~~i~g~~~~--~~~~----~~~-~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~  278 (296)
                      |.++|.+++.+ -++.++|+.++|+....  ..++    ... ......+...++|++.+++.++...  .+.+||+++ 
T Consensus       516 K~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~~--~~giyni~~-  591 (668)
T PLN02260        516 KAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--LRGIWNFTN-  591 (668)
T ss_pred             HHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHhC--CCceEEecC-
Confidence            99999999776 36777788777753311  1111    001 0111234677888888878887643  246999999 


Q ss_pred             CCCCCCCHHHHHHHhhc
Q 022495          279 VDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       279 ~~~~~~~~~el~~~i~~  295 (296)
                        +..+++.|++++|.+
T Consensus       592 --~~~~s~~e~a~~i~~  606 (668)
T PLN02260        592 --PGVVSHNEILEMYKD  606 (668)
T ss_pred             --CCcCcHHHHHHHHHH
Confidence              678999999998865

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.85  E-value=1.1e-19  Score=154.73  Aligned_cols=192  Identities=15%  Similarity=0.091  Sum_probs=130.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++++|+++||||+|+||++++++|+++|++|+++++.... ..+.+.....++.++++|++| .+++.++++.      
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFG   84 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            35678999999999999999999999999999988775422 111121123468889999999 7777766642      


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      ++|++|||||........    ..+..             +.+++.+++.+ -+++|++||...+.....          
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  154 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR----------  154 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC----------
Confidence            499999999974322110    11111             55566666554 368999999876643211          


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-----cCc-cccCCcCHHHHHHHHHHHh
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----EDT-LYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-----~~~-~~~~~i~~~Dva~~i~~~l  263 (296)
                        ...|+.+|++.+.+.+       +.|++++.|+||++.++..........     ... ....+..++|+|+.++.++
T Consensus       155 --~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~  232 (253)
T PRK08993        155 --VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLA  232 (253)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence              3469999999987664       358999999999998875321100000     000 1123678999999999888


Q ss_pred             cCC
Q 022495          264 LHP  266 (296)
Q Consensus       264 ~~~  266 (296)
                      ...
T Consensus       233 s~~  235 (253)
T PRK08993        233 SSA  235 (253)
T ss_pred             Ccc
Confidence            754

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=8.1e-20  Score=155.41  Aligned_cols=189  Identities=17%  Similarity=0.182  Sum_probs=126.4

Q ss_pred             cCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .+++|+++||||+  ++||++++++|+++|++|++.+|+..............+.++++|++| .+++.++++.      
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVG   82 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhC
Confidence            3568999999999  799999999999999999999987422211111122467899999999 7766654432      


Q ss_pred             CCCEEEEcCCCCCCC-------C-CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 DSEAVVCATGFQPGW-------D-LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~-------~-~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                      ++|++|||||.....       + ..+.+..             +.+++.+++ + ++||++||......          
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-~-g~Iv~iss~~~~~~----------  150 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-G-ASIVTLTYFGSERA----------  150 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-C-ceEEEEeccCcccc----------
Confidence            499999999964320       0 0111111             555565544 2 68999999753211          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce----eecc-cCc-cccCCcCHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI----IMET-EDT-LYEGTISRDQVAEVAV  260 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~----~~~~-~~~-~~~~~i~~~Dva~~i~  260 (296)
                        ...+..|+.+|++.+.+.+       ..|++++.|.||.+.++......    .... ... ....+..++|+|+++.
T Consensus       151 --~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~  228 (252)
T PRK06079        151 --IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAA  228 (252)
T ss_pred             --CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHH
Confidence              1225679999999998764       36899999999999886422110    0000 000 1123678999999998


Q ss_pred             HHhcCC
Q 022495          261 EALLHP  266 (296)
Q Consensus       261 ~~l~~~  266 (296)
                      .++...
T Consensus       229 ~l~s~~  234 (252)
T PRK06079        229 FLLSDL  234 (252)
T ss_pred             HHhCcc
Confidence            888653

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=154.29  Aligned_cols=192  Identities=19%  Similarity=0.221  Sum_probs=131.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      .++++|+++||||+|+||+++++.|+++|++|++++|++++.++...   ....++.++.+|++| .+.+.++++.    
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   83 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETE   83 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999999876554321   123568899999999 7777776542    


Q ss_pred             --CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcC--------CCEEEEEccceeccCccCc
Q 022495          135 --DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRG--------VNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~--------~~~iV~~SS~~~~~~~~~~  187 (296)
                        ++|++|||+|.......    ...+..             +.+++.+.+..        .+++|++||...+...   
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---  160 (258)
T PRK06949         84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL---  160 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC---
Confidence              49999999996432111    011111             33445554443        3599999998654321   


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeec---ccCc--cccCCcCHHHH
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME---TEDT--LYEGTISRDQV  255 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~---~~~~--~~~~~i~~~Dv  255 (296)
                               .....|+.+|.+.+.+++.       .++++++|+||.++++.........   ....  ....+..++|+
T Consensus       161 ---------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  231 (258)
T PRK06949        161 ---------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDL  231 (258)
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHH
Confidence                     1245689999998876642       5899999999999987533211000   0000  11235678999


Q ss_pred             HHHHHHHhcCC
Q 022495          256 AEVAVEALLHP  266 (296)
Q Consensus       256 a~~i~~~l~~~  266 (296)
                      ++++..++...
T Consensus       232 ~~~~~~l~~~~  242 (258)
T PRK06949        232 DGLLLLLAADE  242 (258)
T ss_pred             HHHHHHHhChh
Confidence            99988887643

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.85  E-value=2e-19  Score=152.02  Aligned_cols=199  Identities=19%  Similarity=0.200  Sum_probs=135.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      .|+++||||+|+||+++++.|+++|++|++++|+... ..+.   ......++.++.+|++| .+.+.+++++      +
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD-TEECAEALAEIEEEEGP   80 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999999998532 1111   11123468999999999 7777666542      4


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||+|.......    .+.+..             +.+++.+++.+.++||++||...+....            .
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~------------~  148 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF------------G  148 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC------------C
Confidence            9999999996532111    111110             5567777777778999999987654321            2


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--e--cccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--M--ETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--~--~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ...|+.+|.+.+.+++       +.++++++++||++.++.......  .  .........+..++|+++++..++....
T Consensus       149 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  228 (245)
T PRK12824        149 QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAA  228 (245)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            3468999998887654       358999999999998864321100  0  0001112235688999999888775432


Q ss_pred             --CCCCeEEEEe
Q 022495          268 --SSYKVVEIIS  277 (296)
Q Consensus       268 --~~~~~~~i~~  277 (296)
                        ..+.++++.+
T Consensus       229 ~~~~G~~~~~~~  240 (245)
T PRK12824        229 GFITGETISING  240 (245)
T ss_pred             cCccCcEEEECC
Confidence              3466666655

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.85  E-value=7.4e-20  Score=156.37  Aligned_cols=201  Identities=13%  Similarity=0.118  Sum_probs=132.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhcc---c-CCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTL---S-KDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~---~-~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      .++++|+++||||+++||+++++.|+++|++|+++.|+ .+......   . ....++.++.+|++| .+++.+++..  
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~   82 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKID   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHH
Confidence            35678999999999999999999999999999988654 33332211   1 123468899999999 7777665543  


Q ss_pred             ----CCCEEEEcCCCCCC-----CCC---cchhHH---------------HHHHHHHHHcCCCEEEEEccceeccCccCc
Q 022495          135 ----DSEAVVCATGFQPG-----WDL---FAPWKA---------------INLVEACRKRGVNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~-----~~~---~~~~~~---------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~  187 (296)
                          ++|++|||||....     ...   ......               +.+++.+++.+.++||++||...+..    
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  158 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY----  158 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC----
Confidence                49999999985321     010   001110               55666677666679999999753211    


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHH
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQ  254 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~D  254 (296)
                              ...+..|+.+|++++.+.+       ..|++++.|.||.+.++..........      .......+..++|
T Consensus       159 --------~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~  230 (260)
T PRK08416        159 --------IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPED  230 (260)
T ss_pred             --------CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHH
Confidence                    1124569999999998764       258999999999998864221100000      0001123678999


Q ss_pred             HHHHHHHHhcCCC--CCCCeEEE
Q 022495          255 VAEVAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       255 va~~i~~~l~~~~--~~~~~~~i  275 (296)
                      +|++++.++....  ..+..+.+
T Consensus       231 va~~~~~l~~~~~~~~~G~~i~v  253 (260)
T PRK08416        231 LAGACLFLCSEKASWLTGQTIVV  253 (260)
T ss_pred             HHHHHHHHcChhhhcccCcEEEE
Confidence            9999988876432  24444444

>PRK08324 short chain dehydrogenase; Validated

Probab=99.85  E-value=9.2e-20  Score=175.20  Aligned_cols=202  Identities=22%  Similarity=0.290  Sum_probs=140.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+.+........  ...++.++.+|++| .+.+.++++.      
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFG  497 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999999998765433211  11478899999999 7777766541      


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhH------H-------HHHHHHHHHcCC-CEEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWK------A-------INLVEACRKRGV-NRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~------~-------~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      ++|+||||||........    ..+.      .       +.+++.+++.+. ++||++||..++...            
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~------------  565 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG------------  565 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC------------
Confidence            399999999965432111    1111      0       555666677664 799999998654321            


Q ss_pred             hhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCccc-CCC-CCCcee--------ec--------ccCccccCCcC
Q 022495          197 NVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLR-NEP-PTGNII--------ME--------TEDTLYEGTIS  251 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~-g~~-~~~~~~--------~~--------~~~~~~~~~i~  251 (296)
                      .....|+.+|++.+.+++.       .++++++|+|+.++ +.. ..+.+.        ..        ........+++
T Consensus       566 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~  645 (681)
T PRK08324        566 PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVT  645 (681)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccC
Confidence            1246799999999987753       47999999999996 322 111110        00        01112235799


Q ss_pred             HHHHHHHHHHHhc--CCCCCCCeEEEEe
Q 022495          252 RDQVAEVAVEALL--HPESSYKVVEIIS  277 (296)
Q Consensus       252 ~~Dva~~i~~~l~--~~~~~~~~~~i~~  277 (296)
                      ++|+|++++.++.  .....+.++++.+
T Consensus       646 ~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        646 PEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             HHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            9999999998884  3444567787765

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.85  E-value=7.1e-20  Score=189.41  Aligned_cols=226  Identities=23%  Similarity=0.301  Sum_probs=158.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC----CeEEEEEcCcchhhhc--c-----------cCCCCCeEEEEcccCCC----
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG----FAVKAGVRDLDKAKTT--L-----------SKDNPSLQIVKADVTEG----  124 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~--~-----------~~~~~~~~~~~~D~~d~----  124 (296)
                      .++|+||||+||||+++++.|+++|    ++|+++.|........  +           .....+++++.+|+.++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5799999999999999999999887    7899999985432211  0           00124789999999852    


Q ss_pred             -hHHHHHHhcCCCCEEEEcCCCCCCCCCcch---hHH---HHHHHHHHHcCCCEEEEEccceeccCccC-----------
Q 022495          125 -SAKLSEAIGDDSEAVVCATGFQPGWDLFAP---WKA---INLVEACRKRGVNRFILISSILVNGAAMG-----------  186 (296)
Q Consensus       125 -~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~---~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~-----------  186 (296)
                       .+.+.++..+ +|+|||||+..........   .++   .+++++|++.++++|+|+||.++|+....           
T Consensus      1051 ~~~~~~~l~~~-~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443      1051 SDEKWSDLTNE-VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred             CHHHHHHHHhc-CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence             3456666677 9999999986543222211   122   89999999988899999999999864210           


Q ss_pred             -ccCChhh----hhhhhhHHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCCCcee--------------e--ccc
Q 022495          187 -QILNPAY----IFLNVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTGNII--------------M--ETE  242 (296)
Q Consensus       187 -~~~~~~~----~~~~~~~~y~~sK~~~e~~~~~---~~~~~~~lrp~~i~g~~~~~~~~--------------~--~~~  242 (296)
                       ....+..    ....+...|+.+|+.+|.++.+   .|++++++|||.|+|+...+...              .  .+.
T Consensus      1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 1209 (1389)
T TIGR03443      1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPN 1209 (1389)
T ss_pred             CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCC
Confidence             0011110    0112345699999999998854   58999999999999975443210              0  011


Q ss_pred             CccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          243 DTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       243 ~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ......+++++|++++++.++..+.  ..+.+||+.+   +..+++.++++.+.+
T Consensus      1210 ~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~l~~ 1261 (1389)
T TIGR03443      1210 INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTG---HPRIRFNDFLGTLKT 1261 (1389)
T ss_pred             CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCC---CCCCcHHHHHHHHHH
Confidence            1122468999999999999987653  2345788877   678999999998753

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.9e-19  Score=152.39  Aligned_cols=201  Identities=19%  Similarity=0.169  Sum_probs=135.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhc-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      .+++++++||||+|+||.++++.|+++|++|+++ .|++++..+..   .....++.++.+|++| .+.+.++++     
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   80 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999998 88876543322   1123568899999999 787776664     


Q ss_pred             --CCCCEEEEcCCCCCCCC----CcchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          134 --DDSEAVVCATGFQPGWD----LFAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       134 --~~~d~vv~~ag~~~~~~----~~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        + +|+|||++|......    ....+.    .         +.+++.+.+.+.+++|++||...+....         
T Consensus        81 ~~~-id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---------  150 (247)
T PRK05565         81 FGK-IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---------  150 (247)
T ss_pred             hCC-CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC---------
Confidence              5 999999999653211    001100    0         4455556666677899999986543211         


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--e-c-ccCccccCCcCHHHHHHHHHHHh
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--M-E-TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--~-~-~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                         ....|+.+|.+.+.+++       ..++++++++||.+.++.......  . . ........+..++|++++++.++
T Consensus       151 ---~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (247)
T PRK05565        151 ---CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLA  227 (247)
T ss_pred             ---CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence               13458899988776653       358999999999997754322110  0 0 00011133578999999999998


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..++.+++.+
T Consensus       228 ~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        228 SDDASYITGQIITVDG  243 (247)
T ss_pred             CCccCCccCcEEEecC
Confidence            7643  3455555544

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.5e-19  Score=154.70  Aligned_cols=202  Identities=19%  Similarity=0.137  Sum_probs=134.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++++++||||+|+||.+++++|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.     
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   85 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAF   85 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999876554322   1123568899999999 7877765542     


Q ss_pred             -CCCEEEEcCCCCCCCCCc----chhHH---------HHHHHH----HHH-cCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF----APWKA---------INLVEA----CRK-RGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~----~~~~~---------~~~l~~----~~~-~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||........    ..+..         .+++++    +.+ .+.++||++||...+..            
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------  153 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA------------  153 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC------------
Confidence             399999999863321111    11110         344444    433 45679999999754321            


Q ss_pred             hhhhHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCC-----ceeec-ccCccccCCcCHHHHHHHHHHHh
Q 022495          196 LNVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTG-----NIIME-TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~-----~~~~~-~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      ..+...|+.+|++++.+++.      .+++++.|+||.+.++....     .+... ...........++|+|++++.++
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (263)
T PRK07814        154 GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLA  233 (263)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            12245699999999987752      35899999999998764221     00000 00011123568899999999988


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..+..+.+.+
T Consensus       234 ~~~~~~~~g~~~~~~~  249 (263)
T PRK07814        234 SPAGSYLTGKTLEVDG  249 (263)
T ss_pred             CccccCcCCCEEEECC
Confidence            6532  3455555543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=2.2e-19  Score=153.11  Aligned_cols=202  Identities=13%  Similarity=0.081  Sum_probs=131.0

Q ss_pred             cCCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcc-----------hh---hhcccCCCCCeEEEEcccCCChH
Q 022495           63 SVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLD-----------KA---KTTLSKDNPSLQIVKADVTEGSA  126 (296)
Q Consensus        63 ~~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~-----------~~---~~~~~~~~~~~~~~~~D~~d~~~  126 (296)
                      ++++++|+||||+|  +||.+++++|+++|++|++++|++.           ..   .........++.++.+|++| .+
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~   80 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQ-PY   80 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCC-HH
Confidence            35678999999995  8999999999999999999998721           11   11111123468999999999 77


Q ss_pred             HHHHHhcC------CCCEEEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccC
Q 022495          127 KLSEAIGD------DSEAVVCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGA  183 (296)
Q Consensus       127 ~~~~~~~~------~~d~vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~  183 (296)
                      ++.++++.      ++|+||||||........    ..+.    .         +.+++.+.+.+.++||++||...+..
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~  160 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP  160 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence            76655432      489999999864321111    1111    1         33334444445579999999876543


Q ss_pred             ccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeeccc-CccccCCcCHHHH
Q 022495          184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE-DTLYEGTISRDQV  255 (296)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~-~~~~~~~i~~~Dv  255 (296)
                      .            .....|+.+|++++.+++       ..+++++.|+||.+.++........... ......+..++|+
T Consensus       161 ~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (256)
T PRK12748        161 M------------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVDA  228 (256)
T ss_pred             C------------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHHH
Confidence            2            124569999999998764       2589999999999887643221100000 0011235678999


Q ss_pred             HHHHHHHhcCCC--CCCCeEEEEe
Q 022495          256 AEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       256 a~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |+.+..++....  ..+.++++.+
T Consensus       229 a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        229 ARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             HHHHHHHhCcccccccCCEEEecC
Confidence            999887776532  2356666643

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.3e-20  Score=154.80  Aligned_cols=188  Identities=17%  Similarity=0.176  Sum_probs=129.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--------C--C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--------D--D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--------~--~  135 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+..+..  ......++.++++|++| .+++.+++.        .  +
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AAAAGERLAEVELDLSD-AAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hhccCCeEEEEEeccCC-HHHHHHHHHHHHHHHhccCCC
Confidence            358999999999999999999999999999999865422  11123568899999999 777766331        1  4


Q ss_pred             CCEEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          136 SEAVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      +|++|||||........     +.+..             +.+++.+.+.+.++||++||...+..            ..
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~  145 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA------------YA  145 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC------------CC
Confidence            89999999864321110     11110             56667777666779999999875532            22


Q ss_pred             hhHHHHHHHHHHHHHHH------HhCCcEEEEecCcccCCCCCC----cee-eccc-----CccccCCcCHHHHHHHHHH
Q 022495          198 VFGLTLIAKLQAEQYIR------KSGINYTIIRPGGLRNEPPTG----NII-METE-----DTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~------~~~~~~~~lrp~~i~g~~~~~----~~~-~~~~-----~~~~~~~i~~~Dva~~i~~  261 (296)
                      ++..|+.+|.+.+.+++      ..+++++.|+||.+.++....    ... ....     .......+.++|+|+.++.
T Consensus       146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  225 (243)
T PRK07023        146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIA  225 (243)
T ss_pred             CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHH
Confidence            35679999999998876      248999999999997753110    000 0000     0001236789999998888


Q ss_pred             HhcCCCC
Q 022495          262 ALLHPES  268 (296)
Q Consensus       262 ~l~~~~~  268 (296)
                      .+..+..
T Consensus       226 ~l~~~~~  232 (243)
T PRK07023        226 YLLSDDF  232 (243)
T ss_pred             HHhcccc
Confidence            8877653

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.3e-19  Score=152.57  Aligned_cols=197  Identities=17%  Similarity=0.177  Sum_probs=127.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEE-cCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhc-------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV-RDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIG-------  133 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~-------  133 (296)
                      ++|+++||||+|+||+++++.|+++|++|++.. |+.+...+.   +......+..+.+|++| .+.+...+.       
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES-LHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC-HHHHHHHHHHHHHHhh
Confidence            578999999999999999999999999998875 444433321   11123457788999998 655443221       


Q ss_pred             ---C--CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          134 ---D--DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       134 ---~--~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                         +  ++|+||||||........    +.+..             +.+++.+++.  ++||++||...+...       
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~-------  152 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISL-------  152 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCC-------
Confidence               1  399999999964321111    11111             4455555443  599999999765322       


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---ecc---cCccccCCcCHHHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---MET---EDTLYEGTISRDQVAEV  258 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~~~---~~~~~~~~i~~~Dva~~  258 (296)
                           .....|+.+|++++.+++       ..++++++|.||++.++.......   ...   .......+.+++|+|++
T Consensus       153 -----~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  227 (252)
T PRK12747        153 -----PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADT  227 (252)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHH
Confidence                 124569999999997764       358999999999998875322110   000   00012346789999999


Q ss_pred             HHHHhcCCC--CCCCeEEEE
Q 022495          259 AVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~  276 (296)
                      +..++....  ..+..+.+.
T Consensus       228 ~~~l~s~~~~~~~G~~i~vd  247 (252)
T PRK12747        228 AAFLASPDSRWVTGQLIDVS  247 (252)
T ss_pred             HHHHcCccccCcCCcEEEec
Confidence            888775432  234455443

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.6e-19  Score=154.19  Aligned_cols=185  Identities=14%  Similarity=0.222  Sum_probs=127.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~v  139 (296)
                      +|+++||||+|+||+++++.|+++|++|++++|+.++..+...   .++.++.+|++| .+.+.++++.      ++|+|
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~v   76 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA---AGFTAVQLDVND-GAALARLAEELEAEHGGLDVL   76 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEE
Confidence            3789999999999999999999999999999999876654432   357889999999 7777665532      49999


Q ss_pred             EEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          140 VCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       140 v~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |||||........    +.+.    .         +.+++.+++. .+++|++||...+...            .....|
T Consensus        77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~------------~~~~~Y  143 (274)
T PRK05693         77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVT------------PFAGAY  143 (274)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCC------------CCccHH
Confidence            9999964322111    1111    0         4555555443 4689999997653321            123569


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-----ecccCcc--------------ccCCcCHHHHH
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----METEDTL--------------YEGTISRDQVA  256 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-----~~~~~~~--------------~~~~i~~~Dva  256 (296)
                      +.+|.+.+.+.+       ..|+++++++||.+.++.......     .......              ......++|+|
T Consensus       144 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  223 (274)
T PRK05693        144 CASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFA  223 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHH
Confidence            999999887653       368999999999998864332110     0000000              01246789999


Q ss_pred             HHHHHHhcCCC
Q 022495          257 EVAVEALLHPE  267 (296)
Q Consensus       257 ~~i~~~l~~~~  267 (296)
                      +.++.++..+.
T Consensus       224 ~~i~~~~~~~~  234 (274)
T PRK05693        224 RQLLAAVQQSP  234 (274)
T ss_pred             HHHHHHHhCCC
Confidence            99999998654

>PRK08017 oxidoreductase; Provisional

Probab=99.84  E-value=2.6e-19  Score=152.47  Aligned_cols=187  Identities=19%  Similarity=0.216  Sum_probs=131.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-------CCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-------DSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-------~~d~  138 (296)
                      .++|+||||+|+||.++++.|+++|++|++++|++++.+....   .+++++.+|++| .+.+.++++.       ++|.
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS---LGFTGILLDLDD-PESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh---CCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeE
Confidence            3689999999999999999999999999999999876654332   357889999999 7766554422       3799


Q ss_pred             EEEcCCCCCCCC----CcchhH-H------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWD----LFAPWK-A------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~----~~~~~~-~------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      +||++|......    ..+.+. .            +.+++.+++.+.+++|++||...+...            .....
T Consensus        78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------~~~~~  145 (256)
T PRK08017         78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST------------PGRGA  145 (256)
T ss_pred             EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC------------CCccH
Confidence            999998643211    101110 0            456788888888899999997543221            12456


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----c--ccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----E--TEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~--~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      |+.+|.+.|.+.+       ..++++++++||.+.++........    .  ........+++++|+++++..++..+..
T Consensus       146 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        146 YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence            9999999997653       4689999999998877532211000    0  0000112469999999999999987653

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=2e-19  Score=153.57  Aligned_cols=207  Identities=17%  Similarity=0.184  Sum_probs=136.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|+.++.+...   .....++.++.+|++| .+.+.+++..    
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~   86 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLER   86 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999876544322   1133567889999999 7777655432    


Q ss_pred             --CCCEEEEcCCCCCCCC----CcchhH----H-----HHHHHHHH-----HcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGWD----LFAPWK----A-----INLVEACR-----KRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~----~~~~~~----~-----~~~l~~~~-----~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|+||||||......    ....+.    .     .++++++.     +.+.++||++||...+....+.       
T Consensus        87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------  159 (259)
T PRK08213         87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------  159 (259)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------
Confidence              4999999998642211    111111    0     44555443     3456799999998655432211       


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee--e-cc-cCccccCCcCHHHHHHHHHHHh
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII--M-ET-EDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~--~-~~-~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                       ..+...|+.+|++.+.+++.       .++++++++||.+.++...+...  . .. .......+...+|+|+.+..++
T Consensus       160 -~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  238 (259)
T PRK08213        160 -VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLA  238 (259)
T ss_pred             -ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence             12246799999999987752       48999999999998764322110  0 00 0011123457899999988777


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..|..+.+.+
T Consensus       239 ~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        239 SDASKHITGQILAVDG  254 (259)
T ss_pred             CccccCccCCEEEECC
Confidence            5432  3456665544

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.1e-19  Score=154.27  Aligned_cols=195  Identities=15%  Similarity=0.151  Sum_probs=130.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--------CC-
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--------DS-  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--------~~-  136 (296)
                      |+++||||+|+||++++++|+++|++|++++|++ +...++......++.++.+|++| .+.+.++++.        .. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQD-VHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCC-HHHHHHHHHHHHHhcCcccCC
Confidence            6899999999999999999999999999999987 33333322234578899999999 7877776643        01 


Q ss_pred             -CEEEEcCCCCCCCC---Cc--chhH-------------HHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhh
Q 022495          137 -EAVVCATGFQPGWD---LF--APWK-------------AINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       137 -d~vv~~ag~~~~~~---~~--~~~~-------------~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       +++|||||......   ..  ..+.             .+.+++.+++.+ .++||++||..++..            .
T Consensus        81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~  148 (251)
T PRK06924         81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP------------Y  148 (251)
T ss_pred             ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC------------C
Confidence             27899998643211   10  0010             166677776643 568999999764321            2


Q ss_pred             hhhHHHHHHHHHHHHHHH---------HhCCcEEEEecCcccCCCCCC-----ceeecccC-----ccccCCcCHHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTG-----NIIMETED-----TLYEGTISRDQVAE  257 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~---------~~~~~~~~lrp~~i~g~~~~~-----~~~~~~~~-----~~~~~~i~~~Dva~  257 (296)
                      .+...|+.+|++.+.+.+         ..+++++.|+||++.++....     ........     .....+.+++|+|+
T Consensus       149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  228 (251)
T PRK06924        149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAK  228 (251)
T ss_pred             CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHH
Confidence            335679999999998764         137999999999998754211     00000000     01124689999999


Q ss_pred             HHHHHhcC-CCCCCCeEE
Q 022495          258 VAVEALLH-PESSYKVVE  274 (296)
Q Consensus       258 ~i~~~l~~-~~~~~~~~~  274 (296)
                      .++.++.. ....|+.+.
T Consensus       229 ~~~~l~~~~~~~~G~~~~  246 (251)
T PRK06924        229 ALRNLLETEDFPNGEVID  246 (251)
T ss_pred             HHHHHHhcccCCCCCEee
Confidence            99999986 333444443

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.84  E-value=2.3e-19  Score=153.80  Aligned_cols=185  Identities=18%  Similarity=0.160  Sum_probs=126.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|++....      ..++.++.+|++| .+.+.++++.      +
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   77 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------HENYQFVPTDVSS-AEEVNHTVAEIIEKFGR   77 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------cCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999999876532      2468899999999 7777665542      4


Q ss_pred             CCEEEEcCCCCCCCC-------------CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccC
Q 022495          136 SEAVVCATGFQPGWD-------------LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~-------------~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~  189 (296)
                      +|+||||||......             ..+.+..             +.+++.+++.+.++||++||...+....    
T Consensus        78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  153 (266)
T PRK06171         78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE----  153 (266)
T ss_pred             CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC----
Confidence            899999999642210             0011110             4555556666667999999987543221    


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCccc-CCCCCCce----e----------ecc-c---C
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLR-NEPPTGNI----I----------MET-E---D  243 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~-g~~~~~~~----~----------~~~-~---~  243 (296)
                              ....|+.+|.+.+.+++       ..++++++|+||.+. ++......    .          ... .   .
T Consensus       154 --------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (266)
T PRK06171        154 --------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTST  225 (266)
T ss_pred             --------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccc
Confidence                    24569999999987764       258999999999885 32211000    0          000 0   0


Q ss_pred             ccccCCcCHHHHHHHHHHHhcC
Q 022495          244 TLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       244 ~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .....+..++|+|+++..++..
T Consensus       226 ~p~~r~~~~~eva~~~~fl~s~  247 (266)
T PRK06171        226 IPLGRSGKLSEVADLVCYLLSD  247 (266)
T ss_pred             ccCCCCCCHHHhhhheeeeecc
Confidence            0112356789999998877754

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.3e-19  Score=153.50  Aligned_cols=191  Identities=14%  Similarity=0.161  Sum_probs=128.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh----------hcccCCCCCeEEEEcccCCChHHHHHHh
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK----------TTLSKDNPSLQIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~~~~~~~~~D~~d~~~~~~~~~  132 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.+...          +.+.....++.++.+|++| .+.+.+++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~   81 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAV   81 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHH
Confidence            356789999999999999999999999999999999764311          1111133568899999999 77777665


Q ss_pred             cC------CCCEEEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccC
Q 022495          133 GD------DSEAVVCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       133 ~~------~~d~vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~  189 (296)
                      +.      ++|+||||||........    ..+.    .         +.+++.+++.+.+++|++||.......     
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  156 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK-----  156 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc-----
Confidence            42      499999999964321111    1111    1         555555666655689999986422110     


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCc-ccCCCCCCceeecccCccccCCcCHHHHHHHHHH
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGG-LRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~-i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                           ...++..|+.+|++++.+++       ..+++++.|.||. +.++.... . . ........+..++|+|+.++.
T Consensus       157 -----~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~-~-~-~~~~~~~~~~~p~~va~~~~~  228 (273)
T PRK08278        157 -----WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN-L-L-GGDEAMRRSRTPEIMADAAYE  228 (273)
T ss_pred             -----ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh-c-c-cccccccccCCHHHHHHHHHH
Confidence                 01235679999999998775       2589999999994 55532111 1 1 111122346789999999999


Q ss_pred             HhcCCC
Q 022495          262 ALLHPE  267 (296)
Q Consensus       262 ~l~~~~  267 (296)
                      ++....
T Consensus       229 l~~~~~  234 (273)
T PRK08278        229 ILSRPA  234 (273)
T ss_pred             HhcCcc
Confidence            887643

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.2e-19  Score=152.32  Aligned_cols=201  Identities=16%  Similarity=0.207  Sum_probs=136.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHHHHHHhcC--CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD--DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~--~~  136 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++..+...    ....++.++.+|++| .+++.++++.  ++
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~g~i   82 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEAGDI   82 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHhCCC
Confidence            4568999999999999999999999999999999999776543221    123468899999999 7877776643  49


Q ss_pred             CEEEEcCCCCCCCCC--c--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL--F--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~--~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||+|.......  .  +.+..             +.+++.+++.+.+++|++||.....            +...+
T Consensus        83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~------------~~~~~  150 (259)
T PRK06125         83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN------------PDADY  150 (259)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC------------CCCCc
Confidence            999999996432111  1  11110             6677777777667999999875321            11235


Q ss_pred             HHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce------eeccc-------Cc-cccCCcCHHHHHHH
Q 022495          200 GLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI------IMETE-------DT-LYEGTISRDQVAEV  258 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~------~~~~~-------~~-~~~~~i~~~Dva~~  258 (296)
                      ..|+.+|.+.+.+.+.       .+++++.|.||.+.++.....+      .+...       .. ....+.+++|+|++
T Consensus       151 ~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  230 (259)
T PRK06125        151 ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADL  230 (259)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHH
Confidence            6688999999877652       5899999999999886311000      00000       00 11246789999999


Q ss_pred             HHHHhcCCC--CCCCeEEEE
Q 022495          259 AVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~  276 (296)
                      ++.++....  ..+..+.+.
T Consensus       231 ~~~l~~~~~~~~~G~~i~vd  250 (259)
T PRK06125        231 VAFLASPRSGYTSGTVVTVD  250 (259)
T ss_pred             HHHHcCchhccccCceEEec
Confidence            888876432  244444443

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=4.1e-19  Score=150.86  Aligned_cols=200  Identities=16%  Similarity=0.137  Sum_probs=137.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++++++||||+|+||..+++.|+++|++|++++|++.+..+..   .....++.++.+|++| .+++.++++.      
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999876544322   1124578889999999 7766554432      


Q ss_pred             CCCEEEEcCCCCCCCC-----------C--cchhHH-------------HHHHHHHHHc-CCCEEEEEccceeccCccCc
Q 022495          135 DSEAVVCATGFQPGWD-----------L--FAPWKA-------------INLVEACRKR-GVNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~-----------~--~~~~~~-------------~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~  187 (296)
                      ++|+||||||......           .  ...+..             +.+++.+.+. ..++||++||...|+..   
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---  158 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM---  158 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC---
Confidence            3899999999633210           0  001110             3455555554 33589999998665421   


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--ec--ccCccccCCcCHHHHH
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--ME--TEDTLYEGTISRDQVA  256 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--~~--~~~~~~~~~i~~~Dva  256 (296)
                                +...|+.+|++.+.+++       ..+++++.++||.+.++.......  ..  ........+.+++|+|
T Consensus       159 ----------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  228 (253)
T PRK08217        159 ----------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIA  228 (253)
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHH
Confidence                      24569999999987764       358999999999998865322100  00  0011112357899999


Q ss_pred             HHHHHHhcCCCCCCCeEEEEe
Q 022495          257 EVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       257 ~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      +++..++......+.++++.+
T Consensus       229 ~~~~~l~~~~~~~g~~~~~~g  249 (253)
T PRK08217        229 HTVRFIIENDYVTGRVLEIDG  249 (253)
T ss_pred             HHHHHHHcCCCcCCcEEEeCC
Confidence            999998876555677787765

>PRK12743 oxidoreductase; Provisional

Probab=99.84  E-value=3.1e-19  Score=152.14  Aligned_cols=199  Identities=14%  Similarity=0.135  Sum_probs=130.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhh---cccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++||||+|+||++++++|+++|++|+++.+.. +....   .+.....++.++.+|++| .+++.+++..      +
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999886643 33222   111134578999999999 7776655542      4


Q ss_pred             CCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhh
Q 022495          136 SEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      +|+||||+|........    +.+..             +.+++.+.+.+ .++||++||.....            +..
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~------------~~~  148 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT------------PLP  148 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC------------CCC
Confidence            99999999964321110    11100             34445554443 36999999975321            122


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc---eee-cccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN---IIM-ETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~---~~~-~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      +...|+.+|.+.+.+++       ..+++++.|+||.+.++.....   ... .........+.+++|+++++..++...
T Consensus       149 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  228 (256)
T PRK12743        149 GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEG  228 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            35679999999987764       3589999999999998753211   000 000111123568999999988888654


Q ss_pred             C--CCCCeEEEEe
Q 022495          267 E--SSYKVVEIIS  277 (296)
Q Consensus       267 ~--~~~~~~~i~~  277 (296)
                      .  ..+.++.+.+
T Consensus       229 ~~~~~G~~~~~dg  241 (256)
T PRK12743        229 ASYTTGQSLIVDG  241 (256)
T ss_pred             ccCcCCcEEEECC
Confidence            3  2455555543

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.2e-19  Score=153.00  Aligned_cols=197  Identities=16%  Similarity=0.179  Sum_probs=132.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      +++++|+||||+|+||.+++++|+++|++|++++|+..+.......  ....++++|++| .+.+.++++.      ++|
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~--~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADE--VGGLFVPTDVTD-EDAVNALFDTAAETYGSVD   81 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH--cCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCC
Confidence            5689999999999999999999999999999999987655433211  123688999999 8877776652      489


Q ss_pred             EEEEcCCCCCCC-CC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccce-eccCccCccCChhhhhhh
Q 022495          138 AVVCATGFQPGW-DL-----FAPWKA-------------INLVEACRKRGVNRFILISSIL-VNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       138 ~vv~~ag~~~~~-~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~-~~~~~~~~~~~~~~~~~~  197 (296)
                      +||||||..... ..     ...+..             +.+++.+++.+.+++|++||.. .++..            .
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~------------~  149 (255)
T PRK06057         82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA------------T  149 (255)
T ss_pred             EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC------------C
Confidence            999999864321 11     011111             4566767666667999999864 34321            1


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeeccc-------CccccCCcCHHHHHHHHHHHh
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE-------DTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~-------~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      +...|+.+|++.+.+.+       ..++++++|+||.+.++...........       ......+.+++|+++++..++
T Consensus       150 ~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  229 (255)
T PRK06057        150 SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLA  229 (255)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            13459999988776553       3589999999999988753322110000       001124688999999988777


Q ss_pred             cCCC--CCCCeEEE
Q 022495          264 LHPE--SSYKVVEI  275 (296)
Q Consensus       264 ~~~~--~~~~~~~i  275 (296)
                      .+..  ..+..+.+
T Consensus       230 ~~~~~~~~g~~~~~  243 (255)
T PRK06057        230 SDDASFITASTFLV  243 (255)
T ss_pred             CccccCccCcEEEE
Confidence            6533  23444444

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.8e-19  Score=150.44  Aligned_cols=201  Identities=17%  Similarity=0.204  Sum_probs=131.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhh---cccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++++++||||+|+||+++++.|+++|++|+++.|+... ..+   .+.....++.++.+|++| .+++.+++++    
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   80 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999888776432 111   111234578999999999 7877776652    


Q ss_pred             --CCCEEEEcCCCCCCCC----CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 --DSEAVVCATGFQPGWD----LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~----~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                        ++|+||||||......    ....+..         .++++++.+.  ..++||++||...+...            .
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------~  148 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL------------P  148 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC------------C
Confidence              4999999999643211    1111111         3444444332  23589999987653221            2


Q ss_pred             hhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee---ecc--cCccccCCcCHHHHHHHHHHHhcC
Q 022495          198 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII---MET--EDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~---~~~--~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ....|+.+|.+.+.+++.       .++++++++||.+.++...+...   ...  .......+.+++|+++++..++..
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~  228 (245)
T PRK12937        149 GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGP  228 (245)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence            245699999999987752       47999999999988764221110   000  011112456899999998888865


Q ss_pred             CC--CCCCeEEEE
Q 022495          266 PE--SSYKVVEII  276 (296)
Q Consensus       266 ~~--~~~~~~~i~  276 (296)
                      +.  ..+..+++.
T Consensus       229 ~~~~~~g~~~~~~  241 (245)
T PRK12937        229 DGAWVNGQVLRVN  241 (245)
T ss_pred             cccCccccEEEeC
Confidence            43  235555554

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.4e-19  Score=152.67  Aligned_cols=202  Identities=17%  Similarity=0.152  Sum_probs=132.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++++++||||+|+||++++++|+++|++|++++|+++...+..   .....++.++.+|++| .+++.+++++    
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~   83 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADE   83 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999876544321   1123467889999999 7777766543    


Q ss_pred             --CCCEEEEcCCCCCCCC--C--cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWD--L--FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~--~--~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||......  .  ...+.    .         +.+++.+++.+ ++||++||...+..            
T Consensus        84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~------------  150 (264)
T PRK07576         84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVP------------  150 (264)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccC------------
Confidence              3899999998532111  0  11110    1         33444444443 69999999864321            


Q ss_pred             hhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeec-------ccCccccCCcCHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME-------TEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~-------~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      ......|+.+|.+.+.+++.       .+++++.|+||.+.+..........       ........+..++|+|++++.
T Consensus       151 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  230 (264)
T PRK07576        151 MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALF  230 (264)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            12245699999999987752       5799999999998742211111000       000112346789999999999


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++..+.  ..+....+.+
T Consensus       231 l~~~~~~~~~G~~~~~~g  248 (264)
T PRK07576        231 LASDMASYITGVVLPVDG  248 (264)
T ss_pred             HcChhhcCccCCEEEECC
Confidence            987533  2455554444

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4e-19  Score=153.91  Aligned_cols=199  Identities=16%  Similarity=0.124  Sum_probs=129.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc---------chhhhc---ccCCCCCeEEEEcccCCChHHHHHH
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL---------DKAKTT---LSKDNPSLQIVKADVTEGSAKLSEA  131 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~  131 (296)
                      +++|+++||||+++||+++++.|+++|++|++++|+.         +...+.   +.....++.++.+|++| .+++.++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~   82 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAANL   82 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHHH
Confidence            4689999999999999999999999999999988765         332221   11123467889999999 7776665


Q ss_pred             hcC------CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcC------CCEEEEEccceecc
Q 022495          132 IGD------DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRG------VNRFILISSILVNG  182 (296)
Q Consensus       132 ~~~------~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~------~~~iV~~SS~~~~~  182 (296)
                      ++.      ++|++|||||+......    .+.+..             +.+++.+++.+      .++||++||...+.
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~  162 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ  162 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence            532      49999999997542111    111111             55556655432      25899999986532


Q ss_pred             CccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--ecccCccccCCcCHH
Q 022495          183 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--METEDTLYEGTISRD  253 (296)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--~~~~~~~~~~~i~~~  253 (296)
                      ..            .....|+.+|++++.+.+       ..|++++.|.|| +.++.......  .............++
T Consensus       163 ~~------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~pe  229 (286)
T PRK07791        163 GS------------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMAPE  229 (286)
T ss_pred             CC------------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcCcccccCCCCHH
Confidence            21            124569999999987664       368999999998 65543221100  000000001256899


Q ss_pred             HHHHHHHHHhcCCC--CCCCeEEEE
Q 022495          254 QVAEVAVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       254 Dva~~i~~~l~~~~--~~~~~~~i~  276 (296)
                      |+|++++.++....  ..|+.+.+.
T Consensus       230 dva~~~~~L~s~~~~~itG~~i~vd  254 (286)
T PRK07791        230 NVSPLVVWLGSAESRDVTGKVFEVE  254 (286)
T ss_pred             HHHHHHHHHhCchhcCCCCcEEEEc
Confidence            99999988876432  344444443

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.83  E-value=2.3e-19  Score=153.28  Aligned_cols=187  Identities=18%  Similarity=0.253  Sum_probs=127.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      |+++||||+|+||++++++|+++|++|++++|+++...+....  ...++.++.+|++| .+++.++++.      ++|+
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence            5899999999999999999999999999999997665432210  12368889999999 7777766532      4999


Q ss_pred             EEEcCCCCCC----C-C-CcchhH-------------HHHHHHHHH-HcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          139 VVCATGFQPG----W-D-LFAPWK-------------AINLVEACR-KRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       139 vv~~ag~~~~----~-~-~~~~~~-------------~~~~l~~~~-~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      ||||||....    . + ....+.             .+.+++.+. +.+.++||++||..++..            ..+
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~------------~~~  147 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP------------MPP  147 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC------------CCC
Confidence            9999996421    1 1 011111             044556554 344579999999865421            122


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---------eecc------cCc-cccCCcCHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---------IMET------EDT-LYEGTISRDQV  255 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---------~~~~------~~~-~~~~~i~~~Dv  255 (296)
                      ...|+.+|++.+.+.+       ..|++++.|.||++.++......         ....      ... ....+..++|+
T Consensus       148 ~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  227 (259)
T PRK08340        148 LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEEL  227 (259)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHH
Confidence            4568999999988765       25899999999999887432110         0000      001 11236789999


Q ss_pred             HHHHHHHhcCC
Q 022495          256 AEVAVEALLHP  266 (296)
Q Consensus       256 a~~i~~~l~~~  266 (296)
                      |++++.++..+
T Consensus       228 a~~~~fL~s~~  238 (259)
T PRK08340        228 GSLIAFLLSEN  238 (259)
T ss_pred             HHHHHHHcCcc
Confidence            99988877643

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.6e-19  Score=150.27  Aligned_cols=189  Identities=17%  Similarity=0.142  Sum_probs=125.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+.......++.++++|++| .+.+.++++.      ++|
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id   82 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999998765544332223468889999999 6655544331      399


Q ss_pred             EEEEcCCCCCCCCC----cchhHH---------HHHHHHHHH--cCCCEEEEEcccee-ccCccCccCChhhhhhhhhHH
Q 022495          138 AVVCATGFQPGWDL----FAPWKA---------INLVEACRK--RGVNRFILISSILV-NGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       138 ~vv~~ag~~~~~~~----~~~~~~---------~~~l~~~~~--~~~~~iV~~SS~~~-~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      +||||||.......    ...+..         .++++++..  ...+++|++||... |+.             ...+.
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-------------~~~~~  149 (249)
T PRK06500         83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-------------PNSSV  149 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-------------CCccH
Confidence            99999996432111    011111         455555543  12257888877543 321             12456


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc----eeec------ccCccccCCcCHHHHHHHHHHHhc
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN----IIME------TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~----~~~~------~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      |+.+|++.+.+++       ..++++++++||.++++.....    ....      ........+.+++|+|++++.++.
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  229 (249)
T PRK06500        150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLAS  229 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999998774       2489999999999998742110    0000      000011235689999999998876


Q ss_pred             CC
Q 022495          265 HP  266 (296)
Q Consensus       265 ~~  266 (296)
                      .+
T Consensus       230 ~~  231 (249)
T PRK06500        230 DE  231 (249)
T ss_pred             cc
Confidence            53

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=4.6e-19  Score=151.13  Aligned_cols=191  Identities=16%  Similarity=0.126  Sum_probs=128.5

Q ss_pred             cCCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCc-----------chh---hhcccCCCCCeEEEEcccCCChH
Q 022495           63 SVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDL-----------DKA---KTTLSKDNPSLQIVKADVTEGSA  126 (296)
Q Consensus        63 ~~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~---~~~~~~~~~~~~~~~~D~~d~~~  126 (296)
                      .+++|+++||||+|  +||++++++|+++|++|+++.|..           +..   .+.+...+..+.++++|++| .+
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~-~~   81 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ-ND   81 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC-HH
Confidence            35789999999995  899999999999999999875421           111   11111234568899999999 77


Q ss_pred             HHHHHhcC------CCCEEEEcCCCCCCCC--Ccc--hh------HH-------HHHHHHHHHcCCCEEEEEccceeccC
Q 022495          127 KLSEAIGD------DSEAVVCATGFQPGWD--LFA--PW------KA-------INLVEACRKRGVNRFILISSILVNGA  183 (296)
Q Consensus       127 ~~~~~~~~------~~d~vv~~ag~~~~~~--~~~--~~------~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~  183 (296)
                      ++.+++..      ++|++|||||......  ...  .+      +.       +.+++.+++.+.++||++||...+..
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP  161 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence            77766542      4899999999643211  111  11      11       66677777766679999999864321


Q ss_pred             ccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCc-cccCCcCHHHH
Q 022495          184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDT-LYEGTISRDQV  255 (296)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~-~~~~~i~~~Dv  255 (296)
                                  ..++..|+.+|++++.+.+       ..+++++.|+||.+.++............. .......++|+
T Consensus       162 ------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~  229 (256)
T PRK12859        162 ------------MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDA  229 (256)
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHH
Confidence                        2235679999999987764       358999999999998764222110000001 11235679999


Q ss_pred             HHHHHHHhcCC
Q 022495          256 AEVAVEALLHP  266 (296)
Q Consensus       256 a~~i~~~l~~~  266 (296)
                      |+++..++...
T Consensus       230 a~~~~~l~s~~  240 (256)
T PRK12859        230 ARLIKFLASEE  240 (256)
T ss_pred             HHHHHHHhCcc
Confidence            99998887653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=4.1e-19  Score=149.61  Aligned_cols=197  Identities=16%  Similarity=0.118  Sum_probs=131.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|+||||+|+||.++++.|+++|++|++++|++++.+.....  ...++.++++|++| .+.+.+++++      +
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA   81 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999998765443211  12368899999999 7777665533      3


Q ss_pred             CCEEEEcCCCCCCCCCcch--hH-------------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          136 SEAVVCATGFQPGWDLFAP--WK-------------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~~~--~~-------------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      +|.+||++|..........  ..             .+.+++.+++ + +++|++||......           +..+..
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~iv~~ss~~~~~~-----------~~~~~~  148 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-G-SSIVLVSSMSGIYK-----------ASPDQL  148 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-C-CEEEEEecchhccc-----------CCCCch
Confidence            7999999985432111111  00             0445555443 2 58999999754211           112245


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC--CCCC
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE--SSYK  271 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~  271 (296)
                      .|+.+|.+.+.+++       ..++++++||||+++++....... .........+++++|+++.++.++..+.  ..+.
T Consensus       149 ~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~-~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~  227 (238)
T PRK05786        149 SYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNW-KKLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGV  227 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhh-hhhccccCCCCCHHHHHHHHHHHhcccccCccCC
Confidence            69999998876553       358999999999999874322110 0011111236889999999999987543  2444


Q ss_pred             eEEE
Q 022495          272 VVEI  275 (296)
Q Consensus       272 ~~~i  275 (296)
                      .+.+
T Consensus       228 ~~~~  231 (238)
T PRK05786        228 VIPV  231 (238)
T ss_pred             EEEE
Confidence            4444

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.83  E-value=4.6e-19  Score=151.55  Aligned_cols=191  Identities=15%  Similarity=0.154  Sum_probs=129.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhh---cccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++..|+... ...   .+.....++.++.+|++| .+++.++++.    
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~   82 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988885432 221   111123567889999999 7777665532    


Q ss_pred             --CCCEEEEcCCCCCCCCC----cchh----HH---------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGWDL----FAPW----KA---------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~----~~~~----~~---------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|++|||||.......    ...+    ..         +.+++.+++.+ .++||++||...+..           
T Consensus        83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~-----------  151 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP-----------  151 (261)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC-----------
Confidence              49999999996432111    0111    00         45677777765 469999999754321           


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~  261 (296)
                       ......|+.+|++.+.+.+       ..+++++.|+||++.++.....+....      .......+..++|+++.+..
T Consensus       152 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  230 (261)
T PRK08936        152 -WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAW  230 (261)
T ss_pred             -CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             2234569999988886654       358999999999998875332211000      01112346789999999888


Q ss_pred             HhcCC
Q 022495          262 ALLHP  266 (296)
Q Consensus       262 ~l~~~  266 (296)
                      ++...
T Consensus       231 l~s~~  235 (261)
T PRK08936        231 LASSE  235 (261)
T ss_pred             HcCcc
Confidence            87654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.83  E-value=2.8e-19  Score=167.57  Aligned_cols=200  Identities=14%  Similarity=0.106  Sum_probs=136.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ...+|+++||||+|+||++++++|+++|++|++++|++++..+.......++..+.+|++| .+++.++++.      ++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL  344 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            3468999999999999999999999999999999998876654433223567789999999 7777665542      49


Q ss_pred             CEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |+||||||.......     ...+..             +.+++.++  +.++||++||...+...            .+
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~------------~~  410 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLAL------------PP  410 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCC------------CC
Confidence            999999997532111     111111             44455552  23699999998754321            22


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-----ecc--cCccccCCcCHHHHHHHHHHHhc
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----MET--EDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-----~~~--~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      ...|+.+|++.+.+.+       ..|++++.|+||.+.++.......     ...  .......+..++|+|++++.++.
T Consensus       411 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s  490 (520)
T PRK06484        411 RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLAS  490 (520)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            4579999999997765       358999999999998875322110     000  00011235789999999998886


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      ...  ..++.+.+.+
T Consensus       491 ~~~~~~~G~~i~vdg  505 (520)
T PRK06484        491 PAASYVNGATLTVDG  505 (520)
T ss_pred             ccccCccCcEEEECC
Confidence            432  3455555543

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=3.5e-19  Score=153.27  Aligned_cols=197  Identities=14%  Similarity=0.147  Sum_probs=129.2

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcc---hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||+  ++||+++++.|+++|++|++.+|+..   ...+........ .++.+|++| .+++.++++.    
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d-~~~v~~~~~~i~~~   80 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSK-PEHFKSLAESLKKD   80 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCC-HHHHHHHHHHHHHH
Confidence            468999999997  89999999999999999999998842   222222111223 678999999 7776665532    


Q ss_pred             --CCCEEEEcCCCCCC----CC--C--cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          135 --DSEAVVCATGFQPG----WD--L--FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 --~~d~vv~~ag~~~~----~~--~--~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                        ++|++|||||+...    ..  .  .+.+..             +.+++.+++.  ++||++||......        
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~--------  150 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKY--------  150 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccC--------
Confidence              59999999997431    11  1  111111             6677777653  58999999753211        


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----c--ccCccccCCcCHHHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----E--TEDTLYEGTISRDQVAEV  258 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~--~~~~~~~~~i~~~Dva~~  258 (296)
                          ...+..|+.+|++.+.+.+       .+|++++.|.||.+.++........    .  ........+..++|+|++
T Consensus       151 ----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~  226 (274)
T PRK08415        151 ----VPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNS  226 (274)
T ss_pred             ----CCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHH
Confidence                1124679999999987764       3689999999999988532110000    0  000011235789999999


Q ss_pred             HHHHhcCCC--CCCCeEEEE
Q 022495          259 AVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~  276 (296)
                      ++.++....  ..+.++.+.
T Consensus       227 v~fL~s~~~~~itG~~i~vd  246 (274)
T PRK08415        227 GMYLLSDLSSGVTGEIHYVD  246 (274)
T ss_pred             HHHHhhhhhhcccccEEEEc
Confidence            988886432  344444443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.83  E-value=4.1e-19  Score=150.43  Aligned_cols=199  Identities=17%  Similarity=0.183  Sum_probs=130.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-Ccchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ++|+++||||+|+||++++++|+++|++|+++.+ +.....+..   ......+.++.+|++| .+.+.+++++      
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999888644 332222211   1123467788999999 7777665542      


Q ss_pred             CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||......    ....+..             +.+++.+++.+.++||++||......            ..
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~  148 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG------------QF  148 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC------------CC
Confidence            4999999999743211    0111110             56777777777789999999754221            11


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc---eee-cccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN---IIM-ETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~---~~~-~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      .+..|+.+|.+.+.+.+       ..+++++.|+||++.++.....   ... .........+..++|+++++..++..+
T Consensus       149 ~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        149 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcc
Confidence            25669999998887654       3589999999999988753211   000 000111123578899999988777543


Q ss_pred             C--CCCCeEEEE
Q 022495          267 E--SSYKVVEII  276 (296)
Q Consensus       267 ~--~~~~~~~i~  276 (296)
                      .  ..+.++.+.
T Consensus       229 ~~~~~g~~~~~~  240 (246)
T PRK12938        229 SGFSTGADFSLN  240 (246)
T ss_pred             cCCccCcEEEEC
Confidence            2  344455443

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.7e-19  Score=150.02  Aligned_cols=195  Identities=14%  Similarity=0.125  Sum_probs=134.6

Q ss_pred             EEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC--CCCEEEEcCCC
Q 022495           70 FVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCATGF  145 (296)
Q Consensus        70 lVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv~~ag~  145 (296)
                      +||||+|+||++++++|+++|++|++++|+++........  ...+++++.+|++| .+.+.++++.  ++|++|||+|.
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~id~li~~ag~   79 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITD-EAAVDAFFAEAGPFDHVVITAAD   79 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHhcCCCCEEEECCCC
Confidence            6999999999999999999999999999987665433211  13568899999999 8888887765  48999999996


Q ss_pred             CCCCCCc----chhHH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH
Q 022495          146 QPGWDLF----APWKA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY  212 (296)
Q Consensus       146 ~~~~~~~----~~~~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  212 (296)
                      .......    .....         .+++++....+.++||++||...+...            .+.+.|+.+|.+.+.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~------------~~~~~Y~~sK~a~~~~  147 (230)
T PRK07041         80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS------------ASGVLQGAINAALEAL  147 (230)
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC------------CcchHHHHHHHHHHHH
Confidence            4322110    11110         445554444456799999999766432            2246799999999987


Q ss_pred             HHH-----hCCcEEEEecCcccCCCCCCce-------eecccCc-cccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          213 IRK-----SGINYTIIRPGGLRNEPPTGNI-------IMETEDT-LYEGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       213 ~~~-----~~~~~~~lrp~~i~g~~~~~~~-------~~~~~~~-~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      .+.     .+++++.++||.+.++......       ....... .......++|+|++++.++..+...++.+++.+
T Consensus       148 ~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  225 (230)
T PRK07041        148 ARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGFTTGSTVLVDG  225 (230)
T ss_pred             HHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence            753     3689999999998775421100       0000000 011245789999999999887655677887765

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.4e-19  Score=158.36  Aligned_cols=203  Identities=18%  Similarity=0.088  Sum_probs=129.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----c-CCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----S-KDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ++++|+|+||||+|+||++++++|+++|++|++++|+.++..+..    . .....+.++.+|++| .+++.++++.   
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~   91 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRA   91 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999876543211    1 013468899999999 7777665542   


Q ss_pred             ---CCCEEEEcCCCCCCCC-----C-cc--hhHH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh--hhh
Q 022495          135 ---DSEAVVCATGFQPGWD-----L-FA--PWKA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNP--AYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~-----~-~~--~~~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~--~~~  194 (296)
                         ++|+||||||......     . ..  ..+.       +.+++.+++.+.++||++||...+..... ..+.  ...
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~-~~~~~~~~~  170 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAI-HFDDLQWER  170 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCC-CccccCccc
Confidence               4999999999642211     0 00  1111       67888888877789999999875421110 0111  011


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH-------hCCcEEEE--ecCcccCCCCCCcee-ecccCccccC--CcCHHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK-------SGINYTII--RPGGLRNEPPTGNII-METEDTLYEG--TISRDQVAEVAVEA  262 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~l--rp~~i~g~~~~~~~~-~~~~~~~~~~--~i~~~Dva~~i~~~  262 (296)
                      +..+...|+.+|++.+.+.+.       .+++++++  .||.+.++...+... ..........  ....+.-+..++.+
T Consensus       171 ~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  250 (306)
T PRK06197        171 RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRA  250 (306)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHH
Confidence            244577899999999876642       46666654  799998875332110 0000000111  24456666666666


Q ss_pred             hcCCC
Q 022495          263 LLHPE  267 (296)
Q Consensus       263 l~~~~  267 (296)
                      ...+.
T Consensus       251 ~~~~~  255 (306)
T PRK06197        251 ATDPA  255 (306)
T ss_pred             hcCCC
Confidence            66553

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6e-19  Score=150.92  Aligned_cols=190  Identities=17%  Similarity=0.104  Sum_probs=126.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh--hcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++++||||+|+||+++++.|+++|++|++++|+.....  +.......++.++.+|++| .+++.+++..      +
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999999864221  1111123567889999999 7777766542      4


Q ss_pred             CCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    .....    .         +.+++.+++.+.++||++||......           +...
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~  151 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV-----------ADPG  151 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc-----------CCCC
Confidence            8999999996432111    11111    0         34445555556679999999753110           0112


Q ss_pred             hHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee----------ecc--cCccccCCcCHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII----------MET--EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~----------~~~--~~~~~~~~i~~~Dva~~i  259 (296)
                      +..|+.+|.+.+.+.+.       .+++++.|+||.+.++...+...          ...  .......+.+++|+|+++
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~  231 (263)
T PRK08226        152 ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELA  231 (263)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            45699999999877652       48999999999998864221100          000  000112356899999998


Q ss_pred             HHHhcC
Q 022495          260 VEALLH  265 (296)
Q Consensus       260 ~~~l~~  265 (296)
                      ..++..
T Consensus       232 ~~l~~~  237 (263)
T PRK08226        232 AFLASD  237 (263)
T ss_pred             HHHcCc
Confidence            877754

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.7e-19  Score=151.54  Aligned_cols=200  Identities=17%  Similarity=0.136  Sum_probs=134.2

Q ss_pred             cCCCCeEEEEcCCc-hHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---C--CCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           63 SVKQKKIFVAGATG-SSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      .+++++++||||+| +||+++++.|+++|++|++.+|+.++..+...   .  ...++.++++|++| .+.+.++++.  
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHHH
Confidence            34579999999997 89999999999999999999998765543221   1  12368889999999 7777665532  


Q ss_pred             ----CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChh
Q 022495          135 ----DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                          ++|+||||||........    ..+..             +.+++.+++.+ .++||++||...+...        
T Consensus        93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~--------  164 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ--------  164 (262)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC--------
Confidence                489999999964321110    11110             55666666665 5799999987543211        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---ee--cccCccccCCcCHHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---IM--ETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~~--~~~~~~~~~~i~~~Dva~~i~  260 (296)
                          .+...|+.+|++.+.+.+       .+++++++|+||.+.++......   ..  .........+..++|+|++++
T Consensus       165 ----~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~  240 (262)
T PRK07831        165 ----HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIA  240 (262)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                124569999999998775       25899999999999887532110   00  000111234678999999998


Q ss_pred             HHhcCCC--CCCCeEEE
Q 022495          261 EALLHPE--SSYKVVEI  275 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i  275 (296)
                      .++....  ..|+++.+
T Consensus       241 ~l~s~~~~~itG~~i~v  257 (262)
T PRK07831        241 FLASDYSSYLTGEVVSV  257 (262)
T ss_pred             HHcCchhcCcCCceEEe
Confidence            8776543  24444443

>PRK05855 short chain dehydrogenase; Validated

Probab=99.83  E-value=4e-19  Score=168.48  Aligned_cols=192  Identities=17%  Similarity=0.175  Sum_probs=136.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      .+++++++||||+|+||++++++|+++|++|++++|+.++..+..   .....++.++.+|++| .+.+.++++.     
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~  390 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEH  390 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhc
Confidence            456789999999999999999999999999999999976654322   1123578999999999 7777666543     


Q ss_pred             -CCCEEEEcCCCCCCCCCc----chhH------H-------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF----APWK------A-------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~----~~~~------~-------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||........    +.+.      .       +.+++.+++.+ .++||++||..+|....          
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  460 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR----------  460 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------
Confidence             499999999975422111    1111      0       55666677665 36999999998775332          


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeeccc-----------Cc-cccCCcCHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE-----------DT-LYEGTISRDQVA  256 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~-----------~~-~~~~~i~~~Dva  256 (296)
                        ....|+.+|++.+.+.+       +.|+++++|+||.+.++...........           .. .......++|+|
T Consensus       461 --~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va  538 (582)
T PRK05855        461 --SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVA  538 (582)
T ss_pred             --CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHH
Confidence              24679999999987664       3589999999999988643322110000           00 011235789999


Q ss_pred             HHHHHHhcCCC
Q 022495          257 EVAVEALLHPE  267 (296)
Q Consensus       257 ~~i~~~l~~~~  267 (296)
                      +.++.++..+.
T Consensus       539 ~~~~~~~~~~~  549 (582)
T PRK05855        539 KAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHcCC
Confidence            99999998754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=5.4e-19  Score=151.89  Aligned_cols=197  Identities=17%  Similarity=0.145  Sum_probs=128.1

Q ss_pred             CCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcchh---hhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKA---KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|++|||||++  +||+++|++|+++|++|++.+|+....   .+... ......++++|++| .+++.++++.    
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~-~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAE-SLGSDFVLPCDVED-IASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHH-hcCCceEEeCCCCC-HHHHHHHHHHHHHH
Confidence            5689999999997  999999999999999999998875322   22211 11223578999999 7776665532    


Q ss_pred             --CCCEEEEcCCCCCCC------CC--cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          135 --DSEAVVCATGFQPGW------DL--FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~------~~--~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                        ++|++|||||+....      ..  .+.+..             +.+++.|++ + ++||++||......        
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~-G~Iv~isS~~~~~~--------  152 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-G-GSMLTLTYGGSTRV--------  152 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-C-ceEEEEcCCCcccc--------
Confidence              499999999974321      00  111111             455566653 3 69999999853211        


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee----ecc-cCc-cccCCcCHHHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----MET-EDT-LYEGTISRDQVAEV  258 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~----~~~-~~~-~~~~~i~~~Dva~~  258 (296)
                          ...+..|+.+|++++.+.+       ..|++++.|.||.+.++.......    ... ... ....+..++|+|++
T Consensus       153 ----~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~  228 (271)
T PRK06505        153 ----MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGS  228 (271)
T ss_pred             ----CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHH
Confidence                1225579999999987764       358999999999998864221100    000 001 11235789999999


Q ss_pred             HHHHhcCCC--CCCCeEEEE
Q 022495          259 AVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~  276 (296)
                      ++.++....  ..+.++.+.
T Consensus       229 ~~fL~s~~~~~itG~~i~vd  248 (271)
T PRK06505        229 ALYLLSDLSSGVTGEIHFVD  248 (271)
T ss_pred             HHHHhCccccccCceEEeec
Confidence            988876432  234444443

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=7.2e-19  Score=150.36  Aligned_cols=188  Identities=18%  Similarity=0.246  Sum_probs=125.0

Q ss_pred             CCCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEcCcc---hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||  +++||+++|+.|+++|++|++..|...   ...++.. .......+++|++| .+++.++++.    
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   81 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAA-ELDSELVFRCDVAS-DDEINQVFADLGKH   81 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHh-ccCCceEEECCCCC-HHHHHHHHHHHHHH
Confidence            56899999997  679999999999999999998876532   2222221 11335678999999 7777665532    


Q ss_pred             --CCCEEEEcCCCCCCC-------CCc--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCC
Q 022495          135 --DSEAVVCATGFQPGW-------DLF--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~-------~~~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                        ++|++|||||+....       +..  +.+..             +.+++.+++.+ ++||++||...+..       
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~~~-------  153 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAVRA-------  153 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccccC-------
Confidence              499999999975321       111  11111             44555555443 68999999864321       


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce----eec--ccCccccCCcCHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI----IME--TEDTLYEGTISRDQVAE  257 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~----~~~--~~~~~~~~~i~~~Dva~  257 (296)
                           ...+..|+.+|++.+.+.+       .+|++++.|.||.+.++......    ...  ........+..++|+|+
T Consensus       154 -----~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~  228 (261)
T PRK08690        154 -----IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGN  228 (261)
T ss_pred             -----CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHH
Confidence                 1225669999999987764       36899999999999886422110    000  00011123678999999


Q ss_pred             HHHHHhcCC
Q 022495          258 VAVEALLHP  266 (296)
Q Consensus       258 ~i~~~l~~~  266 (296)
                      +++.++...
T Consensus       229 ~v~~l~s~~  237 (261)
T PRK08690        229 TAAFLLSDL  237 (261)
T ss_pred             HHHHHhCcc
Confidence            999888754

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1e-18  Score=148.15  Aligned_cols=200  Identities=16%  Similarity=0.147  Sum_probs=127.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++||||+|+||++++++|+++|++|++..++ ++...+.   +.....++.++.+|++| .+++.+++..      +
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD-EADVLRLFEAVDRELGR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCC-HHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999998877643 3332221   11123467889999999 7777776652      4


Q ss_pred             CCEEEEcCCCCCCCCCc---c--hhHH-------------HHHHHHHHHcC---CCEEEEEccceeccCccCccCChhhh
Q 022495          136 SEAVVCATGFQPGWDLF---A--PWKA-------------INLVEACRKRG---VNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~---~--~~~~-------------~~~l~~~~~~~---~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                      +|+||||||........   .  .+..             +.+++.+++.+   .++||++||...+....+        
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------  152 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG--------  152 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--------
Confidence            89999999975321110   0  1101             33344443321   247999999864321111        


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----ccCccccCCcCHHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                         .+..|+.+|++.+.+++       +.++++++||||.++++.........     ..........+++|++++++.+
T Consensus       153 ---~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l  229 (248)
T PRK06123        153 ---EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWL  229 (248)
T ss_pred             ---CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence               12349999999998764       24899999999999997532111000     0000011235789999999988


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +....  ..++++++.+
T Consensus       230 ~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        230 LSDEASYTTGTFIDVSG  246 (248)
T ss_pred             hCccccCccCCEEeecC
Confidence            87542  3566777754

>PRK12742 oxidoreductase; Provisional

Probab=99.83  E-value=4.6e-19  Score=149.24  Aligned_cols=187  Identities=16%  Similarity=0.188  Sum_probs=123.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV  140 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv  140 (296)
                      +++|+|+||||+|+||++++++|+++|++|+++.|. .+..+++..  ..++.++.+|++| .+.+.+.++.  ++|++|
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~--~~~~~~~~~D~~~-~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ--ETGATAVQTDSAD-RDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH--HhCCeEEecCCCC-HHHHHHHHHHhCCCcEEE
Confidence            568999999999999999999999999999887664 333333221  1246788999999 7777766543  499999


Q ss_pred             EcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHH
Q 022495          141 CATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL  203 (296)
Q Consensus       141 ~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~  203 (296)
                      ||||........    ..+..             +.+++.+++  .+++|++||......           +..+...|+
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~-----------~~~~~~~Y~  147 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRM-----------PVAGMAAYA  147 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccC-----------CCCCCcchH
Confidence            999964321111    11111             233333332  369999999753110           112355699


Q ss_pred             HHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc---cCccccCCcCHHHHHHHHHHHhcCC
Q 022495          204 IAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET---EDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       204 ~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~---~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      .+|++.+.+++       ..++++++|+||.+.++..........   .......+.+++|+++++..++...
T Consensus       148 ~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~  220 (237)
T PRK12742        148 ASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPE  220 (237)
T ss_pred             HhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999997764       358999999999998865322110000   0011134678999999988877643

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2e-18  Score=151.00  Aligned_cols=219  Identities=16%  Similarity=0.092  Sum_probs=137.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-hhhh---cccCCCCCeEEEEcccCCChHHHHHHhc----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIG----  133 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~----  133 (296)
                      .++++|+++||||+|+||++++++|+++|++|++.++... ...+   .+.....++.++.+|++| .+.+.++++    
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~   86 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVG   86 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999887532 2221   121134578899999999 777666553    


Q ss_pred             -CCCCEEEEcCCCCCCCC----CcchhH----H---------HHHHHHHHHc-------CCCEEEEEccceeccCccCcc
Q 022495          134 -DDSEAVVCATGFQPGWD----LFAPWK----A---------INLVEACRKR-------GVNRFILISSILVNGAAMGQI  188 (296)
Q Consensus       134 -~~~d~vv~~ag~~~~~~----~~~~~~----~---------~~~l~~~~~~-------~~~~iV~~SS~~~~~~~~~~~  188 (296)
                       +++|+||||||......    ....+.    .         +.+++.+++.       ..++||++||...+....   
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  163 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV---  163 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC---
Confidence             14999999999754321    111111    1         3333334332       125899999986543221   


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-ecccCccccCCcCHHHHHHHHH
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-METEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                               ....|+.+|.+++.+.+       .+|++++.|.|| +.+........ ..........+++++|+|.++.
T Consensus       164 ---------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~  233 (306)
T PRK07792        164 ---------GQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQ  233 (306)
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchhhhhccCCCCHHHHHHHHH
Confidence                     13469999999987764       368999999998 34432211100 0000011123568999999988


Q ss_pred             HHhcCC--CCCCCeEEEEeCC---------------CCCCCCHHHHHHHhh
Q 022495          261 EALLHP--ESSYKVVEIISRV---------------DAPKRSYEDLFGSIK  294 (296)
Q Consensus       261 ~~l~~~--~~~~~~~~i~~~~---------------~~~~~~~~el~~~i~  294 (296)
                      .++...  ...|.++.+.+..               ++...+..|+.+.+.
T Consensus       234 ~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (306)
T PRK07792        234 FLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLR  284 (306)
T ss_pred             HHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHH
Confidence            877642  2345555553210               124567777766554

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=4.1e-19  Score=151.52  Aligned_cols=189  Identities=14%  Similarity=0.165  Sum_probs=125.4

Q ss_pred             cCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCc---chhhhcccC-CCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDL---DKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      ++++|+++||||+  ++||++++++|+++|++|++.+|+.   +..+++... ...++.++.+|++| .+++.++++.  
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~   82 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIK   82 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHH
Confidence            4568999999997  8999999999999999999987753   223322211 13468889999999 7776665532  


Q ss_pred             ----CCCEEEEcCCCCCCC---CC---cc--hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccC
Q 022495          135 ----DSEAVVCATGFQPGW---DL---FA--PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~---~~---~~--~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~  189 (296)
                          ++|++|||||+....   ..   ..  .+..             +.+++.+++  .++||++||......      
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~------  154 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERV------  154 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccC------
Confidence                599999999964310   10   00  1110             445555544  259999999864211      


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc--e-e-ecc-cCc-cccCCcCHHHHH
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN--I-I-MET-EDT-LYEGTISRDQVA  256 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~--~-~-~~~-~~~-~~~~~i~~~Dva  256 (296)
                            ...+..|+.+|++.+.+.+       ..|++++.|.||.+.++.....  . . ... ... ....+..++|+|
T Consensus       155 ------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va  228 (257)
T PRK08594        155 ------VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVG  228 (257)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHH
Confidence                  1124569999999998764       3589999999999988632110  0 0 000 000 112367899999


Q ss_pred             HHHHHHhcCC
Q 022495          257 EVAVEALLHP  266 (296)
Q Consensus       257 ~~i~~~l~~~  266 (296)
                      ++++.++...
T Consensus       229 ~~~~~l~s~~  238 (257)
T PRK08594        229 DTAAFLFSDL  238 (257)
T ss_pred             HHHHHHcCcc
Confidence            9988887653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.82  E-value=5.6e-19  Score=169.08  Aligned_cols=203  Identities=19%  Similarity=0.250  Sum_probs=136.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-----CCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      .++++|++|||||+|+||+++++.|+++|++|++++|+.+........     ....+..+.+|++| .+++.+++..  
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~  488 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVA  488 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHH
Confidence            456789999999999999999999999999999999987655432210     12357789999999 8887776652  


Q ss_pred             ----CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChh
Q 022495          135 ----DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                          ++|+||||||.......    ...+..             +.+++.+++.+ .++||++||...+...        
T Consensus       489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~--------  560 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG--------  560 (676)
T ss_pred             HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC--------
Confidence                39999999996432211    111111             46667777665 3589999997643221        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCC-C-CCcee--------ecc--------cCcccc
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEP-P-TGNII--------MET--------EDTLYE  247 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~-~-~~~~~--------~~~--------~~~~~~  247 (296)
                          .....|+.+|++.+.+++.       .|++++.|+||.+.... . .+...        ...        ......
T Consensus       561 ----~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~  636 (676)
T TIGR02632       561 ----KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLK  636 (676)
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcC
Confidence                1246799999999987752       48999999999887421 1 00000        000        011113


Q ss_pred             CCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          248 GTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       248 ~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      .+++++|+|++++.++....  ..+.++++.+
T Consensus       637 r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       637 RHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             CCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            46889999999998876432  2355565544

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.7e-19  Score=171.24  Aligned_cols=186  Identities=19%  Similarity=0.232  Sum_probs=137.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+++...+...   ....++.++.+|++| .+.+.++++.     
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~  446 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD-SAAVDHTVKDILAEH  446 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999876544321   123578999999999 7877766652     


Q ss_pred             -CCCEEEEcCCCCCCCC---Cc---chhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 -DSEAVVCATGFQPGWD---LF---APWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~---~~---~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                       ++|++|||||......   ..   +...      .       +.+++.+++.+.++||++||..++....         
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  517 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP---------  517 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC---------
Confidence             4999999999642111   00   1111      0       5667777777778999999998765321         


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                         ..+.|+.+|++.+.+.+       ..++++++|+||.+.++...+....     .....++++++|+.++..+...
T Consensus       518 ---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~-----~~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        518 ---RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY-----NNVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc-----cCCCCCCHHHHHHHHHHHHHhC
Confidence               24569999999998764       3589999999999998754322111     1124688999999999988653

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-18  Score=148.48  Aligned_cols=199  Identities=14%  Similarity=0.140  Sum_probs=129.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+...+..   .....++.++++|++| .+++.+++..      ++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCCc
Confidence            478999999999999999999999999999999876554322   1123578899999999 7777665532      38


Q ss_pred             CEEEEcCCCCCCCC--Cc--chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWD--LF--APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~--~~--~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |+||||||......  ..  +.+..             +.+++.+.+.+ .++||++||...+....            .
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------~  147 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP------------G  147 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC------------C
Confidence            99999998532211  11  11111             44445444433 46999999986432211            1


Q ss_pred             hHHHHHHHHHHHHHHH--------HhCCcEEEEecCcccCCCCCCceeecc-------cCccccCCcCHHHHHHHHHHHh
Q 022495          199 FGLTLIAKLQAEQYIR--------KSGINYTIIRPGGLRNEPPTGNIIMET-------EDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~--------~~~~~~~~lrp~~i~g~~~~~~~~~~~-------~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      ...|+.+|++.+.+.+        ++|++++.|+||.+.+...........       .......+..++|+|+++..++
T Consensus       148 ~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  227 (252)
T PRK07677        148 VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLL  227 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHc
Confidence            3458899999887664        248999999999998532111111000       0011234678999999988877


Q ss_pred             cCC--CCCCCeEEEEe
Q 022495          264 LHP--ESSYKVVEIIS  277 (296)
Q Consensus       264 ~~~--~~~~~~~~i~~  277 (296)
                      ...  ...|.++.+.+
T Consensus       228 ~~~~~~~~g~~~~~~g  243 (252)
T PRK07677        228 SDEAAYINGTCITMDG  243 (252)
T ss_pred             CccccccCCCEEEECC
Confidence            643  23445555443

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=5.7e-19  Score=150.74  Aligned_cols=198  Identities=16%  Similarity=0.139  Sum_probs=130.2

Q ss_pred             ccCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcchh---hhcccCCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKA---KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      +++++|+++||||+  ++||++++++|+++|++|++.+|+.+..   .+... ....+.++++|++| .+++.++++.  
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~-~~~v~~~~~~~~   83 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAE-ELDAPIFLPLDVRE-PGQLEAVFARIA   83 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHH-hhccceEEecCcCC-HHHHHHHHHHHH
Confidence            45678999999998  5999999999999999999999985432   22211 11235688999999 7776655432  


Q ss_pred             ----CCCEEEEcCCCCCCC-------C-CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccC
Q 022495          135 ----DSEAVVCATGFQPGW-------D-LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~-------~-~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~  189 (296)
                          ++|++|||||.....       + ..+.+..             +.+++.+++.  ++||++||......      
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~--g~Ii~iss~~~~~~------  155 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG--GSLLTMSYYGAEKV------  155 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC--CEEEEEeccccccC------
Confidence                499999999974321       0 0111111             5566666542  58999998753211      


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----c-cCccccCCcCHHHHH
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----T-EDTLYEGTISRDQVA  256 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~-~~~~~~~~i~~~Dva  256 (296)
                            ...+..|+.+|++.+.+.+       ..+++++.|.||.+.++.........     . .......+..++|+|
T Consensus       156 ------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva  229 (258)
T PRK07533        156 ------VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVG  229 (258)
T ss_pred             ------CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHH
Confidence                  1235679999999987664       36899999999999886432110000     0 000112367889999


Q ss_pred             HHHHHHhcCCC--CCCCeEEE
Q 022495          257 EVAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       257 ~~i~~~l~~~~--~~~~~~~i  275 (296)
                      ++++.++.+..  ..++.+.+
T Consensus       230 ~~~~~L~s~~~~~itG~~i~v  250 (258)
T PRK07533        230 AVAAFLASDAARRLTGNTLYI  250 (258)
T ss_pred             HHHHHHhChhhccccCcEEee
Confidence            99988886532  34444444

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.9e-19  Score=157.83  Aligned_cols=203  Identities=17%  Similarity=0.144  Sum_probs=132.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---C--CCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ++++|+++||||+++||.+++++|+++|++|+++.|+.++..+...   .  ...++.++.+|+.| .++++++++.   
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~   89 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRA   89 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999776543221   1  12468899999999 7777765532   


Q ss_pred             ---CCCEEEEcCCCCCCCC---CcchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCcc-CccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWD---LFAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAM-GQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~---~~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~-~~~~~~~~~  194 (296)
                         ++|++|||||......   ..+.+.    +         +.+++.+++. .++||++||...+.... ...... ..
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~-~~  167 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNW-ER  167 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccc-cc
Confidence               4999999999643211   111111    0         5666666654 46999999986543211 111111 11


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH---------hCCcEEEEecCcccCCCCCCceeec--------ccCc-cc-cC--CcCHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGNIIME--------TEDT-LY-EG--TISRD  253 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~---------~~~~~~~lrp~~i~g~~~~~~~~~~--------~~~~-~~-~~--~i~~~  253 (296)
                      +..+...|+.+|.+.+.+.++         .+++++.+.||.+.++.........        .... .. .+  ..+++
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVE  247 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHH
Confidence            245577899999999876542         3699999999999886432110000        0000 00 01  24667


Q ss_pred             HHHHHHHHHhcCCCC
Q 022495          254 QVAEVAVEALLHPES  268 (296)
Q Consensus       254 Dva~~i~~~l~~~~~  268 (296)
                      +-|...+.+...+..
T Consensus       248 ~ga~~~l~~a~~~~~  262 (313)
T PRK05854        248 SAILPALYAATSPDA  262 (313)
T ss_pred             HHHHHhhheeeCCCC
Confidence            777777777766653

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1e-18  Score=147.39  Aligned_cols=186  Identities=16%  Similarity=0.190  Sum_probs=126.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCC-hHHHHH-------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEG-SAKLSE-------  130 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~-~~~~~~-------  130 (296)
                      +|++++++||||+|+||++++++|+++|++|++++|++++..+...    .....+.++.+|+.|. .+.+.+       
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999876543321    1224577888999751 223332       


Q ss_pred             Hh-cCCCCEEEEcCCCCCCC---CC--cchh----HH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          131 AI-GDDSEAVVCATGFQPGW---DL--FAPW----KA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       131 ~~-~~~~d~vv~~ag~~~~~---~~--~~~~----~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                      .+ .. +|+||||||.....   ..  ...+    ..         +.+++.+.+.+.+++|++||.....         
T Consensus        83 ~~~~~-id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~---------  152 (239)
T PRK08703         83 ATQGK-LDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET---------  152 (239)
T ss_pred             HhCCC-CCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc---------
Confidence            23 34 89999999964221   11  1111    11         5556666666667999999975321         


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHH-------h-CCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHh
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIRK-------S-GINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~~-------~-~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                         +......|+.+|++.+.+++.       . ++++++|+||.+.++......  ..  .....+...+|++..+..++
T Consensus       153 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~  225 (239)
T PRK08703        153 ---PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH--PG--EAKSERKSYGDVLPAFVWWA  225 (239)
T ss_pred             ---CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC--CC--CCccccCCHHHHHHHHHHHh
Confidence               112245699999999987642       2 699999999999997533221  11  11224678999999988888


Q ss_pred             cC
Q 022495          264 LH  265 (296)
Q Consensus       264 ~~  265 (296)
                      ..
T Consensus       226 ~~  227 (239)
T PRK08703        226 SA  227 (239)
T ss_pred             Cc
Confidence            73

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.82  E-value=7.6e-19  Score=148.96  Aligned_cols=198  Identities=18%  Similarity=0.164  Sum_probs=125.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEE-cCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV-RDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +|+|+||||+|+||+.+++.|+++|++|+++. |+++.....   +.....++.++.+|++| .+++.++++.      +
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN-EADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCC-HHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999998765 444433322   11123578999999999 7776655431      4


Q ss_pred             CCEEEEcCCCCCCCC---Ccch--h----HH---------HHHHHHHHHcC---CCEEEEEccceeccCccCccCChhhh
Q 022495          136 SEAVVCATGFQPGWD---LFAP--W----KA---------INLVEACRKRG---VNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~---~~~~--~----~~---------~~~l~~~~~~~---~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                      +|+||||||......   ....  +    ..         +.+++.+...+   -++||++||...+....         
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~---------  151 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP---------  151 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC---------
Confidence            999999999643211   1111  0    01         23344443332   24799999976432111         


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC--ceee--c-ccCccccCCcCHHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG--NIIM--E-TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~--~~~~--~-~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                        ..+..|+.+|.+.+.+.+       ..++++++++||++.++....  ....  . ..........+++|+|+.++.+
T Consensus       152 --~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l  229 (248)
T PRK06947        152 --NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWL  229 (248)
T ss_pred             --CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence              012459999999987654       248999999999999874321  1000  0 0000112256889999999998


Q ss_pred             hcCCC--CCCCeEEE
Q 022495          263 LLHPE--SSYKVVEI  275 (296)
Q Consensus       263 l~~~~--~~~~~~~i  275 (296)
                      +.++.  ..|+++.+
T Consensus       230 ~~~~~~~~~G~~~~~  244 (248)
T PRK06947        230 LSDAASYVTGALLDV  244 (248)
T ss_pred             cCccccCcCCceEee
Confidence            87653  34444444

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.82  E-value=9.1e-19  Score=148.23  Aligned_cols=199  Identities=15%  Similarity=0.140  Sum_probs=127.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++||||+|+||++++++|+++|++|+++ .|++++..+..   .....++.++++|++| .+++.+++++      +
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD-ENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC-HHHHHHHHHHHHHhCCC
Confidence            3689999999999999999999999999874 56655433222   1123468889999999 7877766553      4


Q ss_pred             CCEEEEcCCCCCCCCCc---c--hhHH-------------HHHHHHHHHcC---CCEEEEEccceeccCccCccCChhhh
Q 022495          136 SEAVVCATGFQPGWDLF---A--PWKA-------------INLVEACRKRG---VNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~---~--~~~~-------------~~~l~~~~~~~---~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                      +|+||||+|........   .  .+..             +.+++.+.+..   .++||++||...+....+        
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~--------  151 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG--------  151 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC--------
Confidence            89999999964221111   0  0110             33444444431   357999999865432111        


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----ccCccccCCcCHHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                         .+..|+.+|.+.+.+++       +.+++++++|||.++++.........     ..........+++|+|++++.+
T Consensus       152 ---~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  228 (247)
T PRK09730        152 ---EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWL  228 (247)
T ss_pred             ---cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhh
Confidence               12348999999987664       35899999999999997532110000     0000111234789999999988


Q ss_pred             hcCCC--CCCCeEEEE
Q 022495          263 LLHPE--SSYKVVEII  276 (296)
Q Consensus       263 l~~~~--~~~~~~~i~  276 (296)
                      +..+.  ..+..+.+.
T Consensus       229 ~~~~~~~~~g~~~~~~  244 (247)
T PRK09730        229 LSDKASYVTGSFIDLA  244 (247)
T ss_pred             cChhhcCccCcEEecC
Confidence            86542  334455443

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.82  E-value=9e-19  Score=149.55  Aligned_cols=201  Identities=17%  Similarity=0.212  Sum_probs=135.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++|+++||||+|+||+.+++.|+++|++ |++++|++++....   +......+.++.+|++| .+.+.++++.     
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   82 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            56899999999999999999999999998 99999987654422   11133568889999999 7777766542     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||+|.......    ...+.    .         +.+++.+.+.+ .+++|++||...++...          
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~----------  152 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP----------  152 (260)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC----------
Confidence             38999999996432111    11111    0         34455555543 46899999987765321          


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC---cee------ec--ccCccccCCcCHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG---NII------ME--TEDTLYEGTISRDQVAE  257 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~---~~~------~~--~~~~~~~~~i~~~Dva~  257 (296)
                        ..+.|+.+|.++|.+.+       ..+++++.++||++.++....   .+.      ..  ........+++++|+++
T Consensus       153 --~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  230 (260)
T PRK06198        153 --FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVAR  230 (260)
T ss_pred             --CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHH
Confidence              24569999999998765       247999999999998874211   000      00  00111234689999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEe
Q 022495          258 VAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++.++....  ..++++.+.+
T Consensus       231 ~~~~l~~~~~~~~~G~~~~~~~  252 (260)
T PRK06198        231 AVAFLLSDESGLMTGSVIDFDQ  252 (260)
T ss_pred             HHHHHcChhhCCccCceEeECC
Confidence            9998886543  2455555544

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.82  E-value=1e-18  Score=153.53  Aligned_cols=184  Identities=20%  Similarity=0.169  Sum_probs=129.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CC--CCCeEEEEcccCCCh-H---HHHHHhcC-
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KD--NPSLQIVKADVTEGS-A---KLSEAIGD-  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~--~~~~~~~~~D~~d~~-~---~~~~~~~~-  134 (296)
                      .+++++||||+|+||++++++|+++|++|++++|++++.++...   ..  ..++..+.+|+++.. +   .+.+.+++ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999999877654321   11  235778889998521 2   33444554 


Q ss_pred             CCCEEEEcCCCCCCC----CCcch--hH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 DSEAVVCATGFQPGW----DLFAP--WK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~----~~~~~--~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      ++|++|||||.....    .....  ..      .       +.+++.|++.+.++||++||...+... +         
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-~---------  201 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP-S---------  201 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-C---------
Confidence            366999999974321    11111  10      0       677788888777899999998654210 0         


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ....+.|+++|++.+.+.+       ..|++++++.||++.++.....     ...  ...++++++|+.++..+..
T Consensus       202 ~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-----~~~--~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        202 DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-----RSS--FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-----CCC--CCCCCHHHHHHHHHHHhCC
Confidence            1125679999999997764       3589999999999988753310     111  1146899999999999964

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.82  E-value=7.2e-19  Score=150.09  Aligned_cols=188  Identities=17%  Similarity=0.174  Sum_probs=125.2

Q ss_pred             cCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcc------hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLD------KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      ++++|+++||||+  ++||++++++|+++|++|++..|+.+      ...++.. ....+.++.+|++| .+++.++++.
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d-~~~v~~~~~~   80 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQD-DAQIEETFET   80 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCC-HHHHHHHHHH
Confidence            3568999999986  89999999999999999988866432      1222211 22346788999999 7777665532


Q ss_pred             ------CCCEEEEcCCCCCC----CCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCc
Q 022495          135 ------DSEAVVCATGFQPG----WDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       135 ------~~d~vv~~ag~~~~----~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~  187 (296)
                            ++|++|||||+...    ...    .+.+..             +.+++.+++.  ++||++||......    
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~----  154 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG--GSIVTLTYLGGVRA----  154 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC--CeEEEEeccccccC----
Confidence                  49999999996431    111    011111             6677777653  69999999753211    


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc----eeecc-c-CccccCCcCHHH
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN----IIMET-E-DTLYEGTISRDQ  254 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~----~~~~~-~-~~~~~~~i~~~D  254 (296)
                              ...+..|+.+|++.+.+.+       ..|++++.|.||.+.++.....    -.... . ......+..++|
T Consensus       155 --------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~d  226 (258)
T PRK07370        155 --------IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTE  226 (258)
T ss_pred             --------CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHH
Confidence                    1235679999999998765       2589999999999988642110    00000 0 001123567899


Q ss_pred             HHHHHHHHhcCC
Q 022495          255 VAEVAVEALLHP  266 (296)
Q Consensus       255 va~~i~~~l~~~  266 (296)
                      ++.++..++..+
T Consensus       227 va~~~~fl~s~~  238 (258)
T PRK07370        227 VGNTAAFLLSDL  238 (258)
T ss_pred             HHHHHHHHhChh
Confidence            999988887643

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-18  Score=148.92  Aligned_cols=200  Identities=16%  Similarity=0.153  Sum_probs=125.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc----hhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC-
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD----KAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      .+++|+++||||+|+||.++++.|+++|++|+++.++..    ...+.   +.....++.++++|++| .+.+.+++.. 
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~   83 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT-AAAVEKLFDDA   83 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC-HHHHHHHHHHH
Confidence            356789999999999999999999999999777765432    11111   11123468899999999 7877766542 


Q ss_pred             -----CCCEEEEcCCCCCCCC----CcchhHH---------HHHHHHHHHc--CCCEEEEE-ccc-eeccCccCccCChh
Q 022495          135 -----DSEAVVCATGFQPGWD----LFAPWKA---------INLVEACRKR--GVNRFILI-SSI-LVNGAAMGQILNPA  192 (296)
Q Consensus       135 -----~~d~vv~~ag~~~~~~----~~~~~~~---------~~~l~~~~~~--~~~~iV~~-SS~-~~~~~~~~~~~~~~  192 (296)
                           ++|++|||||......    ....+..         ..+++++...  ..++++++ ||. ..+.          
T Consensus        84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~----------  153 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT----------  153 (257)
T ss_pred             HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC----------
Confidence                 4999999999632111    1111111         3334444321  12467765 443 2221          


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeec--------ccCcc--ccCCcCHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME--------TEDTL--YEGTISRDQV  255 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~--------~~~~~--~~~~i~~~Dv  255 (296)
                          .....|+.+|++.+.+.+.       .++++++++||.+.++...+.....        .....  ...+.+++|+
T Consensus       154 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  229 (257)
T PRK12744        154 ----PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDI  229 (257)
T ss_pred             ----CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHH
Confidence                1245699999999987752       3799999999999876422110000        00001  1257889999


Q ss_pred             HHHHHHHhcCCC-CCCCeEEEEe
Q 022495          256 AEVAVEALLHPE-SSYKVVEIIS  277 (296)
Q Consensus       256 a~~i~~~l~~~~-~~~~~~~i~~  277 (296)
                      |+++..++.... ..+.++++.+
T Consensus       230 a~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        230 VPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             HHHHHHhhcccceeecceEeecC
Confidence            999988887422 2355666554

>PRK05599 hypothetical protein; Provisional

Probab=99.82  E-value=7.8e-19  Score=148.83  Aligned_cols=180  Identities=19%  Similarity=0.165  Sum_probs=126.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCC-CCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDN-PSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      |+++||||+++||.+++++|+ +|++|++++|+.++.++...   ... ..+.++.+|++| .+++.+++..      ++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD-LDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC-HHHHHHHHHHHHHhcCCC
Confidence            579999999999999999998 59999999999876654321   112 347889999999 7766654432      49


Q ss_pred             CEEEEcCCCCCCCC---Ccc--hhH-----H-------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWD---LFA--PWK-----A-------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~---~~~--~~~-----~-------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |++|||||......   ...  ...     .       +.+++.+++.+ .++||++||...+-..            ..
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------------~~  146 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR------------RA  146 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC------------cC
Confidence            99999999753211   000  000     0       35556676653 4699999998643211            12


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ...|+.+|++.+.+.+       ..+++++.+.||.+.++...+..   +.    .....++|+|++++.++....
T Consensus       147 ~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~---~~----~~~~~pe~~a~~~~~~~~~~~  215 (246)
T PRK05599        147 NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK---PA----PMSVYPRDVAAAVVSAITSSK  215 (246)
T ss_pred             CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC---CC----CCCCCHHHHHHHHHHHHhcCC
Confidence            4569999999987664       35899999999999886432110   00    113689999999999998754

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.82  E-value=3.3e-19  Score=157.12  Aligned_cols=166  Identities=18%  Similarity=0.259  Sum_probs=114.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.++..+...   ....++.++.+|++| .+++.++++.      
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999998776543321   123468899999999 7877766542      


Q ss_pred             CCCEEEEcCCCCCCC----C-CcchhH----H---------HHHHHHHHHcC--CCEEEEEccceeccCcc-Cc---c--
Q 022495          135 DSEAVVCATGFQPGW----D-LFAPWK----A---------INLVEACRKRG--VNRFILISSILVNGAAM-GQ---I--  188 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~----~-~~~~~~----~---------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~-~~---~--  188 (296)
                      ++|+||||||+....    . ..+.+.    +         +.+++.+++.+  .+|||++||...+.... +.   +  
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence            499999999964321    0 111111    1         55566666654  35999999987643211 00   0  


Q ss_pred             CCh-----------------hhhhhhhhHHHHHHHHHHHHHH----HH----hCCcEEEEecCcccC
Q 022495          189 LNP-----------------AYIFLNVFGLTLIAKLQAEQYI----RK----SGINYTIIRPGGLRN  230 (296)
Q Consensus       189 ~~~-----------------~~~~~~~~~~y~~sK~~~e~~~----~~----~~~~~~~lrp~~i~g  230 (296)
                      .+.                 ...+..+...|+.||.+.+.+.    ++    .|+++++++||.+++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  229 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD  229 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence            000                 0113456778999999876543    33    379999999999974

>PRK07069 short chain dehydrogenase; Validated

Probab=99.82  E-value=5.4e-19  Score=150.05  Aligned_cols=186  Identities=15%  Similarity=0.123  Sum_probs=127.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhcc---cCC--CCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTL---SKD--NPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~---~~~--~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++||||+|+||+++++.|+++|++|++++|+ .+...+..   ...  ...+.++.+|++| .+++.++++.      +
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD-EAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence            48999999999999999999999999999998 44333221   111  1234568899999 7777665532      3


Q ss_pred             CCEEEEcCCCCCCCCC----cchh-------------HHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPW-------------KAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~-------------~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    ....             ..+++++.+++.+.++||++||...+....            .
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~------------~  147 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP------------D  147 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC------------C
Confidence            8999999996542211    1111             017888888888788999999987664322            1


Q ss_pred             hHHHHHHHHHHHHHHHH-------h--CCcEEEEecCcccCCCCCCceee-cc--------cCccccCCcCHHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIRK-------S--GINYTIIRPGGLRNEPPTGNIIM-ET--------EDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~-------~--~~~~~~lrp~~i~g~~~~~~~~~-~~--------~~~~~~~~i~~~Dva~~i~  260 (296)
                      ...|+.+|.+.+.+.+.       .  +++++.|+||.+.++........ ..        .......+.+++|+|++++
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  227 (251)
T PRK07069        148 YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVL  227 (251)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHH
Confidence            34699999998877652       2  48999999999988753221100 00        0011123568999999998


Q ss_pred             HHhcCC
Q 022495          261 EALLHP  266 (296)
Q Consensus       261 ~~l~~~  266 (296)
                      .++..+
T Consensus       228 ~l~~~~  233 (251)
T PRK07069        228 YLASDE  233 (251)
T ss_pred             HHcCcc
Confidence            876654

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.8e-18  Score=148.85  Aligned_cols=187  Identities=18%  Similarity=0.211  Sum_probs=123.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CC-CCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KD-NPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~-~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      |+++||||+|+||.++++.|+++|++|++++|+++...+...   .. ...+.++.+|++| .+.+.+++..      ++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999998765443221   11 1234567899999 7776654432      48


Q ss_pred             CEEEEcCCCCCCCCCc--c--hhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF--A--PWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~--~--~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |+||||+|........  .  .+..             +.+++.+.+.+ .++||++||...+...            ..
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~------------~~  147 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL------------PW  147 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC------------CC
Confidence            9999999964321111  0  0000             44455554432 4699999998543211            12


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----cc------cCccccCCcCHHHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ET------EDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~~------~~~~~~~~i~~~Dva~~i~~  261 (296)
                      ...|+.+|.+.+.+.+       .+++++++|+||.+.++........    ..      ........++++|+|++++.
T Consensus       148 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~  227 (272)
T PRK07832        148 HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILA  227 (272)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHH
Confidence            3458899988876553       4689999999999988643211000    00      00112246899999999999


Q ss_pred             HhcCC
Q 022495          262 ALLHP  266 (296)
Q Consensus       262 ~l~~~  266 (296)
                      ++..+
T Consensus       228 ~~~~~  232 (272)
T PRK07832        228 GVEKN  232 (272)
T ss_pred             HHhcC
Confidence            99653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=1.1e-18  Score=148.03  Aligned_cols=187  Identities=16%  Similarity=0.221  Sum_probs=126.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCC-hHHHH-------H
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEG-SAKLS-------E  130 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~-~~~~~-------~  130 (296)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.++..++..    ....++.++.+|+++. .+.+.       +
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999765443221    1224677888888631 33333       3


Q ss_pred             HhcCCCCEEEEcCCCCCCCC---C--cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          131 AIGDDSEAVVCATGFQPGWD---L--FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       131 ~~~~~~d~vv~~ag~~~~~~---~--~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                      .+.. +|+||||||......   .  ...+.    .         +.+++.+++.+.++||++||...+...        
T Consensus        89 ~~~~-id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--------  159 (247)
T PRK08945         89 QFGR-LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR--------  159 (247)
T ss_pred             HhCC-CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC--------
Confidence            3344 999999998643211   1  11111    1         455556667777899999998643221        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                          .....|+.+|++++.+++.       .++++++++||.+.++.....+  +.  .....+..++|+++.+..++..
T Consensus       160 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~  231 (247)
T PRK08945        160 ----ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF--PG--EDPQKLKTPEDIMPLYLYLMGD  231 (247)
T ss_pred             ----CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc--Cc--ccccCCCCHHHHHHHHHHHhCc
Confidence                1134699999999987642       4799999999998775322111  11  1123478899999999997754


Q ss_pred             C
Q 022495          266 P  266 (296)
Q Consensus       266 ~  266 (296)
                      +
T Consensus       232 ~  232 (247)
T PRK08945        232 D  232 (247)
T ss_pred             c
Confidence            4

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.81  E-value=4.5e-18  Score=149.53  Aligned_cols=228  Identities=37%  Similarity=0.531  Sum_probs=157.9

Q ss_pred             hhccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           60 ENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        60 ~~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .....+.++|+|+||||.+|+.+++.|+++|+.|+++.|+.++....+.  ........+..|...+.+.+......   
T Consensus        73 ~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~  152 (411)
T KOG1203|consen   73 NNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK  152 (411)
T ss_pred             CCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence            3345567899999999999999999999999999999999988776543  12345566666666533444444433   


Q ss_pred             CCCEEEEcCCCCCCCC-Cc----chhH-HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHH
Q 022495          135 DSEAVVCATGFQPGWD-LF----APWK-AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQ  208 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~-~~----~~~~-~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~  208 (296)
                      ...+++-|+|..+..+ ..    ..|. .+|++++|+..|++|+|++||+..-..      ...+........+...|..
T Consensus       153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~------~~~~~~~~~~~~~~~~k~~  226 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKF------NQPPNILLLNGLVLKAKLK  226 (411)
T ss_pred             cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCccc------CCCchhhhhhhhhhHHHHh
Confidence            1446777777655442 11    1222 299999999999999999999853221      1222222224456689999


Q ss_pred             HHHHHHHhCCcEEEEecCcccCCCCCCceeecc-cC-----ccccCCcCHHHHHHHHHHHhcCCCCCC-CeEEEEeCCCC
Q 022495          209 AEQYIRKSGINYTIIRPGGLRNEPPTGNIIMET-ED-----TLYEGTISRDQVAEVAVEALLHPESSY-KVVEIISRVDA  281 (296)
Q Consensus       209 ~e~~~~~~~~~~~~lrp~~i~g~~~~~~~~~~~-~~-----~~~~~~i~~~Dva~~i~~~l~~~~~~~-~~~~i~~~~~~  281 (296)
                      +|+++++.|+++++||||............... ..     ......+.+.|+|+.+++++.++.... ++.++....++
T Consensus       227 ~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~g  306 (411)
T KOG1203|consen  227 AEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVLKPEG  306 (411)
T ss_pred             HHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEEeecCCCC
Confidence            999999999999999999887654333222111 11     111237899999999999999887655 66777777777


Q ss_pred             CCCCHHHHHHHh
Q 022495          282 PKRSYEDLFGSI  293 (296)
Q Consensus       282 ~~~~~~el~~~i  293 (296)
                      ....+.++.+.+
T Consensus       307 pg~~~~~l~~~~  318 (411)
T KOG1203|consen  307 PGRPYKVLLELF  318 (411)
T ss_pred             CCccHHHHHhhc
Confidence            777777776654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.81  E-value=1.5e-18  Score=146.48  Aligned_cols=198  Identities=17%  Similarity=0.219  Sum_probs=131.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-Ccchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      |++|||||+|+||+++++.|+++|++|+++.| ++....+..   .....++.++.+|++| .+.+.+++++      ++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999988 443332221   1123568899999999 7776655532      49


Q ss_pred             CEEEEcCCCCCCCC----CcchhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWD----LFAPWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~----~~~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||+|......    ....+.      .       +.+++.+++.+.++||++||.......            ..+
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~~~  147 (242)
T TIGR01829        80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ------------FGQ  147 (242)
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC------------CCc
Confidence            99999998643211    111110      0       557777888888899999997543211            124


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---eec-ccCccccCCcCHHHHHHHHHHHhcCCC-
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---IME-TEDTLYEGTISRDQVAEVAVEALLHPE-  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~~~-~~~~~~~~~i~~~Dva~~i~~~l~~~~-  267 (296)
                      ..|+.+|.+.+.+++       ..+++++.++||++.++......   ... ........+..++|+++++..++.++. 
T Consensus       148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  227 (242)
T TIGR01829       148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAG  227 (242)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            568999998876553       35899999999999886532110   000 000111235678999999877765532 


Q ss_pred             -CCCCeEEEEe
Q 022495          268 -SSYKVVEIIS  277 (296)
Q Consensus       268 -~~~~~~~i~~  277 (296)
                       ..|+.+.+.+
T Consensus       228 ~~~G~~~~~~g  238 (242)
T TIGR01829       228 YITGATLSING  238 (242)
T ss_pred             CccCCEEEecC
Confidence             3455666554

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=1e-18  Score=149.37  Aligned_cols=196  Identities=19%  Similarity=0.232  Sum_probs=126.5

Q ss_pred             CCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcc---hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||++  +||+++++.|+++|++|++.+|+..   ..+++.. ....+.++.+|++| .+++.+++..    
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   81 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAA-QLGSDIVLPCDVAE-DASIDAMFAELGKV   81 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHh-ccCCceEeecCCCC-HHHHHHHHHHHHhh
Confidence            4689999999985  9999999999999999998888731   1222221 22456788999999 7777766532    


Q ss_pred             --CCCEEEEcCCCCCCCC---------CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCC
Q 022495          135 --DSEAVVCATGFQPGWD---------LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~---------~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                        ++|++|||||+.....         ..+.+..             +.+++.++ .+ ++||++||.+....       
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-g~Iv~iss~~~~~~-------  152 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-PG-SALLTLSYLGAERA-------  152 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-CC-cEEEEEecCCCCCC-------
Confidence              4999999999643211         0011111             33333222 23 68999999753211       


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee----ecc--cCccccCCcCHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----MET--EDTLYEGTISRDQVAE  257 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~----~~~--~~~~~~~~i~~~Dva~  257 (296)
                           ...+..|+++|.+.+.+.+       ..+++++.|.||.+.++.......    ...  .......+..++|+|+
T Consensus       153 -----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~  227 (262)
T PRK07984        153 -----IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGN  227 (262)
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHH
Confidence                 1124579999999998765       258999999999998853211000    000  0011134678999999


Q ss_pred             HHHHHhcCCC--CCCCeEEE
Q 022495          258 VAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i  275 (296)
                      +++.++....  ..+..+.+
T Consensus       228 ~~~~L~s~~~~~itG~~i~v  247 (262)
T PRK07984        228 SAAFLCSDLSAGISGEVVHV  247 (262)
T ss_pred             HHHHHcCcccccccCcEEEE
Confidence            9988886532  23444444

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.81  E-value=3.4e-18  Score=132.20  Aligned_cols=199  Identities=22%  Similarity=0.297  Sum_probs=143.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |||.|+||||.+|+++++++.+||++|+++.|++.+....     ..+.+++.|+.| ..++.+.+.+ .|+||..-|..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----~~~~i~q~Difd-~~~~a~~l~g-~DaVIsA~~~~   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----QGVTILQKDIFD-LTSLASDLAG-HDAVISAFGAG   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----ccceeecccccC-hhhhHhhhcC-CceEEEeccCC
Confidence            6899999999999999999999999999999999887532     578899999999 8888999999 99999877654


Q ss_pred             C-CCCCcchhHHHHHHHHHHHcCCCEEEEEcccee-ccCccCccCChhhhhhhhhHHHHHHHHHHH--HHHH-HhCCcEE
Q 022495          147 P-GWDLFAPWKAINLVEACRKRGVNRFILISSILV-NGAAMGQILNPAYIFLNVFGLTLIAKLQAE--QYIR-KSGINYT  221 (296)
Q Consensus       147 ~-~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~-~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e--~~~~-~~~~~~~  221 (296)
                      . +.+.......+.+++..+..++.|++.++..+. |-+......+.   |.-|...|..++..+|  +.++ +..++||
T Consensus        74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~---p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WT  150 (211)
T COG2910          74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDT---PDFPAEYKPEALAQAEFLDSLRAEKSLDWT  150 (211)
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecC---CCCchhHHHHHHHHHHHHHHHhhccCcceE
Confidence            2 222222223388889899989999999987753 32222222222   1222333455666666  3344 4569999


Q ss_pred             EEecCcccCCCCC-CceeecccC----ccccCCcCHHHHHHHHHHHhcCCCCCCCeEEE
Q 022495          222 IIRPGGLRNEPPT-GNIIMETED----TLYEGTISRDQVAEVAVEALLHPESSYKVVEI  275 (296)
Q Consensus       222 ~lrp~~i~g~~~~-~~~~~~~~~----~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i  275 (296)
                      .|.|..++.|... +.+...+..    ....++|+.+|.|.+++..++.+....+.+.+
T Consensus       151 fvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv  209 (211)
T COG2910         151 FVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTV  209 (211)
T ss_pred             EeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeee
Confidence            9999988877433 444333221    11135899999999999999999876655544

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.6e-18  Score=151.29  Aligned_cols=195  Identities=15%  Similarity=0.102  Sum_probs=128.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc----------hhhh---cccCCCCCeEEEEcccCCChHHH
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD----------KAKT---TLSKDNPSLQIVKADVTEGSAKL  128 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~---~~~~~~~~~~~~~~D~~d~~~~~  128 (296)
                      +++++|+++||||+++||+++++.|+++|++|++++|+..          ...+   .+.....++.++++|++| .+++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v   82 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV-PEQV   82 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHH
Confidence            3467899999999999999999999999999999999742          2211   111123457889999999 7776


Q ss_pred             HHHhcC------CCCEEEEcC-CCCC--C--C---CC-cchhH------H-------HHHHHHHHHcCCCEEEEEcccee
Q 022495          129 SEAIGD------DSEAVVCAT-GFQP--G--W---DL-FAPWK------A-------INLVEACRKRGVNRFILISSILV  180 (296)
Q Consensus       129 ~~~~~~------~~d~vv~~a-g~~~--~--~---~~-~~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~  180 (296)
                      .++++.      ++|++|||| |...  .  .   +. ...+.      .       +.+++.+++.+.++||++||...
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence            655532      499999999 7421  0  1   10 01110      0       67777777665579999999643


Q ss_pred             ccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-----ee-cc--cCcc
Q 022495          181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----IM-ET--EDTL  245 (296)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-----~~-~~--~~~~  245 (296)
                      .-...         +......|+.+|++...+.+       ..|++++.|.||.+.++......     .. ..  ....
T Consensus       163 ~~~~~---------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~  233 (305)
T PRK08303        163 EYNAT---------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPH  233 (305)
T ss_pred             cccCc---------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccc
Confidence            11100         01124569999999987764       35899999999999876421100     00 00  0011


Q ss_pred             ccCCcCHHHHHHHHHHHhcCC
Q 022495          246 YEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       246 ~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ...+..++|+|++++.++.++
T Consensus       234 ~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        234 FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             cccCCCHHHHHHHHHHHHcCc
Confidence            122357899999999888765

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.81  E-value=4.3e-18  Score=146.32  Aligned_cols=205  Identities=25%  Similarity=0.301  Sum_probs=158.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      ++|+||||||++|++++++|+++|++|+++.|+++......    .++++..+|+.| .+.+...+++ .|.++++.+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~-~~~l~~a~~G-~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----GGVEVVLGDLRD-PKSLVAGAKG-VDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----CCcEEEEeccCC-HhHHHHHhcc-ccEEEEEeccc
Confidence            47999999999999999999999999999999998877654    789999999999 8999999999 99999998765


Q ss_pred             CCCCC-cchhHHHHHHHHHHHcC--CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEE
Q 022495          147 PGWDL-FAPWKAINLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTII  223 (296)
Q Consensus       147 ~~~~~-~~~~~~~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~l  223 (296)
                      . ... ........++..+++.+  +++++++|...+...              ....|..+|...|..+...|+.++++
T Consensus        75 ~-~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~--------------~~~~~~~~~~~~e~~l~~sg~~~t~l  139 (275)
T COG0702          75 D-GSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA--------------SPSALARAKAAVEAALRSSGIPYTTL  139 (275)
T ss_pred             c-cccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCC--------------CccHHHHHHHHHHHHHHhcCCCeEEE
Confidence            4 332 22223355666666644  778999988753221              13458899999999999999999999


Q ss_pred             ecCcccCCCCCCce--------eecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          224 RPGGLRNEPPTGNI--------IMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       224 rp~~i~g~~~~~~~--------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |+..++........        ...........++..+|++.++...+..+...+++|.+.+   +...+..|+.+.+.+
T Consensus       140 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g---~~~~~~~~~~~~l~~  216 (275)
T COG0702         140 RRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAG---PEALTLAELASGLDY  216 (275)
T ss_pred             ecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccC---CceecHHHHHHHHHH
Confidence            97666654322210        0011111135689999999999999998888889999998   578999998887753

>TIGR02415 23BDH acetoin reductases

Probab=99.81  E-value=2.5e-18  Score=146.24  Aligned_cols=188  Identities=19%  Similarity=0.173  Sum_probs=128.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      |+++||||+|+||.+++++|+++|++|+++.|+.+...+..   .....++.++.+|++| .+++.+++..      ++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCCC
Confidence            57999999999999999999999999999999866544322   1134568899999999 7877766532      389


Q ss_pred             EEEEcCCCCCCCC--C--cchhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          138 AVVCATGFQPGWD--L--FAPWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       138 ~vv~~ag~~~~~~--~--~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      +||||||......  .  ...+..             +.+++.+++.+ .+++|++||.......            ...
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~  147 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN------------PIL  147 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC------------CCC
Confidence            9999999743211  1  111101             35566666654 3699999997543211            124


Q ss_pred             HHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee-------e--cc------cCccccCCcCHHHHHH
Q 022495          200 GLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII-------M--ET------EDTLYEGTISRDQVAE  257 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~-------~--~~------~~~~~~~~i~~~Dva~  257 (296)
                      +.|+.+|++.+.+++.       .++++++|+||.+.++.......       .  ..      .......+.+++|+++
T Consensus       148 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  227 (254)
T TIGR02415       148 SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAG  227 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHH
Confidence            5699999999887652       47999999999987764221100       0  00      0001123688999999


Q ss_pred             HHHHHhcCCC
Q 022495          258 VAVEALLHPE  267 (296)
Q Consensus       258 ~i~~~l~~~~  267 (296)
                      ++..++..+.
T Consensus       228 ~~~~l~~~~~  237 (254)
T TIGR02415       228 LVSFLASEDS  237 (254)
T ss_pred             HHHhhccccc
Confidence            9988887653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.80  E-value=5.4e-18  Score=142.71  Aligned_cols=195  Identities=18%  Similarity=0.171  Sum_probs=127.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhh---cccCCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      ++|||++|+||+++++.|+++|++|++++|+. +....   .......++.++.+|++| .+.+.+++.+      ++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSD-REDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999999875 22221   111123468899999999 7777666543      3899


Q ss_pred             EEEcCCCCCCCCC----cchhH----H-----HHHHHHH----HHcCCCEEEEEcccee-ccCccCccCChhhhhhhhhH
Q 022495          139 VVCATGFQPGWDL----FAPWK----A-----INLVEAC----RKRGVNRFILISSILV-NGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       139 vv~~ag~~~~~~~----~~~~~----~-----~~~l~~~----~~~~~~~iV~~SS~~~-~~~~~~~~~~~~~~~~~~~~  200 (296)
                      |||++|.......    .....    .     .++++++    .+.+.++||++||... |+..             ...
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-------------~~~  146 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA-------------GQA  146 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-------------CCc
Confidence            9999996432110    01111    0     3344444    3455679999999754 3321             135


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--e--cccCccccCCcCHHHHHHHHHHHhcCC--C
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--M--ETEDTLYEGTISRDQVAEVAVEALLHP--E  267 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--~--~~~~~~~~~~i~~~Dva~~i~~~l~~~--~  267 (296)
                      .|+.+|.+.+.+++       ..++++++++||.+.++.......  .  .........+.+++|++++++.++...  .
T Consensus       147 ~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~  226 (239)
T TIGR01830       147 NYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASY  226 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCC
Confidence            68899998876653       258999999999887653221100  0  000111234678999999998888543  3


Q ss_pred             CCCCeEEEEe
Q 022495          268 SSYKVVEIIS  277 (296)
Q Consensus       268 ~~~~~~~i~~  277 (296)
                      ..++++++.+
T Consensus       227 ~~g~~~~~~~  236 (239)
T TIGR01830       227 ITGQVIHVDG  236 (239)
T ss_pred             cCCCEEEeCC
Confidence            4567777754

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=3.7e-18  Score=145.91  Aligned_cols=188  Identities=12%  Similarity=0.159  Sum_probs=122.6

Q ss_pred             cCCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcc---hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+++|+++||||++  +||+++++.|+++|++|++.+|+..   ...++.. ......++++|++| .+++.++++.   
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~-~~g~~~~~~~Dv~~-~~~v~~~~~~~~~   82 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAE-EIGCNFVSELDVTN-PKSISNLFDDIKE   82 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHH-hcCCceEEEccCCC-HHHHHHHHHHHHH
Confidence            35689999999997  8999999999999999999888742   1222211 11223467899999 7777665532   


Q ss_pred             ---CCCEEEEcCCCCCC------C-C-CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCC
Q 022495          135 ---DSEAVVCATGFQPG------W-D-LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~------~-~-~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                         ++|++|||||....      . + ..+.+..             +.+++.+++.  ++||++||......       
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~-------  153 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG--GSIVTLTYYGAEKV-------  153 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC--ceEEEEecCccccC-------
Confidence               59999999996431      0 1 0111111             4444555432  59999999754211       


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC--c---eeeccc-CccccCCcCHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG--N---IIMETE-DTLYEGTISRDQVAE  257 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~--~---~~~~~~-~~~~~~~i~~~Dva~  257 (296)
                           ...+..|+.+|++.+.+.+       ..+++++.|.||.+.++....  .   ...... ......+..++|+|+
T Consensus       154 -----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~  228 (260)
T PRK06603        154 -----IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGG  228 (260)
T ss_pred             -----CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHH
Confidence                 1124569999999987764       368999999999998764211  0   000000 001123578999999


Q ss_pred             HHHHHhcCC
Q 022495          258 VAVEALLHP  266 (296)
Q Consensus       258 ~i~~~l~~~  266 (296)
                      +++.++...
T Consensus       229 ~~~~L~s~~  237 (260)
T PRK06603        229 AAVYLFSEL  237 (260)
T ss_pred             HHHHHhCcc
Confidence            999888653

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.1e-17  Score=141.50  Aligned_cols=177  Identities=16%  Similarity=0.130  Sum_probs=120.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +.+++|+++||||+|+||+++++.|+++|++|++++|+.....+...  .....++.+|++| .+.+.+.+++ +|++||
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~-~~~~~~~~~~-iDilVn   85 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGK-EESLDKQLAS-LDVLIL   85 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCC-HHHHHHhcCC-CCEEEE
Confidence            45678999999999999999999999999999999998632211111  1123678899999 8989988888 999999


Q ss_pred             cCCCCCCCCC-cchhHH-------------HHHHHHHHHc---CCCEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          142 ATGFQPGWDL-FAPWKA-------------INLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       142 ~ag~~~~~~~-~~~~~~-------------~~~l~~~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      |||.....+. .+.+..             +.+++.+++.   +.+.++..||......             .....|++
T Consensus        86 nAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-------------~~~~~Y~a  152 (245)
T PRK12367         86 NHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-------------ALSPSYEI  152 (245)
T ss_pred             CCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-------------CCCchhHH
Confidence            9997432221 111111             6666666553   1223444445432211             01345999


Q ss_pred             HHHHHHHHH---H-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          205 AKLQAEQYI---R-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       205 sK~~~e~~~---~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +|++.+.+.   +       +.++.++.+.||.+.++..          .  ...++++|+|+.++.++....
T Consensus       153 SKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~----------~--~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        153 SKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN----------P--IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC----------c--cCCCCHHHHHHHHHHHHhcCC
Confidence            999975322   1       3588899999998866531          0  125789999999999997653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=2.6e-18  Score=146.49  Aligned_cols=196  Identities=16%  Similarity=0.145  Sum_probs=128.0

Q ss_pred             CCCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEcCc--chhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDL--DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++|+++||||  +++||.++++.|+++|++|++.+|+.  +..++........+.++.+|++| .+++.++++.     
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~   83 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV   83 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence            56899999999  89999999999999999999998764  22232221122357889999999 7776665432     


Q ss_pred             -CCCEEEEcCCCCCC------CCC--cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          135 -DSEAVVCATGFQPG------WDL--FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 -~~d~vv~~ag~~~~------~~~--~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                       ++|++|||||+...      ...  .+.+.    +         +.+++.+++.  ++||++|+....           
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~--g~Iv~is~~~~~-----------  150 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG--GSIVGLDFDATV-----------  150 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC--ceEEEEeecccc-----------
Confidence             49999999997531      001  11111    1         5566666543  589998764211           


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-----cCcccc--CCcCHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----EDTLYE--GTISRDQVAEV  258 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-----~~~~~~--~~i~~~Dva~~  258 (296)
                        +...+..|+.+|++.+.+.+       ..|++++.|.||.+.++..........     ......  .+..++|+|++
T Consensus       151 --~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~  228 (256)
T PRK07889        151 --AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARA  228 (256)
T ss_pred             --cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHH
Confidence              01235668999999987764       368999999999998864221100000     001111  35789999999


Q ss_pred             HHHHhcCCC--CCCCeEEE
Q 022495          259 AVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i  275 (296)
                      ++.++....  ..+.++.+
T Consensus       229 v~~l~s~~~~~~tG~~i~v  247 (256)
T PRK07889        229 VVALLSDWFPATTGEIVHV  247 (256)
T ss_pred             HHHHhCcccccccceEEEE
Confidence            998887543  24444444

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.3e-18  Score=142.83  Aligned_cols=170  Identities=15%  Similarity=0.150  Sum_probs=121.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC---CCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~d~vv~~a  143 (296)
                      |+++||||+|+||+++++.|+++|++|++++|+.++..+...  ..++.++++|++| .+.+.++++.   ++|++||||
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~~D~~~-~~~v~~~~~~~~~~id~lv~~a   77 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK--ELDVDAIVCDNTD-PASLEEARGLFPHHLDTIVNVP   77 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--hccCcEEecCCCC-HHHHHHHHHHHhhcCcEEEECC
Confidence            379999999999999999999999999999999876654332  1246789999999 8888877652   389999999


Q ss_pred             CCCCC------CC---CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          144 GFQPG------WD---LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       144 g~~~~------~~---~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      |....      ..   ..+.+..             +.+++.+++.  ++||++||...                .....
T Consensus        78 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--g~Iv~isS~~~----------------~~~~~  139 (223)
T PRK05884         78 APSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSG--GSIISVVPENP----------------PAGSA  139 (223)
T ss_pred             CccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CeEEEEecCCC----------------CCccc
Confidence            84211      00   1111111             5666666543  69999998640                01356


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      |+.+|++.+.+.+       ..+++++.|.||++.++.....      ..  .+...++|+++.+..++..
T Consensus       140 Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~------~~--~p~~~~~~ia~~~~~l~s~  202 (223)
T PRK05884        140 EAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL------SR--TPPPVAAEIARLALFLTTP  202 (223)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc------cC--CCCCCHHHHHHHHHHHcCc
Confidence            9999999987764       3689999999999987642110      00  1123789999998887764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=4.6e-18  Score=146.21  Aligned_cols=187  Identities=14%  Similarity=0.154  Sum_probs=122.4

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCc---chhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDL---DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||+  ++||+++++.|+++|++|++..|+.   +...++.. .......+++|++| .++++++++.    
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~-~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAA-ELGAFVAGHCDVTD-EASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHH-hcCCceEEecCCCC-HHHHHHHHHHHHHh
Confidence            457999999997  8999999999999999999888763   22222221 11235678999999 7777765542    


Q ss_pred             --CCCEEEEcCCCCCC----CC--Cc--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          135 --DSEAVVCATGFQPG----WD--LF--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 --~~d~vv~~ag~~~~----~~--~~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                        ++|++|||||+...    ..  ..  +.+..             +.+++.+++  -++||++||......        
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~--------  155 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKV--------  155 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccC--------
Confidence              49999999997531    00  00  11111             344444433  269999998753211        


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc--e--eecc--cCccccCCcCHHHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN--I--IMET--EDTLYEGTISRDQVAEV  258 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~--~--~~~~--~~~~~~~~i~~~Dva~~  258 (296)
                          ...+..|+.+|++.+.+.+       ..++++++|.||.+.++.....  .  ....  .......+..++|+|++
T Consensus       156 ----~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~  231 (272)
T PRK08159        156 ----MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDS  231 (272)
T ss_pred             ----CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHH
Confidence                1225679999999987765       3589999999999987532110  0  0000  00111235789999999


Q ss_pred             HHHHhcCC
Q 022495          259 AVEALLHP  266 (296)
Q Consensus       259 i~~~l~~~  266 (296)
                      ++.++...
T Consensus       232 ~~~L~s~~  239 (272)
T PRK08159        232 ALYLLSDL  239 (272)
T ss_pred             HHHHhCcc
Confidence            98888643

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.79  E-value=7.3e-18  Score=143.75  Aligned_cols=195  Identities=17%  Similarity=0.129  Sum_probs=131.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc------CCCCCeEEEEcccCCChHHHHHHhc--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS------KDNPSLQIVKADVTEGSAKLSEAIG--  133 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~~--  133 (296)
                      ..+.+|+++||||+.+||+++|++|++.|++|++.+|+.+...+...      ....++..+.+|+++ .+..++++.  
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~   82 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFA   82 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHH
Confidence            35679999999999999999999999999999999999876543221      123568999999998 544433321  


Q ss_pred             -----CCCCEEEEcCCCCCCCC-----CcchhHH--------------HHHHHHHHHcCCCEEEEEccceeccCccCccC
Q 022495          134 -----DDSEAVVCATGFQPGWD-----LFAPWKA--------------INLVEACRKRGVNRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       134 -----~~~d~vv~~ag~~~~~~-----~~~~~~~--------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~  189 (296)
                           +++|++|||||......     ..+.+..              +.+.+.+++.+.+.|+++||...+.....   
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~---  159 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG---  159 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC---
Confidence                 25999999999654321     1111111              33334445545679999999875433211   


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee------c----ccCc-cccCCcC
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM------E----TEDT-LYEGTIS  251 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~------~----~~~~-~~~~~i~  251 (296)
                             . ...|+.+|.+.+++.+       ++|+|+++|.||.+.++........      .    .... .......
T Consensus       160 -------~-~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~  231 (270)
T KOG0725|consen  160 -------S-GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGT  231 (270)
T ss_pred             -------C-cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccC
Confidence                   0 1469999999998875       4699999999999998761111100      0    0011 1233567


Q ss_pred             HHHHHHHHHHHhcCCCC
Q 022495          252 RDQVAEVAVEALLHPES  268 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~~~  268 (296)
                      ++|++..+..+..+...
T Consensus       232 ~~eva~~~~fla~~~as  248 (270)
T KOG0725|consen  232 PEEVAEAAAFLASDDAS  248 (270)
T ss_pred             HHHHHHhHHhhcCcccc
Confidence            89999997777766543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.79  E-value=1.7e-17  Score=148.63  Aligned_cols=178  Identities=16%  Similarity=0.185  Sum_probs=123.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++++|+++||||+|+||++++++|+++|++|++++|++++..+........+..+.+|++| .+.+.+.+++ +|++||
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd-~~~v~~~l~~-IDiLIn  251 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ-EAALAELLEK-VDILII  251 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC-HHHHHHHhCC-CCEEEE
Confidence            35678999999999999999999999999999999998766543332222357788999999 8999999988 999999


Q ss_pred             cCCCCCCCCCc-chh----H--H-------HHHHHHHHHcCC----CEEEEEccceeccCccCccCChhhhhhhhhHHHH
Q 022495          142 ATGFQPGWDLF-APW----K--A-------INLVEACRKRGV----NRFILISSILVNGAAMGQILNPAYIFLNVFGLTL  203 (296)
Q Consensus       142 ~ag~~~~~~~~-~~~----~--~-------~~~l~~~~~~~~----~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~  203 (296)
                      |||.....+.. +..    .  .       +.+++.+++.+.    ..+|++|+.. ..        +     .....|+
T Consensus       252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~--------~-----~~~~~Y~  317 (406)
T PRK07424        252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-VN--------P-----AFSPLYE  317 (406)
T ss_pred             CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-cc--------C-----CCchHHH
Confidence            99965322111 111    1  1       666666666542    2355555421 10        0     0134699


Q ss_pred             HHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          204 IAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       204 ~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ++|++.+.+..    +.++.+..+.||.+.++..            ..+.++++|+|+.++.++..+.
T Consensus       318 ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~------------~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        318 LSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLN------------PIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCC------------cCCCCCHHHHHHHHHHHHHCCC
Confidence            99999987542    2456677777777654321            1135899999999999997654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.2e-18  Score=137.95  Aligned_cols=174  Identities=21%  Similarity=0.226  Sum_probs=119.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv~~ag  144 (296)
                      |+++||||+|+||.++++.|+++ ++|++++|+..              .+++|++| .+.++++++.  ++|+||||||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------~~~~D~~~-~~~~~~~~~~~~~id~lv~~ag   64 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------DVQVDITD-PASIRALFEKVGKVDAVVSAAG   64 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------ceEecCCC-hHHHHHHHHhcCCCCEEEECCC
Confidence            47999999999999999999999 99999988742              36799999 8888877764  5999999999


Q ss_pred             CCCCCC----CcchhH------H---HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHH
Q 022495          145 FQPGWD----LFAPWK------A---INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       145 ~~~~~~----~~~~~~------~---~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~  209 (296)
                      ......    ....+.      .   .++++++...  +.++|+++||......            ......|+.+|++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~------------~~~~~~Y~~sK~a~  132 (199)
T PRK07578         65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP------------IPGGASAATVNGAL  132 (199)
T ss_pred             CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC------------CCCchHHHHHHHHH
Confidence            643211    111111      0   3334433221  2358999998764321            11246799999998


Q ss_pred             HHHHH------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEE
Q 022495          210 EQYIR------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVE  274 (296)
Q Consensus       210 e~~~~------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~  274 (296)
                      +.+.+      ..+++++.|+||++.++.....-.++     ...+++++|+|+.+..++... ..+++++
T Consensus       133 ~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~~~~~~-----~~~~~~~~~~a~~~~~~~~~~-~~g~~~~  197 (199)
T PRK07578        133 EGFVKAAALELPRGIRINVVSPTVLTESLEKYGPFFP-----GFEPVPAARVALAYVRSVEGA-QTGEVYK  197 (199)
T ss_pred             HHHHHHHHHHccCCeEEEEEcCCcccCchhhhhhcCC-----CCCCCCHHHHHHHHHHHhccc-eeeEEec
Confidence            87664      25899999999999775321110011     124689999999999888754 3444544

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5.7e-18  Score=141.69  Aligned_cols=178  Identities=11%  Similarity=0.050  Sum_probs=123.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhc------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG------  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~------  133 (296)
                      ++++|+++||||+++||++++++|+++|++|++.+|+.++.++...   ....++..+.+|++| .+++.++++      
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   80 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQF   80 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999999999999876654321   123567888999999 777765542      


Q ss_pred             C-CCCEEEEcCCCCCC---CCCc--chhH-H------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhh
Q 022495          134 D-DSEAVVCATGFQPG---WDLF--APWK-A------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       134 ~-~~d~vv~~ag~~~~---~~~~--~~~~-~------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                      + ++|++|||||....   ....  ..+. .            +.+++.+++.+ .++||++||...+            
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------  148 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------------  148 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC------------
Confidence            1 49999999974321   1111  1111 0            55667776654 4699999996422            


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcC-HHHHHHHHHHHhcC
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTIS-RDQVAEVAVEALLH  265 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~-~~Dva~~i~~~l~~  265 (296)
                         .++..|+.+|++.+.+.+       .++++++.|.||++.++....       ..   .|.. .+|++.+...++.+
T Consensus       149 ---~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~-------~~---~~~~~~~~~~~~~~~l~~~  215 (227)
T PRK08862        149 ---QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD-------AV---HWAEIQDELIRNTEYIVAN  215 (227)
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC-------HH---HHHHHHHHHHhheeEEEec
Confidence               114568999999987764       368999999999998862110       00   1111 27888887777754


Q ss_pred             C
Q 022495          266 P  266 (296)
Q Consensus       266 ~  266 (296)
                      +
T Consensus       216 ~  216 (227)
T PRK08862        216 E  216 (227)
T ss_pred             c
Confidence            3

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=6e-18  Score=144.57  Aligned_cols=187  Identities=16%  Similarity=0.193  Sum_probs=122.4

Q ss_pred             CCCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEcC---cchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRD---LDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||  +++||++++++|+++|++|++.+|.   .+...++.. ......++.+|++| .+++.++++.    
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAA-EFGSDLVFPCDVAS-DEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHH-hcCCcceeeccCCC-HHHHHHHHHHHHHH
Confidence            46799999996  6899999999999999999987654   233332221 11233568899999 7777665532    


Q ss_pred             --CCCEEEEcCCCCCCC-------CCcc--hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCC
Q 022495          135 --DSEAVVCATGFQPGW-------DLFA--PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~-------~~~~--~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                        ++|++|||||.....       +...  .+..             +.+++.+++  .++||++||......       
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~-------  152 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERV-------  152 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccC-------
Confidence              499999999975321       1011  1111             556666643  268999999754211       


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-----cCc-cccCCcCHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----EDT-LYEGTISRDQVAE  257 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-----~~~-~~~~~i~~~Dva~  257 (296)
                           ...+..|+.+|++.+.+.+       .++++++.|.||.+.++..........     ... ....+..++|+|+
T Consensus       153 -----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~  227 (260)
T PRK06997        153 -----VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGN  227 (260)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHH
Confidence                 1124569999999987765       358999999999998854221000000     000 1123578999999


Q ss_pred             HHHHHhcCC
Q 022495          258 VAVEALLHP  266 (296)
Q Consensus       258 ~i~~~l~~~  266 (296)
                      ++..++..+
T Consensus       228 ~~~~l~s~~  236 (260)
T PRK06997        228 VAAFLLSDL  236 (260)
T ss_pred             HHHHHhCcc
Confidence            988888653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.79  E-value=5.5e-18  Score=148.69  Aligned_cols=202  Identities=16%  Similarity=0.212  Sum_probs=131.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ++++++||||+++||.++++.|+++| ++|++++|+.++..+..   ......+.++.+|++| .+++.+++..      
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 99999999876654322   1123467889999999 7776655432      


Q ss_pred             CCCEEEEcCCCCCCC-C----CcchhHH-------------HHHHHHHHHcC--CCEEEEEccceeccCccCc----cC-
Q 022495          135 DSEAVVCATGFQPGW-D----LFAPWKA-------------INLVEACRKRG--VNRFILISSILVNGAAMGQ----IL-  189 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~-~----~~~~~~~-------------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~----~~-  189 (296)
                      ++|++|||||+.... .    ..+.+..             +.+++.+++.+  .++||++||...+....+.    .. 
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            499999999964321 1    1111111             66788887663  4699999999775321100    00 


Q ss_pred             -C---------------hhhhhhhhhHHHHHHHHHHHHHHH----H----hCCcEEEEecCccc-CCCCCCcee-----e
Q 022495          190 -N---------------PAYIFLNVFGLTLIAKLQAEQYIR----K----SGINYTIIRPGGLR-NEPPTGNII-----M  239 (296)
Q Consensus       190 -~---------------~~~~~~~~~~~y~~sK~~~e~~~~----~----~~~~~~~lrp~~i~-g~~~~~~~~-----~  239 (296)
                       .               ....+..+...|+.||++...+.+    +    .+++++.|+||.+. ++.......     .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~  240 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF  240 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence             0               001123456789999999765432    2    37999999999984 544322110     0


Q ss_pred             ccc-CccccCCcCHHHHHHHHHHHhcCCC
Q 022495          240 ETE-DTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       240 ~~~-~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ... .....++.++++.|+.++.++..+.
T Consensus       241 ~~~~~~~~~~~~~~~~~a~~l~~~~~~~~  269 (314)
T TIGR01289       241 PPFQKYITKGYVSEEEAGERLAQVVSDPK  269 (314)
T ss_pred             HHHHHHHhccccchhhhhhhhHHhhcCcc
Confidence            000 0001236789999999998887643

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.78  E-value=1.2e-17  Score=156.60  Aligned_cols=189  Identities=15%  Similarity=0.175  Sum_probs=131.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      ++|+++||||+++||.++++.|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.      ++|+
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCCE
Confidence            57899999999999999999999999999999999877655443234567889999999 7776665532      4999


Q ss_pred             EEEcCCCCCC-----CC-CcchhHH-------------HHHHHHHHHcCCC-EEEEEccceeccCccCccCChhhhhhhh
Q 022495          139 VVCATGFQPG-----WD-LFAPWKA-------------INLVEACRKRGVN-RFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       139 vv~~ag~~~~-----~~-~~~~~~~-------------~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      ||||||....     .+ ....+..             +.+++.+++.+.+ +||++||.......            ..
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~------------~~  150 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL------------PK  150 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC------------CC
Confidence            9999997321     01 1111111             6677777665544 99999998654321            12


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-----ecc-cCc-cccCCcCHHHHHHHHHHHhc
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----MET-EDT-LYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-----~~~-~~~-~~~~~i~~~Dva~~i~~~l~  264 (296)
                      ...|+.+|++.+.+.+       ..+++++.|+||.+.++.......     ... ... ....+..++|+|+++..++.
T Consensus       151 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~  230 (520)
T PRK06484        151 RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLAS  230 (520)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            4569999999998764       358999999999998765321100     000 000 01235688999999888776


Q ss_pred             CC
Q 022495          265 HP  266 (296)
Q Consensus       265 ~~  266 (296)
                      ..
T Consensus       231 ~~  232 (520)
T PRK06484        231 DQ  232 (520)
T ss_pred             cc
Confidence            43

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.4e-17  Score=142.04  Aligned_cols=205  Identities=13%  Similarity=0.079  Sum_probs=127.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhc-----CCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG-----DDSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~-----~~~d  137 (296)
                      +|+++|||| |+||+++++.|. +|++|++++|+.++..+..   .....++.++.+|++| .+.+.++++     +++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence            578999998 799999999996 8999999999876554322   1123468889999999 777776653     1499


Q ss_pred             EEEEcCCCCCCCCC-cchhHH---------HHHHHHHHHcCCCEEEEEccceeccCcc-C----cc---CChh---hh--
Q 022495          138 AVVCATGFQPGWDL-FAPWKA---------INLVEACRKRGVNRFILISSILVNGAAM-G----QI---LNPA---YI--  194 (296)
Q Consensus       138 ~vv~~ag~~~~~~~-~~~~~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~-~----~~---~~~~---~~--  194 (296)
                      +||||||....... .....+         +.+++.+++.  +++|++||........ .    ..   ....   ..  
T Consensus        79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (275)
T PRK06940         79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF  156 (275)
T ss_pred             EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence            99999997532211 111111         4455555443  4678888876432110 0    00   0000   00  


Q ss_pred             --h---hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc--------cCccccCCcCHHH
Q 022495          195 --F---LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET--------EDTLYEGTISRDQ  254 (296)
Q Consensus       195 --~---~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~--------~~~~~~~~i~~~D  254 (296)
                        +   ..++..|+.+|++.+.+.+       ..|++++.|.||++.++.....+....        .......+..++|
T Consensus       157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pee  236 (275)
T PRK06940        157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDE  236 (275)
T ss_pred             ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHH
Confidence              0   0235679999999887664       358999999999998875321110000        0001123678999


Q ss_pred             HHHHHHHHhcCCC--CCCCeEEE
Q 022495          255 VAEVAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       255 va~~i~~~l~~~~--~~~~~~~i  275 (296)
                      +|++++.++....  ..+..+.+
T Consensus       237 ia~~~~fL~s~~~~~itG~~i~v  259 (275)
T PRK06940        237 IAALAEFLMGPRGSFITGSDFLV  259 (275)
T ss_pred             HHHHHHHHcCcccCcccCceEEE
Confidence            9999888775432  24444444

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.77  E-value=3.6e-17  Score=140.33  Aligned_cols=196  Identities=18%  Similarity=0.136  Sum_probs=122.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhc---cc-CCCCCeEEEEcccCCChHHH----HHHh-----
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LS-KDNPSLQIVKADVTEGSAKL----SEAI-----  132 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~---~~-~~~~~~~~~~~D~~d~~~~~----~~~~-----  132 (296)
                      ++++||||+|+||++++++|+++|++|+++.|+ ++.....   +. ....++.++.+|++| .+.+    .+.+     
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSN-SATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCC-chhhHHHHHHHHHHHHH
Confidence            579999999999999999999999999988764 3333322   11 112356788999999 6533    2222     


Q ss_pred             --cCCCCEEEEcCCCCCCC-----CCcc----------h----hHH---------HHHHHHHHHcC------CCEEEEEc
Q 022495          133 --GDDSEAVVCATGFQPGW-----DLFA----------P----WKA---------INLVEACRKRG------VNRFILIS  176 (296)
Q Consensus       133 --~~~~d~vv~~ag~~~~~-----~~~~----------~----~~~---------~~~l~~~~~~~------~~~iV~~S  176 (296)
                        .+ +|+||||||.....     +...          .    ...         +.+++.++..+      .+++|++|
T Consensus        81 ~~g~-iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        81 AFGR-CDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             ccCC-ceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence              34 99999999963211     1100          0    011         44455553321      24788888


Q ss_pred             cceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---ecccCccc
Q 022495          177 SILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---METEDTLY  246 (296)
Q Consensus       177 S~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~~~~~~~~  246 (296)
                      |.....            +...+..|+.+|++++.+.+       ..|++++.|+||.+.++.......   ........
T Consensus       160 s~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~  227 (267)
T TIGR02685       160 DAMTDQ------------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLG  227 (267)
T ss_pred             hhhccC------------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCC
Confidence            864321            12235679999999998765       258999999999987553211100   00000111


Q ss_pred             cCCcCHHHHHHHHHHHhcCCC--CCCCeEEEE
Q 022495          247 EGTISRDQVAEVAVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       247 ~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~  276 (296)
                      ..+..++|++++++.++..+.  ..++.+.+.
T Consensus       228 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~  259 (267)
T TIGR02685       228 QREASAEQIADVVIFLVSPKAKYITGTCIKVD  259 (267)
T ss_pred             cCCCCHHHHHHHHHHHhCcccCCcccceEEEC
Confidence            135789999999999887542  244444443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.76  E-value=5.4e-18  Score=135.49  Aligned_cols=202  Identities=19%  Similarity=0.212  Sum_probs=142.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---c-CCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---S-KDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~-~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ++++||++++|||.|+||+.++++|+++|..+.+++.+.++.+...   . .....+.|+++|+++ ..+++++|+.   
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~-~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTN-RGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEecccc-HHHHHHHHHHHHH
Confidence            3567999999999999999999999999998888877766544321   1 145679999999999 7777777764   


Q ss_pred             ---CCCEEEEcCCCCCCCCCcchhHH---------HHHHHHHHHcC---CCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          135 ---DSEAVVCATGFQPGWDLFAPWKA---------INLVEACRKRG---VNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~~~~~~---------~~~l~~~~~~~---~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                         .+|++||+||+..+.+.+....+         ...++.|.+..   -+-||++||.....            |..-.
T Consensus        80 ~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~------------P~p~~  147 (261)
T KOG4169|consen   80 TFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD------------PMPVF  147 (261)
T ss_pred             HhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC------------ccccc
Confidence               59999999998765443322222         77888887663   45899999986432            12225


Q ss_pred             HHHHHHHHHHH---------HHHHHhCCcEEEEecCcccCCCCCC----ceeecccCc-----cccCCcCHHHHHHHHHH
Q 022495          200 GLTLIAKLQAE---------QYIRKSGINYTIIRPGGLRNEPPTG----NIIMETEDT-----LYEGTISRDQVAEVAVE  261 (296)
Q Consensus       200 ~~y~~sK~~~e---------~~~~~~~~~~~~lrp~~i~g~~~~~----~~~~~~~~~-----~~~~~i~~~Dva~~i~~  261 (296)
                      ..|+++|+..-         .+.++.|++++.++||.+.+.....    ...+...+.     .+.+-.+..+++..++.
T Consensus       148 pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~  227 (261)
T KOG4169|consen  148 PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVN  227 (261)
T ss_pred             hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHH
Confidence            67889998654         3445689999999999887642110    111111111     11346778999999999


Q ss_pred             HhcCCCCCCCeEEEEe
Q 022495          262 ALLHPESSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~~~~~~~~i~~  277 (296)
                      +++.+. .+.+|-+..
T Consensus       228 aiE~~~-NGaiw~v~~  242 (261)
T KOG4169|consen  228 AIEYPK-NGAIWKVDS  242 (261)
T ss_pred             HHhhcc-CCcEEEEec
Confidence            999854 566776655

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5e-17  Score=135.89  Aligned_cols=178  Identities=18%  Similarity=0.225  Sum_probs=120.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----CCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----DSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----~~d~vv~  141 (296)
                      +|+++||||+|+||+++++.|+++|++|++++|++++..+..  ...++.++.+|++| .+++.++++.    ++|+|||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~   77 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ--ALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFV   77 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH--hccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEE
Confidence            368999999999999999999999999999999987654432  22467888999999 7777766552    4999999


Q ss_pred             cCCCCCCC----CCcch--hHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          142 ATGFQPGW----DLFAP--WKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       142 ~ag~~~~~----~~~~~--~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |||.....    .....  ...             +.+++.+++ +.++++++||........         +...+..|
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~---------~~~~~~~Y  147 (225)
T PRK08177         78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELP---------DGGEMPLY  147 (225)
T ss_pred             cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccC---------CCCCccch
Confidence            99874221    00111  100             333443333 335899998864321110         11224469


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +.+|++.+.+++       ..+++++.|+||++.++.....           ..++....++.++..+....
T Consensus       148 ~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  208 (225)
T PRK08177        148 KASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN-----------APLDVETSVKGLVEQIEAAS  208 (225)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC-----------CCCCHHHHHHHHHHHHHhCC
Confidence            999999998775       2579999999999988652211           13556666666677766543

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=2.3e-17  Score=131.57  Aligned_cols=210  Identities=16%  Similarity=0.145  Sum_probs=147.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~  142 (296)
                      +++|||||++|-+|++|++.+.++|.  +-.++.                 ..-.+|+++ ....+..|.. ++..|||.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~-----------------~skd~DLt~-~a~t~~lF~~ekPthVIhl   62 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI-----------------GSKDADLTN-LADTRALFESEKPTHVIHL   62 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe-----------------ccccccccc-hHHHHHHHhccCCceeeeh
Confidence            37899999999999999999999875  111111                 111379999 8888888877 79999999


Q ss_pred             CCCCCCCCCcc-----hhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh----hhhhhHHHHHHHHH
Q 022495          143 TGFQPGWDLFA-----PWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI----FLNVFGLTLIAKLQ  208 (296)
Q Consensus       143 ag~~~~~~~~~-----~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~----~~~~~~~y~~sK~~  208 (296)
                      |+...+.....     .+..     .|++..|-+.|++++|+..|..+|.+....+.++...    +.+..-.|..+|.+
T Consensus        63 AAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~  142 (315)
T KOG1431|consen   63 AAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRM  142 (315)
T ss_pred             HhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHH
Confidence            87544321111     1111     8999999999999999999999998887777666422    22223357788876


Q ss_pred             HH----HHHHHhCCcEEEEecCcccCCCCCC------------------------ceeecccCccccCCcCHHHHHHHHH
Q 022495          209 AE----QYIRKSGINYTIIRPGGLRNEPPTG------------------------NIIMETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       209 ~e----~~~~~~~~~~~~lrp~~i~g~~~~~------------------------~~~~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                      +.    .+..++|..++.+-|.++||+...=                        .+...+.......+++.+|+|++++
T Consensus       143 idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i  222 (315)
T KOG1431|consen  143 IDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFI  222 (315)
T ss_pred             HHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHH
Confidence            65    3445789999999999999974221                        1112222333346899999999999


Q ss_pred             HHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          261 EALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       261 ~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +++.+-..- ...+++. +....++++|+++.+.+
T Consensus       223 ~vlr~Y~~v-Epiils~-ge~~EVtI~e~aeaV~e  255 (315)
T KOG1431|consen  223 WVLREYEGV-EPIILSV-GESDEVTIREAAEAVVE  255 (315)
T ss_pred             HHHHhhcCc-cceEecc-CccceeEHHHHHHHHHH
Confidence            999875432 3344444 23458999999998764

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.76  E-value=4.8e-17  Score=136.83  Aligned_cols=181  Identities=15%  Similarity=0.192  Sum_probs=123.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH---hcCCCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA---IGDDSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~~~d~vv~  141 (296)
                      |+++||||+|+||++++++|+++|  +.|++..|+....   .  ...++.++++|++| .+.+.++   +++ +|+|||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~--~~~~~~~~~~Dls~-~~~~~~~~~~~~~-id~li~   73 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---F--QHDNVQWHALDVTD-EAEIKQLSEQFTQ-LDWLIN   73 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---c--ccCceEEEEecCCC-HHHHHHHHHhcCC-CCEEEE
Confidence            589999999999999999999985  5666666654321   1  23578899999999 7776654   445 999999


Q ss_pred             cCCCCCCCC--------Ccc--hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          142 ATGFQPGWD--------LFA--PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       142 ~ag~~~~~~--------~~~--~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |||......        ...  .+..             +.+++.+++.+.++++++||...  .....       +..+
T Consensus        74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~~~~~-------~~~~  144 (235)
T PRK09009         74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--SISDN-------RLGG  144 (235)
T ss_pred             CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--ccccC-------CCCC
Confidence            999753210        001  0100             56667776666678999987531  11000       1123


Q ss_pred             hHHHHHHHHHHHHHHHH---------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          199 FGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~---------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +..|+.+|++++.+.+.         .+++++.|.||.+.++......   . ......+++++|+|+.++.++....
T Consensus       145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~---~-~~~~~~~~~~~~~a~~~~~l~~~~~  218 (235)
T PRK09009        145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ---Q-NVPKGKLFTPEYVAQCLLGIIANAT  218 (235)
T ss_pred             cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh---h-ccccCCCCCHHHHHHHHHHHHHcCC
Confidence            56799999999987641         3789999999999887533211   1 1112336889999999999998753

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.76  E-value=4.6e-17  Score=141.23  Aligned_cols=199  Identities=15%  Similarity=0.113  Sum_probs=125.1

Q ss_pred             ccCCCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc------------CC----CCCeEEEEccc--
Q 022495           62 VSVKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS------------KD----NPSLQIVKADV--  121 (296)
Q Consensus        62 ~~~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------------~~----~~~~~~~~~D~--  121 (296)
                      +++++|+++||||  +++||+++|+.|+++|++|++ .|..+++++...            ..    ......+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            5678999999999  899999999999999999998 665443322110            00    01246788898  


Q ss_pred             CCChH------------------HHHHHhcC------CCCEEEEcCCCCCC--CCC----cchhHH-------------H
Q 022495          122 TEGSA------------------KLSEAIGD------DSEAVVCATGFQPG--WDL----FAPWKA-------------I  158 (296)
Q Consensus       122 ~d~~~------------------~~~~~~~~------~~d~vv~~ag~~~~--~~~----~~~~~~-------------~  158 (296)
                      ++ .+                  ++.+++..      ++|++|||||....  ...    .+.+..             +
T Consensus        84 ~~-~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         84 DT-PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             Cc-cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            43 22                  34443322      49999999974321  110    111111             7


Q ss_pred             HHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------H-hCCcEEEEecCcccC
Q 022495          159 NLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRN  230 (296)
Q Consensus       159 ~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~~~~~~~lrp~~i~g  230 (296)
                      .+++.|++.  ++||++||.......      +     .....|+.+|++++.+.+       . .+++++.|.||.+.+
T Consensus       163 ~~~p~m~~~--G~II~isS~a~~~~~------p-----~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T  229 (303)
T PLN02730        163 HFGPIMNPG--GASISLTYIASERII------P-----GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGS  229 (303)
T ss_pred             HHHHHHhcC--CEEEEEechhhcCCC------C-----CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccC
Confidence            777777664  699999998643211      0     012369999999998764       2 479999999999988


Q ss_pred             CCCCCceeec-----ccCc-cccCCcCHHHHHHHHHHHhcCCC--CCCCeEEE
Q 022495          231 EPPTGNIIME-----TEDT-LYEGTISRDQVAEVAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       231 ~~~~~~~~~~-----~~~~-~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i  275 (296)
                      +.........     .... ....+..++|++.+++.++....  ..+..+.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~v  282 (303)
T PLN02730        230 RAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYV  282 (303)
T ss_pred             chhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEE
Confidence            7543210000     0011 11235689999999988886432  24444444

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.76  E-value=1.2e-17  Score=142.44  Aligned_cols=185  Identities=14%  Similarity=0.127  Sum_probs=125.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHH----CCCeEEEEEcCcchhhhccc---C--CCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           68 KIFVAGATGSSGKRIVEQLLA----KGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      .++||||+++||.+++++|++    +|++|++++|+.+...+...   .  ...++.++.+|++| .+++.++++.    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGA-EAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCC-HHHHHHHHHHHHhc
Confidence            589999999999999999997    79999999999776554321   1  13468889999999 7777765543    


Q ss_pred             --C----CCEEEEcCCCCCCC----C---CcchhHH-------------HHHHHHHHHc-C-CCEEEEEccceeccCccC
Q 022495          135 --D----SEAVVCATGFQPGW----D---LFAPWKA-------------INLVEACRKR-G-VNRFILISSILVNGAAMG  186 (296)
Q Consensus       135 --~----~d~vv~~ag~~~~~----~---~~~~~~~-------------~~~l~~~~~~-~-~~~iV~~SS~~~~~~~~~  186 (296)
                        .    .|+||||||.....    .   ..+.+..             +.+++.+++. + .++||++||...+..   
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~---  157 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP---  157 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC---
Confidence              1    26899999964321    1   0111111             6667777654 2 358999999865422   


Q ss_pred             ccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--eccc-------CccccCCc
Q 022495          187 QILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--METE-------DTLYEGTI  250 (296)
Q Consensus       187 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--~~~~-------~~~~~~~i  250 (296)
                               ......|+.+|++.+.+.+       ..+++++.+.||++.++.......  ..+.       ......+.
T Consensus       158 ---------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (256)
T TIGR01500       158 ---------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLV  228 (256)
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCC
Confidence                     1225679999999998765       258999999999998864221100  0000       00112368


Q ss_pred             CHHHHHHHHHHHhcC
Q 022495          251 SRDQVAEVAVEALLH  265 (296)
Q Consensus       251 ~~~Dva~~i~~~l~~  265 (296)
                      .++|+|+.++.++..
T Consensus       229 ~p~eva~~~~~l~~~  243 (256)
T TIGR01500       229 DPKVSAQKLLSLLEK  243 (256)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999999999853

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.76  E-value=3.4e-17  Score=138.01  Aligned_cols=185  Identities=19%  Similarity=0.198  Sum_probs=121.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-hhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      |+||||+|+||.++++.|+++|++|++++|... .....   +.....++.++.+|++| .+++.++++.      ++|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVAD-RVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999999887643 22221   11133568999999999 7777665542      4899


Q ss_pred             EEEcCCCCCCCC----CcchhHH---------HHHHHHH-----HHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          139 VVCATGFQPGWD----LFAPWKA---------INLVEAC-----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       139 vv~~ag~~~~~~----~~~~~~~---------~~~l~~~-----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      +|||+|......    ....+..         .++++++     ++.+.++||++||...+....            ...
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~  147 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR------------GQV  147 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC------------CCc
Confidence            999999643221    1111111         3333332     334557999999976432211            134


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-ec-ccCcc-ccCCcCHHHHHHHHHHHhcCC
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-ME-TEDTL-YEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-~~-~~~~~-~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      .|+.+|++.+.+.+       ..+++++.|+||.+.++....... .. ..... ...+..++|+|+.+..++..+
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  223 (239)
T TIGR01831       148 NYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDG  223 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCch
Confidence            58899998876553       358999999999998875332110 00 00001 123568899999999888754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.76  E-value=9.1e-17  Score=134.01  Aligned_cols=177  Identities=18%  Similarity=0.180  Sum_probs=123.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc---C-CCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG---D-DSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~-~~d~vv~  141 (296)
                      |++++||||+|+||++++++|+++|++|++++|+++...+...   .+++++.+|++| .+.+.+++.   + ++|++||
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA---LGAEALALDVAD-PASVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh---ccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEE
Confidence            3689999999999999999999999999999999776654432   356789999999 787777542   2 4999999


Q ss_pred             cCCCCCCC--C----CcchhHH---------HHHHHHHHH---cCCCEEEEEcccee-ccCccCccCChhhhhhhhhHHH
Q 022495          142 ATGFQPGW--D----LFAPWKA---------INLVEACRK---RGVNRFILISSILV-NGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       142 ~ag~~~~~--~----~~~~~~~---------~~~l~~~~~---~~~~~iV~~SS~~~-~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |+|.....  .    ....+..         .++++++..   ...+++|++||... ++...          ..+...|
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~~~~Y  146 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT----------GTTGWLY  146 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc----------CCCcccc
Confidence            99975211  1    1111111         444444432   12358999998753 33211          0112359


Q ss_pred             HHHHHHHHHHHHH-----hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          203 LIAKLQAEQYIRK-----SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       203 ~~sK~~~e~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +.+|.+.+.+++.     .+++++.|+||++.++....           .+++..++.++.++.++....
T Consensus       147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  205 (222)
T PRK06953        147 RASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA-----------QAALDPAQSVAGMRRVIAQAT  205 (222)
T ss_pred             HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC-----------CCCCCHHHHHHHHHHHHHhcC
Confidence            9999999988763     37899999999998864221           235788999999888876543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.75  E-value=8.3e-17  Score=125.59  Aligned_cols=200  Identities=18%  Similarity=0.179  Sum_probs=130.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .++.|.++||||+++||+++++.|...|++|.+.+++...+++....  ...+-..+.+|+.+ ++++...+++      
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~-a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSK-AHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCc-HHHHHHHHHHHHHhcC
Confidence            34578999999999999999999999999999999987765543321  11356778999999 7666654443      


Q ss_pred             CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcC--CCEEEEEccceeccCccCccCChhhhh
Q 022495          135 DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      +++++|+|||+..+.-    ..++|..             +...+++-..+  ..+||++||+-.--.+.+         
T Consensus        90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G---------  160 (256)
T KOG1200|consen   90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG---------  160 (256)
T ss_pred             CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc---------
Confidence            5999999999976532    1122222             66666643333  339999999864333333         


Q ss_pred             hhhhHHHHHHHH--------HHHHHHHHhCCcEEEEecCcccCCCCCCce---eecccCccc-cCCcCHHHHHHHHHHHh
Q 022495          196 LNVFGLTLIAKL--------QAEQYIRKSGINYTIIRPGGLRNEPPTGNI---IMETEDTLY-EGTISRDQVAEVAVEAL  263 (296)
Q Consensus       196 ~~~~~~y~~sK~--------~~e~~~~~~~~~~~~lrp~~i~g~~~~~~~---~~~~~~~~~-~~~i~~~Dva~~i~~~l  263 (296)
                         ...|.++|.        ++.+ +.+.+||++.+.||+|.+++.....   .-....... ..+-..+|+|..+..+.
T Consensus       161 ---QtnYAAsK~GvIgftktaArE-la~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLA  236 (256)
T KOG1200|consen  161 ---QTNYAASKGGVIGFTKTAARE-LARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLA  236 (256)
T ss_pred             ---chhhhhhcCceeeeeHHHHHH-HhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHHh
Confidence               233555554        4444 3367999999999999998643221   000001111 12456799999966665


Q ss_pred             cCCCCCC---CeEEEEe
Q 022495          264 LHPESSY---KVVEIIS  277 (296)
Q Consensus       264 ~~~~~~~---~~~~i~~  277 (296)
                       ++...+   .++++.+
T Consensus       237 -S~~ssYiTG~t~evtG  252 (256)
T KOG1200|consen  237 -SDASSYITGTTLEVTG  252 (256)
T ss_pred             -ccccccccceeEEEec
Confidence             555444   4455544

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.74  E-value=2e-17  Score=130.20  Aligned_cols=154  Identities=16%  Similarity=0.207  Sum_probs=117.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc----C--CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG----D--DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~--~~d  137 (296)
                      +.+-+||||||+.+||..+++.|.+.|-+|++..|+.+++.+... ..+.+..+.+|+.| .++.++.+.    .  .++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~-~~p~~~t~v~Dv~d-~~~~~~lvewLkk~~P~lN   80 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA-ENPEIHTEVCDVAD-RDSRRELVEWLKKEYPNLN   80 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHh-cCcchheeeecccc-hhhHHHHHHHHHhhCCchh
Confidence            357799999999999999999999999999999999998887665 55788999999999 665444332    1  499


Q ss_pred             EEEEcCCCCCCCCCc------ch--hHH-----------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          138 AVVCATGFQPGWDLF------AP--WKA-----------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~------~~--~~~-----------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      ++|||||+....+..      ..  ..+           ..+++...++.-.-||.+||.-++-            |...
T Consensus        81 vliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv------------Pm~~  148 (245)
T COG3967          81 VLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV------------PMAS  148 (245)
T ss_pred             eeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC------------cccc
Confidence            999999986543321      10  111           6677777777667899999975443            2333


Q ss_pred             hHHHHHHHHHHHHH-------HHHhCCcEEEEecCcccCC
Q 022495          199 FGLTLIAKLQAEQY-------IRKSGINYTIIRPGGLRNE  231 (296)
Q Consensus       199 ~~~y~~sK~~~e~~-------~~~~~~~~~~lrp~~i~g~  231 (296)
                      ...|+++|++...|       ++..+++++-+-|+.|.+.
T Consensus       149 ~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         149 TPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            56689999988754       3456899999999999875

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=9.2e-17  Score=147.87  Aligned_cols=200  Identities=17%  Similarity=0.108  Sum_probs=128.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc--hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .+++++++||||+|+||..+++.|+++|++|++++|...  ...+...  ..+..++.+|++| .+.+.+++..      
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVAN--RVGGTALALDITA-PDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH--HcCCeEEEEeCCC-HHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999999988532  2222211  1235688999999 7777665542      


Q ss_pred             CCCEEEEcCCCCCCCCC----cchhHH---------HHHHHHHHHc----CCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPWKA---------INLVEACRKR----GVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~~~---------~~~l~~~~~~----~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||.......    ...+..         .++.+++...    ..++||++||...+....            
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~------------  351 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR------------  351 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC------------
Confidence            39999999997543211    111111         4555555442    236999999986543221            


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-ecc---cCccccCCcCHHHHHHHHHHHhcCC
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-MET---EDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-~~~---~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ....|+.+|.+.+.+++       +.+++++.|.||.+.++....... ...   ..........++|+|+++..++...
T Consensus       352 ~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~  431 (450)
T PRK08261        352 GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPA  431 (450)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChh
Confidence            24569999998776653       368999999999987654221100 000   0011122346789999998877542


Q ss_pred             C--CCCCeEEEEe
Q 022495          267 E--SSYKVVEIIS  277 (296)
Q Consensus       267 ~--~~~~~~~i~~  277 (296)
                      .  ..++++.+.+
T Consensus       432 ~~~itG~~i~v~g  444 (450)
T PRK08261        432 SGGVTGNVVRVCG  444 (450)
T ss_pred             hcCCCCCEEEECC
Confidence            2  2455665544

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.74  E-value=1e-16  Score=132.19  Aligned_cols=219  Identities=19%  Similarity=0.150  Sum_probs=155.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc----cc---CCCCCeEEEEcccCCChHHHHHHhcC-CCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT----LS---KDNPSLQIVKADVTEGSAKLSEAIGD-DSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~---~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d  137 (296)
                      +|++||||-||+-|++|++.|++.|+.|+.+.|..+.....    ..   ..+.++.++.+|++| ...+.+++.. .+|
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD-~~~l~r~l~~v~Pd   80 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTD-SSNLLRILEEVQPD   80 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccc-hHHHHHHHHhcCch
Confidence            68999999999999999999999999999999874322111    11   134568999999999 8889988876 699


Q ss_pred             EEEEcCCCCCC---CCC-cchhH-----HHHHHHHHHHcCC--CEEEEEccceeccCccCccCChhhhhhhhhHHHHHHH
Q 022495          138 AVVCATGFQPG---WDL-FAPWK-----AINLVEACRKRGV--NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK  206 (296)
Q Consensus       138 ~vv~~ag~~~~---~~~-~~~~~-----~~~~l~~~~~~~~--~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK  206 (296)
                      -|+|.|+-..-   ++. ....+     ..+++|+++..+.  -||...||...||.....+.++ ..|..|.++|+.+|
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E-~TPFyPrSPYAvAK  159 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKE-TTPFYPRSPYAVAK  159 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCcccc-CCCCCCCCHHHHHH
Confidence            99999875432   211 11111     1999999998863  3888999999999775554444 45778899999999


Q ss_pred             HHHHHHHH----HhCCcEEEEecCcccCCCC--CCc--------------------eeecccCccccCCcCHHHHHHHHH
Q 022495          207 LQAEQYIR----KSGINYTIIRPGGLRNEPP--TGN--------------------IIMETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       207 ~~~e~~~~----~~~~~~~~lrp~~i~g~~~--~~~--------------------~~~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                      ..+-....    .+|+-..   .|..|....  ++.                    -+..+..+....|-+..|.++++.
T Consensus       160 lYa~W~tvNYResYgl~Ac---nGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mw  236 (345)
T COG1089         160 LYAYWITVNYRESYGLFAC---NGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMW  236 (345)
T ss_pred             HHHHheeeehHhhcCceee---cceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHH
Confidence            99875443    3454321   122222110  111                    111223334456889999999999


Q ss_pred             HHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhh
Q 022495          261 EALLHPESSYKVVEIISRVDAPKRSYEDLFGSIK  294 (296)
Q Consensus       261 ~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~  294 (296)
                      .+|..+.  ...|.+..   +...+++|+++...
T Consensus       237 lmLQq~~--PddyViAT---g~t~sVrefv~~Af  265 (345)
T COG1089         237 LMLQQEE--PDDYVIAT---GETHSVREFVELAF  265 (345)
T ss_pred             HHHccCC--CCceEEec---CceeeHHHHHHHHH
Confidence            9988764  56799988   79999999998754

>PLN00015 protochlorophyllide reductase

Probab=99.73  E-value=1.4e-16  Score=139.52  Aligned_cols=197  Identities=16%  Similarity=0.218  Sum_probs=126.7

Q ss_pred             EEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC------CCCEE
Q 022495           70 FVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------DSEAV  139 (296)
Q Consensus        70 lVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~v  139 (296)
                      +||||+++||.+++++|+++| ++|++.+|+.++..+...   ....++.++.+|++| .+++.++++.      ++|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLAS-LDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCC-HHHHHHHHHHHHhcCCCCCEE
Confidence            699999999999999999999 999999998766543221   123468889999999 7777665532      49999


Q ss_pred             EEcCCCCCCC-C--C--cchhHH-------------HHHHHHHHHcC--CCEEEEEccceeccCcc----Cc---cCChh
Q 022495          140 VCATGFQPGW-D--L--FAPWKA-------------INLVEACRKRG--VNRFILISSILVNGAAM----GQ---ILNPA  192 (296)
Q Consensus       140 v~~ag~~~~~-~--~--~~~~~~-------------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~----~~---~~~~~  192 (296)
                      |||||+.... .  .  .+.+..             +.+++.+++.+  .++||++||...+-...    ..   ..+..
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            9999974221 1  0  111111             67788887765  57999999986542100    00   00000


Q ss_pred             ----------------hhhhhhhHHHHHHHHHHHHHH----HH----hCCcEEEEecCccc-CCCCCCcee-----eccc
Q 022495          193 ----------------YIFLNVFGLTLIAKLQAEQYI----RK----SGINYTIIRPGGLR-NEPPTGNII-----METE  242 (296)
Q Consensus       193 ----------------~~~~~~~~~y~~sK~~~e~~~----~~----~~~~~~~lrp~~i~-g~~~~~~~~-----~~~~  242 (296)
                                      .....+...|+.||++.+.+.    ++    .|++++.|.||++. ++.......     ....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~  239 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPF  239 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHH
Confidence                            011245678999999865443    22    47999999999995 444222100     0000


Q ss_pred             -CccccCCcCHHHHHHHHHHHhcCCC
Q 022495          243 -DTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       243 -~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                       ......+.++++.|+.++.++.+..
T Consensus       240 ~~~~~~~~~~pe~~a~~~~~l~~~~~  265 (308)
T PLN00015        240 QKYITKGYVSEEEAGKRLAQVVSDPS  265 (308)
T ss_pred             HHHHhcccccHHHhhhhhhhhccccc
Confidence             0011235788999999998876543

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.72  E-value=3.4e-16  Score=125.28  Aligned_cols=189  Identities=18%  Similarity=0.267  Sum_probs=129.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC-CCeEEE-EEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKA-GVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~-~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .+.|+||||+.+||..|+++|++. |.++++ ..|+++++.+.+.   ..++++++++.|+++ .+++.++..+      
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~-deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTC-DESIDNFVQEVEKIVG   81 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEeccc-HHHHHHHHHHHHhhcc
Confidence            467999999999999999999975 666554 4566777433222   247899999999998 6766655432      


Q ss_pred             --CCCEEEEcCCCCCCCCCcch---------hHH---------HHHHHHHHHcCCC-----------EEEEEccceeccC
Q 022495          135 --DSEAVVCATGFQPGWDLFAP---------WKA---------INLVEACRKRGVN-----------RFILISSILVNGA  183 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~~~---------~~~---------~~~l~~~~~~~~~-----------~iV~~SS~~~~~~  183 (296)
                        .+|.+++|||+.........         ++.         +.+++..++...+           .||++||...-  
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s--  159 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS--  159 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc--
Confidence              48999999998654322111         111         7777766665433           79999998532  


Q ss_pred             ccCccCChhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHH
Q 022495          184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVA  256 (296)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva  256 (296)
                      ..+       ....++..|..||++...+.|.       .++-++.+.||||.+++..           ....+++++-+
T Consensus       160 ~~~-------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-----------~~a~ltveeSt  221 (249)
T KOG1611|consen  160 IGG-------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-----------KKAALTVEEST  221 (249)
T ss_pred             cCC-------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-----------CCcccchhhhH
Confidence            111       1233477899999999988764       4677899999999997643           22467777777


Q ss_pred             HHHHHHhcC--CCCCCCeEEE
Q 022495          257 EVAVEALLH--PESSYKVVEI  275 (296)
Q Consensus       257 ~~i~~~l~~--~~~~~~~~~i  275 (296)
                      ..++..+..  +...|..|+.
T Consensus       222 s~l~~~i~kL~~~hnG~ffn~  242 (249)
T KOG1611|consen  222 SKLLASINKLKNEHNGGFFNR  242 (249)
T ss_pred             HHHHHHHHhcCcccCcceEcc
Confidence            777777654  3345544443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.72  E-value=2.1e-16  Score=136.91  Aligned_cols=204  Identities=18%  Similarity=0.219  Sum_probs=136.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc-----CCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      .++.+++++|||||++||.++|++|+.+|++|++..|+.++..+...     ....++.++++|++| .+++.++...  
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLss-l~SV~~fa~~~~  109 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSS-LKSVRKFAEEFK  109 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC-HHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999865443221     245678899999999 7777654432  


Q ss_pred             ----CCCEEEEcCCCCCCCCCc--------chhHH-------HHHHHHHHHcCCCEEEEEccceeccC--ccCccCChhh
Q 022495          135 ----DSEAVVCATGFQPGWDLF--------APWKA-------INLVEACRKRGVNRFILISSILVNGA--AMGQILNPAY  193 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~~--------~~~~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~--~~~~~~~~~~  193 (296)
                          +.|++|+|||+.......        ...+.       ..+++.++.....|||++||... +.  .... .+.+.
T Consensus       110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~-l~~~~  187 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKD-LSGEK  187 (314)
T ss_pred             hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhh-ccchh
Confidence                699999999975322110        01111       88888888876679999999864 11  1111 11111


Q ss_pred             hh-hhhhHHHHHHHHHHHHHHH----H--hCCcEEEEecCcccCCCCCC-ceeeccc-CccccC-CcCHHHHHHHHHHHh
Q 022495          194 IF-LNVFGLTLIAKLQAEQYIR----K--SGINYTIIRPGGLRNEPPTG-NIIMETE-DTLYEG-TISRDQVAEVAVEAL  263 (296)
Q Consensus       194 ~~-~~~~~~y~~sK~~~e~~~~----~--~~~~~~~lrp~~i~g~~~~~-~~~~~~~-~~~~~~-~i~~~Dva~~i~~~l  263 (296)
                      .. +.....|+.||.+...+.+    +  .|+.++.+.||.+.++.... ....... ...... +-+.++-|..++.++
T Consensus       188 ~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a  267 (314)
T KOG1208|consen  188 AKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAATTCYAA  267 (314)
T ss_pred             ccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhheehhc
Confidence            11 3444579999999875543    2  27999999999998873332 1000000 000011 236777788888888


Q ss_pred             cCCCC
Q 022495          264 LHPES  268 (296)
Q Consensus       264 ~~~~~  268 (296)
                      .+|+.
T Consensus       268 ~~p~~  272 (314)
T KOG1208|consen  268 LSPEL  272 (314)
T ss_pred             cCccc
Confidence            88753

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.70  E-value=1e-16  Score=128.68  Aligned_cols=220  Identities=12%  Similarity=0.131  Sum_probs=160.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~a  143 (296)
                      -.+|||||+-|.+|..+++.|..+ |.+-++++.-.+.....+    ..-.++..|+.| ...+++++-. ++|++||..
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~----~~GPyIy~DILD-~K~L~eIVVn~RIdWL~HfS  118 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT----DVGPYIYLDILD-QKSLEEIVVNKRIDWLVHFS  118 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc----ccCCchhhhhhc-cccHHHhhcccccceeeeHH
Confidence            569999999999999999988876 755444433222222222    456788899999 8889988755 799999975


Q ss_pred             CCCC---CCC--CcchhH---HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-
Q 022495          144 GFQP---GWD--LFAPWK---AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-  214 (296)
Q Consensus       144 g~~~---~~~--~~~~~~---~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-  214 (296)
                      +...   +.+  .....+   +.|+++.+++++. ++...|+++++|...+....++..-+.|...||.+|..+|-+-+ 
T Consensus       119 ALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy  197 (366)
T KOG2774|consen  119 ALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEY  197 (366)
T ss_pred             HHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHH
Confidence            4321   111  111111   2999999999987 67778999999988877777777778899999999999986543 


Q ss_pred             ---HhCCcEEEEecCcccCCCCCC------------------ceeecccCccccCCcCHHHHHHHHHHHhcCCC--CCCC
Q 022495          215 ---KSGINYTIIRPGGLRNEPPTG------------------NIIMETEDTLYEGTISRDQVAEVAVEALLHPE--SSYK  271 (296)
Q Consensus       215 ---~~~~~~~~lrp~~i~g~~~~~------------------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~  271 (296)
                         ++|+++-++|...+......+                  ........+.+.++++.+|+-+++++++..+.  ...+
T Consensus       198 ~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr  277 (366)
T KOG2774|consen  198 FNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRR  277 (366)
T ss_pred             HHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhh
Confidence               579999999988776542111                  11122334455678999999999998887654  3567


Q ss_pred             eEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          272 VVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       272 ~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +||+.+    ..++-+|++.++.+
T Consensus       278 ~ynvt~----~sftpee~~~~~~~  297 (366)
T KOG2774|consen  278 TYNVTG----FSFTPEEIADAIRR  297 (366)
T ss_pred             eeeece----eccCHHHHHHHHHh
Confidence            899987    88999999999876

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.69  E-value=1.7e-15  Score=135.41  Aligned_cols=230  Identities=19%  Similarity=0.205  Sum_probs=150.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCC---CeEEEEEcCcchhh------hcc------------cCCCCCeEEEEcccC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKAK------TTL------------SKDNPSLQIVKADVT  122 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~------~~~------------~~~~~~~~~~~~D~~  122 (296)
                      +.+|+|+|||||||+|.-+++.|+..-   .+++++.|......      .++            .....++..+.||+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            468999999999999999999999752   37889888754321      110            112367889999999


Q ss_pred             CC-----hHHHHHHhcCCCCEEEEcCCCCCCCCCcchh---HH---HHHHHHHHHcC-CCEEEEEccceeccCccC---c
Q 022495          123 EG-----SAKLSEAIGDDSEAVVCATGFQPGWDLFAPW---KA---INLVEACRKRG-VNRFILISSILVNGAAMG---Q  187 (296)
Q Consensus       123 d~-----~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~---~~---~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~---~  187 (296)
                      ++     ...+.....+ +|+|||+|+.....+.....   +.   +++++.|++.. .+-+|++|+..+......   .
T Consensus        90 ~~~LGis~~D~~~l~~e-V~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~  168 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADE-VNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEK  168 (467)
T ss_pred             CcccCCChHHHHHHHhc-CCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccc
Confidence            84     2344556677 99999999865544332211   11   88888888774 678999999987521110   0


Q ss_pred             ----cC--Chh------------hh-----h--hhhhHHHHHHHHHHHHHHHH--hCCcEEEEecCcccCCCCC---Cc-
Q 022495          188 ----IL--NPA------------YI-----F--LNVFGLTLIAKLQAEQYIRK--SGINYTIIRPGGLRNEPPT---GN-  236 (296)
Q Consensus       188 ----~~--~~~------------~~-----~--~~~~~~y~~sK~~~e~~~~~--~~~~~~~lrp~~i~g~~~~---~~-  236 (296)
                          ..  +++            ..     .  ....+.|.-+|+.+|.++.+  .+++++|+||+.|......   |. 
T Consensus       169 ~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWi  248 (467)
T KOG1221|consen  169 PYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWI  248 (467)
T ss_pred             ccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCcc
Confidence                00  010            00     0  11245699999999999865  5899999999977653211   10 


Q ss_pred             --------eee----------cccCccccCCcCHHHHHHHHHHHhcC-----CCCCCCeEEEEeCCCCCCCCHHHHHHHh
Q 022495          237 --------IIM----------ETEDTLYEGTISRDQVAEVAVEALLH-----PESSYKVVEIISRVDAPKRSYEDLFGSI  293 (296)
Q Consensus       237 --------~~~----------~~~~~~~~~~i~~~Dva~~i~~~l~~-----~~~~~~~~~i~~~~~~~~~~~~el~~~i  293 (296)
                              ++.          ....+.....|.+|.++.+++.+...     +.....+||+++ +.-++++|.++.+..
T Consensus       249 dn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~ts-s~~Np~t~~~~~e~~  327 (467)
T KOG1221|consen  249 DNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTS-SNDNPVTWGDFIELA  327 (467)
T ss_pred             ccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecc-cccCcccHHHHHHHH
Confidence                    111          11222334578899998887765531     112245899988 556899999999876


Q ss_pred             hc
Q 022495          294 KQ  295 (296)
Q Consensus       294 ~~  295 (296)
                      .+
T Consensus       328 ~~  329 (467)
T KOG1221|consen  328 LR  329 (467)
T ss_pred             HH
Confidence            43

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.67  E-value=1.9e-16  Score=121.37  Aligned_cols=192  Identities=15%  Similarity=0.094  Sum_probs=135.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv  140 (296)
                      ++.|+.|+|||+.-+||+.+++.|.+.|++|++..|++..+..+.+....-+..+.+|+.+ -+.+.+.+..  .+|.++
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~-wea~~~~l~~v~pidgLV   82 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSA-WEALFKLLVPVFPIDGLV   82 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccH-HHHHHHhhcccCchhhhh
Confidence            4568999999999999999999999999999999999998887776444558999999999 7878777765  799999


Q ss_pred             EcCCCCCCCCC----------cchhHH-------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          141 CATGFQPGWDL----------FAPWKA-------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       141 ~~ag~~~~~~~----------~~~~~~-------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      ||||+.-....          ....++       +-+.+-....+ .+.||++||....            .+....+.|
T Consensus        83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~------------R~~~nHtvY  150 (245)
T KOG1207|consen   83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI------------RPLDNHTVY  150 (245)
T ss_pred             ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc------------cccCCceEE
Confidence            99996421111          111111       33333333333 3579999998532            123346779


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccc------cCCcCHHHHHHHHHHHhcCCC
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLY------EGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~------~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +++|++.+.+.+       ...||++.+.|.-+++.+....+--+...+..      ..|--++.+..++..+|.+..
T Consensus       151 catKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  151 CATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             eecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCc
Confidence            999999987654       24799999999999887654443222111111      225557888888887776543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.67  E-value=3.3e-16  Score=132.28  Aligned_cols=176  Identities=18%  Similarity=0.247  Sum_probs=119.6

Q ss_pred             cCC--chHHHHHHHHHHHCCCeEEEEEcCcchh----hhcccCCCCCeEEEEcccCCChHHHHHH-------h-cCCCCE
Q 022495           73 GAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKA----KTTLSKDNPSLQIVKADVTEGSAKLSEA-------I-GDDSEA  138 (296)
Q Consensus        73 Ga~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------~-~~~~d~  138 (296)
                      |++  ++||+++++.|+++|++|++.+|+.++.    .++...  .+..++.+|++| .+++.++       + +. +|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~--~~~~~~~~D~~~-~~~v~~~~~~~~~~~~g~-iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKE--YGAEVIQCDLSD-EESVEALFDEAVERFGGR-IDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHH--TTSEEEESCTTS-HHHHHHHHHHHHHHHCSS-ESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH--cCCceEeecCcc-hHHHHHHHHHHHhhcCCC-eEE
Confidence            666  9999999999999999999999998873    222221  224479999999 7766655       4 44 999


Q ss_pred             EEEcCCCCCC---CCCcch-----hHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          139 VVCATGFQPG---WDLFAP-----WKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       139 vv~~ag~~~~---~~~~~~-----~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      +|||+|....   ......     +..             +.+++.+++.  +++|++||......            ..
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~------------~~  142 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRP------------MP  142 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSB------------ST
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhccc------------Cc
Confidence            9999987553   111111     111             6666666665  58999999854322            22


Q ss_pred             hhHHHHHHHHHHHHHHH-------H-hCCcEEEEecCcccCCCCCCc-----eeecccCccc-cCCcCHHHHHHHHHHHh
Q 022495          198 VFGLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEPPTGN-----IIMETEDTLY-EGTISRDQVAEVAVEAL  263 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~-~~~~~~~lrp~~i~g~~~~~~-----~~~~~~~~~~-~~~i~~~Dva~~i~~~l  263 (296)
                      .+..|+.+|++.+.+.+       . +|||+++|.||.+.++.....     +......... ..+..++|+|++++.++
T Consensus       143 ~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~  222 (241)
T PF13561_consen  143 GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLA  222 (241)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHh
Confidence            35579999999998765       4 799999999999997641110     0000001111 23468999999988887


Q ss_pred             cCC
Q 022495          264 LHP  266 (296)
Q Consensus       264 ~~~  266 (296)
                      .+.
T Consensus       223 s~~  225 (241)
T PF13561_consen  223 SDA  225 (241)
T ss_dssp             SGG
T ss_pred             Ccc
Confidence            654

...

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.67  E-value=1.2e-15  Score=121.46  Aligned_cols=136  Identities=16%  Similarity=0.212  Sum_probs=96.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcC--cchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRD--LDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      |+++||||+++||++++++|+++| ..|+++.|+  .+...++   +.....++.++++|++| .++++++++.      
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence            589999999999999999999995 578888888  3333332   22245789999999999 7777665543      


Q ss_pred             CCCEEEEcCCCCCCCCCcch--hHH-----------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          135 DSEAVVCATGFQPGWDLFAP--WKA-----------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~~~--~~~-----------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ++|++|||+|..........  ...           ..+.+++...+.++||++||+....+.            .....
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~~~~~  147 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGS------------PGMSA  147 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSS------------TTBHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCC------------CCChh
Confidence            59999999998663222211  111           444455544556799999998654322            23567


Q ss_pred             HHHHHHHHHHHHHH
Q 022495          202 TLIAKLQAEQYIRK  215 (296)
Q Consensus       202 y~~sK~~~e~~~~~  215 (296)
                      |+.+|++.+.+.+.
T Consensus       148 Y~askaal~~~~~~  161 (167)
T PF00106_consen  148 YSASKAALRGLTQS  161 (167)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988753

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.66  E-value=2.3e-15  Score=126.63  Aligned_cols=156  Identities=24%  Similarity=0.402  Sum_probs=119.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCC-CCCeEEEEcccCCChHHHHHHhc-------C
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIG-------D  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~-------~  134 (296)
                      +..+|.|+|||+..+.|..+|++|.++|+.|.+...+++..+.+.... +++...++.|+++ +++++++.+       +
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~-~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK-PESVKEAAQWVKKHLGE  104 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCC-HHHHHHHHHHHHHhccc
Confidence            345789999999999999999999999999999988877777665544 7889999999999 788777653       1


Q ss_pred             -CCCEEEEcCCCCC-----CCCCcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQP-----GWDLFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~-----~~~~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ..-.||||||+..     +|-..+.+..             +.+++..++.. +|||++||+..-  .          +
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR--~----------~  171 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGR--V----------A  171 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccC--c----------c
Confidence             4779999999642     2222222221             77888887775 699999999631  1          1


Q ss_pred             hhhhHHHHHHHHHHHHHH-------HHhCCcEEEEecCcccCCC
Q 022495          196 LNVFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEP  232 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~-------~~~~~~~~~lrp~~i~g~~  232 (296)
                      ....+.|+.||.++|.+.       +.+|+++.+|-||.+.++.
T Consensus       172 ~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l  215 (322)
T KOG1610|consen  172 LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNL  215 (322)
T ss_pred             CcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcccccc
Confidence            223567999999999764       3579999999999776654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.66  E-value=3.6e-15  Score=119.24  Aligned_cols=151  Identities=21%  Similarity=0.182  Sum_probs=106.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhh------cccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT------TLSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++||||+|+||.+++++|+++|. .|+++.|++.....      .+.....++.++.+|+++ .+.+.+.+..     
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVAD-RAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4799999999999999999999996 68888887644321      111123567889999999 7777665543     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhH------H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWK------A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~------~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                       ++|.|||++|.......    ...+.      .   .++++++++.+.+++|++||....-..            ....
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~------------~~~~  147 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN------------PGQA  147 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC------------CCch
Confidence             38999999986432110    01111      1   777788877777899999997542111            1245


Q ss_pred             HHHHHHHHHHHHHH---HhCCcEEEEecCcccC
Q 022495          201 LTLIAKLQAEQYIR---KSGINYTIIRPGGLRN  230 (296)
Q Consensus       201 ~y~~sK~~~e~~~~---~~~~~~~~lrp~~i~g  230 (296)
                      .|+.+|.+.+.+++   ..+++++.+.||.+.+
T Consensus       148 ~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~~  180 (180)
T smart00822      148 NYAAANAFLDALAAHRRARGLPATSINWGAWAD  180 (180)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCceEEEeeccccC
Confidence            68999999998764   4689999999997643

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.64  E-value=5.2e-15  Score=117.24  Aligned_cols=152  Identities=16%  Similarity=0.213  Sum_probs=111.6

Q ss_pred             CCeEEEEcC-CchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-------CCC
Q 022495           66 QKKIFVAGA-TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-------DSE  137 (296)
Q Consensus        66 ~~~ilVtGa-~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-------~~d  137 (296)
                      .|+|||||+ .|+||.+|+++|.+.|+.|++..|..+....+.  ...++..++.|+++ ++.+.....+       ++|
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~--~~~gl~~~kLDV~~-~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA--IQFGLKPYKLDVSK-PEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH--HhhCCeeEEeccCC-hHHHHHHHHHHhhCCCCceE
Confidence            467888875 599999999999999999999999988776543  23568999999999 7776654432       699


Q ss_pred             EEEEcCCCCCCCCCcch-hH-H---------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          138 AVVCATGFQPGWDLFAP-WK-A---------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~-~~-~---------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      .++||||..-.....+. .. .               +.+.....+. .+.||+++|..+|-.            ....+
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~vp------------fpf~~  150 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGVVP------------FPFGS  150 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEEec------------cchhh
Confidence            99999996432221111 00 0               4444333333 369999999987642            23357


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCC
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP  233 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~  233 (296)
                      .|.++|++...+.+       .+|++++.+-+|+|.+.-.
T Consensus       151 iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia  190 (289)
T KOG1209|consen  151 IYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIA  190 (289)
T ss_pred             hhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccc
Confidence            79999999998764       4799999999999988643

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.64  E-value=5.7e-15  Score=128.12  Aligned_cols=198  Identities=16%  Similarity=0.142  Sum_probs=116.0

Q ss_pred             cCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCc---------chh--hhccc-CCCC-----CeEEEEcccCC
Q 022495           63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDL---------DKA--KTTLS-KDNP-----SLQIVKADVTE  123 (296)
Q Consensus        63 ~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~--~~~~~-~~~~-----~~~~~~~D~~d  123 (296)
                      ++++|+++||||+  .+||+++|+.|+++|++|++.++.+         +..  ..... ....     .+..+.+|+.+
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            5678999999995  9999999999999999999976542         000  00000 0000     01112233333


Q ss_pred             ChH------------------HHHHH-------hcCCCCEEEEcCCCCCC--CCC----cchhHH-------------HH
Q 022495          124 GSA------------------KLSEA-------IGDDSEAVVCATGFQPG--WDL----FAPWKA-------------IN  159 (296)
Q Consensus       124 ~~~------------------~~~~~-------~~~~~d~vv~~ag~~~~--~~~----~~~~~~-------------~~  159 (296)
                       .+                  ++.++       ++ ++|++|||||....  ...    .+.+..             +.
T Consensus        85 -~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G-~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a  162 (299)
T PRK06300         85 -PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFG-HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH  162 (299)
T ss_pred             -CEEeecccCccccccCCCHHHHHHHHHHHHHHcC-CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence             21                  23332       33 49999999985321  111    111111             66


Q ss_pred             HHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh-HHHHHHHHHHHHHHH-------H-hCCcEEEEecCcccC
Q 022495          160 LVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF-GLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRN  230 (296)
Q Consensus       160 ~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~-~~y~~sK~~~e~~~~-------~-~~~~~~~lrp~~i~g  230 (296)
                      +++.|++.  +++|++||+......            ..+ ..|+.+|++++.+.+       + +|++++.|.||.+.+
T Consensus       163 ~~p~m~~~--G~ii~iss~~~~~~~------------p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T  228 (299)
T PRK06300        163 FGPIMNPG--GSTISLTYLASMRAV------------PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLAS  228 (299)
T ss_pred             HHHHhhcC--CeEEEEeehhhcCcC------------CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccC
Confidence            77777654  489999987543211            112 369999999987664       2 389999999999988


Q ss_pred             CCCCCceeecc------cCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEE
Q 022495          231 EPPTGNIIMET------EDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       231 ~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~  276 (296)
                      +..........      ..........++|++.++++++....  ..+.++.+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vd  282 (299)
T PRK06300        229 RAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVD  282 (299)
T ss_pred             hhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence            65321000000      00011235679999999888876432  344555443

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.63  E-value=1.3e-14  Score=121.77  Aligned_cols=187  Identities=17%  Similarity=0.202  Sum_probs=131.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-----CCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      .+|+||||+.+||..++.++..+|++|+++.|+.++..+....     ....+.++.+|+.| .+++...+++      .
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~-Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVID-YDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEecccccc-HHHHHHHHhhhhhccCC
Confidence            6899999999999999999999999999999998887654432     22347799999999 8888777765      5


Q ss_pred             CCEEEEcCCCCCCC--CCcchhHH---------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhh
Q 022495          136 SEAVVCATGFQPGW--DLFAPWKA---------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       136 ~d~vv~~ag~~~~~--~~~~~~~~---------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      +|.+|||||..-..  ........               +..+.+|++.. .++|+++||..+-            .+..
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~------------~~i~  180 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM------------LGIY  180 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh------------cCcc
Confidence            89999999964221  11111111               67777777765 6699999997531            1233


Q ss_pred             hhHHHHHHHHHHHHHH-------HHhCCcEEEEecCcccCCCCCCceeecccC-c---cccCCcCHHHHHHHHHHHhcCC
Q 022495          198 VFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIMETED-T---LYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~-------~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~-~---~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      .++.|..+|.+...+.       ..+++.++...|+.+.++.....-...+.. .   ...+.+..+++|++++.-+...
T Consensus       181 GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  181 GYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             cccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhhc
Confidence            4677888888776543       246999999999999887543322111111 1   1134578899999988877653

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.61  E-value=2e-14  Score=122.05  Aligned_cols=154  Identities=18%  Similarity=0.220  Sum_probs=102.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch--hhhcccCCC----CCeEEEEcccCCChHHHHHHhcC---
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKTTLSKDN----PSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++|+++||||+++||.++|+.|+++|++|+++.|....  .........    ..+.+..+|+++..+.+..++..   
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999998888887553  121111111    36778889999613334333322   


Q ss_pred             ---CCCEEEEcCCCCCCC-C--Cc--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 ---DSEAVVCATGFQPGW-D--LF--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~-~--~~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                         ++|++|||||..... .  ..  +.+..             +.+.+.+++.   +||++||.... ...+.      
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~------  152 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPG------  152 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCC------
Confidence               399999999975421 1  11  11111             3333334422   99999999654 22110      


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCC
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEP  232 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~  232 (296)
                           +..|+.+|++.+.+.+       .+|++++.|.||.+.++.
T Consensus       153 -----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         153 -----QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence                 4679999999987653       368999999999777654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.57  E-value=3.8e-14  Score=119.75  Aligned_cols=175  Identities=14%  Similarity=0.031  Sum_probs=110.7

Q ss_pred             HHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC---CCCEEEEcCCCCCCCCCcchhH--
Q 022495           82 IVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCATGFQPGWDLFAPWK--  156 (296)
Q Consensus        82 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~d~vv~~ag~~~~~~~~~~~~--  156 (296)
                      ++++|+++|++|++++|+.++..        ...++++|++| .+++.++++.   ++|+||||||............  
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~--------~~~~~~~Dl~~-~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN   71 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT--------LDGFIQADLGD-PASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVN   71 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh--------hhHhhcccCCC-HHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhc
Confidence            47899999999999999876531        24578999999 8888877753   4999999999753222111111  


Q ss_pred             H---HHHHHHHHHc--CCCEEEEEccceeccCccCccCCh---------h------hhhhhhhHHHHHHHHHHHHHHH--
Q 022495          157 A---INLVEACRKR--GVNRFILISSILVNGAAMGQILNP---------A------YIFLNVFGLTLIAKLQAEQYIR--  214 (296)
Q Consensus       157 ~---~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~---------~------~~~~~~~~~y~~sK~~~e~~~~--  214 (296)
                      .   ..+++.+...  +.++||++||...|+.....+..+         .      ..+......|+.+|.+.+.+.+  
T Consensus        72 ~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  151 (241)
T PRK12428         72 FLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQ  151 (241)
T ss_pred             hHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHH
Confidence            1   3344443321  126999999998875321100000         0      0123346789999999986542  


Q ss_pred             ------HhCCcEEEEecCcccCCCCCCcee------ecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          215 ------KSGINYTIIRPGGLRNEPPTGNII------METEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       215 ------~~~~~~~~lrp~~i~g~~~~~~~~------~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                            ..|+++++|+||.+.++.......      ..........+..++|+|++++.++..
T Consensus       152 a~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~  214 (241)
T PRK12428        152 AQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSD  214 (241)
T ss_pred             HHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcCh
Confidence                  358999999999999875322110      000000112356799999999887754

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.56  E-value=9.9e-15  Score=116.87  Aligned_cols=191  Identities=23%  Similarity=0.171  Sum_probs=139.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      ++-.+.++.|++||.|+++++...+.|+.|.++.|+.-+  ..+......+.+.++|... .+-+...+.+ +..++.++
T Consensus        50 ve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~sw~~~vswh~gnsfs-sn~~k~~l~g-~t~v~e~~  125 (283)
T KOG4288|consen   50 VEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSSWPTYVSWHRGNSFS-SNPNKLKLSG-PTFVYEMM  125 (283)
T ss_pred             hhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhCCCcccchhhccccc-cCcchhhhcC-CcccHHHh
Confidence            334578999999999999999999999999999998642  2222234678888899887 6667777788 99999998


Q ss_pred             CCCCCCCCcchhHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH-HHHhCCc
Q 022495          144 GFQPGWDLFAPWKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY-IRKSGIN  219 (296)
Q Consensus       144 g~~~~~~~~~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~  219 (296)
                      |-......+...+.   .+..+++.+.|+++|+|+|-.. ||-          .+..+ ..|..+|.++|.. ++.++++
T Consensus       126 ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~----------~~~i~-rGY~~gKR~AE~Ell~~~~~r  193 (283)
T KOG4288|consen  126 GGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL----------PPLIP-RGYIEGKREAEAELLKKFRFR  193 (283)
T ss_pred             cCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC----------CCccc-hhhhccchHHHHHHHHhcCCC
Confidence            86554333222222   7888899999999999998652 111          11222 3588999999964 4568899


Q ss_pred             EEEEecCcccCCCCCCcee-----------------------ecccCccccCCcCHHHHHHHHHHHhcCCCCCC
Q 022495          220 YTIIRPGGLRNEPPTGNII-----------------------METEDTLYEGTISRDQVAEVAVEALLHPESSY  270 (296)
Q Consensus       220 ~~~lrp~~i~g~~~~~~~~-----------------------~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~  270 (296)
                      -++||||+|||...-+.+.                       ++..+....+++.++++|.+.++++.+|+..|
T Consensus       194 giilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~G  267 (283)
T KOG4288|consen  194 GIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKG  267 (283)
T ss_pred             ceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCc
Confidence            9999999999974333221                       12223344568999999999999999998654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.56  E-value=6.3e-14  Score=117.91  Aligned_cols=179  Identities=18%  Similarity=0.156  Sum_probs=128.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChH----HHHHHhcC-CC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSA----KLSEAIGD-DS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~----~~~~~~~~-~~  136 (296)
                      ++-+.|||||.+||++.+++|+++|.+|++++|+++++....+    ....++.++..|.++ .+    .+++.+.+ .+
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~-~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK-GDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC-CchhHHHHHHHhcCCce
Confidence            4789999999999999999999999999999999998775432    234678899999998 44    35555665 57


Q ss_pred             CEEEEcCCCCCCCCC--c-----chhHH------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          137 EAVVCATGFQPGWDL--F-----APWKA------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       137 d~vv~~ag~~~~~~~--~-----~~~~~------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      .++|||+|..++...  .     ..++.            +-+++.|.+.+.+-||++||.+.-            .+..
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~------------~p~p  195 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL------------IPTP  195 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc------------ccCh
Confidence            799999997653210  0     01111            788899999888899999998532            1234


Q ss_pred             hhHHHHHHHHHHHHHH-------HHhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhc
Q 022495          198 VFGLTLIAKLQAEQYI-------RKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~-------~~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      .++.|+++|...+.+-       +..|+.+..+-|..+.+....-..     ..  ....+.+.+|+..+..+.
T Consensus       196 ~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~-----~s--l~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  196 LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK-----PS--LFVPSPETFAKSALNTIG  262 (312)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC-----CC--CcCcCHHHHHHHHHhhcC
Confidence            4788999999777543       246999999999999886532211     11  113455666666666555

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.55  E-value=5e-14  Score=108.43  Aligned_cols=152  Identities=22%  Similarity=0.273  Sum_probs=116.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      +.+++|..+|.||||-.|+.+++++++.+  .+|+++.|.....++    ....+.....|... -+.....+.+ +|+.
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a----t~k~v~q~~vDf~K-l~~~a~~~qg-~dV~   87 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA----TDKVVAQVEVDFSK-LSQLATNEQG-PDVL   87 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc----ccceeeeEEechHH-HHHHHhhhcC-CceE
Confidence            66788999999999999999999999998  589999988532221    33567778888877 6777777888 9999


Q ss_pred             EEcCCCCCCCC------CcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHH
Q 022495          140 VCATGFQPGWD------LFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI  213 (296)
Q Consensus       140 v~~ag~~~~~~------~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~  213 (296)
                      |+|.|..+...      ..+...+..+++++++.|+++|+++||.++....              .-.|...|-.+|+-+
T Consensus        88 FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sS--------------rFlY~k~KGEvE~~v  153 (238)
T KOG4039|consen   88 FCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSS--------------RFLYMKMKGEVERDV  153 (238)
T ss_pred             EEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCccc--------------ceeeeeccchhhhhh
Confidence            99988654321      1222333788899999999999999998643211              223778899999888


Q ss_pred             HHhCC-cEEEEecCcccCCCC
Q 022495          214 RKSGI-NYTIIRPGGLRNEPP  233 (296)
Q Consensus       214 ~~~~~-~~~~lrp~~i~g~~~  233 (296)
                      .+.++ +++|+|||.+.+...
T Consensus       154 ~eL~F~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  154 IELDFKHIIILRPGPLLGERT  174 (238)
T ss_pred             hhccccEEEEecCcceecccc
Confidence            77776 588999999988653

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.53  E-value=2.3e-13  Score=109.75  Aligned_cols=148  Identities=22%  Similarity=0.241  Sum_probs=98.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcc-hhh-----hcccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLD-KAK-----TTLSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~-~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++||||+|+||..+++.|+++| .+|+++.|+.. ...     +.+......+.++.+|++| .+.+.+++..      
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d-~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTD-PEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTS-HHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccC-HHHHHHHHHHHHhccC
Confidence            68999999999999999999998 57999999932 111     1112245689999999999 8888888754      


Q ss_pred             CCCEEEEcCCCCCCCCCcch--hHH-----------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          135 DSEAVVCATGFQPGWDLFAP--WKA-----------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~~~--~~~-----------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      +++.|||+||...+......  ...           .++.++......+.+|+.||++..-+..+            ...
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g------------q~~  148 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG------------QSA  148 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT------------BHH
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc------------hHh
Confidence            58999999997543221111  111           77878887778899999999975322212            456


Q ss_pred             HHHHHHHHHHHHH---HhCCcEEEEecCcc
Q 022495          202 TLIAKLQAEQYIR---KSGINYTIIRPGGL  228 (296)
Q Consensus       202 y~~sK~~~e~~~~---~~~~~~~~lrp~~i  228 (296)
                      |++.....+.+.+   +.+.++..|.-|..
T Consensus       149 YaaAN~~lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  149 YAAANAFLDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence            8888888887664   46888888887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.46  E-value=1.5e-12  Score=137.91  Aligned_cols=155  Identities=12%  Similarity=0.059  Sum_probs=111.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcch--------------h--------------------------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDK--------------A--------------------------  103 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~--------------~--------------------------  103 (296)
                      +++++|||||+++||..++++|+++ |++|++++|++..              +                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4789999999999999999999998 6999999998210              0                          


Q ss_pred             ----h------hcccCCCCCeEEEEcccCCChHHHHHHhcC-----CCCEEEEcCCCCCCCCCc----chhHH-------
Q 022495          104 ----K------TTLSKDNPSLQIVKADVTEGSAKLSEAIGD-----DSEAVVCATGFQPGWDLF----APWKA-------  157 (296)
Q Consensus       104 ----~------~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~vv~~ag~~~~~~~~----~~~~~-------  157 (296)
                          .      +.+...+..+.++.+|++| .+.+.+++..     ++|+||||||+.......    +.+..       
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD-~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTN-SVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                0      0001123568899999999 7777766643     499999999975432111    11111       


Q ss_pred             --HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH-----hCCcEEEEecCcccC
Q 022495          158 --INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-----SGINYTIIRPGGLRN  230 (296)
Q Consensus       158 --~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-----~~~~~~~lrp~~i~g  230 (296)
                        .++++++.....++||++||+..+-...            ....|+.+|.+...+.+.     .+++++.|.||.+.+
T Consensus      2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G~~------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813      2155 GLLSLLAALNAENIKLLALFSSAAGFYGNT------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred             HHHHHHHHHHHhCCCeEEEEechhhcCCCC------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence              7888888777677999999987542221            245699999988766532     368999999998877


Q ss_pred             CC
Q 022495          231 EP  232 (296)
Q Consensus       231 ~~  232 (296)
                      .+
T Consensus      2223 gm 2224 (2582)
T TIGR02813      2223 GM 2224 (2582)
T ss_pred             Cc
Confidence            54

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.41  E-value=1e-12  Score=100.92  Aligned_cols=201  Identities=16%  Similarity=0.133  Sum_probs=135.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      .++-..+||||.+++|...++.|..+|..|++++...++-.+..+....++.|...|++. ++++..++..      +.|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvts-ekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTS-EKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCc-HHHHHHHHHHHHhhcccee
Confidence            457789999999999999999999999999999988776555444456789999999999 7777766642      699


Q ss_pred             EEEEcCCCCCCCC-------Ccch-hHH-----------HHH----HHHHHHc-----C-CCEEEEEccceeccCccCcc
Q 022495          138 AVVCATGFQPGWD-------LFAP-WKA-----------INL----VEACRKR-----G-VNRFILISSILVNGAAMGQI  188 (296)
Q Consensus       138 ~vv~~ag~~~~~~-------~~~~-~~~-----------~~~----l~~~~~~-----~-~~~iV~~SS~~~~~~~~~~~  188 (296)
                      +.|||||+.....       .... ...           -|+    .-.|-++     | -+.||++.|..+|....+  
T Consensus        86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g--  163 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG--  163 (260)
T ss_pred             eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc--
Confidence            9999999743210       0001 111           122    2223222     1 246788888877765544  


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHH----HHH---HhCCcEEEEecCcccCCCCCCce-----eecccCccccCCcCHHHHH
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQ----YIR---KSGINYTIIRPGGLRNEPPTGNI-----IMETEDTLYEGTISRDQVA  256 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~----~~~---~~~~~~~~lrp~~i~g~~~~~~~-----~~~~~~~~~~~~i~~~Dva  256 (296)
                                ...|.++|.+.-.    +.+   ..|||++.|.||.+-++......     .....-.+....-++.+.+
T Consensus       164 ----------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eya  233 (260)
T KOG1199|consen  164 ----------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYA  233 (260)
T ss_pred             ----------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHH
Confidence                      4568899987642    223   35899999999988776433211     0111112223356778888


Q ss_pred             HHHHHHhcCCCCCCCeEEEEe
Q 022495          257 EVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       257 ~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      ..+-.++++|-..+.+..+-+
T Consensus       234 hlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  234 HLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             HHHHHHHhCcccCCeEEEecc
Confidence            888888898887777665543

>PRK06720 hypothetical protein; Provisional

Probab=99.41  E-value=3.1e-12  Score=101.70  Aligned_cols=117  Identities=15%  Similarity=0.126  Sum_probs=81.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      .+++|+++||||+++||..+++.|+++|++|++++|+.+...+.   +......+.++.+|++| .+.+.++++.     
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~v~~~~~~~   91 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK-QGDWQRVISITLNAF   91 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999987654321   11123457788999999 7766654321     


Q ss_pred             -CCCEEEEcCCCCCCCCCc-----chhHH----------HHHHHHHHHcC-------CCEEEEEcccee
Q 022495          135 -DSEAVVCATGFQPGWDLF-----APWKA----------INLVEACRKRG-------VNRFILISSILV  180 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~-----~~~~~----------~~~l~~~~~~~-------~~~iV~~SS~~~  180 (296)
                       ++|++|||||........     ..++.          +.+...+++.+       .+||..+||.++
T Consensus        92 G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         92 SRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence             499999999964321111     11111          55555555543       468888888753

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.33  E-value=1.2e-11  Score=100.51  Aligned_cols=217  Identities=19%  Similarity=0.146  Sum_probs=145.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh-----ccc----CCCCCeEEEEcccCCChHHHHHHhcC-C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLS----KDNPSLQIVKADVTEGSAKLSEAIGD-D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~-~  135 (296)
                      .|..||||-||.=|++|++.|+..|++|..+.|..+....     +..    ..........+|++| ...+.+.+.. +
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTD-ss~L~k~I~~ik  106 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTD-SSCLIKLISTIK  106 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccc-hHHHHHHHhccC
Confidence            4689999999999999999999999999999987654321     111    123567788899999 8888888876 6


Q ss_pred             CCEEEEcCCCCCC---CCCcch------hHHHHHHHHHHHcCC---CEEEEEccceeccCccCccCChhhhhhhhhHHHH
Q 022495          136 SEAVVCATGFQPG---WDLFAP------WKAINLVEACRKRGV---NRFILISSILVNGAAMGQILNPAYIFLNVFGLTL  203 (296)
Q Consensus       136 ~d~vv~~ag~~~~---~~~~~~------~~~~~~l~~~~~~~~---~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~  203 (296)
                      ++-|+|.|+-.+-   .+..+.      .-..+++++.+..+.   -+|--.||...||.....+..+ ..|.-|.++|+
T Consensus       107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE-~TPFyPRSPYa  185 (376)
T KOG1372|consen  107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSE-TTPFYPRSPYA  185 (376)
T ss_pred             chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCccc-CCCCCCCChhH
Confidence            8899998875431   111111      111889999888762   3788889988999766554443 44666788999


Q ss_pred             HHHHHHHHHH----HHhCCcEEEEecCcccCCC---CCCce-------------------eecccCccccCCcCHHHHHH
Q 022495          204 IAKLQAEQYI----RKSGINYTIIRPGGLRNEP---PTGNI-------------------IMETEDTLYEGTISRDQVAE  257 (296)
Q Consensus       204 ~sK~~~e~~~----~~~~~~~~~lrp~~i~g~~---~~~~~-------------------~~~~~~~~~~~~i~~~Dva~  257 (296)
                      ++|..+-.++    +.+++   .-+.|..+...   ....+                   +..+..+....|-|..|.++
T Consensus       186 ~aKmy~~WivvNyREAYnm---fAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVE  262 (376)
T KOG1372|consen  186 AAKMYGYWIVVNYREAYNM---FACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVE  262 (376)
T ss_pred             HhhhhheEEEEEhHHhhcc---eeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHH
Confidence            9998764322    23332   11122222211   01111                   11122233356889999999


Q ss_pred             HHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHH
Q 022495          258 VAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGS  292 (296)
Q Consensus       258 ~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~  292 (296)
                      +++.+|.++.  ...|-|..   ++..+++|+++.
T Consensus       263 AMW~mLQ~d~--PdDfViAT---ge~hsVrEF~~~  292 (376)
T KOG1372|consen  263 AMWLMLQQDS--PDDFVIAT---GEQHSVREFCNL  292 (376)
T ss_pred             HHHHHHhcCC--CCceEEec---CCcccHHHHHHH
Confidence            9999988764  34577777   799999999875

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.25  E-value=2.2e-10  Score=91.62  Aligned_cols=155  Identities=17%  Similarity=0.215  Sum_probs=107.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      |+++||||+|++|. +++.|+++|++|++++|++++...+..  ....++.++.+|++| .+++.+++++      ++|.
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d-~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHD-DDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCeE
Confidence            57999999987765 999999999999999998776554321  123468889999999 8887776643      4888


Q ss_pred             EEEcCCCCCCCCCcchhHHHHHHHHHHHcCCC----EEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH
Q 022495          139 VVCATGFQPGWDLFAPWKAINLVEACRKRGVN----RFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR  214 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~----~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  214 (296)
                      +|+.+-...         .+++.++|++.|++    +||++=...+-.        +              +...+... 
T Consensus        79 lv~~vh~~~---------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~--------~--------------~~~~~~~~-  126 (177)
T PRK08309         79 AVAWIHSSA---------KDALSVVCRELDGSSETYRLFHVLGSAASD--------P--------------RIPSEKIG-  126 (177)
T ss_pred             EEEeccccc---------hhhHHHHHHHHccCCCCceEEEEeCCcCCc--------h--------------hhhhhhhh-
Confidence            887764321         16899999999988    888864332100        0              11122222 


Q ss_pred             HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          215 KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       215 ~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      .....|.=|..|++....             ...|++=+++++.+++++.++..
T Consensus       127 ~~~~~~~~i~lgf~~~~~-------------~~rwlt~~ei~~gv~~~~~~~~~  167 (177)
T PRK08309        127 PARCSYRRVILGFVLEDT-------------YSRWLTHEEISDGVIKAIESDAD  167 (177)
T ss_pred             hcCCceEEEEEeEEEeCC-------------ccccCchHHHHHHHHHHHhcCCC
Confidence            244567767677665421             23589999999999999987653

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.23  E-value=1.2e-10  Score=93.80  Aligned_cols=206  Identities=18%  Similarity=0.244  Sum_probs=123.7

Q ss_pred             cCCCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEcCcc---hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .|+||++||+|-  ...|+..+++.|.++|+++......+.   +..++.+ ....-.+++||+++ .+.+.+.|..   
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~-~~~s~~v~~cDV~~-d~~i~~~f~~i~~   80 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAE-ELGSDLVLPCDVTN-DESIDALFATIKK   80 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHh-hccCCeEEecCCCC-HHHHHHHHHHHHH
Confidence            467999999986  468999999999999999998877652   2222222 22345678999999 7777776653   


Q ss_pred             ---CCCEEEEcCCCCCCCC----Ccc----hhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChh
Q 022495          135 ---DSEAVVCATGFQPGWD----LFA----PWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~----~~~----~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                         ++|.|||+.++.+..+    ..+    .+..         ..+.++++..  +-+.+|-++=.   |...       
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYl---gs~r-------  150 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYL---GSER-------  150 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEec---ccee-------
Confidence               5999999998765321    111    0111         2333333221  12456654422   2111       


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC-----ceeec-ccCccccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG-----NIIME-TEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~-----~~~~~-~~~~~~~~~i~~~Dva~~i  259 (296)
                        ..+.|+.-+..|++.|.-+|       ..|+|++.|..|.|.+--..+     .+... .........++.+||+...
T Consensus       151 --~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA  228 (259)
T COG0623         151 --VVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTA  228 (259)
T ss_pred             --ecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhH
Confidence              12235566789999996443       369999999999887632111     11111 1112223468899999986


Q ss_pred             HHHhcCCCCCCCeEEEEeCCCCCC
Q 022495          260 VEALLHPESSYKVVEIISRVDAPK  283 (296)
Q Consensus       260 ~~~l~~~~~~~~~~~i~~~~~~~~  283 (296)
                      +.++.+ -..+.+.++...|.|..
T Consensus       229 ~fLlSd-LssgiTGei~yVD~G~~  251 (259)
T COG0623         229 AFLLSD-LSSGITGEIIYVDSGYH  251 (259)
T ss_pred             HHHhcc-hhcccccceEEEcCCce
Confidence            666654 33455555544443443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.21  E-value=3.7e-11  Score=96.60  Aligned_cols=188  Identities=15%  Similarity=0.113  Sum_probs=114.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEE--EEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKA--GVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      ++.+||||++.+||..++..+.+++.+...  ..|.....+.+.-..........+|+++ ...+.+.+.-      +.|
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e-~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITE-EQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHH-HHHHHHHHhhhhhcCCcee
Confidence            578999999999999999999988865443  3444333222111122233344556655 3333333321      589


Q ss_pred             EEEEcCCCCCCCC-------CcchhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhh
Q 022495          138 AVVCATGFQPGWD-------LFAPWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       138 ~vv~~ag~~~~~~-------~~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      .||||||...+-.       ....++.             ..+++..++.. .+-+|++||..+.            .|.
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav------------~p~  152 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV------------RPF  152 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh------------ccc
Confidence            9999999654211       1111111             44455555553 4689999997532            346


Q ss_pred             hhhHHHHHHHHHHHHHHH-----Hh-CCcEEEEecCcccCCCCCC---ceeeccc-------CccccCCcCHHHHHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR-----KS-GINYTIIRPGGLRNEPPTG---NIIMETE-------DTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-----~~-~~~~~~lrp~~i~g~~~~~---~~~~~~~-------~~~~~~~i~~~Dva~~i~  260 (296)
                      +.++.|+.+|++.+.|.+     ++ ++++..++||.+.+++...   ...+.+.       .......++..+.|+.+.
T Consensus       153 ~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~  232 (253)
T KOG1204|consen  153 SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLA  232 (253)
T ss_pred             cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHH
Confidence            679999999999998764     33 8899999999998864211   0001000       001123567778888888


Q ss_pred             HHhcCC
Q 022495          261 EALLHP  266 (296)
Q Consensus       261 ~~l~~~  266 (296)
                      .+++..
T Consensus       233 ~L~e~~  238 (253)
T KOG1204|consen  233 KLLEKG  238 (253)
T ss_pred             HHHHhc
Confidence            887765

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.17  E-value=9.8e-10  Score=96.74  Aligned_cols=80  Identities=15%  Similarity=0.108  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCchHHHH--HHHHHHHCCCeEEEEEcCcch---------------hhhcccCCCCCeEEEEcccCCChHHH
Q 022495           66 QKKIFVAGATGSSGKR--IVEQLLAKGFAVKAGVRDLDK---------------AKTTLSKDNPSLQIVKADVTEGSAKL  128 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~--l~~~L~~~g~~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~D~~d~~~~~  128 (296)
                      +|++|||||++++|.+  +++.| ++|++|+++++..+.               ..+.....+..+..+.+|+++ .+.+
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~E~v  118 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-DEIK  118 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHH
Confidence            6899999999999999  89999 999999888853311               111222123456788999999 6666


Q ss_pred             HHHhcC------CCCEEEEcCCCCC
Q 022495          129 SEAIGD------DSEAVVCATGFQP  147 (296)
Q Consensus       129 ~~~~~~------~~d~vv~~ag~~~  147 (296)
                      .++++.      ++|+||||+|...
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCC
Confidence            555432      4999999998753

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.09  E-value=6.8e-10  Score=98.11  Aligned_cols=99  Identities=24%  Similarity=0.323  Sum_probs=83.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      +|+|+|.|+ |+||+.++..|+++| .+|++.+|+.++..+.......+++..+.|+.| .+++.+++++ .|+||+++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~~-~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIKD-FDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHhc-CCEEEEeCC
Confidence            478999998 999999999999999 899999999988877654344589999999999 8999999999 899999986


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ....         .+++++|.+.|+ ++|=+|-
T Consensus        78 ~~~~---------~~i~ka~i~~gv-~yvDts~  100 (389)
T COG1748          78 PFVD---------LTILKACIKTGV-DYVDTSY  100 (389)
T ss_pred             chhh---------HHHHHHHHHhCC-CEEEccc
Confidence            4321         578888888886 5555443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.08  E-value=1.5e-09  Score=88.73  Aligned_cols=165  Identities=18%  Similarity=0.169  Sum_probs=108.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-----eEEEEEcCcchhhhccc-------CCCCCeEEEEcccCCChHHHHHHh
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-----AVKAGVRDLDKAKTTLS-------KDNPSLQIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~D~~d~~~~~~~~~  132 (296)
                      +.|.+||||++++||.++|..|++...     ++++..|+.+++++...       .....++++..|+++ ..++.++.
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sN-m~Sv~~A~   80 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSN-MQSVFRAS   80 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhh-HHHHHHHH
Confidence            357899999999999999999998643     46677899887765331       224578999999999 66666555


Q ss_pred             cC------CCCEEEEcCCCCCCCCCcc-------------------------------------hhHH-------HHHHH
Q 022495          133 GD------DSEAVVCATGFQPGWDLFA-------------------------------------PWKA-------INLVE  162 (296)
Q Consensus       133 ~~------~~d~vv~~ag~~~~~~~~~-------------------------------------~~~~-------~~~l~  162 (296)
                      ++      ++|.|+.|||........-                                     ..++       +.+.+
T Consensus        81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            43      5999999999633110000                                     0000       55555


Q ss_pred             HHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHH----H---HhCCcEEEEecCcccCCCC
Q 022495          163 ACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI----R---KSGINYTIIRPGGLRNEPP  233 (296)
Q Consensus       163 ~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~----~---~~~~~~~~lrp~~i~g~~~  233 (296)
                      ........++|.+||..+-.....   -++......-..|..||.+.+-+-    +   ..|+.-.++.||...+...
T Consensus       161 ll~~~~~~~lvwtSS~~a~kk~ls---leD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~  235 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRMARKKNLS---LEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSF  235 (341)
T ss_pred             HhhcCCCCeEEEEeecccccccCC---HHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchh
Confidence            555544458999999865322211   122223334456888999887543    1   3477788999997766543

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.03  E-value=9.8e-10  Score=88.31  Aligned_cols=212  Identities=14%  Similarity=0.118  Sum_probs=132.4

Q ss_pred             CCeEEEEcCCchHHHHHHH-----HHHHCC----CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVE-----QLLAKG----FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      +++.++-+++|+|+..|..     ++-+.+    |.|++++|.+.+.         ++++-+.|..- ..  -....+ +
T Consensus        12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~---------ritw~el~~~G-ip--~sc~a~-v   78 (315)
T KOG3019|consen   12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA---------RITWPELDFPG-IP--ISCVAG-V   78 (315)
T ss_pred             cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc---------ccccchhcCCC-Cc--eehHHH-H
Confidence            4677888899999988876     444444    8899999998763         33333333222 10  011112 3


Q ss_pred             CEEEEcCCC-CCCCCCcchhHH--------HHHHHHHHHcC--CCEEEEEccceeccCccCccCChhhhhhhhhHH--HH
Q 022495          137 EAVVCATGF-QPGWDLFAPWKA--------INLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFLNVFGL--TL  203 (296)
Q Consensus       137 d~vv~~ag~-~~~~~~~~~~~~--------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~--y~  203 (296)
                      +.+.+|+.. .+.|.+....++        +.++++..+..  .+.+|++|..++|-.......+++..... +..  --
T Consensus        79 na~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qg-fd~~srL  157 (315)
T KOG3019|consen   79 NAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQG-FDILSRL  157 (315)
T ss_pred             hhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCC-hHHHHHH
Confidence            344445442 234444444443        77888877765  45899999999998766655555432211 211  11


Q ss_pred             HHHHHHHHHHHHhCCcEEEEecCcccCCCCCC--ceee---------cccCccccCCcCHHHHHHHHHHHhcCCCCCCCe
Q 022495          204 IAKLQAEQYIRKSGINYTIIRPGGLRNEPPTG--NIIM---------ETEDTLYEGTISRDQVAEVAVEALLHPESSYKV  272 (296)
Q Consensus       204 ~sK~~~e~~~~~~~~~~~~lrp~~i~g~~~~~--~~~~---------~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~  272 (296)
                      ..|+....+......++++||.|-+.|.....  .++.         .+....+.+|||++|++..+..+|+++...| .
T Consensus       158 ~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~G-V  236 (315)
T KOG3019|consen  158 CLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKG-V  236 (315)
T ss_pred             HHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCc-e
Confidence            23444333333456899999999999865321  1111         1233455689999999999999999987555 5


Q ss_pred             EEEEeCCCCCCCCHHHHHHHhhc
Q 022495          273 VEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       273 ~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .|-..   +++.+..|+.+.+.+
T Consensus       237 iNgvA---P~~~~n~Ef~q~lg~  256 (315)
T KOG3019|consen  237 INGVA---PNPVRNGEFCQQLGS  256 (315)
T ss_pred             ecccC---CCccchHHHHHHHHH
Confidence            55555   799999999988753

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.96  E-value=8.9e-09  Score=89.81  Aligned_cols=167  Identities=14%  Similarity=0.015  Sum_probs=100.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +++++|+|+|++|.||+.++..|+.++  .++++++++...... ....+........+.+| ...+.+.+++ +|+||+
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a-~Dl~~~~~~~~v~~~td-~~~~~~~l~g-aDvVVi   82 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVA-ADLSHIDTPAKVTGYAD-GELWEKALRG-ADLVLI   82 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccc-cchhhcCcCceEEEecC-CCchHHHhCC-CCEEEE
Confidence            467899999999999999999998665  679999983222111 10011111233456666 4556788999 999999


Q ss_pred             cCCCCCCCCC----cchhHH---HHHHHHHHHcCCCEEEEEccceeccCccCcc-CChhhhhhhhhHHHHHHHHHH----
Q 022495          142 ATGFQPGWDL----FAPWKA---INLVEACRKRGVNRFILISSILVNGAAMGQI-LNPAYIFLNVFGLTLIAKLQA----  209 (296)
Q Consensus       142 ~ag~~~~~~~----~~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~-~~~~~~~~~~~~~y~~sK~~~----  209 (296)
                      +||.......    ....+.   +++++++++++.+++|+++|-.+..-..-.. .-......++...||.+-...    
T Consensus        83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r  162 (321)
T PTZ00325         83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR  162 (321)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence            9997544221    111211   8999999999999999999975422110000 000001122333444441111    


Q ss_pred             HHHHHHhCCcEEEEecCcccCCCCC
Q 022495          210 EQYIRKSGINYTIIRPGGLRNEPPT  234 (296)
Q Consensus       210 e~~~~~~~~~~~~lrp~~i~g~~~~  234 (296)
                      ..+.+..++....|. +++.|+...
T Consensus       163 ~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        163 KFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHhCcChhheE-EEEEeecCC
Confidence            112245678777777 788886544

>PRK09620 hypothetical protein; Provisional

Probab=98.90  E-value=5.8e-09  Score=86.79  Aligned_cols=80  Identities=21%  Similarity=0.293  Sum_probs=57.0

Q ss_pred             CCCCeEEEEcCC----------------chHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH
Q 022495           64 VKQKKIFVAGAT----------------GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK  127 (296)
Q Consensus        64 ~~~~~ilVtGa~----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~  127 (296)
                      |++|+||||+|.                ||+|+++|++|+++|++|+++++.......... ....+..+.+|... .+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~-~~~~~~~V~s~~d~-~~~   78 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN-NQLELHPFEGIIDL-QDK   78 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC-CceeEEEEecHHHH-HHH
Confidence            358999999886                999999999999999999998764321111111 12234456665444 466


Q ss_pred             HHHHhcC-CCCEEEEcCCC
Q 022495          128 LSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus       128 ~~~~~~~-~~d~vv~~ag~  145 (296)
                      +.+++.. ++|+|||+|+.
T Consensus        79 l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         79 MKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             HHHHhcccCCCEEEECccc
Confidence            7777853 49999999986

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.90  E-value=1.4e-07  Score=78.71  Aligned_cols=73  Identities=21%  Similarity=0.299  Sum_probs=51.2

Q ss_pred             EEE-cCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC-hHHHHHHhcCCCCEEEEcCCCCC
Q 022495           70 FVA-GATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGDDSEAVVCATGFQP  147 (296)
Q Consensus        70 lVt-Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~d~vv~~ag~~~  147 (296)
                      .|| .+||++|+++|++|+++|++|+++.|......  .  ...++.++.++..+. .+.+.+.+++ +|+||||||+..
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~--~~~~v~~i~v~s~~~m~~~l~~~~~~-~DivIh~AAvsd   93 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--E--PHPNLSIIEIENVDDLLETLEPLVKD-HDVLIHSMAVSD   93 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--C--CCCCeEEEEEecHHHHHHHHHHHhcC-CCEEEeCCccCC
Confidence            344 67889999999999999999999987643211  0  124567766543320 2456666777 999999999753

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.85  E-value=1.9e-07  Score=83.99  Aligned_cols=173  Identities=9%  Similarity=0.126  Sum_probs=101.4

Q ss_pred             ccCCCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCCh
Q 022495           62 VSVKQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS  125 (296)
Q Consensus        62 ~~~~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~  125 (296)
                      .++++|+|+||||                +|.+|.++|++|.++|++|++++++.+ ..     ...+  +..+|+++ .
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~~~~--~~~~dv~~-~  254 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----TPAG--VKRIDVES-A  254 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----CCCC--cEEEccCC-H
Confidence            4578999999999                888999999999999999999988753 11     1112  34679998 7


Q ss_pred             HHHHHHhcC---CCCEEEEcCCCCCCCCC---------cc-hhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCc
Q 022495          126 AKLSEAIGD---DSEAVVCATGFQPGWDL---------FA-PWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       126 ~~~~~~~~~---~~d~vv~~ag~~~~~~~---------~~-~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~  187 (296)
                      +.+.+++..   ++|++|||||+......         .. ....     -.+++..++...++-+.++-...       
T Consensus       255 ~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaaE-------  327 (399)
T PRK05579        255 QEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVGFAAE-------  327 (399)
T ss_pred             HHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEEEccC-------
Confidence            666655532   39999999996321110         00 0001     45666665543222133332211       


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEecC---cccCCCCCCceeecccCc-cccCCcCHHHHHHHHHHHh
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG---GLRNEPPTGNIIMETEDT-LYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp~---~i~g~~~~~~~~~~~~~~-~~~~~i~~~Dva~~i~~~l  263 (296)
                         .+    +      . ...+.+-+++.+.++++...=   .-+|......+++..... ...+..+-.++|+.++..+
T Consensus       328 ---t~----~------~-~~~A~~kl~~k~~D~ivaN~i~~~~~fg~~~n~~~ii~~~~~~~~~~~~~K~~iA~~i~~~i  393 (399)
T PRK05579        328 ---TG----D------V-LEYARAKLKRKGLDLIVANDVSAGGGFGSDDNEVTLIWSDGGEVKLPLMSKLELARRLLDEI  393 (399)
T ss_pred             ---Cc----h------H-HHHHHHHHHHcCCeEEEEecCCcCCCcCCCceEEEEEECCCcEEEcCCCCHHHHHHHHHHHH
Confidence               00    0      1 112223345678888877652   223433333334433222 2245678899999998877


Q ss_pred             c
Q 022495          264 L  264 (296)
Q Consensus       264 ~  264 (296)
                      .
T Consensus       394 ~  394 (399)
T PRK05579        394 A  394 (399)
T ss_pred             H
Confidence            4

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.81  E-value=2.5e-08  Score=90.15  Aligned_cols=95  Identities=28%  Similarity=0.435  Sum_probs=73.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC-C-eEEEEEcCcchhhhcccC-CCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKG-F-AVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      |+|.|| |++|+.+++.|++++ . +|++.+|+.++++++... ...++.++++|+.| .+++.+++++ .|+||||+|.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~-~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-PESLAELLRG-CDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-HHHHHHHHTT-SSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-HHHHHHHHhc-CCEEEECCcc
Confidence            799999 999999999999987 4 899999999988776543 45789999999999 8999999999 9999999985


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEEEc
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFILIS  176 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~S  176 (296)
                      .         ....++++|.+.|+ ++|-+|
T Consensus        78 ~---------~~~~v~~~~i~~g~-~yvD~~   98 (386)
T PF03435_consen   78 F---------FGEPVARACIEAGV-HYVDTS   98 (386)
T ss_dssp             G---------GHHHHHHHHHHHT--EEEESS
T ss_pred             c---------hhHHHHHHHHHhCC-Ceeccc
Confidence            3         12568888888886 666644

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00106 malate dehydrogenase

Probab=98.80  E-value=6.4e-08  Score=84.54  Aligned_cols=161  Identities=16%  Similarity=0.077  Sum_probs=95.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      .+||.|||++|.||+.++..|+.++  .+++++++++.... .....+........++.+ .+++.+.+++ +|+|||+|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~-a~Dl~~~~~~~~i~~~~~-~~d~~~~l~~-aDiVVitA   94 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV-AADVSHINTPAQVRGFLG-DDQLGDALKG-ADLVIIPA   94 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee-EchhhhCCcCceEEEEeC-CCCHHHHcCC-CCEEEEeC
Confidence            4699999999999999999999776  47999998772111 111011111223335444 4457888999 99999999


Q ss_pred             CCCCCCCCcc----hhHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCCh---hhhhhhhhHHHHHHHHHHHHH-
Q 022495          144 GFQPGWDLFA----PWKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNP---AYIFLNVFGLTLIAKLQAEQY-  212 (296)
Q Consensus       144 g~~~~~~~~~----~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~---~~~~~~~~~~y~~sK~~~e~~-  212 (296)
                      |.........    ..+.   +++++.+++.+...+|+++|--+-+..  .....   .....++...||.++...+++ 
T Consensus        95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~--~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~  172 (323)
T PLN00106         95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTV--PIAAEVLKKAGVYDPKKLFGVTTLDVVRAN  172 (323)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccH--HHHHHHHHHcCCCCcceEEEEecchHHHHH
Confidence            9765422111    1111   899999999998888888874321100  00000   011122334455555444432 


Q ss_pred             ---HHHhCCcEEEEecCcccCCC
Q 022495          213 ---IRKSGINYTIIRPGGLRNEP  232 (296)
Q Consensus       213 ---~~~~~~~~~~lrp~~i~g~~  232 (296)
                         .+..+++...|. ++++|..
T Consensus       173 ~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        173 TFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHHhCCChhheE-EEEEEeC
Confidence               245677766664 4566654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.72  E-value=1.1e-07  Score=83.41  Aligned_cols=109  Identities=10%  Similarity=0.059  Sum_probs=67.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-------CeEEEEEcCcch--hhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-------FAVKAGVRDLDK--AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      .+|+||||+|++|++++..|+..+       .+|+++++++..  +................|+.+ ...+.+.+++ +|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~-~~~~~~~l~~-aD   80 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA-TTDPEEAFKD-VD   80 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee-cCCHHHHhCC-CC
Confidence            479999999999999999999854       589999996532  211100000111122335554 4557788899 99


Q ss_pred             EEEEcCCCCCCCCC--cchh--HH---HHHHHHHHHcC--CCEEEEEcc
Q 022495          138 AVVCATGFQPGWDL--FAPW--KA---INLVEACRKRG--VNRFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~--~~~~--~~---~~~l~~~~~~~--~~~iV~~SS  177 (296)
                      +|||+||.......  .+..  +.   +.+.+.+.+..  -..+|.+|.
T Consensus        81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            99999998654322  1111  11   66767777763  335555554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.70  E-value=5.8e-08  Score=79.19  Aligned_cols=81  Identities=25%  Similarity=0.293  Sum_probs=64.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ++++++++|+||+|++|+.+++.|++.|++|++++|+.++..++...  ...+.....+|..| .+.+.+.+.+ +|+||
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~-~diVi  102 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAIKG-ADVVF  102 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHHhc-CCEEE
Confidence            56789999999999999999999999999999999998766543321  11245566778888 8888888998 99999


Q ss_pred             EcCCC
Q 022495          141 CATGF  145 (296)
Q Consensus       141 ~~ag~  145 (296)
                      ++...
T Consensus       103 ~at~~  107 (194)
T cd01078         103 AAGAA  107 (194)
T ss_pred             ECCCC
Confidence            87653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.66  E-value=1.7e-06  Score=77.62  Aligned_cols=171  Identities=12%  Similarity=0.135  Sum_probs=100.2

Q ss_pred             ccCCCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCCh
Q 022495           62 VSVKQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS  125 (296)
Q Consensus        62 ~~~~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~  125 (296)
                      .++++++++||||                ||.+|.+++++|..+|++|+++.+.....   .   ...+  ...|+.+ .
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~---~~~~--~~~~v~~-~  251 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---T---PPGV--KSIKVST-A  251 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---C---CCCc--EEEEecc-H
Confidence            3578999999999                35699999999999999999988765421   1   1222  4578888 6


Q ss_pred             HHH-HHHh----cCCCCEEEEcCCCCCCCCC------cch----hHH-----HHHHHHHHHcCCCEEEEEccceeccCcc
Q 022495          126 AKL-SEAI----GDDSEAVVCATGFQPGWDL------FAP----WKA-----INLVEACRKRGVNRFILISSILVNGAAM  185 (296)
Q Consensus       126 ~~~-~~~~----~~~~d~vv~~ag~~~~~~~------~~~----~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~  185 (296)
                      +.+ .+++    .. +|++|+|||+......      ...    ...     -.+++..++...+ .+.++-....+   
T Consensus       252 ~~~~~~~~~~~~~~-~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~-~~lvgF~aEt~---  326 (390)
T TIGR00521       252 EEMLEAALNELAKD-FDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKH-QVIVGFKAETN---  326 (390)
T ss_pred             HHHHHHHHHhhccc-CCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCC-cEEEEEEcCCC---
Confidence            666 4333    34 9999999997421110      000    001     4555555544322 23333321100   


Q ss_pred             CccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEecCc--ccCCCCCCceeecccCccccCCcCHHHHHHHHHHHh
Q 022495          186 GQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG--LRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       186 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp~~--i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                             .      .    -...+.+-+++.+.++++...-.  -+|.....-+++........+..+-.++|+.+++.+
T Consensus       327 -------~------~----l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~~n~~~li~~~~~~~~~~~~K~~iA~~i~~~~  389 (390)
T TIGR00521       327 -------D------D----LIKYAKEKLKKKNLDMIVANDVSQRGFGSDENEVYIFSKHGHKELPLMSKLEVAERILDEI  389 (390)
T ss_pred             -------c------H----HHHHHHHHHHHcCCCEEEEccCCccccCCCCcEEEEEECCCeEEeCCCCHHHHHHHHHHHh
Confidence                   0      0    12223333557888988776532  244443333444443333445678899999988765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.58  E-value=7.4e-07  Score=77.89  Aligned_cols=107  Identities=19%  Similarity=0.154  Sum_probs=69.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHH-C--CCeEEEEEcCcchhhhcccCCC-CCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLA-K--GFAVKAGVRDLDKAKTTLSKDN-PSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      |+|+|+||+|.+|++++..|.. .  ++.+++++|++......+...+ .....+.+  .+ .+.+.+.+++ +|+||.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~-~~d~~~~l~~-~DiVIit   76 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FS-GEDPTPALEG-ADVVLIS   76 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eC-CCCHHHHcCC-CCEEEEc
Confidence            6899999999999999998855 2  4578888887542110011011 11223333  22 2345667788 9999999


Q ss_pred             CCCCCCCCCcc----hhH---HHHHHHHHHHcCCCEEEEEcc
Q 022495          143 TGFQPGWDLFA----PWK---AINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       143 ag~~~~~~~~~----~~~---~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +|..+......    ..+   .+++++++++.+.+++|.+.|
T Consensus        77 aG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         77 AGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99865432111    111   188999999999888888776

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.58  E-value=6.5e-07  Score=75.68  Aligned_cols=97  Identities=18%  Similarity=0.216  Sum_probs=69.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |+|+|+||||. |+.+++.|.++|++|++..+++........   .+...+..+..| .+.+.+.+.+ ++|+||+.+..
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~---~g~~~v~~g~l~-~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI---HQALTVHTGALD-PQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc---cCCceEEECCCC-HHHHHHHHHhcCCCEEEEcCCH
Confidence            58999999999 999999999999999999999865443321   223345566677 6778888765 69999998753


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                      .      ...-.+++.++|++.|+..+=|
T Consensus        76 f------A~~is~~a~~a~~~~~ipylR~   98 (256)
T TIGR00715        76 F------AAQITTNATAVCKELGIPYVRF   98 (256)
T ss_pred             H------HHHHHHHHHHHHHHhCCcEEEE
Confidence            1      1111177777777777654433

This enzyme was found to be a monomer by gel filtration.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.55  E-value=8.7e-07  Score=76.75  Aligned_cols=79  Identities=28%  Similarity=0.301  Sum_probs=61.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCc---chhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDL---DKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      ++++++++|+|| |++|++++..|++.|++ |+++.|+.   ++.+++.   ......+.+..+|+.| .+.+.+.+.. 
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~-~~~~~~~~~~-  199 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND-TEKLKAEIAS-  199 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh-hhHHHhhhcc-
Confidence            456889999998 89999999999999986 99999986   4444322   1122345566789888 7778888888 


Q ss_pred             CCEEEEcCC
Q 022495          136 SEAVVCATG  144 (296)
Q Consensus       136 ~d~vv~~ag  144 (296)
                      .|+||||..
T Consensus       200 ~DilINaTp  208 (289)
T PRK12548        200 SDILVNATL  208 (289)
T ss_pred             CCEEEEeCC
Confidence            999999874

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.55  E-value=3.3e-06  Score=70.43  Aligned_cols=66  Identities=18%  Similarity=0.278  Sum_probs=45.8

Q ss_pred             EEE-cCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-------hcCCCCEEEE
Q 022495           70 FVA-GATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-------IGDDSEAVVC  141 (296)
Q Consensus        70 lVt-Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------~~~~~d~vv~  141 (296)
                      .|| .++|+||+++|+.|+++|++|+++++... ..     ...   ...+|+.+ .+.+.+.       ++. +|++||
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~-----~~~---~~~~Dv~d-~~s~~~l~~~v~~~~g~-iDiLVn   86 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK-----PEP---HPNLSIRE-IETTKDLLITLKELVQE-HDILIH   86 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc-----ccc---CCcceeec-HHHHHHHHHHHHHHcCC-CCEEEE
Confidence            344 45899999999999999999999876321 10     001   13478887 5555443       344 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      |||+.
T Consensus        87 nAgv~   91 (227)
T TIGR02114        87 SMAVS   91 (227)
T ss_pred             CCEec
Confidence            99964

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.51  E-value=2.9e-07  Score=79.04  Aligned_cols=77  Identities=30%  Similarity=0.420  Sum_probs=65.1

Q ss_pred             eEEEEcCCchHHHHHHHHHHH----CCCeEEEEEcCcchhhhcccC-------CCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLA----KGFAVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      -++|.||+||.|..+++++.+    .|...-+..|+++++.+.+..       ...+..++.+|..| ++++.+..++ +
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n-~~Sl~emak~-~   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSAN-EASLDEMAKQ-A   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCC-HHHHHHHHhh-h
Confidence            479999999999999999999    688888899999998865532       11334488999999 8999999998 9


Q ss_pred             CEEEEcCCCC
Q 022495          137 EAVVCATGFQ  146 (296)
Q Consensus       137 d~vv~~ag~~  146 (296)
                      .+|+||+|..
T Consensus        85 ~vivN~vGPy   94 (423)
T KOG2733|consen   85 RVIVNCVGPY   94 (423)
T ss_pred             EEEEeccccc
Confidence            9999999964

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.43  E-value=4.5e-07  Score=79.43  Aligned_cols=74  Identities=22%  Similarity=0.328  Sum_probs=56.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHC-C-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAK-G-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ++++++|+||||+|+||+.++++|+++ | .+++++.|+..++..+..      ++..+|+.+    +.+++.+ +|+||
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~------el~~~~i~~----l~~~l~~-aDiVv  220 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA------ELGGGKILS----LEEALPE-ADIVV  220 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH------HhccccHHh----HHHHHcc-CCEEE
Confidence            578899999999999999999999865 5 589999998776654331      111234433    5677888 99999


Q ss_pred             EcCCCCC
Q 022495          141 CATGFQP  147 (296)
Q Consensus       141 ~~ag~~~  147 (296)
                      |+++...
T Consensus       221 ~~ts~~~  227 (340)
T PRK14982        221 WVASMPK  227 (340)
T ss_pred             ECCcCCc
Confidence            9998654

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.35  E-value=6.1e-06  Score=68.75  Aligned_cols=99  Identities=32%  Similarity=0.423  Sum_probs=73.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag~  145 (296)
                      |+++|.|+ |-+|+.+|+.|.++|++|++++++++...+... .......+.+|-+| .+.++++ +.. +|+++...|-
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~-~~~~~~~v~gd~t~-~~~L~~agi~~-aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLA-DELDTHVVIGDATD-EDVLEEAGIDD-ADAVVAATGN   76 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh-hhcceEEEEecCCC-HHHHHhcCCCc-CCEEEEeeCC
Confidence            57889986 999999999999999999999999988766432 23578999999999 8888887 566 9999988762


Q ss_pred             CCCCCCcchhHHHHHHHHH-HHcCCCEEEEEcc
Q 022495          146 QPGWDLFAPWKAINLVEAC-RKRGVNRFILISS  177 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~-~~~~~~~iV~~SS  177 (296)
                      .       ..+ .-++..+ ++.|++++|---.
T Consensus        77 d-------~~N-~i~~~la~~~~gv~~viar~~  101 (225)
T COG0569          77 D-------EVN-SVLALLALKEFGVPRVIARAR  101 (225)
T ss_pred             C-------HHH-HHHHHHHHHhcCCCcEEEEec
Confidence            1       111 2233333 4468777765433

>cd00704 MDH Malate dehydrogenase

Probab=98.34  E-value=6.8e-06  Score=72.12  Aligned_cols=96  Identities=13%  Similarity=0.149  Sum_probs=63.7

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcCc--chhhhcccCCCCCeEEEEcccCCC----------hHHH
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDL--DKAKTTLSKDNPSLQIVKADVTEG----------SAKL  128 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~d~----------~~~~  128 (296)
                      +|.||||+|.+|+.++..|+.+|.       +++++++++  +.+           +....|+.|.          ....
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~-----------~g~~~Dl~d~~~~~~~~~~i~~~~   70 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL-----------EGVVMELQDCAFPLLKGVVITTDP   70 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc-----------ceeeeehhhhcccccCCcEEecCh
Confidence            799999999999999999998662       488888876  322           2223333331          0234


Q ss_pred             HHHhcCCCCEEEEcCCCCCCCCCcchhHH--------HHHHHHHHHcC-CC-EEEEEc
Q 022495          129 SEAIGDDSEAVVCATGFQPGWDLFAPWKA--------INLVEACRKRG-VN-RFILIS  176 (296)
Q Consensus       129 ~~~~~~~~d~vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~-~~-~iV~~S  176 (296)
                      .+.+++ +|+|||+||....... .....        +.+.+.+++.. .. .+|.+|
T Consensus        71 ~~~~~~-aDiVVitAG~~~~~g~-tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          71 EEAFKD-VDVAILVGAFPRKPGM-ERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             HHHhCC-CCEEEEeCCCCCCcCC-cHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            677888 9999999997654321 11111        88888888873 33 455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.23  E-value=1.5e-05  Score=70.09  Aligned_cols=99  Identities=13%  Similarity=0.124  Sum_probs=64.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH-----------HHH
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA-----------KLS  129 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~-----------~~~  129 (296)
                      +|.|+|++|.+|+.++..|..+|.       +++++++++..         ........|+.| ..           ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~---------~~a~g~~~Dl~d-~~~~~~~~~~~~~~~~   70 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM---------KVLEGVVMELMD-CAFPLLDGVVPTHDPA   70 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc---------cccceeEeehhc-ccchhcCceeccCChH
Confidence            589999999999999999998653       58888886543         112223344444 22           335


Q ss_pred             HHhcCCCCEEEEcCCCCCCCCC-cch---hHH---HHHHHHHHHcC-C-CEEEEEcc
Q 022495          130 EAIGDDSEAVVCATGFQPGWDL-FAP---WKA---INLVEACRKRG-V-NRFILISS  177 (296)
Q Consensus       130 ~~~~~~~d~vv~~ag~~~~~~~-~~~---~~~---~~~l~~~~~~~-~-~~iV~~SS  177 (296)
                      +.+++ +|+||++||....... ...   .+.   +.+.+.+.+.. . ..+|.+|.
T Consensus        71 ~~~~~-aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        71 VAFTD-VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             HHhCC-CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            67788 9999999997654221 111   111   78888888873 3 35555553

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.22  E-value=2.1e-06  Score=65.65  Aligned_cols=77  Identities=22%  Similarity=0.350  Sum_probs=56.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcchhhhcccCC-CCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ++++++++|.|+ |+.|+.++..|.+.|.+ |+++.|+.+++.++.... ...+.++  ++.+    +.+.+.+ +|+||
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~~~----~~~~~~~-~DivI   80 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAI--PLED----LEEALQE-ADIVI   80 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EGGG----HCHHHHT-ESEEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcccccee--eHHH----HHHHHhh-CCeEE
Confidence            567999999996 99999999999999976 999999998877654311 2234443  3333    4455677 99999


Q ss_pred             EcCCCCC
Q 022495          141 CATGFQP  147 (296)
Q Consensus       141 ~~ag~~~  147 (296)
                      ++.+...
T Consensus        81 ~aT~~~~   87 (135)
T PF01488_consen   81 NATPSGM   87 (135)
T ss_dssp             E-SSTTS
T ss_pred             EecCCCC
Confidence            9987543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.20  E-value=1.8e-05  Score=60.98  Aligned_cols=101  Identities=21%  Similarity=0.214  Sum_probs=63.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccC-------CCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      +||.|+|++|.+|++++..|...+  .++++++++++.+.....+       ......+...|        .+.+++ +|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--------~~~~~~-aD   71 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD--------YEALKD-AD   71 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS--------GGGGTT-ES
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc--------cccccc-cc
Confidence            589999999999999999999987  5799999997654422110       11122333322        233667 99


Q ss_pred             EEEEcCCCCCCCCCcchh----HH---HHHHHHHHHcCCC-EEEEEc
Q 022495          138 AVVCATGFQPGWDLFAPW----KA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      +||.+||...........    +.   +.+.+.+.+.+.. .++.+|
T Consensus        72 ivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   72 IVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            999999975432221111    11   7777777777643 455544

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.16  E-value=1.3e-05  Score=70.40  Aligned_cols=150  Identities=11%  Similarity=0.072  Sum_probs=89.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcCcch--hhhcccC-CC------CCeEEEEcccCCChHHHHH
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDK--AKTTLSK-DN------PSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~-~~------~~~~~~~~D~~d~~~~~~~  130 (296)
                      ++|.|+|++|.+|..++..|+..|.       +++++++++..  +...... .+      .++.+.     .   ...+
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-----~---~~~~   74 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-----D---DPNV   74 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-----c---CcHH
Confidence            5899999999999999999998874       68888885432  2211110 00      112211     1   1245


Q ss_pred             HhcCCCCEEEEcCCCCCCCCCcchhHH--------HHHHHHHHHcC--CCEEEEEccce---eccCccCccCChhhhh-h
Q 022495          131 AIGDDSEAVVCATGFQPGWDLFAPWKA--------INLVEACRKRG--VNRFILISSIL---VNGAAMGQILNPAYIF-L  196 (296)
Q Consensus       131 ~~~~~~d~vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~--~~~iV~~SS~~---~~~~~~~~~~~~~~~~-~  196 (296)
                      .+++ +|+||.+||...... ......        +.+.+.+++.+  -..+|.+|.-.   .|-.       -...+ .
T Consensus        75 ~~~d-aDivvitaG~~~k~g-~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-------~k~sg~~  145 (322)
T cd01338          75 AFKD-ADWALLVGAKPRGPG-MERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA-------MKNAPDI  145 (322)
T ss_pred             HhCC-CCEEEEeCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH-------HHHcCCC
Confidence            5777 999999999755322 111111        77778877776  23555555311   0000       00111 2


Q ss_pred             hhhHHHHHHHHHHHHHH----HHhCCcEEEEecCcccCCCC
Q 022495          197 NVFGLTLIAKLQAEQYI----RKSGINYTIIRPGGLRNEPP  233 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~----~~~~~~~~~lrp~~i~g~~~  233 (296)
                      ++...|+.++...+++.    +..+++...++...|+|+..
T Consensus       146 p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         146 PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             ChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            33456677777766544    35789888899888888763

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.14  E-value=0.0013  Score=50.79  Aligned_cols=190  Identities=15%  Similarity=0.106  Sum_probs=105.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHH----HhcC-CCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSE----AIGD-DSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~----~~~~-~~d~  138 (296)
                      ..+|+|-||-|-+|+++++.+..+++-|.-++..+....       ..-.++..|-.-  .++.+.+    .+.+ ++|.
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDa   75 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDA   75 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-------cceEEecCCcchhHHHHHHHHHHHHhhcccccce
Confidence            458999999999999999999999998887776543211       111222222211  0233332    3333 7999


Q ss_pred             EEEcCCCCCCCCCcchhHH--------HHHHHHH-------HHcCCCEEEEE-ccceeccCccCccCChhhhhhhhhHHH
Q 022495          139 VVCATGFQPGWDLFAPWKA--------INLVEAC-------RKRGVNRFILI-SSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~--------~~~l~~~-------~~~~~~~iV~~-SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      ||+.||.............        +.+...+       ...+.+-++-+ +.-.+.+..            ...-.|
T Consensus        76 v~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gT------------PgMIGY  143 (236)
T KOG4022|consen   76 VFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGT------------PGMIGY  143 (236)
T ss_pred             EEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCC------------Ccccch
Confidence            9999986543332211111        2222111       11122233333 322222222            224569


Q ss_pred             HHHHHHHHHHHHH-----hCCc----EEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC--CCCCC
Q 022495          203 LIAKLQAEQYIRK-----SGIN----YTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP--ESSYK  271 (296)
Q Consensus       203 ~~sK~~~e~~~~~-----~~~~----~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~--~~~~~  271 (296)
                      +..|.++.++.+.     .|++    ...|-|-...+++.+..+    .+.-+..|.....+++...+.....  ...+.
T Consensus       144 GMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwM----P~ADfssWTPL~fi~e~flkWtt~~~RPssGs  219 (236)
T KOG4022|consen  144 GMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWM----PNADFSSWTPLSFISEHFLKWTTETSRPSSGS  219 (236)
T ss_pred             hHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccC----CCCcccCcccHHHHHHHHHHHhccCCCCCCCc
Confidence            9999999998753     4554    455666666666533332    1222356888999988888777532  23455


Q ss_pred             eEEEEeC
Q 022495          272 VVEIISR  278 (296)
Q Consensus       272 ~~~i~~~  278 (296)
                      ...+...
T Consensus       220 Llqi~Tt  226 (236)
T KOG4022|consen  220 LLQITTT  226 (236)
T ss_pred             eEEEEec
Confidence            6666553

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.13  E-value=3.7e-05  Score=71.01  Aligned_cols=77  Identities=23%  Similarity=0.278  Sum_probs=56.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-hhhhccc-CCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ++++|+|+|+|+++ +|..+++.|+++|++|++.+++.. ...+... ....++.++.+|..| .     ...+ +|+||
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~-----~~~~-~d~vv   73 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-E-----FLEG-VDLVV   73 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-h-----Hhhc-CCEEE
Confidence            35689999999866 999999999999999999998752 2211110 012357788888765 2     2456 99999


Q ss_pred             EcCCCCC
Q 022495          141 CATGFQP  147 (296)
Q Consensus       141 ~~ag~~~  147 (296)
                      +++|...
T Consensus        74 ~~~g~~~   80 (450)
T PRK14106         74 VSPGVPL   80 (450)
T ss_pred             ECCCCCC
Confidence            9998754

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.01  E-value=2.6e-05  Score=62.71  Aligned_cols=75  Identities=16%  Similarity=0.313  Sum_probs=47.1

Q ss_pred             CCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC-ChHH
Q 022495           65 KQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE-GSAK  127 (296)
Q Consensus        65 ~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~  127 (296)
                      ++|+||||+|                ||-.|.+||++++.+|++|+++.... ..+     ...++..+...-.+ ..+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~-----~p~~~~~i~v~sa~em~~~   75 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLP-----PPPGVKVIRVESAEEMLEA   75 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S---------TTEEEEE-SSHHHHHHH
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-ccc-----ccccceEEEecchhhhhhh
Confidence            4677777754                79999999999999999999988773 211     12467777654332 1244


Q ss_pred             HHHHhcCCCCEEEEcCCCC
Q 022495          128 LSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus       128 ~~~~~~~~~d~vv~~ag~~  146 (296)
                      +.+.+.. .|++||+|++.
T Consensus        76 ~~~~~~~-~Di~I~aAAVs   93 (185)
T PF04127_consen   76 VKELLPS-ADIIIMAAAVS   93 (185)
T ss_dssp             HHHHGGG-GSEEEE-SB--
T ss_pred             hccccCc-ceeEEEecchh
Confidence            5555666 89999999863

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=98.00  E-value=0.00014  Score=53.88  Aligned_cols=92  Identities=25%  Similarity=0.320  Sum_probs=67.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCCCCC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATGFQP  147 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag~~~  147 (296)
                      |+|.|. |.+|..+++.|.+.+.+|++++++++.......   .++.++.+|.+| .+.++++ +.+ ++.+|.+..   
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~---~~~~~i~gd~~~-~~~l~~a~i~~-a~~vv~~~~---   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE---EGVEVIYGDATD-PEVLERAGIEK-ADAVVILTD---   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH---TTSEEEES-TTS-HHHHHHTTGGC-ESEEEEESS---
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh---cccccccccchh-hhHHhhcCccc-cCEEEEccC---
Confidence            578886 899999999999977799999999987766543   458999999999 8888875 455 999998765   


Q ss_pred             CCCCcchhHHHHHHHHHHHc-CCCEEEE
Q 022495          148 GWDLFAPWKAINLVEACRKR-GVNRFIL  174 (296)
Q Consensus       148 ~~~~~~~~~~~~~l~~~~~~-~~~~iV~  174 (296)
                           .......++..+++. +..+++.
T Consensus        72 -----~d~~n~~~~~~~r~~~~~~~ii~   94 (116)
T PF02254_consen   72 -----DDEENLLIALLARELNPDIRIIA   94 (116)
T ss_dssp             -----SHHHHHHHHHHHHHHTTTSEEEE
T ss_pred             -----CHHHHHHHHHHHHHHCCCCeEEE
Confidence                 222225566667764 3346554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=98.00  E-value=3.2e-05  Score=76.92  Aligned_cols=77  Identities=22%  Similarity=0.284  Sum_probs=62.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-Ce-------------EEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHH
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FA-------------VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~  130 (296)
                      ++++|+|.|+ |++|+.+++.|.+.. .+             |++.+++++.++++.. ..++++.+..|+.| .+.+.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~-~~~~~~~v~lDv~D-~e~L~~  644 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVE-GIENAEAVQLDVSD-SESLLK  644 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHH-hcCCCceEEeecCC-HHHHHH
Confidence            4789999996 999999999998753 33             7777888776665432 22467889999999 899999


Q ss_pred             HhcCCCCEEEEcCCC
Q 022495          131 AIGDDSEAVVCATGF  145 (296)
Q Consensus       131 ~~~~~~d~vv~~ag~  145 (296)
                      ++++ +|+||++...
T Consensus       645 ~v~~-~DaVIsalP~  658 (1042)
T PLN02819        645 YVSQ-VDVVISLLPA  658 (1042)
T ss_pred             hhcC-CCEEEECCCc
Confidence            9999 9999999864

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=98.00  E-value=9.5e-05  Score=65.39  Aligned_cols=107  Identities=22%  Similarity=0.306  Sum_probs=71.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcch---------------------hh---hcccC--CCCCeE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---------------------AK---TTLSK--DNPSLQ  115 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~---------------------~~---~~~~~--~~~~~~  115 (296)
                      .+++++|+|+|+ |++|+++++.|+..|. ++++++++.-.                     ..   +.+..  ...+++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            467889999996 8899999999999996 78888887411                     00   00111  223456


Q ss_pred             EEEcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceecc
Q 022495          116 IVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNG  182 (296)
Q Consensus       116 ~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~  182 (296)
                      .+..|++.  +.+.+++++ +|+||.+...        ......+-+.+.+.++ .+|+.+..+.+|
T Consensus       100 ~~~~~~~~--~~~~~~~~~-~DlVid~~D~--------~~~r~~in~~~~~~~i-p~i~~~~~g~~G  154 (338)
T PRK12475        100 PVVTDVTV--EELEELVKE-VDLIIDATDN--------FDTRLLINDLSQKYNI-PWIYGGCVGSYG  154 (338)
T ss_pred             EEeccCCH--HHHHHHhcC-CCEEEEcCCC--------HHHHHHHHHHHHHcCC-CEEEEEecccEE
Confidence            66677754  567888888 9999988631        1111345567778776 677776655433

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.00  E-value=5.9e-05  Score=69.69  Aligned_cols=73  Identities=22%  Similarity=0.299  Sum_probs=61.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      |+|+|+|+ |.+|+++++.|.++|++|++++++++.......  ..++.++.+|.++ .+.+.++ +++ +|.||.+.+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~--~~~~~~~~gd~~~-~~~l~~~~~~~-a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD--RLDVRTVVGNGSS-PDVLREAGAED-ADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh--hcCEEEEEeCCCC-HHHHHHcCCCc-CCEEEEecC
Confidence            57999997 999999999999999999999999887665431  2468899999999 7888887 677 999998764

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.97  E-value=0.00013  Score=64.54  Aligned_cols=107  Identities=22%  Similarity=0.306  Sum_probs=73.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchh---------------------h---hcccC--CCCCeE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA---------------------K---TTLSK--DNPSLQ  115 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~---------------------~---~~~~~--~~~~~~  115 (296)
                      .++..+|+|.|+ |++|+.+++.|+..|. ++++++++.-..                     .   +.+..  ..-+++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            467789999997 9999999999999997 788888863110                     0   01111  223455


Q ss_pred             EEEcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceecc
Q 022495          116 IVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNG  182 (296)
Q Consensus       116 ~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~  182 (296)
                      .+..+++.  +.+.+.+++ .|+||.+...        ......+.++|.+.++ .+|+.++.+.||
T Consensus       100 ~~~~~~~~--~~~~~~~~~-~DlVid~~Dn--------~~~r~~ln~~~~~~~i-P~i~~~~~g~~G  154 (339)
T PRK07688        100 AIVQDVTA--EELEELVTG-VDLIIDATDN--------FETRFIVNDAAQKYGI-PWIYGACVGSYG  154 (339)
T ss_pred             EEeccCCH--HHHHHHHcC-CCEEEEcCCC--------HHHHHHHHHHHHHhCC-CEEEEeeeeeee
Confidence            66667654  567778888 9999988531        1112556677888875 688877766544

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.95  E-value=3.7e-05  Score=68.96  Aligned_cols=102  Identities=19%  Similarity=0.313  Sum_probs=66.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHH-HhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSE-AIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~~~d~vv~~  142 (296)
                      +.++|.|.||||++|..+++.|.++ +.+|+.+.++...-+....   ........|+.+ .+.+.. .+++ +|+||.+
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~---~~~~l~~~~~~~-~~~~~~~~~~~-~DvVf~A  111 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGS---VFPHLITQDLPN-LVAVKDADFSD-VDAVFCC  111 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchh---hCccccCccccc-eecCCHHHhcC-CCEEEEc
Confidence            3579999999999999999999998 6789998876433221110   111222244443 222222 2577 9999998


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceecc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNG  182 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~  182 (296)
                      .+-.         ...++++.+ +.| .++|-.|+..-+.
T Consensus       112 lp~~---------~s~~i~~~~-~~g-~~VIDlSs~fRl~  140 (381)
T PLN02968        112 LPHG---------TTQEIIKAL-PKD-LKIVDLSADFRLR  140 (381)
T ss_pred             CCHH---------HHHHHHHHH-hCC-CEEEEcCchhccC
Confidence            7531         226677776 355 4899999887543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.94  E-value=2.1e-05  Score=67.33  Aligned_cols=76  Identities=21%  Similarity=0.263  Sum_probs=61.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      ..++|-||+||.|..++++|..+|.+-.+..|+..++..+....+++...+  ++.+ ++.+.+...+ .++|+||+|..
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~--p~~~-p~~~~~~~~~-~~VVlncvGPy   82 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVF--PLGV-PAALEAMASR-TQVVLNCVGPY   82 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcccccc--CCCC-HHHHHHHHhc-ceEEEeccccc
Confidence            468999999999999999999999988888999988876543333444444  4444 6788888888 99999999964

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.92  E-value=6e-05  Score=66.69  Aligned_cols=93  Identities=17%  Similarity=0.187  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCe---EEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFA---VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +++|+|.||||++|+.+++.|.++|+.   ++.+.+..+..+.+.   ..+......|+.+ .     .+.+ +|+||.+
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~---~~g~~i~v~d~~~-~-----~~~~-vDvVf~A   70 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS---FKGKELKVEDLTT-F-----DFSG-VDIALFS   70 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee---eCCceeEEeeCCH-H-----HHcC-CCEEEEC
Confidence            468999999999999999999998764   477776654322221   1123444445543 2     2357 9999998


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +|..         ..+.+++...+.|+ .+|=.|+.
T Consensus        71 ~g~g---------~s~~~~~~~~~~G~-~VIDlS~~   96 (334)
T PRK14874         71 AGGS---------VSKKYAPKAAAAGA-VVIDNSSA   96 (334)
T ss_pred             CChH---------HHHHHHHHHHhCCC-EEEECCch
Confidence            8632         11456666666775 56656664

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.90  E-value=4.9e-05  Score=65.65  Aligned_cols=73  Identities=21%  Similarity=0.320  Sum_probs=51.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccC---CCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      ++++++++|.|+ |+.|++++..|.+.|. +|++++|+.++.+.+...   ......+..      .+.+.+.+.+ +|+
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~------~~~~~~~~~~-aDi  195 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA------GSDLAAALAA-ADG  195 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe------ccchHhhhCC-CCE
Confidence            456789999996 9999999999999996 799999998877654321   111222211      1224445677 999


Q ss_pred             EEEcC
Q 022495          139 VVCAT  143 (296)
Q Consensus       139 vv~~a  143 (296)
                      ||++.
T Consensus       196 VInaT  200 (284)
T PRK12549        196 LVHAT  200 (284)
T ss_pred             EEECC
Confidence            99984

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.87  E-value=7.5e-05  Score=58.34  Aligned_cols=76  Identities=21%  Similarity=0.287  Sum_probs=52.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +++++++|+|+ |.+|..+++.|.+.| .+|++.+|++++..+.....  +...+..+..+    ..+.+++ +|+||++
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~-~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF--GELGIAIAYLD----LEELLAE-ADLIINT   88 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH--hhcccceeecc----hhhcccc-CCEEEeC
Confidence            45789999997 999999999999996 78999999987665433211  11112233444    2333677 9999999


Q ss_pred             CCCCC
Q 022495          143 TGFQP  147 (296)
Q Consensus       143 ag~~~  147 (296)
                      .+...
T Consensus        89 ~~~~~   93 (155)
T cd01065          89 TPVGM   93 (155)
T ss_pred             cCCCC
Confidence            87543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.83  E-value=6.8e-05  Score=64.65  Aligned_cols=75  Identities=24%  Similarity=0.351  Sum_probs=52.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++++++|+|+ |++|++++..|.+.| .+|+++.|+.++..++........ .+..++ +    ..+.+.+ .|+||+
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~~~-~----~~~~~~~-~DivIn  191 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAELDL-E----LQEELAD-FDLIIN  191 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceeecc-c----chhcccc-CCEEEE
Confidence            567899999996 999999999999999 789999999887665432111110 011111 1    2344566 999999


Q ss_pred             cCCC
Q 022495          142 ATGF  145 (296)
Q Consensus       142 ~ag~  145 (296)
                      +...
T Consensus       192 aTp~  195 (278)
T PRK00258        192 ATSA  195 (278)
T ss_pred             CCcC
Confidence            8754

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.83  E-value=0.00026  Score=65.41  Aligned_cols=103  Identities=21%  Similarity=0.331  Sum_probs=73.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~  142 (296)
                      ...++|+|.|+ |.+|+.+++.|.+.|++|++++++++....... ...++.++.+|.+| .+.+.++ +.+ +|.||.+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~-~~~~~~~i~gd~~~-~~~L~~~~~~~-a~~vi~~  304 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE-ELPNTLVLHGDGTD-QELLEEEGIDE-ADAFIAL  304 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH-HCCCCeEEECCCCC-HHHHHhcCCcc-CCEEEEC
Confidence            45689999997 999999999999999999999999887655432 22467899999999 7777654 455 9999876


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .+-.       ..+ ..+...+++.+..++|.....
T Consensus       305 ~~~~-------~~n-~~~~~~~~~~~~~~ii~~~~~  332 (453)
T PRK09496        305 TNDD-------EAN-ILSSLLAKRLGAKKVIALVNR  332 (453)
T ss_pred             CCCc-------HHH-HHHHHHHHHhCCCeEEEEECC
Confidence            5421       111 223344566676676665443

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.82  E-value=0.00061  Score=51.98  Aligned_cols=103  Identities=18%  Similarity=0.316  Sum_probs=68.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhc----------------------cc--CCCCCeEEEEcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LS--KDNPSLQIVKAD  120 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------------------~~--~~~~~~~~~~~D  120 (296)
                      .++|+|.|+ |.+|+.+++.|...|. +++++|.+.-....+                      +.  ....+++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            468999995 9999999999999996 688887764221110                      00  023456667777


Q ss_pred             cCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceec
Q 022495          121 VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVN  181 (296)
Q Consensus       121 ~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~  181 (296)
                      +.  .+.+.+.+++ +|+||.|...        ......+.+.+++.++ .+|+.+..+.+
T Consensus        81 ~~--~~~~~~~~~~-~d~vi~~~d~--------~~~~~~l~~~~~~~~~-p~i~~~~~g~~  129 (135)
T PF00899_consen   81 ID--EENIEELLKD-YDIVIDCVDS--------LAARLLLNEICREYGI-PFIDAGVNGFY  129 (135)
T ss_dssp             CS--HHHHHHHHHT-SSEEEEESSS--------HHHHHHHHHHHHHTT--EEEEEEEETTE
T ss_pred             cc--cccccccccC-CCEEEEecCC--------HHHHHHHHHHHHHcCC-CEEEEEeecCE
Confidence            73  4667888888 9999988631        1122566677888875 78877765433

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.80  E-value=0.0001  Score=64.46  Aligned_cols=101  Identities=19%  Similarity=0.205  Sum_probs=64.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccC-------CCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      ++|.|+|+ |++|+.++..|+..|  .+|++++|++++...+...       .........   .+ .+    .+.+ +|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~-~~----~l~~-aD   70 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GD-YS----DCKD-AD   70 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CC-HH----HhCC-CC
Confidence            47999996 999999999999999  5899999988765533221       011222221   22 22    3567 99


Q ss_pred             EEEEcCCCCCCCCCcchh----HH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          138 AVVCATGFQPGWDLFAPW----KA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      +||+++|...........    +.   +.+.+.+++.+.+ .+|.+|.
T Consensus        71 IVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          71 IVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            999999975433211111    11   7777887777633 5555553

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.77  E-value=0.00023  Score=62.34  Aligned_cols=106  Identities=12%  Similarity=0.169  Sum_probs=62.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCc--chhhhcccCCCC-----CeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDL--DKAKTTLSKDNP-----SLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      |+|.|+|++|.+|..++..|+..|.  +|++++|++  +++.........     ... .....++  + . +.+++ +|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~--d-~-~~l~~-aD   74 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISS--D-L-SDVAG-SD   74 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECC--C-H-HHhCC-CC
Confidence            5899999999999999999999986  499999954  332211110000     000 0111121  1 2 24778 99


Q ss_pred             EEEEcCCCCCCCCCc-chh---H---HHHHHHHHHHcCC-CEEEEEccc
Q 022495          138 AVVCATGFQPGWDLF-APW---K---AINLVEACRKRGV-NRFILISSI  178 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~-~~~---~---~~~~l~~~~~~~~-~~iV~~SS~  178 (296)
                      +||.++|........ ...   +   .+.+++.+.+... ..+|.+++.
T Consensus        75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            999999976543211 111   1   1666666666643 366666653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.77  E-value=0.00041  Score=56.82  Aligned_cols=106  Identities=19%  Similarity=0.210  Sum_probs=68.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcch---h----------------h---hcccCCCCC--eEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---A----------------K---TTLSKDNPS--LQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~---~----------------~---~~~~~~~~~--~~~~  117 (296)
                      .+++++|+|.|+ |++|+++++.|+..|. ++++++++.-.   +                .   +.+...++.  ++.+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            456789999995 9999999999999996 78888877311   1                0   011111233  3344


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceec
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVN  181 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~  181 (296)
                      ..++.  .+.+.+.+++ .|+||.+....        .....+-+.+++.++ .+|+.+..+.+
T Consensus        97 ~~~i~--~~~~~~~~~~-~D~Vi~~~d~~--------~~r~~l~~~~~~~~i-p~i~~~~~g~~  148 (202)
T TIGR02356        97 KERVT--AENLELLINN-VDLVLDCTDNF--------ATRYLINDACVALGT-PLISAAVVGFG  148 (202)
T ss_pred             hhcCC--HHHHHHHHhC-CCEEEECCCCH--------HHHHHHHHHHHHcCC-CEEEEEeccCe
Confidence            44443  3567778888 99999886321        111456677788875 67777655433

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK04148 hypothetical protein; Provisional

Probab=97.75  E-value=0.00043  Score=52.27  Aligned_cols=94  Identities=18%  Similarity=0.150  Sum_probs=69.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ++++++++|. | .|.+++..|.+.|++|++++.++........   ..++++.+|+.++..++   .++ +|.++.+= 
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~---~~~~~v~dDlf~p~~~~---y~~-a~liysir-   85 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK---LGLNAFVDDLFNPNLEI---YKN-AKLIYSIR-   85 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH---hCCeEEECcCCCCCHHH---Hhc-CCEEEEeC-
Confidence            4578999995 6 8999999999999999999999986554432   46899999999943333   456 88888652 


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEE
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILI  175 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~  175 (296)
                        +..     .....+++.+++.++.-+|..
T Consensus        86 --pp~-----el~~~~~~la~~~~~~~~i~~  109 (134)
T PRK04148         86 --PPR-----DLQPFILELAKKINVPLIIKP  109 (134)
T ss_pred             --CCH-----HHHHHHHHHHHHcCCCEEEEc
Confidence              111     112678899999998666654

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.75  E-value=0.00013  Score=64.79  Aligned_cols=101  Identities=18%  Similarity=0.181  Sum_probs=62.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEE-EcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIV-KADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +++|+|+||||++|+.+++.|.+. +.+++++.++.+..+.... ..+.+..+ ..++.+ .+..  .+.+ +|+||.|.
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~-~~~~~~~~~~~~~~~-~~~~--~~~~-vD~Vf~al   76 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSD-VHPHLRGLVDLVLEP-LDPE--ILAG-ADVVFLAL   76 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHH-hCcccccccCceeec-CCHH--HhcC-CCEEEECC
Confidence            479999999999999999999986 6788777664322111110 11112211 223433 3322  4567 99999887


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceec
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVN  181 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~  181 (296)
                      +.         .....+++.+.+.|+ ++|=.|+..-+
T Consensus        77 P~---------~~~~~~v~~a~~aG~-~VID~S~~fR~  104 (343)
T PRK00436         77 PH---------GVSMDLAPQLLEAGV-KVIDLSADFRL  104 (343)
T ss_pred             Cc---------HHHHHHHHHHHhCCC-EEEECCcccCC
Confidence            53         112566677777774 78888876543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.71  E-value=0.00025  Score=62.20  Aligned_cols=102  Identities=17%  Similarity=0.182  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcccC------CCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSK------DNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      .++||.|+|+ |.+|..++..|+..|.  ++++++++.+.+......      ...++....   .+     .+.+++ +
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~-----~~~~~~-a   74 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD-----YSDCKD-A   74 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC-----HHHhCC-C
Confidence            3679999998 9999999999999885  799999987654422110      001222221   12     233677 9


Q ss_pred             CEEEEcCCCCCCCCCcchh----HH---HHHHHHHHHcCCC-EEEEEc
Q 022495          137 EAVVCATGFQPGWDLFAPW----KA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      |+||.+||...........    +.   +.+++.+++.+.+ .+|.+|
T Consensus        75 divIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         75 DLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             CEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9999999975542211111    11   7777777776643 455554

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.71  E-value=0.00035  Score=60.92  Aligned_cols=104  Identities=16%  Similarity=0.134  Sum_probs=63.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccC-CC--CCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK-DN--PSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      |||.|+|++|.+|++++..|+.+|  .++++++++  ++...... .+  ....+....  . .+++.+.+++ +|+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~-~~~~y~~~~d-aDivvi   74 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--G-PEELKKALKG-ADVVVI   74 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--C-CCchHHhcCC-CCEEEE
Confidence            589999999999999999999888  478888887  22211100 11  111222110  1 1235566888 999999


Q ss_pred             cCCCCCCCCCcchhHH--------HHHHHHHHHcCCC-EEEEEcc
Q 022495          142 ATGFQPGWDLFAPWKA--------INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~--------~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      +||....... .....        +.+.+..++.+.. .+|.+|.
T Consensus        75 taG~~~k~g~-tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          75 PAGVPRKPGM-TRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             eCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            9997643321 11111        7777777777633 5555554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.71  E-value=0.00034  Score=61.42  Aligned_cols=107  Identities=13%  Similarity=0.100  Sum_probs=61.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcCcc--hhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLD--KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      .||.|+|++|++|+.++..|+..|.       +++++++++.  ++................+..- .....+.+++ +|
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~~~~~~~~d-aD   81 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-TTDPEEAFKD-VD   81 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-ecChHHHhCC-CC
Confidence            4899999999999999999998873       7888888642  2221110000000000001100 0112455777 99


Q ss_pred             EEEEcCCCCCCCCCcchhHH--------HHHHHHHHHcCC-C-EEEEEc
Q 022495          138 AVVCATGFQPGWDLFAPWKA--------INLVEACRKRGV-N-RFILIS  176 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~~-~-~iV~~S  176 (296)
                      +||.+||...... +.....        +.+.+.+.+... . .+|.+|
T Consensus        82 vVVitAG~~~k~g-~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        82 AALLVGAFPRKPG-MERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             EEEEeCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            9999999764332 122111        778888877754 4 455454

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.70  E-value=0.00067  Score=55.67  Aligned_cols=88  Identities=17%  Similarity=0.233  Sum_probs=63.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++++|+|.|| |.+|..-++.|++.|++|++++.+... ..++.  ...++.++..+... .+     +.+ ++.||-
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~--~~~~i~~~~~~~~~-~d-----l~~-~~lVi~   75 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA--EQGGITWLARCFDA-DI-----LEG-AFLVIA   75 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH--HcCCEEEEeCCCCH-HH-----hCC-cEEEEE
Confidence            567899999996 999999999999999999998876542 22222  22478888888764 22     466 888886


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcC
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRG  168 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~  168 (296)
                      +.+.        ......+...|++.+
T Consensus        76 at~d--------~~ln~~i~~~a~~~~   94 (205)
T TIGR01470        76 ATDD--------EELNRRVAHAARARG   94 (205)
T ss_pred             CCCC--------HHHHHHHHHHHHHcC
Confidence            6542        112256777777766

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.68  E-value=0.00095  Score=61.83  Aligned_cols=217  Identities=21%  Similarity=0.203  Sum_probs=117.7

Q ss_pred             cCCCCeEEEEcCC-chHHHHHHHHHHHCCCeEEEEEcCcchhhh-----ccc---CCCCCeEEEEcccCCC--hHHHHHH
Q 022495           63 SVKQKKIFVAGAT-GSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLS---KDNPSLQIVKADVTEG--SAKLSEA  131 (296)
Q Consensus        63 ~~~~~~ilVtGa~-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~---~~~~~~~~~~~D~~d~--~~~~~~~  131 (296)
                      ...++.++||||+ |.||..++..|++.|.+|++..-+.++...     +..   .....+-++..+....  .+.+-+.
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            4467899999986 789999999999999999998766543221     111   1233455555665440  4444443


Q ss_pred             hcC-----------------CCCEEEEcCCCCCCCCCcc---h---------hHHHHHHHHHHHcC----C---CEEEEE
Q 022495          132 IGD-----------------DSEAVVCATGFQPGWDLFA---P---------WKAINLVEACRKRG----V---NRFILI  175 (296)
Q Consensus       132 ~~~-----------------~~d~vv~~ag~~~~~~~~~---~---------~~~~~~l~~~~~~~----~---~~iV~~  175 (296)
                      +..                 .+|.+|-+|.+.-..+...   .         +++++++-..++.+    +   -|+|+.
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLP  552 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLP  552 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEec
Confidence            321                 3678887776543322111   0         11144444444443    2   167777


Q ss_pred             ccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh----C----CcEEEEecCcccCC--CCCCceeecccCcc
Q 022495          176 SSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS----G----INYTIIRPGGLRNE--PPTGNIIMETEDTL  245 (296)
Q Consensus       176 SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~----~----~~~~~lrp~~i~g~--~~~~~~~~~~~~~~  245 (296)
                      .|-.-     +        -...-+.|+.+|.+.+.++.+.    +    +.+.--+.||+.|.  +..++++....+..
T Consensus       553 gSPNr-----G--------~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~  619 (866)
T COG4982         553 GSPNR-----G--------MFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDIIVAAIEKA  619 (866)
T ss_pred             CCCCC-----C--------ccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchhHHHHHHh
Confidence            66431     1        1222467999999999877532    1    12223344555443  22344444444433


Q ss_pred             ccCCcCHHHHHHHHHHHhcCC-----CCCCCeEEEEeCCCCCCCCHHHHHHH
Q 022495          246 YEGTISRDQVAEVAVEALLHP-----ESSYKVVEIISRVDAPKRSYEDLFGS  292 (296)
Q Consensus       246 ~~~~i~~~Dva~~i~~~l~~~-----~~~~~~~~i~~~~~~~~~~~~el~~~  292 (296)
                      .-..-+.+++|..++.++...     ......+++.+.-..-+....+++..
T Consensus       620 GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~~~~~a~~A~~  671 (866)
T COG4982         620 GVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEVPLLKAELAAL  671 (866)
T ss_pred             CceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccchhhHHHHHHH
Confidence            333455667766655554321     12334566666433344555555543

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.66  E-value=0.00037  Score=60.30  Aligned_cols=102  Identities=19%  Similarity=0.171  Sum_probs=62.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCCCCCe------EEEEcccCCChHHHHHHhcCCCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSL------QIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +||.|+|+ |+||+.++..|+.++  .+++++++.++.............      ..+.+| .|     .+.+++ .|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~-----y~~~~~-aDi   72 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD-----YEDLKG-ADI   72 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC-----hhhhcC-CCE
Confidence            48999999 999999999998876  489999998554432111101111      122222 11     344777 999


Q ss_pred             EEEcCCCCCCCCCcchhHH-------HHHHHHHHHcCCCEEEEEc
Q 022495          139 VVCATGFQPGWDLFAPWKA-------INLVEACRKRGVNRFILIS  176 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~-------~~~l~~~~~~~~~~iV~~S  176 (296)
                      ||-+||.............       +.+.+...+.+.+-++++-
T Consensus        73 VvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVv  117 (313)
T COG0039          73 VVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVV  117 (313)
T ss_pred             EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            9999997665432211111       6677777776644444443

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.65  E-value=0.00024  Score=61.25  Aligned_cols=78  Identities=21%  Similarity=0.299  Sum_probs=51.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCC--CeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNP--SLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      +.++++++|.|+ |+.|++++-.|++.|. +|++..|+.++.+++......  ....+.  ..+ ...+.+.+.. +|+|
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~-~~~~~~~~~~-~div  198 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVD-ARGIEDVIAA-ADGV  198 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecC-HhHHHHHHhh-cCEE
Confidence            356789999996 9999999999999995 789999998877665421110  111111  112 2223334456 9999


Q ss_pred             EEcCCC
Q 022495          140 VCATGF  145 (296)
Q Consensus       140 v~~ag~  145 (296)
                      ||+...
T Consensus       199 INaTp~  204 (283)
T PRK14027        199 VNATPM  204 (283)
T ss_pred             EEcCCC
Confidence            998643

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.65  E-value=0.00014  Score=58.33  Aligned_cols=98  Identities=13%  Similarity=0.162  Sum_probs=63.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+++|.|.| .|.||+.+++.|..-|.+|++.+|..........   ..+     .    ..++.+++.+ +|+|+.
T Consensus        32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~---~~~-----~----~~~l~ell~~-aDiv~~   97 (178)
T PF02826_consen   32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE---FGV-----E----YVSLDELLAQ-ADIVSL   97 (178)
T ss_dssp             S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH---TTE-----E----ESSHHHHHHH--SEEEE
T ss_pred             cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc---ccc-----e----eeehhhhcch-hhhhhh
Confidence            456799999998 5999999999999999999999999875431110   111     1    2346667777 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +............   ...++.|++..  .||+++-.
T Consensus        98 ~~plt~~T~~li~---~~~l~~mk~ga--~lvN~aRG  129 (178)
T PF02826_consen   98 HLPLTPETRGLIN---AEFLAKMKPGA--VLVNVARG  129 (178)
T ss_dssp             -SSSSTTTTTSBS---HHHHHTSTTTE--EEEESSSG
T ss_pred             hhccccccceeee---eeeeeccccce--EEEeccch
Confidence            7765444333222   45666666432  57776653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK05442 malate dehydrogenase; Provisional

Probab=97.65  E-value=0.00073  Score=59.42  Aligned_cols=102  Identities=11%  Similarity=0.122  Sum_probs=62.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcCcc--hhhhcccC-CC------CCeEEEEcccCCChHHHH
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLD--KAKTTLSK-DN------PSLQIVKADVTEGSAKLS  129 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~-~~------~~~~~~~~D~~d~~~~~~  129 (296)
                      .++|.|+|++|.+|+.++..|+..|.       +++++++++.  ++...... .+      .++.+..        ...
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--------~~y   75 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD--------DPN   75 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec--------ChH
Confidence            46899999999999999999998763       6888888543  22211100 00      1122111        123


Q ss_pred             HHhcCCCCEEEEcCCCCCCCCCcchhHH--------HHHHHHHHHcC--CCEEEEEcc
Q 022495          130 EAIGDDSEAVVCATGFQPGWDLFAPWKA--------INLVEACRKRG--VNRFILISS  177 (296)
Q Consensus       130 ~~~~~~~d~vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~--~~~iV~~SS  177 (296)
                      +.+++ .|+||.+||...... +.....        +.+.+.+.+..  -..+|.+|.
T Consensus        76 ~~~~d-aDiVVitaG~~~k~g-~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         76 VAFKD-ADVALLVGARPRGPG-MERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             HHhCC-CCEEEEeCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            45777 999999999754322 111111        77888887743  345666654

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.64  E-value=0.0013  Score=49.25  Aligned_cols=95  Identities=18%  Similarity=0.245  Sum_probs=55.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCC-CeEEEE-EcCcch---hhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKG-FAVKAG-VRDLDK---AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~-~r~~~~---~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ||.|+||||++|+.+++.|.+.- .+++.+ .++.+.   .....+.....-.....| .+ .+.    +.+ +|+||.|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~-~~~----~~~-~Dvvf~a   73 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-AD-PEE----LSD-VDVVFLA   73 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TS-GHH----HTT-ESEEEE-
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cc-hhH----hhc-CCEEEec
Confidence            68999999999999999999853 455544 454411   222221000111121222 33 232    366 9999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      .+-         .....+.+.+.+.|+ ++|=.|+..
T Consensus        74 ~~~---------~~~~~~~~~~~~~g~-~ViD~s~~~  100 (121)
T PF01118_consen   74 LPH---------GASKELAPKLLKAGI-KVIDLSGDF  100 (121)
T ss_dssp             SCH---------HHHHHHHHHHHHTTS-EEEESSSTT
T ss_pred             Cch---------hHHHHHHHHHhhCCc-EEEeCCHHH
Confidence            741         222667777788886 666666653

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.63  E-value=0.00023  Score=61.12  Aligned_cols=73  Identities=18%  Similarity=0.273  Sum_probs=50.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCC--CCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++++++|+|+ |++|+.++..|++.|++|++.+|++++..++.....  ..+..+  +..+      ..+.+ +|+||+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~------~~~~~-~DivIn  184 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE------LPLHR-VDLIIN  184 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh------hcccC-ccEEEE
Confidence            45789999997 899999999999999999999999877654432111  111211  1111      12345 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +.+..
T Consensus       185 atp~g  189 (270)
T TIGR00507       185 ATSAG  189 (270)
T ss_pred             CCCCC
Confidence            98753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.62  E-value=0.00081  Score=53.11  Aligned_cols=66  Identities=21%  Similarity=0.297  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      |++|.++|- |-+|+.+++.|+++|++|++.+|++++.+++..   .+++.        .++..++.++ +|+||-|..
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~g~~~--------~~s~~e~~~~-~dvvi~~v~   66 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE---AGAEV--------ADSPAEAAEQ-ADVVILCVP   66 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH---TTEEE--------ESSHHHHHHH-BSEEEE-SS
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH---hhhhh--------hhhhhhHhhc-ccceEeecc
Confidence            478999995 999999999999999999999999988876653   22221        2335556666 899998863

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.61  E-value=0.00072  Score=59.05  Aligned_cols=106  Identities=18%  Similarity=0.170  Sum_probs=62.7

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhc-ccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTT-LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ||.|+|++|.+|++++..|+.+|.  +++++++++.....+ +........+....  + .+++.+.+++ .|+||.+||
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~-~~~~~~~~~d-aDivvitaG   76 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--G-EEGLENALKG-ADVVVIPAG   76 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--C-CCchHHHcCC-CCEEEEeCC
Confidence            589999999999999999998874  688888876211111 11001111121101  1 1224567888 999999999


Q ss_pred             CCCCCCCcch----hHH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          145 FQPGWDLFAP----WKA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       145 ~~~~~~~~~~----~~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      ..........    .+.   +.+.+...+.+.+ .+|.+|.
T Consensus        77 ~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        77 VPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            7543221111    111   7777777777643 4555554

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.60  E-value=0.001  Score=55.64  Aligned_cols=104  Identities=20%  Similarity=0.222  Sum_probs=67.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhh----------------------cccCCC--CCeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDN--PSLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----------------------~~~~~~--~~~~~~  117 (296)
                      .+++++|+|.|+ |++|+++++.|+..|. +++++|.+.-....                      .+...+  .+++.+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            456789999995 9999999999999995 67776655311110                      000112  245555


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ..+++  .+.+.+.+++ +|+||.|....        .....+.+.+.+.++ .+|+.+..+
T Consensus        97 ~~~i~--~~~~~~~~~~-~DvVi~~~d~~--------~~r~~l~~~~~~~~i-p~i~~g~~g  146 (228)
T cd00757          97 NERLD--AENAEELIAG-YDLVLDCTDNF--------ATRYLINDACVKLGK-PLVSGAVLG  146 (228)
T ss_pred             cceeC--HHHHHHHHhC-CCEEEEcCCCH--------HHHHHHHHHHHHcCC-CEEEEEecc
Confidence            55553  3567778888 99999886421        111456677888875 677766543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.59  E-value=0.00023  Score=62.34  Aligned_cols=105  Identities=18%  Similarity=0.100  Sum_probs=61.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--------CCCCe------EEEEcccCCChHHHHHHh
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--------DNPSL------QIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--------~~~~~------~~~~~D~~d~~~~~~~~~  132 (296)
                      ++|.|+| .|.+|..++..|+++|++|++.+|+++........        ...+.      ......+.- ..++.+++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~-~~~~~~a~   80 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV-TDSLADAV   80 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE-ECcHHHhh
Confidence            5799999 69999999999999999999999997654421100        00000      000001111 12355566


Q ss_pred             cCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceec
Q 022495          133 GDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVN  181 (296)
Q Consensus       133 ~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~  181 (296)
                      ++ +|+|+.+...       .....+.+++.+.+...+.+|+.||+..+
T Consensus        81 ~~-ad~Vi~avpe-------~~~~k~~~~~~l~~~~~~~~ii~ssts~~  121 (308)
T PRK06129         81 AD-ADYVQESAPE-------NLELKRALFAELDALAPPHAILASSTSAL  121 (308)
T ss_pred             CC-CCEEEECCcC-------CHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence            77 9999988631       11111445554444433456666776643

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.58  E-value=0.00031  Score=61.95  Aligned_cols=95  Identities=23%  Similarity=0.312  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEE--EEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKA--GVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +++|.|+||||++|..+++.|.++++.+.-  ..++.....+.+.  ..+   ...++.+ .+.. + +++ +|+||.++
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~--~~~---~~l~~~~-~~~~-~-~~~-vD~vFla~   74 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP--FAG---KNLRVRE-VDSF-D-FSQ-VQLAFFAA   74 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec--cCC---cceEEee-CChH-H-hcC-CCEEEEcC
Confidence            478999999999999999999987764332  2233333222121  111   2344443 2222 2 567 99999887


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +..         ....+++.+.+.|+ ++|=.|+..
T Consensus        75 p~~---------~s~~~v~~~~~~G~-~VIDlS~~f  100 (336)
T PRK05671         75 GAA---------VSRSFAEKARAAGC-SVIDLSGAL  100 (336)
T ss_pred             CHH---------HHHHHHHHHHHCCC-eEEECchhh
Confidence            511         11557888888886 577777665

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.57  E-value=0.0014  Score=54.08  Aligned_cols=107  Identities=23%  Similarity=0.275  Sum_probs=67.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCc---chhhh------------------cccC--CCCCeEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL---DKAKT------------------TLSK--DNPSLQIVK  118 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~~------------------~~~~--~~~~~~~~~  118 (296)
                      .++..+|+|.|+ |++|+.+++.|+..|. +++++|.+.   +.+..                  .+..  ...+++.+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            456789999995 9999999999999996 588888772   11110                  0000  123444555


Q ss_pred             cccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHc-CCCEEEEEccceecc
Q 022495          119 ADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKR-GVNRFILISSILVNG  182 (296)
Q Consensus       119 ~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~~SS~~~~~  182 (296)
                      ..+++  +.+.+.+++ +|+||.|...        ......+.+.+.+. ++ .+|+.+....|+
T Consensus       104 ~~i~~--~~~~~~~~~-~DvVI~a~D~--------~~~r~~l~~~~~~~~~~-p~I~~~~~~~~~  156 (212)
T PRK08644        104 EKIDE--DNIEELFKD-CDIVVEAFDN--------AETKAMLVETVLEHPGK-KLVAASGMAGYG  156 (212)
T ss_pred             eecCH--HHHHHHHcC-CCEEEECCCC--------HHHHHHHHHHHHHhCCC-CEEEeehhhccC
Confidence            55544  456677888 9999988421        11114566777777 64 677765544333

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.56  E-value=0.00037  Score=64.36  Aligned_cols=76  Identities=18%  Similarity=0.162  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh---hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      +++|+|+|||++| +|...++.|+++|++|++.+++.....   +.+  ...++.+..++..   ..+.  -.+ +|.||
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l--~~~g~~~~~~~~~---~~~~--~~~-~d~vV   73 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQEL--LEEGIKVICGSHP---LELL--DED-FDLMV   73 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHH--HhcCCEEEeCCCC---HHHh--cCc-CCEEE
Confidence            4688999999966 999999999999999999987653211   111  1234555544321   1121  124 89999


Q ss_pred             EcCCCCCC
Q 022495          141 CATGFQPG  148 (296)
Q Consensus       141 ~~ag~~~~  148 (296)
                      .++|+...
T Consensus        74 ~s~gi~~~   81 (447)
T PRK02472         74 KNPGIPYT   81 (447)
T ss_pred             ECCCCCCC
Confidence            99998654

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.56  E-value=0.0016  Score=53.16  Aligned_cols=110  Identities=22%  Similarity=0.360  Sum_probs=69.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhc------------------------ccCCCC--CeE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT------------------------LSKDNP--SLQ  115 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~------------------------~~~~~~--~~~  115 (296)
                      .++..+|+|.|+ |++|.++++.|+..|. ++++++.+.-....+                        +...++  +++
T Consensus        16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~   94 (198)
T cd01485          16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS   94 (198)
T ss_pred             HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence            456789999997 5699999999999995 588877663211100                        111123  345


Q ss_pred             EEEcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccC
Q 022495          116 IVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGA  183 (296)
Q Consensus       116 ~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~  183 (296)
                      .+..++.+..+...+.+++ +|+||.+...        ......+-+.|++.++ .+|+.++.+.||.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~-~dvVi~~~d~--------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~  152 (198)
T cd01485          95 IVEEDSLSNDSNIEEYLQK-FTLVIATEEN--------YERTAKVNDVCRKHHI-PFISCATYGLIGY  152 (198)
T ss_pred             EEecccccchhhHHHHHhC-CCEEEECCCC--------HHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence            5555554212345666777 9999977421        1112556788888886 7888887766553

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.56  E-value=0.00027  Score=62.82  Aligned_cols=96  Identities=18%  Similarity=0.205  Sum_probs=58.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC-CCeEEEE-EcCcch---hhhcccCCCCCeEEE-EcccCCChHHHHHHhcCCCCEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAG-VRDLDK---AKTTLSKDNPSLQIV-KADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~-~r~~~~---~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ++|.|+||||++|..+++.|.+. +.+++.+ ++....   ..+..    +.+... ..++.+ . +..+..++ +|+||
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~----~~l~~~~~~~~~~-~-~~~~~~~~-~DvVf   73 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVH----PHLRGLVDLNLEP-I-DEEEIAED-ADVVF   73 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhC----ccccccCCceeec-C-CHHHhhcC-CCEEE
Confidence            47999999999999999999987 5777744 433311   11111    111111 112222 1 12333356 99999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      .|.+..         ....+++.+.+.| .++|=.|+..
T Consensus        74 ~alP~~---------~s~~~~~~~~~~G-~~VIDlS~~f  102 (346)
T TIGR01850        74 LALPHG---------VSAELAPELLAAG-VKVIDLSADF  102 (346)
T ss_pred             ECCCch---------HHHHHHHHHHhCC-CEEEeCChhh
Confidence            987532         1156777777777 4888888875

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.56  E-value=0.00017  Score=71.02  Aligned_cols=151  Identities=16%  Similarity=0.170  Sum_probs=95.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcchhh--h----cccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAK--T----TLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~--~----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ..|.++|+||-|+.|..+++.|.++|.+ +++.+|+.-+..  .    .+...+.++.+-..|++. .+....++..   
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt-~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITT-AEGARGLIEESNK 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchh-hhhHHHHHHHhhh
Confidence            3578999999999999999999999965 666678753321  1    111134455555677776 5555555543   


Q ss_pred             --CCCEEEEcCCCCCCCC-----CcchhHH--------HHHHHHHHHcC--CCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 --DSEAVVCATGFQPGWD-----LFAPWKA--------INLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~-----~~~~~~~--------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                        .+-.|||.|.+.++.-     ......+        .++=+..++.-  .+.||..||.+.-.++.+           
T Consensus      1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~G----------- 1914 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAG----------- 1914 (2376)
T ss_pred             cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCc-----------
Confidence              4778899887544321     1111111        33333333332  468999999876444433           


Q ss_pred             hhHHHHHHHHHHHHHHHH---hCCcEEEEecCcc
Q 022495          198 VFGLTLIAKLQAEQYIRK---SGINYTIIRPGGL  228 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~---~~~~~~~lrp~~i  228 (296)
                       .+.||.+..+.|+++++   .|++=+.|.=|.|
T Consensus      1915 -QtNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1915 -QTNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             -ccccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence             34589999999999864   5777776666544

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.53  E-value=0.00038  Score=65.43  Aligned_cols=44  Identities=30%  Similarity=0.357  Sum_probs=38.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL  107 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~  107 (296)
                      ++++++++|+|+ |++|++++..|++.|++|+++.|+.++..++.
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la  419 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELA  419 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            467899999998 89999999999999999999999887766544

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.52  E-value=0.0008  Score=59.17  Aligned_cols=105  Identities=21%  Similarity=0.149  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccC-CC----CCe-EEEEcccCCChHHHHHHhcCCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSK-DN----PSL-QIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~----~~~-~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      +.++|.|+|| |.+|+.++..|+..| .+|++++++++........ .+    .+. ..+.+ ..|    .+ .+++ +|
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d----~~-~l~~-AD   75 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN----YE-DIKD-SD   75 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC----HH-HhCC-CC
Confidence            4679999997 999999999999888 6899999887653321100 00    010 11111 112    33 5688 99


Q ss_pred             EEEEcCCCCCCCCCcchhHH-------HHHHHHHHHcCCC-EEEEEcc
Q 022495          138 AVVCATGFQPGWDLFAPWKA-------INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~-------~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      +||.++|.............       +.+++.+.+...+ .+|++|.
T Consensus        76 iVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         76 VVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999987543221111111       7777877777644 3666654

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.52  E-value=0.0014  Score=55.08  Aligned_cols=104  Identities=21%  Similarity=0.252  Sum_probs=65.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhh----------------------cccCCCCC--eEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNPS--LQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----------------------~~~~~~~~--~~~~  117 (296)
                      .+++.+|+|.|+ |++|+.+++.|+..|. ++++++.+.-....                      .+...++.  ++.+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            456789999996 9999999999999994 67777766422110                      00011233  3333


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ...++  .+.+.+.+++ .|+||.+....        .....+-+++.+.++ .+|+.++..
T Consensus       100 ~~~i~--~~~~~~~~~~-~DlVvd~~D~~--------~~r~~ln~~~~~~~i-p~v~~~~~g  149 (240)
T TIGR02355       100 NAKLD--DAELAALIAE-HDIVVDCTDNV--------EVRNQLNRQCFAAKV-PLVSGAAIR  149 (240)
T ss_pred             eccCC--HHHHHHHhhc-CCEEEEcCCCH--------HHHHHHHHHHHHcCC-CEEEEEecc
Confidence            33332  3556777888 99999886321        111445677788875 677765544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.51  E-value=0.00083  Score=60.29  Aligned_cols=104  Identities=10%  Similarity=0.085  Sum_probs=68.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ...+++|+|+ |.+|..+++.|...|.+|++++|++++.+........   .+..+..+ .+.+.+.+.+ .|+||++++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~---~v~~~~~~-~~~l~~~l~~-aDvVI~a~~  239 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG---RIHTRYSN-AYEIEDAVKR-ADLLIGAVL  239 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc---eeEeccCC-HHHHHHHHcc-CCEEEEccc
Confidence            4578999986 9999999999999999999999988765543211111   22345556 6778888888 999999986


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ......+..  -....++.++..  ..||-++..
T Consensus       240 ~~g~~~p~l--it~~~l~~mk~g--~vIvDva~d  269 (370)
T TIGR00518       240 IPGAKAPKL--VSNSLVAQMKPG--AVIVDVAID  269 (370)
T ss_pred             cCCCCCCcC--cCHHHHhcCCCC--CEEEEEecC
Confidence            533211110  014455555433  357777754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08223 hypothetical protein; Validated

Probab=97.48  E-value=0.0022  Score=54.98  Aligned_cols=106  Identities=14%  Similarity=0.213  Sum_probs=67.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhh----------------------hcccCCCC--CeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK----------------------TTLSKDNP--SLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------------------~~~~~~~~--~~~~~  117 (296)
                      .+++.+|+|.|+ |++|+.+++.|+..|. +++++|.+.-...                      +.+...++  +++.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            456789999996 9999999999999995 6777776631111                      00111123  45555


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ...++.  +.+.+++++ +|+||.+.-..      .......+-++|.+.++ .+|+.+...
T Consensus       103 ~~~l~~--~n~~~ll~~-~DlVvD~~D~~------~~~~r~~ln~~c~~~~i-P~V~~~~~g  154 (287)
T PRK08223        103 PEGIGK--ENADAFLDG-VDVYVDGLDFF------EFDARRLVFAACQQRGI-PALTAAPLG  154 (287)
T ss_pred             ecccCc--cCHHHHHhC-CCEEEECCCCC------cHHHHHHHHHHHHHcCC-CEEEEeccC
Confidence            555554  456777888 99998664210      00111556678888885 677765443

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.47  E-value=0.00062  Score=58.88  Aligned_cols=72  Identities=21%  Similarity=0.276  Sum_probs=54.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +.+.+++++|+|. |.+|+.+++.|...|.+|++.+|++++......   .+...+     + .+.+.+.+.+ .|+||+
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~---~g~~~~-----~-~~~l~~~l~~-aDiVin  215 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE---MGLIPF-----P-LNKLEEKVAE-IDIVIN  215 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeee-----c-HHHHHHHhcc-CCEEEE
Confidence            4678999999996 889999999999999999999999866443221   122211     2 3446677788 999999


Q ss_pred             cCC
Q 022495          142 ATG  144 (296)
Q Consensus       142 ~ag  144 (296)
                      +..
T Consensus       216 t~P  218 (287)
T TIGR02853       216 TIP  218 (287)
T ss_pred             CCC
Confidence            874

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.46  E-value=0.00056  Score=58.65  Aligned_cols=101  Identities=19%  Similarity=0.235  Sum_probs=64.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEE-cccCCChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVK-ADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      +.++++++|.|| |+.+++++..|++.| .+|++..|+.++.+++..........+. .+..+ .+...    . .|+||
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~-~~~~~----~-~dliI  195 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD-LEGLE----E-ADLLI  195 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc-ccccc----c-cCEEE
Confidence            445799999996 999999999999999 5799999999887765431111111111 22222 11111    4 89999


Q ss_pred             EcCCCC--CC-CCCcchhHH----------------HHHHHHHHHcCCC
Q 022495          141 CATGFQ--PG-WDLFAPWKA----------------INLVEACRKRGVN  170 (296)
Q Consensus       141 ~~ag~~--~~-~~~~~~~~~----------------~~~l~~~~~~~~~  170 (296)
                      |+....  .. .+.......                ..+++.|++.|.+
T Consensus       196 NaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         196 NATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             ECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            986532  22 110111111                7899999999864

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.46  E-value=0.0026  Score=53.77  Aligned_cols=103  Identities=19%  Similarity=0.225  Sum_probs=66.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcch---hh-------------------hcccCCC--CCeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---AK-------------------TTLSKDN--PSLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~-------------------~~~~~~~--~~~~~~  117 (296)
                      .++.++|+|.|+ |++|+.+++.|+..|. ++++++.+.-.   +.                   +.+...+  .+++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            467889999997 9999999999999995 67777665311   10                   0011112  344555


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ...+.  .+.+.+.+++ +|+||.+...        ......+-+.+.+.++ .+|+.++.
T Consensus       108 ~~~i~--~~~~~~~~~~-~DiVi~~~D~--------~~~r~~ln~~~~~~~i-p~v~~~~~  156 (245)
T PRK05690        108 NARLD--DDELAALIAG-HDLVLDCTDN--------VATRNQLNRACFAAKK-PLVSGAAI  156 (245)
T ss_pred             eccCC--HHHHHHHHhc-CCEEEecCCC--------HHHHHHHHHHHHHhCC-EEEEeeec
Confidence            55554  3556777888 9999988631        1111456677788775 67775544

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.45  E-value=0.00051  Score=58.75  Aligned_cols=106  Identities=18%  Similarity=0.146  Sum_probs=64.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC----CeEEEEEcCcchhhhcccCCCCCeEE-EEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKG----FAVKAGVRDLDKAKTTLSKDNPSLQI-VKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |.|+||+|.+|..++..|+..|    .+|++.+++++++.........-... ....+.- .++..+.+++ +|+||.++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~-~~d~~~~~~~-aDiVv~t~   78 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI-TDDPYEAFKD-ADVVIITA   78 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE-CCchHHHhCC-CCEEEECC
Confidence            5799999999999999999988    78999998876544221100000000 0112221 1235667888 99999999


Q ss_pred             CCCCCCCCcch----hHH---HHHHHHHHHcCCC-EEEEEc
Q 022495          144 GFQPGWDLFAP----WKA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       144 g~~~~~~~~~~----~~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      |..........    .+.   +.+++.+++.... .+|.+|
T Consensus        79 ~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          79 GVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            86543221111    111   7777887777533 455544

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.44  E-value=0.001  Score=58.32  Aligned_cols=108  Identities=19%  Similarity=0.212  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccC-CCC-CeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK-DNP-SLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +++|.|+|+ |.+|..++..|+..|. +|++.+++++........ ... ........++. .... +.+++ +|+||.+
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d~-~~~~~-aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG-TNDY-EDIAG-SDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe-CCCH-HHHCC-CCEEEEC
Confidence            479999998 9999999999998875 899999987655432110 000 00000011110 1112 34677 9999999


Q ss_pred             CCCCCCCCCcch----hHH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          143 TGFQPGWDLFAP----WKA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       143 ag~~~~~~~~~~----~~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      +|..........    .+.   +.+++.+.+...+ .+|+++.
T Consensus        78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            987553322111    111   6677777666533 4555543

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.43  E-value=0.0034  Score=51.27  Aligned_cols=77  Identities=17%  Similarity=0.253  Sum_probs=54.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcC---cchhhhc------------------ccC--CCCCeEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRD---LDKAKTT------------------LSK--DNPSLQIVK  118 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~------------------~~~--~~~~~~~~~  118 (296)
                      .++.++|+|.|+ |++|+.+++.|+..|. ++++.+++   ++.+...                  +..  ...+++.+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            456789999997 9999999999999997 69998888   3332211                  000  112445555


Q ss_pred             cccCCChHHHHHHhcCCCCEEEEcC
Q 022495          119 ADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus       119 ~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      .+++.  +.+.+.+++ +|+||-+.
T Consensus        97 ~~i~~--~~~~~~~~~-~DlVi~a~  118 (200)
T TIGR02354        97 EKITE--ENIDKFFKD-ADIVCEAF  118 (200)
T ss_pred             eeCCH--hHHHHHhcC-CCEEEECC
Confidence            56643  567778888 99999873

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08328 hypothetical protein; Provisional

Probab=97.43  E-value=0.003  Score=52.87  Aligned_cols=107  Identities=15%  Similarity=0.186  Sum_probs=67.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhc-----------------------ccC--CCCCeEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT-----------------------LSK--DNPSLQI  116 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-----------------------~~~--~~~~~~~  116 (296)
                      .+++.+|+|.|+ |++|+++++.|+..|. +++++|.+.-....+                       +..  ....++.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~  102 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET  102 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence            456789999995 9999999999999995 677777553111100                       000  1233444


Q ss_pred             EEcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceecc
Q 022495          117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNG  182 (296)
Q Consensus       117 ~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~  182 (296)
                      +...++  .+.+.+.+++ .|+||.|....        .....+-+.|++.++ .+|+.++.+.||
T Consensus       103 ~~~~~~--~~~~~~~l~~-~D~Vid~~d~~--------~~r~~l~~~~~~~~i-p~i~g~~~g~~G  156 (231)
T PRK08328        103 FVGRLS--EENIDEVLKG-VDVIVDCLDNF--------ETRYLLDDYAHKKGI-PLVHGAVEGTYG  156 (231)
T ss_pred             EeccCC--HHHHHHHHhc-CCEEEECCCCH--------HHHHHHHHHHHHcCC-CEEEEeeccCEE
Confidence            455553  3556777888 99999886321        111345566778775 688777665554

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.42  E-value=0.006  Score=56.31  Aligned_cols=77  Identities=22%  Similarity=0.282  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-hhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +.+++|+|+|+ |.+|.++++.|.++|++|++.+..+... ...+.....++.++.++..+  .    .+.+ +|.||..
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~--~----~~~~-~d~vv~s   74 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD--A----LDNG-FDILALS   74 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH--H----HHhC-CCEEEEC
Confidence            45789999997 6999999999999999999988765431 11121111356666554322  1    3356 9999999


Q ss_pred             CCCCCC
Q 022495          143 TGFQPG  148 (296)
Q Consensus       143 ag~~~~  148 (296)
                      .|+.+.
T Consensus        75 pgi~~~   80 (445)
T PRK04308         75 PGISER   80 (445)
T ss_pred             CCCCCC
Confidence            998754

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.40  E-value=0.00084  Score=53.14  Aligned_cols=58  Identities=24%  Similarity=0.338  Sum_probs=46.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++.+++|+|+|+++.+|..+++.|.++|.+|++..|+.                         +.+.+.+.+ .|+||.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-------------------------~~l~~~l~~-aDiVIsa   94 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-------------------------KNLKEHTKQ-ADIVIVA   94 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-------------------------hhHHHHHhh-CCEEEEc
Confidence            57899999999866789999999999999999888753                         124556677 8999888


Q ss_pred             CCCC
Q 022495          143 TGFQ  146 (296)
Q Consensus       143 ag~~  146 (296)
                      .+..
T Consensus        95 t~~~   98 (168)
T cd01080          95 VGKP   98 (168)
T ss_pred             CCCC
Confidence            7653

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.38  E-value=0.0029  Score=55.37  Aligned_cols=99  Identities=15%  Similarity=0.142  Sum_probs=61.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhh----cccC--CCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKT----TLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      |+|.|+|+ |.+|..++..|+.+|  .+|+++++++++...    +...  .........   .| .    +.+++ +|+
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d-~----~~l~~-aDi   70 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GD-Y----ADCKG-ADV   70 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CC-H----HHhCC-CCE
Confidence            47999997 999999999999999  589999998765442    1110  001122111   22 2    33677 999


Q ss_pred             EEEcCCCCCCCCCcchhH-----H---HHHHHHHHHcCCC-EEEEEc
Q 022495          139 VVCATGFQPGWDLFAPWK-----A---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~-----~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      ||.++|....... ....     .   +.+++.+++.+.+ .++.++
T Consensus        71 Viita~~~~~~~~-~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          71 VVITAGANQKPGE-TRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EEEccCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999997543221 1111     1   6677777766533 444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.38  E-value=0.001  Score=59.25  Aligned_cols=98  Identities=24%  Similarity=0.229  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCC--C------CC-eEEEEcccCCChHHHHHHhcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKD--N------PS-LQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~--~------~~-~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      ++++|+|+||+|++|+.+++.|.+.. .+++++.++.....+.....  .      .. ..-+...-.+ .+.    +.+
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~----~~~   76 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTD-PEA----VDD   76 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCC-HHH----hcC
Confidence            35799999999999999999999875 48888756654332211100  0      00 0001111123 232    346


Q ss_pred             CCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          135 DSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                       +|+|+.+.+-.         ....+++.+.+.|++ +|-.|+.
T Consensus        77 -~DvVf~a~p~~---------~s~~~~~~~~~~G~~-vIDls~~  109 (349)
T PRK08664         77 -VDIVFSALPSD---------VAGEVEEEFAKAGKP-VFSNASA  109 (349)
T ss_pred             -CCEEEEeCChh---------HHHHHHHHHHHCCCE-EEECCch
Confidence             99998875421         114566778788874 4444443

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.37  E-value=0.0016  Score=57.01  Aligned_cols=96  Identities=23%  Similarity=0.220  Sum_probs=67.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+++|+|+|+ |++|...++.+...|++|++++|++++.+...+   -+.+.+...- | .+.....-+. +|+++.+++
T Consensus       166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~---lGAd~~i~~~-~-~~~~~~~~~~-~d~ii~tv~  238 (339)
T COG1064         166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK---LGADHVINSS-D-SDALEAVKEI-ADAIIDTVG  238 (339)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH---hCCcEEEEcC-C-chhhHHhHhh-CcEEEECCC
Confidence            3789999998 599999999888899999999999988764432   2233322222 5 5555555555 999999987


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                       ....        ...++.++..|  ++|.++-.
T Consensus       239 -~~~~--------~~~l~~l~~~G--~~v~vG~~  261 (339)
T COG1064         239 -PATL--------EPSLKALRRGG--TLVLVGLP  261 (339)
T ss_pred             -hhhH--------HHHHHHHhcCC--EEEEECCC
Confidence             3221        45667677665  88888754

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.37  E-value=0.00059  Score=61.99  Aligned_cols=75  Identities=17%  Similarity=0.305  Sum_probs=56.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++++|+|.|+ |++|+.+++.|.+.| .++++..|+.++...+.... ...     .+.. .+.+.+.+.+ .|+||+
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~-~~~-----~~~~-~~~l~~~l~~-aDiVI~  248 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF-RNA-----SAHY-LSELPQLIKK-ADIIIA  248 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh-cCC-----eEec-HHHHHHHhcc-CCEEEE
Confidence            578899999996 999999999999999 47999999988776554311 111     2222 3556777888 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      |.+..
T Consensus       249 aT~a~  253 (414)
T PRK13940        249 AVNVL  253 (414)
T ss_pred             CcCCC
Confidence            98754

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.36  E-value=0.00047  Score=63.96  Aligned_cols=73  Identities=15%  Similarity=0.185  Sum_probs=51.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++++++++|+|+ |++|++++..|.+.|++|++.+|+.++..++....  +...  .++.+    +. .+.+ +|+||+
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~--~~~~--~~~~~----~~-~l~~-~DiVIn  396 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC--QGKA--FPLES----LP-ELHR-IDIIIN  396 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--ccce--echhH----hc-ccCC-CCEEEE
Confidence            3567899999995 89999999999999999999999887665443211  1111  12222    21 1456 999999


Q ss_pred             cCCC
Q 022495          142 ATGF  145 (296)
Q Consensus       142 ~ag~  145 (296)
                      |...
T Consensus       397 atP~  400 (477)
T PRK09310        397 CLPP  400 (477)
T ss_pred             cCCC
Confidence            9754

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=97.36  E-value=0.0025  Score=46.18  Aligned_cols=90  Identities=21%  Similarity=0.349  Sum_probs=59.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++++++++|+|| |.+|..=++.|++.|++|++++......+       ..+++..-++       .+.+.+ .+.||-+
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~~-------~~i~~~~~~~-------~~~l~~-~~lV~~a   67 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFSE-------GLIQLIRREF-------EEDLDG-ADLVFAA   67 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHHH-------TSCEEEESS--------GGGCTT-ESEEEE-
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhhh-------hHHHHHhhhH-------HHHHhh-heEEEec
Confidence            567999999997 99999999999999999999988861111       3445443332       233666 8888855


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .+        .......+.+.+++.+  .+|+++..
T Consensus        68 t~--------d~~~n~~i~~~a~~~~--i~vn~~D~   93 (103)
T PF13241_consen   68 TD--------DPELNEAIYADARARG--ILVNVVDD   93 (103)
T ss_dssp             SS---------HHHHHHHHHHHHHTT--SEEEETT-
T ss_pred             CC--------CHHHHHHHHHHHhhCC--EEEEECCC
Confidence            43        1222367778888876  48887765

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.35  E-value=0.0022  Score=57.83  Aligned_cols=104  Identities=23%  Similarity=0.289  Sum_probs=67.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCc-------------------chhhh---cccCCCCC--eEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL-------------------DKAKT---TLSKDNPS--LQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~---~~~~~~~~--~~~~  117 (296)
                      .+++++|+|.|+ |++|+.+++.|+..|. ++++++++.                   .+...   .+....+.  ++.+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            356789999985 9999999999999996 688888872                   11111   11111233  3344


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ...+.  .+.+.+.+++ +|+||.+....        .....+-+.|.+.++ .+|+.+...
T Consensus       211 ~~~~~--~~~~~~~~~~-~D~Vv~~~d~~--------~~r~~ln~~~~~~~i-p~i~~~~~g  260 (376)
T PRK08762        211 QERVT--SDNVEALLQD-VDVVVDGADNF--------PTRYLLNDACVKLGK-PLVYGAVFR  260 (376)
T ss_pred             eccCC--hHHHHHHHhC-CCEEEECCCCH--------HHHHHHHHHHHHcCC-CEEEEEecc
Confidence            44443  3456777888 99999987421        111346677888885 677776543

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.34  E-value=0.0011  Score=54.34  Aligned_cols=73  Identities=18%  Similarity=0.264  Sum_probs=50.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      .++++++|+|+|| |-+|...++.|++.|++|+++.+.... ..++..  ...+.+..-++..      ..+.+ .|.||
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~--~~~i~~~~~~~~~------~~l~~-adlVi   75 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVE--EGKIRWKQKEFEP------SDIVD-AFLVI   75 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh--CCCEEEEecCCCh------hhcCC-ceEEE
Confidence            3567999999997 999999999999999999998876432 222221  2345555443332      22456 89888


Q ss_pred             EcCC
Q 022495          141 CATG  144 (296)
Q Consensus       141 ~~ag  144 (296)
                      .+.+
T Consensus        76 aaT~   79 (202)
T PRK06718         76 AATN   79 (202)
T ss_pred             EcCC
Confidence            7654

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.34  E-value=0.0027  Score=55.45  Aligned_cols=99  Identities=18%  Similarity=0.181  Sum_probs=62.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhccc---C----C-CCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLS---K----D-NPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~---~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      ||.|+|+ |++|..+|..|+.+|.  ++++++.+++.+.....   .    . ..++++..+|        .+.+++ +|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~--------y~~~~~-aD   70 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD--------YDDCAD-AD   70 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC--------HHHhCC-CC
Confidence            5889998 9999999999998873  69999988765432111   0    1 1133443333        234677 99


Q ss_pred             EEEEcCCCCCCCCCc----c--hhHH---HHHHHHHHHcCCCEEEEEc
Q 022495          138 AVVCATGFQPGWDLF----A--PWKA---INLVEACRKRGVNRFILIS  176 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~----~--~~~~---~~~l~~~~~~~~~~iV~~S  176 (296)
                      +||.+||........    +  ..+.   +.+.+.+.+.+..-++.+-
T Consensus        71 ivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (307)
T cd05290          71 IIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILI  118 (307)
T ss_pred             EEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            999999975432211    1  1111   7788888887744444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.34  E-value=0.0017  Score=61.70  Aligned_cols=72  Identities=14%  Similarity=0.189  Sum_probs=59.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      .+++|.|+ |-+|+.+++.|.++|++|++++.++++.++...   .+...+.+|.+| ++.++++ +++ +|.++-+.+
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~---~g~~~i~GD~~~-~~~L~~a~i~~-a~~viv~~~  490 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE---RGIRAVLGNAAN-EEIMQLAHLDC-ARWLLLTIP  490 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---CCCeEEEcCCCC-HHHHHhcCccc-cCEEEEEcC
Confidence            47899985 999999999999999999999999887766542   578999999999 7877765 344 898886653

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.33  E-value=0.00097  Score=59.11  Aligned_cols=91  Identities=15%  Similarity=0.217  Sum_probs=57.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEE---EEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVK---AGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      +|+|.||||++|..+++.|.++|+.++   .+.+..+.-+.+.   ..+......|+..      ..+.+ +|+||.++|
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~---~~~~~~~~~~~~~------~~~~~-~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT---FKGKELEVNEAKI------ESFEG-IDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee---eCCeeEEEEeCCh------HHhcC-CCEEEECCC
Confidence            589999999999999999999887644   3445543222211   1224445555532      22467 999999987


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ...         ...+++.+.+.|+ ++|=.|+.
T Consensus        71 ~~~---------s~~~a~~~~~~G~-~VID~ss~   94 (339)
T TIGR01296        71 GSV---------SKEFAPKAAKCGA-IVIDNTSA   94 (339)
T ss_pred             HHH---------HHHHHHHHHHCCC-EEEECCHH
Confidence            421         1455666666676 56655654

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.33  E-value=0.0032  Score=56.21  Aligned_cols=103  Identities=17%  Similarity=0.177  Sum_probs=67.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhh---h-------------------cccCCCC--CeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK---T-------------------TLSKDNP--SLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~-------------------~~~~~~~--~~~~~  117 (296)
                      .+++.+|+|.|+ |++|+.+++.|+..|. ++++++.+.-...   .                   .+...++  +++.+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            467889999996 9999999999999995 6777777641111   0                   0111123  44555


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccce
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ...++.  +...+.+++ +|+||.+..-         ... ..+-++|.+.++ .+|+.++.+
T Consensus       104 ~~~i~~--~~~~~~~~~-~DvVvd~~d~---------~~~r~~~n~~c~~~~i-p~v~~~~~g  153 (355)
T PRK05597        104 VRRLTW--SNALDELRD-ADVILDGSDN---------FDTRHLASWAAARLGI-PHVWASILG  153 (355)
T ss_pred             EeecCH--HHHHHHHhC-CCEEEECCCC---------HHHHHHHHHHHHHcCC-CEEEEEEec
Confidence            555553  456677888 9999988731         122 345567777775 577766544

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.33  E-value=0.0048  Score=52.57  Aligned_cols=106  Identities=18%  Similarity=0.193  Sum_probs=65.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhh----------------------hcccCCCCCeEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAK----------------------TTLSKDNPSLQIVKA  119 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~----------------------~~~~~~~~~~~~~~~  119 (296)
                      .+++.+|+|.|+ |++|+++++.|+..| .++++++.+.-...                      +.+...++.+++...
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            456789999995 999999999999999 57888876632111                      001112233333222


Q ss_pred             -ccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          120 -DVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       120 -D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                       +..+ .+...+.+...+|+||.+....        .....+.+.|++.++ .+|.+...+
T Consensus       106 ~~~i~-~e~~~~ll~~~~D~VIdaiD~~--------~~k~~L~~~c~~~~i-p~I~~gGag  156 (268)
T PRK15116        106 DDFIT-PDNVAEYMSAGFSYVIDAIDSV--------RPKAALIAYCRRNKI-PLVTTGGAG  156 (268)
T ss_pred             ecccC-hhhHHHHhcCCCCEEEEcCCCH--------HHHHHHHHHHHHcCC-CEEEECCcc
Confidence             2223 3556666642399999886521        112567888888876 566655543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.32  E-value=0.00047  Score=56.37  Aligned_cols=71  Identities=17%  Similarity=0.199  Sum_probs=49.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++++|+++|+|. |.+|+.+++.|.+.|++|++.+++++...+.....  +...+  |.    +.+..  .. +|+++.
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~--g~~~v--~~----~~l~~--~~-~Dv~vp   91 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELF--GATVV--AP----EEIYS--VD-ADVFAP   91 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc--CCEEE--cc----hhhcc--cc-CCEEEe
Confidence            4577999999997 79999999999999999999998877655433211  22221  21    11211  14 999998


Q ss_pred             cCC
Q 022495          142 ATG  144 (296)
Q Consensus       142 ~ag  144 (296)
                      ||.
T Consensus        92 ~A~   94 (200)
T cd01075          92 CAL   94 (200)
T ss_pred             ccc
Confidence            874

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.32  E-value=0.0026  Score=47.81  Aligned_cols=93  Identities=22%  Similarity=0.364  Sum_probs=54.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHH-CCCeEEEE-EcCcchhh-hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLA-KGFAVKAG-VRDLDKAK-TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      ++|+|.|++|.+|+.+++.+.+ .|.++++. +|+++... +... .-.+..  ...+.- .+++.+++.. +|++|.+.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g-~~~~~~--~~~~~v-~~~l~~~~~~-~DVvIDfT   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVG-ELAGIG--PLGVPV-TDDLEELLEE-ADVVIDFT   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCH-HHCTSS--T-SSBE-BS-HHHHTTH--SEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhh-hhhCcC--Cccccc-chhHHHhccc-CCEEEEcC
Confidence            4899999999999999999999 57886655 55542211 0000 000000  111111 3457888888 99999886


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                      .         +......++.+.++++ .+|.
T Consensus        76 ~---------p~~~~~~~~~~~~~g~-~~Vi   96 (124)
T PF01113_consen   76 N---------PDAVYDNLEYALKHGV-PLVI   96 (124)
T ss_dssp             ----------HHHHHHHHHHHHHHT--EEEE
T ss_pred             C---------hHHhHHHHHHHHhCCC-CEEE
Confidence            2         2333667788888875 4443

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.32  E-value=0.0018  Score=56.10  Aligned_cols=77  Identities=22%  Similarity=0.305  Sum_probs=50.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcc---hhhhcccCCC----CCeEEEEcccCCChHHHHHHhcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD---KAKTTLSKDN----PSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      ++++++++|.|+ |+.+++++-.|...|. +|+++.|+++   +.+++.....    ..+.+  .++.+ .+.+.+.+.+
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~-~~~l~~~~~~  196 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLAD-QQAFAEALAS  196 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhh-hhhhhhhccc
Confidence            467889999996 7779999999999995 7999999853   4443321111    11222  22222 2334555666


Q ss_pred             CCCEEEEcCC
Q 022495          135 DSEAVVCATG  144 (296)
Q Consensus       135 ~~d~vv~~ag  144 (296)
                       .|+|||+..
T Consensus       197 -aDivINaTp  205 (288)
T PRK12749        197 -ADILTNGTK  205 (288)
T ss_pred             -CCEEEECCC
Confidence             999999764

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.32  E-value=0.0026  Score=51.88  Aligned_cols=106  Identities=22%  Similarity=0.311  Sum_probs=66.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhh----------------------cccCCCC--CeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNP--SLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----------------------~~~~~~~--~~~~~  117 (296)
                      .+++++|+|.|+ |++|.++++.|+..|. +++++|.+.-....                      .+...++  +++.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            456789999986 6699999999999995 57777765321110                      0111123  34444


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceecc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNG  182 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~  182 (296)
                      ...+.+   ...+.+++ +|+||.+...        ......+-+.|++.++ .+|+.++.+.||
T Consensus        97 ~~~~~~---~~~~~~~~-~dvVi~~~~~--------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G  148 (197)
T cd01492          97 TDDISE---KPEEFFSQ-FDVVVATELS--------RAELVKINELCRKLGV-KFYATGVHGLFG  148 (197)
T ss_pred             ecCccc---cHHHHHhC-CCEEEECCCC--------HHHHHHHHHHHHHcCC-CEEEEEecCCEE
Confidence            444443   23455777 9999977531        1122556677888886 688877766554

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.32  E-value=0.0024  Score=59.30  Aligned_cols=105  Identities=14%  Similarity=0.118  Sum_probs=68.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC-------------h--HHH-
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-------------S--AKL-  128 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-------------~--~~~-  128 (296)
                      .+.+|+|+|+ |.+|...+..+...|.+|+++++++++.+....   -+.+++..|..+.             .  +.. 
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes---lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES---MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---cCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            4689999996 999999999999999999999999887664332   3445443333220             0  111 


Q ss_pred             ---HHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          129 ---SEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       129 ---~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                         .+..++ +|+||.++|......+..  -.+..++.++..  +.||.++..
T Consensus       240 ~~~~~~~~g-aDVVIetag~pg~~aP~l--it~~~v~~mkpG--gvIVdvg~~  287 (509)
T PRK09424        240 ALFAEQAKE-VDIIITTALIPGKPAPKL--ITAEMVASMKPG--SVIVDLAAE  287 (509)
T ss_pred             HHHHhccCC-CCEEEECCCCCcccCcch--HHHHHHHhcCCC--CEEEEEccC
Confidence               222345 999999999754322211  015566766654  378888763

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.31  E-value=0.0003  Score=58.42  Aligned_cols=39  Identities=41%  Similarity=0.571  Sum_probs=35.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT  105 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~  105 (296)
                      |+|.|+||+|.+|..+++.|.+.|++|++.+|++++...
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~   39 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEE   39 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHH
Confidence            479999999999999999999999999999999877654

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.31  E-value=0.0007  Score=58.49  Aligned_cols=79  Identities=16%  Similarity=0.129  Sum_probs=53.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++++++|.|+ |+.|++++..|.+.|. +|+++.|++++.+++............  +.. .+.+...+.+ .|+||+
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~-~~~~~~~~~~-~DiVIn  196 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEG-DSGGLAIEKA-AEVLVS  196 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccc-hhhhhhcccC-CCEEEE
Confidence            356889999985 9999999999999995 799999998887665431111111111  111 1234445566 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +....
T Consensus       197 aTp~g  201 (282)
T TIGR01809       197 TVPAD  201 (282)
T ss_pred             CCCCC
Confidence            97653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.30  E-value=0.0022  Score=61.37  Aligned_cols=89  Identities=21%  Similarity=0.330  Sum_probs=68.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      ..+|+|.|. |-+|+.+++.|.++|+++++++.+++..+....   .+..++.+|.+| .+.++++ +++ +|.+|.+.+
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~-~~~L~~agi~~-A~~vv~~~~  473 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK---YGYKVYYGDATQ-LELLRAAGAEK-AEAIVITCN  473 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh---CCCeEEEeeCCC-HHHHHhcCCcc-CCEEEEEeC
Confidence            357999985 999999999999999999999999988775543   578899999999 7888775 444 999987764


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcC
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRG  168 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~  168 (296)
                              +......++..+++..
T Consensus       474 --------d~~~n~~i~~~~r~~~  489 (601)
T PRK03659        474 --------EPEDTMKIVELCQQHF  489 (601)
T ss_pred             --------CHHHHHHHHHHHHHHC
Confidence                    1222255666677664

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.29  E-value=0.0011  Score=60.50  Aligned_cols=101  Identities=13%  Similarity=0.076  Sum_probs=64.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC-------CC--eEEEEEcCcchhhhcccC-------CCCCeEEEEcccCCChHHHHH
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK-------GF--AVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~D~~d~~~~~~~  130 (296)
                      -+|.|+|++|.+|.+++-.|+..       |.  ++++++++.+.+.....+       ...++.+...   |     .+
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~-----ye  172 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P-----YE  172 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C-----HH
Confidence            48999999999999999999988       64  688889988766532110       0012221111   2     34


Q ss_pred             HhcCCCCEEEEcCCCCCCCCCcchhHH--------HHHHHHHHH-cCC-CEEEEEcc
Q 022495          131 AIGDDSEAVVCATGFQPGWDLFAPWKA--------INLVEACRK-RGV-NRFILISS  177 (296)
Q Consensus       131 ~~~~~~d~vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~-~~~-~~iV~~SS  177 (296)
                      .+++ +|+||..||...... +.....        +.+.+.+.+ .+. ..||.+|.
T Consensus       173 ~~kd-aDiVVitAG~prkpG-~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        173 VFQD-AEWALLIGAKPRGPG-MERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             HhCc-CCEEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            4677 999999999765432 122211        777788877 453 35665553

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.29  E-value=0.00051  Score=55.42  Aligned_cols=40  Identities=30%  Similarity=0.271  Sum_probs=31.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL  107 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~  107 (296)
                      |+|.|.| .|++|..+|..|++.|++|++.+.++++...+.
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~   40 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALN   40 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHh
Confidence            6899997 699999999999999999999999998776544

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.27  E-value=0.0013  Score=58.08  Aligned_cols=99  Identities=20%  Similarity=0.217  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcC-CCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~-~~d~vv~~  142 (296)
                      +.+|||+||+|++|...++.+...|+.+++...+.++.. ......  ... ..|..+  ..+.+++...+ .+|+|+.+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lG--Ad~-vi~y~~~~~~~~v~~~t~g~gvDvv~D~  218 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELG--ADH-VINYREEDFVEQVRELTGGKGVDVVLDT  218 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcC--CCE-EEcCCcccHHHHHHHHcCCCCceEEEEC
Confidence            789999999999999999988889977777776666555 222111  111 112333  02344444433 49999998


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      .|...         ....++.++..  ++++.+...+
T Consensus       219 vG~~~---------~~~~l~~l~~~--G~lv~ig~~~  244 (326)
T COG0604         219 VGGDT---------FAASLAALAPG--GRLVSIGALS  244 (326)
T ss_pred             CCHHH---------HHHHHHHhccC--CEEEEEecCC
Confidence            87321         13345555554  5888887765

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.26  E-value=0.0015  Score=59.94  Aligned_cols=75  Identities=13%  Similarity=0.294  Sum_probs=53.9

Q ss_pred             ccCCCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCCh
Q 022495           62 VSVKQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS  125 (296)
Q Consensus        62 ~~~~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~  125 (296)
                      .+++||+||||+|                ||-.|.+||+++..+|++|+++.-.-. ..     ...+++++..+  . .
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-----~p~~v~~i~V~--t-a  322 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-----DPQGVKVIHVE--S-A  322 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-----CCCCceEEEec--C-H
Confidence            3589999999976                799999999999999999998864321 11     22456666543  3 4


Q ss_pred             HHHHHHhcC--CCCEEEEcCCC
Q 022495          126 AKLSEAIGD--DSEAVVCATGF  145 (296)
Q Consensus       126 ~~~~~~~~~--~~d~vv~~ag~  145 (296)
                      +.+.+++..  +.|++|++|++
T Consensus       323 ~eM~~av~~~~~~Di~I~aAAV  344 (475)
T PRK13982        323 RQMLAAVEAALPADIAIFAAAV  344 (475)
T ss_pred             HHHHHHHHhhCCCCEEEEeccc
Confidence            444444432  47999999986

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.25  E-value=0.0024  Score=55.94  Aligned_cols=102  Identities=19%  Similarity=0.169  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccC----C--CCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK----D--NPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      .+||.|+|+ |.+|+.++..|+..|  .++++++++.+.+......    .  .....+...  .| .   . .+++ +|
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d-y---~-~~~~-ad   73 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD-Y---S-VTAN-SK   73 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC-H---H-HhCC-CC
Confidence            358999996 999999999999887  4689889887654321110    0  011122210  12 2   2 2677 99


Q ss_pred             EEEEcCCCCCCCCCcchhHH--------HHHHHHHHHcCC-CEEEEEcc
Q 022495          138 AVVCATGFQPGWDLFAPWKA--------INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      +||.+||...... +.....        +.+.+.+++.+. ..+|.+|.
T Consensus        74 ivvitaG~~~k~g-~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          74 VVIVTAGARQNEG-ESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             EEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            9999999755422 122111        777777777763 35555553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.25  E-value=0.0023  Score=56.62  Aligned_cols=109  Identities=24%  Similarity=0.169  Sum_probs=65.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCC----CCeEE-EEcc-----cCCChHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN----PSLQI-VKAD-----VTEGSAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~-~~~D-----~~d~~~~~~~~~~~~~  136 (296)
                      |+|.|+| +|++|...+.-|++.||+|++++.++++.+.+.....    ++++- ++-+     ++= .-+.+++++. .
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f-Ttd~~~a~~~-a   77 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF-TTDYEEAVKD-A   77 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE-EcCHHHHHhc-C
Confidence            6789998 7999999999999999999999999988765543211    11100 0000     110 1235566777 9


Q ss_pred             CEEEEcCCCCCCCCCcch-hHHHHHHHHHHHcCCC-EEEEEccc
Q 022495          137 EAVVCATGFQPGWDLFAP-WKAINLVEACRKRGVN-RFILISSI  178 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~-~~~~~~l~~~~~~~~~-~iV~~SS~  178 (296)
                      |++|-+.|.....+.... ..+..+++...+.-.+ ++|.+=|+
T Consensus        78 dv~fIavgTP~~~dg~aDl~~V~ava~~i~~~~~~~~vvV~KST  121 (414)
T COG1004          78 DVVFIAVGTPPDEDGSADLSYVEAVAKDIGEILDGKAVVVIKST  121 (414)
T ss_pred             CEEEEEcCCCCCCCCCccHHHHHHHHHHHHhhcCCCeEEEEcCC
Confidence            999999987655432222 2223444433333222 55555443

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.25  E-value=0.0036  Score=54.99  Aligned_cols=99  Identities=16%  Similarity=0.148  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH---HHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK---LSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~---~~~~~~~-~~d~vv  140 (296)
                      .+.+++|+|+++.+|..+++.+...|.+|+++++++++...... .  .... ..|..+ .+.   +.+...+ .+|.++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~--~~~~-~~~~~~-~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-L--GADY-VIDYRK-EDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CCCe-EEecCC-hHHHHHHHHHhCCCCCcEEE
Confidence            46799999999999999999999999999999888766543321 1  1111 134444 332   3333322 499999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +++|..         .....++.++..  +++|.+++..
T Consensus       241 ~~~g~~---------~~~~~~~~l~~~--G~~v~~~~~~  268 (342)
T cd08266         241 EHVGAA---------TWEKSLKSLARG--GRLVTCGATT  268 (342)
T ss_pred             ECCcHH---------HHHHHHHHhhcC--CEEEEEecCC
Confidence            998731         124455666554  5899988764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.23  E-value=0.002  Score=56.76  Aligned_cols=100  Identities=15%  Similarity=0.156  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChH-HHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSA-KLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~-~~~~~~~~~~d~vv~  141 (296)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++++......   -+++.+ .|..+  ... .+.....+.+|+++.
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~---lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d  213 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK---LGFDVA-FNYKTVKSLEETLKKASPDGYDCYFD  213 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---cCCCEE-EeccccccHHHHHHHhCCCCeEEEEE
Confidence            46899999999999999998888889999999988776554322   122221 22222  011 222222113999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +.|..         .....++.++..  +++|.++...
T Consensus       214 ~~G~~---------~~~~~~~~l~~~--G~iv~~G~~~  240 (325)
T TIGR02825       214 NVGGE---------FSNTVIGQMKKF--GRIAICGAIS  240 (325)
T ss_pred             CCCHH---------HHHHHHHHhCcC--cEEEEecchh
Confidence            88731         113455555554  4898887653

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.23  E-value=0.0022  Score=56.36  Aligned_cols=98  Identities=22%  Similarity=0.286  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+.+++|+||+|.+|..+++.+...|.+|+++.+++++.+.... ... -.++  |..+..+.+.+ +.+ +|++++++|
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~-~~~~--~~~~~~~~~~~-~~~-~d~v~~~~g  235 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE-LGA-DYVI--DGSKFSEDVKK-LGG-ADVVIELVG  235 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCC-cEEE--ecHHHHHHHHh-ccC-CCEEEECCC
Confidence            46799999999999999999999999999999988765543321 111 1111  21110122332 235 999999987


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ...         ...+++.+...  +++|.++...
T Consensus       236 ~~~---------~~~~~~~~~~~--g~~v~~g~~~  259 (332)
T cd08259         236 SPT---------IEESLRSLNKG--GRLVLIGNVT  259 (332)
T ss_pred             hHH---------HHHHHHHhhcC--CEEEEEcCCC
Confidence            421         24455555544  4788887653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.23  E-value=0.0033  Score=55.66  Aligned_cols=100  Identities=18%  Similarity=0.138  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC---ChHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE---GSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~~~~~d~vv~  141 (296)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++++.......  -++..+ .|..+   ..+.+.+...+.+|+++.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~--lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d  227 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNK--LGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFD  227 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh--cCCcee-EEcCCcccHHHHHHHhCCCCcEEEEE
Confidence            478999999999999999998888999999989887765543210  122221 22221   012233332213999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +.|.         ......++.++..|  ++|.++..
T Consensus       228 ~~g~---------~~~~~~~~~l~~~G--~iv~~G~~  253 (338)
T cd08295         228 NVGG---------KMLDAVLLNMNLHG--RIAACGMI  253 (338)
T ss_pred             CCCH---------HHHHHHHHHhccCc--EEEEeccc
Confidence            8872         11244566665554  88887754

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.22  E-value=0.0018  Score=56.90  Aligned_cols=104  Identities=19%  Similarity=0.223  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhccc----C---CCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLS----K---DNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~----~---~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      +.+||.|+|+ |.+|+.++..|+..|. +|++++++++.......    .   .....++..  ..|    . +.+++ +
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d----~-~~l~~-a   75 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN----Y-EDIAG-S   75 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC----H-HHhCC-C
Confidence            4579999995 9999999999999994 89999998875421110    0   111122221  123    2 34678 9


Q ss_pred             CEEEEcCCCCCCCCC-----cc----hhHH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          137 EAVVCATGFQPGWDL-----FA----PWKA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~~-----~~----~~~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      |+||.++|.......     ..    ..+.   +.+++.+.+...+ .+|++|.
T Consensus        76 DiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         76 DVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             CEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999987543211     00    1111   7777777777644 5666664

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.22  E-value=0.0088  Score=46.02  Aligned_cols=99  Identities=18%  Similarity=0.230  Sum_probs=63.5

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhh----------------------hcccCC--CCCeEEEEcccC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK----------------------TTLSKD--NPSLQIVKADVT  122 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------------------~~~~~~--~~~~~~~~~D~~  122 (296)
                      +|+|.|+ |++|+++++.|+..|. ++++++.+.-...                      +.+...  ..+++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899996 9999999999999996 6888776521110                      000011  233444555554


Q ss_pred             CChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          123 EGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       123 d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +  +...+.+++ +|+||.+...        ......+.+.+++.++ .+|..++..
T Consensus        80 ~--~~~~~~~~~-~diVi~~~d~--------~~~~~~l~~~~~~~~i-~~i~~~~~g  124 (143)
T cd01483          80 E--DNLDDFLDG-VDLVIDAIDN--------IAVRRALNRACKELGI-PVIDAGGLG  124 (143)
T ss_pred             h--hhHHHHhcC-CCEEEECCCC--------HHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence            4  234566777 9999988642        1122567788888875 677777654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.22  E-value=0.002  Score=57.15  Aligned_cols=99  Identities=15%  Similarity=0.144  Sum_probs=62.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~d~vv~~a  143 (296)
                      .+|+|+||+|.+|..+++.+...|. +|+++++++++.......  -+++.+ .|..+  ..+.+.+...+.+|+++.+.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~--lGa~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~  232 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE--LGFDAA-INYKTDNVAERLRELCPEGVDVYFDNV  232 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh--cCCcEE-EECCCCCHHHHHHHHCCCCceEEEECC
Confidence            7999999999999999988888898 799998887765433210  122221 22222  01233333221399999988


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      |..         .....++.++..|  ++|.++...
T Consensus       233 g~~---------~~~~~~~~l~~~G--~iv~~G~~~  257 (345)
T cd08293         233 GGE---------ISDTVISQMNENS--HIILCGQIS  257 (345)
T ss_pred             CcH---------HHHHHHHHhccCC--EEEEEeeee
Confidence            731         1134556555554  888877543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.21  E-value=0.0019  Score=56.11  Aligned_cols=71  Identities=20%  Similarity=0.323  Sum_probs=53.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++++|+|. |.+|+.+++.|...|.+|++.+|+++.......   .+++++     + .+.+.+.+.+ .|+||++
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~---~G~~~~-----~-~~~l~~~l~~-aDiVI~t  217 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE---MGLSPF-----H-LSELAEEVGK-IDIIFNT  217 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---cCCeee-----c-HHHHHHHhCC-CCEEEEC
Confidence            456899999996 889999999999999999999999765433221   223322     2 3446677788 9999998


Q ss_pred             CC
Q 022495          143 TG  144 (296)
Q Consensus       143 ag  144 (296)
                      ++
T Consensus       218 ~p  219 (296)
T PRK08306        218 IP  219 (296)
T ss_pred             CC
Confidence            64

>PLN02602 lactate dehydrogenase

Probab=97.21  E-value=0.002  Score=57.18  Aligned_cols=101  Identities=17%  Similarity=0.203  Sum_probs=62.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccC------CCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK------DNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +||.|+|+ |.+|+.++..|+..|  .++++++++++.+......      ......+ .++ .|    . +.+++ +|+
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~d----y-~~~~d-aDi  108 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TD----Y-AVTAG-SDL  108 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CC----H-HHhCC-CCE
Confidence            69999996 999999999999887  3689999887654322110      0111222 211 12    1 22677 999


Q ss_pred             EEEcCCCCCCCCCcchhHH--------HHHHHHHHHcCC-CEEEEEcc
Q 022495          139 VVCATGFQPGWDLFAPWKA--------INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      ||.+||....... .....        +.+.+.+++.+. ..+|.+|.
T Consensus       109 VVitAG~~~k~g~-tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        109 CIVTAGARQIPGE-SRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             EEECCCCCCCcCC-CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999997654321 11111        677777777763 35555553

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.20  E-value=0.002  Score=50.52  Aligned_cols=70  Identities=19%  Similarity=0.225  Sum_probs=47.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++++++|+|.|| |-+|...++.|++.|++|++++  ++..+++..  ...+.+..-.+.. .     -+.+ .|.||.
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~--l~~i~~~~~~~~~-~-----dl~~-a~lVia   76 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKE--LPYITWKQKTFSN-D-----DIKD-AHLIYA   76 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHh--ccCcEEEecccCh-h-----cCCC-ceEEEE
Confidence            4678999999997 9999999999999999999885  332222221  1244444433332 1     2455 888886


Q ss_pred             cC
Q 022495          142 AT  143 (296)
Q Consensus       142 ~a  143 (296)
                      +.
T Consensus        77 aT   78 (157)
T PRK06719         77 AT   78 (157)
T ss_pred             CC
Confidence            64

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.20  E-value=0.0059  Score=53.26  Aligned_cols=101  Identities=18%  Similarity=0.177  Sum_probs=64.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhc----------------------ccC--CCCCeEEEEcccC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSK--DNPSLQIVKADVT  122 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------------------~~~--~~~~~~~~~~D~~  122 (296)
                      +|+|.|+ |++|.++++.|+..|. +++++|.+.-....+                      +..  ...+++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899996 9999999999999995 677777653221110                      001  2235666677777


Q ss_pred             CChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcccee
Q 022495          123 EGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILV  180 (296)
Q Consensus       123 d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~  180 (296)
                      + .+...+.+++ +|+||.+.-.        ......+-+.|.+.++ .+|..++.+.
T Consensus        80 ~-~~~~~~f~~~-~DvVv~a~Dn--------~~ar~~in~~c~~~~i-p~I~~gt~G~  126 (312)
T cd01489          80 D-PDFNVEFFKQ-FDLVFNALDN--------LAARRHVNKMCLAADV-PLIESGTTGF  126 (312)
T ss_pred             C-ccchHHHHhc-CCEEEECCCC--------HHHHHHHHHHHHHCCC-CEEEEecCcc
Confidence            6 4444566788 9999987521        1112456666777775 6777766554

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN02928 oxidoreductase family protein

Probab=97.19  E-value=0.0017  Score=57.69  Aligned_cols=108  Identities=16%  Similarity=0.187  Sum_probs=66.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc-ccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT-LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .+.+|++.|.| .|.||+.+++.|...|.+|++.+|........ +......+.-+...... ..++.+++.+ .|+|+.
T Consensus       156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~ell~~-aDiVvl  232 (347)
T PLN02928        156 TLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGG-HEDIYEFAGE-ADIVVL  232 (347)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCc-ccCHHHHHhh-CCEEEE
Confidence            57899999999 59999999999999999999998864321110 00000111111101113 4568888888 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +............   ...+..|+..  ..||+++-.
T Consensus       233 ~lPlt~~T~~li~---~~~l~~Mk~g--a~lINvaRG  264 (347)
T PLN02928        233 CCTLTKETAGIVN---DEFLSSMKKG--ALLVNIARG  264 (347)
T ss_pred             CCCCChHhhcccC---HHHHhcCCCC--eEEEECCCc
Confidence            8765433222111   4566666543  267777643

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.19  E-value=0.006  Score=48.69  Aligned_cols=99  Identities=22%  Similarity=0.237  Sum_probs=61.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCc---chhhh------------------cccC--CCCCeEEEEcccCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL---DKAKT------------------TLSK--DNPSLQIVKADVTE  123 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~~------------------~~~~--~~~~~~~~~~D~~d  123 (296)
                      +|+|.|+ |++|+.+++.|+..|. ++++++.+.   +.+..                  .+..  ...+++.+...+..
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            5899995 9999999999999996 588888875   11110                  0000  12344445555543


Q ss_pred             ChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHc-CCCEEEEEccce
Q 022495          124 GSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKR-GVNRFILISSIL  179 (296)
Q Consensus       124 ~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~~SS~~  179 (296)
                        +.+.+.+++ +|+||.+..-        ......+.+.+.+. ++ .+|+.+...
T Consensus        80 --~~~~~~l~~-~DlVi~~~d~--------~~~r~~i~~~~~~~~~i-p~i~~~~~~  124 (174)
T cd01487          80 --NNLEGLFGD-CDIVVEAFDN--------AETKAMLAESLLGNKNK-PVVCASGMA  124 (174)
T ss_pred             --hhHHHHhcC-CCEEEECCCC--------HHHHHHHHHHHHHHCCC-CEEEEehhh
Confidence              456777888 9999988421        11114466766666 54 666654443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.19  E-value=0.0021  Score=55.15  Aligned_cols=101  Identities=12%  Similarity=0.143  Sum_probs=70.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .++++.|+|+.| +|.--++...+.|.+|+++++...+.++.+.  .-+.+.+..-..| ++.++++.+. .|.++|++.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~--~LGAd~fv~~~~d-~d~~~~~~~~-~dg~~~~v~  255 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK--SLGADVFVDSTED-PDIMKAIMKT-TDGGIDTVS  255 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH--hcCcceeEEecCC-HHHHHHHHHh-hcCcceeee
Confidence            489999999877 9998787777789999999999865555442  2455665544447 7888888777 777887764


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .... ...     ..+++.++..|  ++|+++-.
T Consensus       256 ~~a~-~~~-----~~~~~~lk~~G--t~V~vg~p  281 (360)
T KOG0023|consen  256 NLAE-HAL-----EPLLGLLKVNG--TLVLVGLP  281 (360)
T ss_pred             eccc-cch-----HHHHHHhhcCC--EEEEEeCc
Confidence            2211 111     34667777665  89998764

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.19  E-value=0.0032  Score=60.46  Aligned_cols=89  Identities=24%  Similarity=0.324  Sum_probs=67.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      .++|+|.|. |-+|+.+++.|.++|.++++++.++++.+....   .+..++.+|.+| .+.++++ +++ .|.+|.+..
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~-~~~L~~agi~~-A~~vvv~~~  473 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK---FGMKVFYGDATR-MDLLESAGAAK-AEVLINAID  473 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh---cCCeEEEEeCCC-HHHHHhcCCCc-CCEEEEEeC
Confidence            368999985 999999999999999999999999988776543   578899999999 7877764 344 898887753


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcC
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRG  168 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~  168 (296)
                              +......++..+++..
T Consensus       474 --------d~~~n~~i~~~ar~~~  489 (621)
T PRK03562        474 --------DPQTSLQLVELVKEHF  489 (621)
T ss_pred             --------CHHHHHHHHHHHHHhC
Confidence                    1122245555666553

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=97.18  E-value=0.0045  Score=56.10  Aligned_cols=106  Identities=17%  Similarity=0.229  Sum_probs=67.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcch---hhh-------------------cccCCCCC--eEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---AKT-------------------TLSKDNPS--LQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~-------------------~~~~~~~~--~~~~  117 (296)
                      .++..+|+|.|+ |++|+.+++.|+..|. +++++|.+.-.   +..                   .+...++.  ++.+
T Consensus        39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            456789999996 9999999999999995 57777665311   110                   00111233  4445


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccceecc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSILVNG  182 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~~~~~  182 (296)
                      ...++.  +...+.+++ +|+||.|..-         ... ..+-++|.+.++ .+|+.+..+.+|
T Consensus       118 ~~~i~~--~~~~~~~~~-~D~Vvd~~d~---------~~~r~~ln~~~~~~~~-p~v~~~~~g~~G  170 (392)
T PRK07878        118 EFRLDP--SNAVELFSQ-YDLILDGTDN---------FATRYLVNDAAVLAGK-PYVWGSIYRFEG  170 (392)
T ss_pred             eccCCh--hHHHHHHhc-CCEEEECCCC---------HHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence            555543  456677888 9999987631         122 345577788775 677776655444

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.15  E-value=0.0052  Score=56.13  Aligned_cols=40  Identities=18%  Similarity=0.086  Sum_probs=36.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT  106 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~  106 (296)
                      .|+|.|+| .|++|..++..|+++|++|++.++++++...+
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            57899998 59999999999999999999999999887754

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.14  E-value=0.0048  Score=54.19  Aligned_cols=100  Identities=19%  Similarity=0.151  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|+||+|.+|..+++.+...|.+|+++++++++.+....   -+++.+ .|..+.  .+.+.+...+.+|+++.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~---~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~  218 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE---LGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDN  218 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---cCCCEE-EeCCCccHHHHHHHHCCCCcEEEEEC
Confidence            46899999999999999999888899999999988776554432   122222 233330  122333222139999998


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      .|..         .....++.++..  +++|.++...
T Consensus       219 ~g~~---------~~~~~~~~l~~~--G~iv~~g~~~  244 (329)
T cd08294         219 VGGE---------FSSTVLSHMNDF--GRVAVCGSIS  244 (329)
T ss_pred             CCHH---------HHHHHHHhhccC--CEEEEEcchh
Confidence            8721         113445555444  4888887654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.13  E-value=0.0062  Score=54.62  Aligned_cols=103  Identities=15%  Similarity=0.258  Sum_probs=66.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcch---hhh-------------------cccCCCC--CeEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---AKT-------------------TLSKDNP--SLQI  116 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~-------------------~~~~~~~--~~~~  116 (296)
                      ..++..+|+|.|+ |++|..+++.|+..|. ++++++.+.-.   +..                   .+...++  +++.
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~  115 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA  115 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence            3467889999996 9999999999999995 78888877311   110                   0001123  3455


Q ss_pred             EEcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccc
Q 022495          117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       117 ~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +...++  .+.+.+.+++ +|+||.|...         ... ..+-++|.+.++ .+|+.+..
T Consensus       116 ~~~~i~--~~~~~~~~~~-~DlVid~~Dn---------~~~r~~in~~~~~~~i-P~v~~~~~  165 (370)
T PRK05600        116 LRERLT--AENAVELLNG-VDLVLDGSDS---------FATKFLVADAAEITGT-PLVWGTVL  165 (370)
T ss_pred             eeeecC--HHHHHHHHhC-CCEEEECCCC---------HHHHHHHHHHHHHcCC-CEEEEEEe
Confidence            555554  3557778888 9999988632         122 345566777775 56666543

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.13  E-value=0.005  Score=52.44  Aligned_cols=66  Identities=23%  Similarity=0.285  Sum_probs=43.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC-CCeEEEE-EcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAG-VRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ++|.|+|++|.+|+.+++.+.+. +.+++++ +++++.....          -..++.. .+++.+++.+ +|+||.++.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~----------~~~~i~~-~~dl~~ll~~-~DvVid~t~   69 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ----------GALGVAI-TDDLEAVLAD-ADVLIDFTT   69 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc----------CCCCccc-cCCHHHhccC-CCEEEECCC
Confidence            68999999999999999988864 6787764 4554433211          1122322 3345555666 898887763

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.12  E-value=0.0016  Score=59.70  Aligned_cols=74  Identities=26%  Similarity=0.439  Sum_probs=54.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++.+++|+|+|+ |.+|..+++.|...|. +|++.+|++++...+.....  .     ++.+ .+.+.+.+.+ +|+||.
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g--~-----~~~~-~~~~~~~l~~-aDvVI~  248 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG--G-----EAIP-LDELPEALAE-ADIVIS  248 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC--C-----cEee-HHHHHHHhcc-CCEEEE
Confidence            367899999986 9999999999999996 79999999877654432111  1     2223 3445666777 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +.|..
T Consensus       249 aT~s~  253 (423)
T PRK00045        249 STGAP  253 (423)
T ss_pred             CCCCC
Confidence            98643

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.11  E-value=0.0021  Score=55.32  Aligned_cols=58  Identities=22%  Similarity=0.285  Sum_probs=46.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++++|+++|.|++|.+|+.++..|+++|.+|++..|..                         ..+.+.+++ .|+||+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-------------------------~~L~~~~~~-aDIvI~  208 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-------------------------QNLPELVKQ-ADIIVG  208 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-------------------------hhHHHHhcc-CCEEEE
Confidence            467899999999988899999999999999998876521                         224445566 999999


Q ss_pred             cCCC
Q 022495          142 ATGF  145 (296)
Q Consensus       142 ~ag~  145 (296)
                      +.|.
T Consensus       209 AtG~  212 (283)
T PRK14192        209 AVGK  212 (283)
T ss_pred             ccCC
Confidence            8873

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.09  E-value=0.0018  Score=56.80  Aligned_cols=73  Identities=27%  Similarity=0.403  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +.+++|+|.|+ |.+|..+++.|.+.| .+|++.+|++++..++....  +.     ++.+ .+.+.+.+.+ +|+||.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~--g~-----~~~~-~~~~~~~l~~-aDvVi~a  245 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL--GG-----NAVP-LDELLELLNE-ADVVISA  245 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc--CC-----eEEe-HHHHHHHHhc-CCEEEEC
Confidence            56899999996 999999999999876 67999999987765443211  11     2223 3446666777 9999999


Q ss_pred             CCCC
Q 022495          143 TGFQ  146 (296)
Q Consensus       143 ag~~  146 (296)
                      .+..
T Consensus       246 t~~~  249 (311)
T cd05213         246 TGAP  249 (311)
T ss_pred             CCCC
Confidence            8743

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN00203 glutamyl-tRNA reductase

Probab=97.09  E-value=0.0018  Score=60.53  Aligned_cols=75  Identities=20%  Similarity=0.338  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +.+++|+|+|+ |.+|..+++.|...|. +|++..|+.++...+.... +++.....+    .+.+.+.+.+ +|+||.+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~-~g~~i~~~~----~~dl~~al~~-aDVVIsA  336 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF-PDVEIIYKP----LDEMLACAAE-ADVVFTS  336 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh-CCCceEeec----HhhHHHHHhc-CCEEEEc
Confidence            77899999997 9999999999999996 7999999988876554311 122221222    3345666777 9999988


Q ss_pred             CCC
Q 022495          143 TGF  145 (296)
Q Consensus       143 ag~  145 (296)
                      .+.
T Consensus       337 T~s  339 (519)
T PLN00203        337 TSS  339 (519)
T ss_pred             cCC
Confidence            753

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=97.06  E-value=0.0027  Score=55.64  Aligned_cols=93  Identities=18%  Similarity=0.154  Sum_probs=63.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|++.|.| .|.||+.+++.+..-|.+|++.+|.....       ...+        . ..++.+++.. +|+|+.+
T Consensus       142 ~L~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-------~~~~--------~-~~~l~ell~~-sDvv~lh  203 (311)
T PRK08410        142 EIKGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK-------NEEY--------E-RVSLEELLKT-SDIISIH  203 (311)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc-------ccCc--------e-eecHHHHhhc-CCEEEEe
Confidence            57899999999 69999999999988899999888753210       0111        1 2347778888 9999877


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +...........   ...++.|+...  .||++|=.
T Consensus       204 ~Plt~~T~~li~---~~~~~~Mk~~a--~lIN~aRG  234 (311)
T PRK08410        204 APLNEKTKNLIA---YKELKLLKDGA--ILINVGRG  234 (311)
T ss_pred             CCCCchhhcccC---HHHHHhCCCCe--EEEECCCc
Confidence            654443222221   56667676542  67777653

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.03  E-value=0.0019  Score=58.06  Aligned_cols=74  Identities=30%  Similarity=0.462  Sum_probs=59.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +++++++||+|+ |=+|.-++++|.++| .+|++..|+.+++.++....+       +++.. .+.+...+.. .|+||.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-------~~~~~-l~el~~~l~~-~DvVis  244 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-------AEAVA-LEELLEALAE-ADVVIS  244 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-------Ceeec-HHHHHHhhhh-CCEEEE
Confidence            378999999996 999999999999999 689999999998876553111       34444 5667788888 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +.|..
T Consensus       245 sTsa~  249 (414)
T COG0373         245 STSAP  249 (414)
T ss_pred             ecCCC
Confidence            87643

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.03  E-value=0.0024  Score=58.39  Aligned_cols=74  Identities=27%  Similarity=0.394  Sum_probs=54.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .+.+++++|+|+ |.+|..+++.|...| .+|++++|+.++..++....  +...+     + .+.+.+.+.+ +|+||.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~--g~~~i-----~-~~~l~~~l~~-aDvVi~  246 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL--GGEAV-----K-FEDLEEYLAE-ADIVIS  246 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc--CCeEe-----e-HHHHHHHHhh-CCEEEE
Confidence            367899999996 999999999999999 78999999987765433211  11121     2 3446667778 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +.+..
T Consensus       247 aT~s~  251 (417)
T TIGR01035       247 STGAP  251 (417)
T ss_pred             CCCCC
Confidence            97643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.02  E-value=0.0033  Score=55.78  Aligned_cols=94  Identities=14%  Similarity=0.206  Sum_probs=55.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCe---EEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFA---VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .++|.|.||||++|..+++.|.++++.   +..+..... ..+...  ..+......++.  .    +.+.+ +|+||.+
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rs-aGk~~~--~~~~~~~v~~~~--~----~~~~~-~D~vf~a   76 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARS-AGKKVT--FEGRDYTVEELT--E----DSFDG-VDIALFS   76 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCC-CCCeee--ecCceeEEEeCC--H----HHHcC-CCEEEEC
Confidence            468999999999999999999988763   333322211 111111  011222222332  1    23467 9999988


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ++-.         ....+++.+.+.|+ ++|=.|+..
T Consensus        77 ~p~~---------~s~~~~~~~~~~g~-~VIDlS~~f  103 (344)
T PLN02383         77 AGGS---------ISKKFGPIAVDKGA-VVVDNSSAF  103 (344)
T ss_pred             CCcH---------HHHHHHHHHHhCCC-EEEECCchh
Confidence            8632         11456666666664 677777764

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.02  E-value=0.013  Score=48.94  Aligned_cols=104  Identities=22%  Similarity=0.288  Sum_probs=63.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcch---hhh-------------------cccCCCC--CeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---AKT-------------------TLSKDNP--SLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~-------------------~~~~~~~--~~~~~  117 (296)
                      .+++.+|+|.|. |++|+++++.|+..|. ++++++.+.-.   +..                   .+...++  +++.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            356789999995 9999999999999995 67777765311   100                   0001123  34444


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ...++  .+.+.+.+...+|+||.+...        ......+.+.|++.++ .+|...+.
T Consensus        87 ~~~i~--~~~~~~l~~~~~D~VvdaiD~--------~~~k~~L~~~c~~~~i-p~I~s~g~  136 (231)
T cd00755          87 EEFLT--PDNSEDLLGGDPDFVVDAIDS--------IRAKVALIAYCRKRKI-PVISSMGA  136 (231)
T ss_pred             eeecC--HhHHHHHhcCCCCEEEEcCCC--------HHHHHHHHHHHHHhCC-CEEEEeCC
Confidence            44444  244555553239999988631        1112567888888875 56655443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=97.01  E-value=0.0027  Score=55.63  Aligned_cols=95  Identities=16%  Similarity=0.200  Sum_probs=62.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|.|.| .|.||+.+++.|...|.+|++.+|..+..        .++..+    .. .+++.+++++ +|+|+.+
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~--------~~~~~~----~~-~~~l~e~l~~-aDvvv~~  197 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW--------PGVQSF----AG-REELSAFLSQ-TRVLINL  197 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC--------CCceee----cc-cccHHHHHhc-CCEEEEC
Confidence            56789999998 69999999999999999999988865431        122211    12 3568888988 9999988


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ..........   -....++.|+..  .-||+++=
T Consensus       198 lPlt~~T~~l---i~~~~l~~mk~g--a~lIN~aR  227 (312)
T PRK15469        198 LPNTPETVGI---INQQLLEQLPDG--AYLLNLAR  227 (312)
T ss_pred             CCCCHHHHHH---hHHHHHhcCCCC--cEEEECCC
Confidence            7543221100   014455555542  25776653

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.00  E-value=0.0028  Score=56.26  Aligned_cols=77  Identities=14%  Similarity=0.130  Sum_probs=51.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--C-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--D-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~-~~d~vv~  141 (296)
                      +++.|||.||+|++|+..++-+...|..+++..++.++.+-...   -+.. ...|..+ ++..+...+  + ++|+|+.
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~---lGAd-~vvdy~~-~~~~e~~kk~~~~~~DvVlD  231 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK---LGAD-EVVDYKD-ENVVELIKKYTGKGVDVVLD  231 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH---cCCc-EeecCCC-HHHHHHHHhhcCCCccEEEE
Confidence            47899999999999999999888889444445665555442221   1111 2357776 555554444  2 4999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      |.|..
T Consensus       232 ~vg~~  236 (347)
T KOG1198|consen  232 CVGGS  236 (347)
T ss_pred             CCCCC
Confidence            99854

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.99  E-value=0.0051  Score=54.02  Aligned_cols=101  Identities=16%  Similarity=0.092  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|.|++|.+|..+++.+.+.|.+|+++++++++.......... -.++  |..+.  .+.+.+...+.+|+++++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~-~~~~--~~~~~~~~~~v~~~~~~~~d~vi~~  221 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF-DAAI--NYKTPDLAEALKEAAPDGIDVYFDN  221 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC-ceEE--ecCChhHHHHHHHhccCCceEEEEc
Confidence            467999999999999999999999999999998887665433210111 1122  22220  122333322239999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      .|..         .....++.++..  +++|.+++..
T Consensus       222 ~g~~---------~~~~~~~~l~~~--G~~v~~g~~~  247 (329)
T cd05288         222 VGGE---------ILDAALTLLNKG--GRIALCGAIS  247 (329)
T ss_pred             chHH---------HHHHHHHhcCCC--ceEEEEeecc
Confidence            8731         124455555444  4788887653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.99  E-value=0.0025  Score=56.43  Aligned_cols=97  Identities=12%  Similarity=0.063  Sum_probs=63.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|+|.|.|- |.||+.+++.|...|.+|++.+|.+......    ..++     .    ..++.+++.+ .|+|+.+
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~----~~~~-----~----~~~l~ell~~-aDiV~l~  211 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEK----ELGA-----E----YRPLEELLRE-SDFVSLH  211 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHH----HcCC-----E----ecCHHHHHhh-CCEEEEe
Confidence            578999999995 9999999999999999999988875432110    0111     1    1235667777 9999988


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ............   ...++.|+..  .-+|++|...
T Consensus       212 lP~t~~T~~~i~---~~~~~~mk~g--a~lIN~aRg~  243 (333)
T PRK13243        212 VPLTKETYHMIN---EERLKLMKPT--AILVNTARGK  243 (333)
T ss_pred             CCCChHHhhccC---HHHHhcCCCC--eEEEECcCch
Confidence            764432221111   4566666543  3677777653

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.98  E-value=0.0041  Score=54.60  Aligned_cols=76  Identities=18%  Similarity=0.188  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc-------C-CCCCeE--EEEcccCCChHHHHHHhcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-------K-DNPSLQ--IVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~-~~~~~~--~~~~D~~d~~~~~~~~~~~~  135 (296)
                      .++|.|+|+ |-+|+.++..|+..|++|++.+++++.......       . ...+..  .....+.- ..++.+++.+ 
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~-~~~l~~av~~-   83 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF-VATIEACVAD-   83 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee-cCCHHHHhcC-
Confidence            468999985 999999999999999999999998765432110       0 000000  00011111 2346677888 


Q ss_pred             CCEEEEcCC
Q 022495          136 SEAVVCATG  144 (296)
Q Consensus       136 ~d~vv~~ag  144 (296)
                      +|.|+-+..
T Consensus        84 aDlViEavp   92 (321)
T PRK07066         84 ADFIQESAP   92 (321)
T ss_pred             CCEEEECCc
Confidence            999998863

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.96  E-value=0.0099  Score=52.82  Aligned_cols=95  Identities=15%  Similarity=0.181  Sum_probs=61.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHh---cCCCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI---GDDSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~~~d~vv  140 (296)
                      .+++|+|+|+ |.+|...++.+...|. +|+++++++++.+....   -+++.+ .|..+ .+ +.+..   .+ +|++|
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~---lGa~~v-i~~~~-~~-~~~~~~~~g~-~D~vi  240 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE---MGADKL-VNPQN-DD-LDHYKAEKGY-FDVSF  240 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH---cCCcEE-ecCCc-cc-HHHHhccCCC-CCEEE
Confidence            5789999986 9999999998888897 68888988877654332   222222 23333 21 22222   23 89999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      .++|..        ......++.++..  +++|.++.
T Consensus       241 d~~G~~--------~~~~~~~~~l~~~--G~iv~~G~  267 (343)
T PRK09880        241 EVSGHP--------SSINTCLEVTRAK--GVMVQVGM  267 (343)
T ss_pred             ECCCCH--------HHHHHHHHHhhcC--CEEEEEcc
Confidence            998831        1124566666654  48888864

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.95  E-value=0.033  Score=51.95  Aligned_cols=75  Identities=23%  Similarity=0.295  Sum_probs=52.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-h---hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-K---TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      ++++++|+|+|+ |++|..+++.|.++|++|+++++.+... .   +.+  ...+++++.++-.   .    ...+ +|.
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l--~~~gv~~~~~~~~---~----~~~~-~D~   81 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAIL--EALGATVRLGPGP---T----LPED-TDL   81 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHH--HHcCCEEEECCCc---c----ccCC-CCE
Confidence            456789999996 9999999999999999999998664321 1   112  1246676655421   1    2345 899


Q ss_pred             EEEcCCCCCC
Q 022495          139 VVCATGFQPG  148 (296)
Q Consensus       139 vv~~ag~~~~  148 (296)
                      ||...|+.+.
T Consensus        82 Vv~s~Gi~~~   91 (480)
T PRK01438         82 VVTSPGWRPD   91 (480)
T ss_pred             EEECCCcCCC
Confidence            9999998654

>PRK07411 hypothetical protein; Validated

Probab=96.93  E-value=0.011  Score=53.43  Aligned_cols=103  Identities=14%  Similarity=0.162  Sum_probs=65.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcch---hhh-------------------cccC--CCCCeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---AKT-------------------TLSK--DNPSLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~-------------------~~~~--~~~~~~~~  117 (296)
                      .++..+|+|.|+ |++|..+++.|+..|. +++++|.+.-.   +..                   .+..  ...+++.+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            466789999996 9999999999999995 57776665311   110                   0001  12345555


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccce
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ...++.  +...+.+.+ +|+||.|..-         ... ..+-++|.+.++ .+|+.+...
T Consensus       114 ~~~~~~--~~~~~~~~~-~D~Vvd~~d~---------~~~r~~ln~~~~~~~~-p~v~~~~~g  163 (390)
T PRK07411        114 ETRLSS--ENALDILAP-YDVVVDGTDN---------FPTRYLVNDACVLLNK-PNVYGSIFR  163 (390)
T ss_pred             ecccCH--HhHHHHHhC-CCEEEECCCC---------HHHHHHHHHHHHHcCC-CEEEEEEcc
Confidence            555554  456677888 9999988642         112 345566777764 566655443

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.93  E-value=0.0027  Score=56.96  Aligned_cols=101  Identities=11%  Similarity=0.056  Sum_probs=60.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-e----EEE--E--EcCcchhhhcccC-------CCCCeEEEEcccCCChHHHHH
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF-A----VKA--G--VRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~-~----V~~--~--~r~~~~~~~~~~~-------~~~~~~~~~~D~~d~~~~~~~  130 (296)
                      -+|.|+|++|.+|++++-.|+..|. .    |.+  +  +++.+.+......       ...++.+...   |     .+
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~-----y~  116 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P-----YE  116 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C-----HH
Confidence            5899999999999999999998873 2    333  3  6666554421110       0112221111   2     34


Q ss_pred             HhcCCCCEEEEcCCCCCCCCCcchhHH--------HHHHHHHHHcC--CCEEEEEcc
Q 022495          131 AIGDDSEAVVCATGFQPGWDLFAPWKA--------INLVEACRKRG--VNRFILISS  177 (296)
Q Consensus       131 ~~~~~~d~vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~--~~~iV~~SS  177 (296)
                      .+++ +|+||.+||...... ......        +.+.+.+.+..  -..+|.+|.
T Consensus       117 ~~kd-aDIVVitAG~prkpg-~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       117 VFED-ADWALLIGAKPRGPG-MERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             HhCC-CCEEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            4677 999999999765332 122211        77777777743  335666654

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.89  E-value=0.0083  Score=52.43  Aligned_cols=107  Identities=18%  Similarity=0.131  Sum_probs=61.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhccc-CCCCC-eEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLS-KDNPS-LQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |+|.|+|+ |.+|..++..|+.+|. +|+++++.++....... ..... .......+.- ..++.+ +++ +|+||-++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d~~~-~~~-aDiVIita   77 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNNYAD-TAN-SDIVVITA   77 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCCHHH-hCC-CCEEEEcC
Confidence            57999996 9999999999999886 89999987654331110 00000 0000111110 111233 577 99999999


Q ss_pred             CCCCCCCCcc----hhHH---HHHHHHHHHcCC-CEEEEEcc
Q 022495          144 GFQPGWDLFA----PWKA---INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       144 g~~~~~~~~~----~~~~---~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      |.....+...    ..+.   +.+++.+.+.+. ..+|.+|.
T Consensus        78 g~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        78 GLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9765432110    1111   667776666653 35665554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.89  E-value=0.0045  Score=53.15  Aligned_cols=58  Identities=21%  Similarity=0.283  Sum_probs=47.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++++++++|+|.++.+|+.++..|.++|++|+++.+..                         ..+.+.+++ .|+||..
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-------------------------~~l~~~~~~-ADIVIsA  208 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-------------------------KDMASYLKD-ADVIVSA  208 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------------------hhHHHHHhh-CCEEEEC
Confidence            68899999999999999999999999999999876532                         124555666 8999988


Q ss_pred             CCCC
Q 022495          143 TGFQ  146 (296)
Q Consensus       143 ag~~  146 (296)
                      .|..
T Consensus       209 vg~p  212 (286)
T PRK14175        209 VGKP  212 (286)
T ss_pred             CCCC
Confidence            8753

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.89  E-value=0.002  Score=58.76  Aligned_cols=101  Identities=13%  Similarity=0.094  Sum_probs=59.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC---CC----eEEEEEcC--cchhhhcc----cC---CCCCeEEEEcccCCChHHHHH
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK---GF----AVKAGVRD--LDKAKTTL----SK---DNPSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~---g~----~V~~~~r~--~~~~~~~~----~~---~~~~~~~~~~D~~d~~~~~~~  130 (296)
                      -+|+||||+|.||.+|+-.+++-   |.    .+++++..  .+.+....    ..   ...++.+..    +    ..+
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~----~----~~e  195 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT----D----LDV  195 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE----C----CHH
Confidence            57999999999999999988872   42    35555663  33322110    00   011233321    2    145


Q ss_pred             HhcCCCCEEEEcCCCCCCCCCcchhHH--------HHHHHHHHHcCC--CEEEEEcc
Q 022495          131 AIGDDSEAVVCATGFQPGWDLFAPWKA--------INLVEACRKRGV--NRFILISS  177 (296)
Q Consensus       131 ~~~~~~d~vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~~--~~iV~~SS  177 (296)
                      .|++ +|+||.++|....... .....        +.+.++..+...  .+|+.+.|
T Consensus       196 a~~d-aDvvIitag~prk~G~-~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         196 AFKD-AHVIVLLDDFLIKEGE-DLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             HhCC-CCEEEECCCCCCCcCC-CHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            5788 9999999997654322 12111        667777777664  56666664

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14852 hypothetical protein; Provisional

Probab=96.88  E-value=0.012  Score=58.34  Aligned_cols=106  Identities=14%  Similarity=0.132  Sum_probs=69.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcc---hhhh-------------------cccC--CCCCeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD---KAKT-------------------TLSK--DNPSLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~-------------------~~~~--~~~~~~~~  117 (296)
                      .+++.+|+|.|. |++|+.+++.|+..|. ++++++.+.-   ++..                   .+..  ...+++.+
T Consensus       329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            467889999995 9999999999999995 5776665531   1110                   0111  22345556


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ...++  .+.+.+.+++ +|+||.+.-..      .....+.+.+.|.+.++ .+|+.++.+
T Consensus       408 ~~~I~--~en~~~fl~~-~DiVVDa~D~~------~~~~rr~l~~~c~~~~I-P~I~ag~~G  459 (989)
T PRK14852        408 PEGVA--AETIDAFLKD-VDLLVDGIDFF------ALDIRRRLFNRALELGI-PVITAGPLG  459 (989)
T ss_pred             ecCCC--HHHHHHHhhC-CCEEEECCCCc------cHHHHHHHHHHHHHcCC-CEEEeeccc
Confidence            55664  4678888898 99999876321      11122566777888886 677766643

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.88  E-value=0.0077  Score=55.00  Aligned_cols=77  Identities=21%  Similarity=0.273  Sum_probs=50.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCC----CCeEE-----E-EcccCCChHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN----PSLQI-----V-KADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~-----~-~~D~~d~~~~~~~~~~~~~  136 (296)
                      |+|.|+| .|.+|..++..|++.|++|++.++++++...+.....    +++.-     + .+.++- ..+..+++++ +
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~-~~~~~~~~~~-a   77 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRA-TTDYEDAIRD-A   77 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE-ECCHHHHHhh-C
Confidence            4789998 5999999999999999999999999887765432110    00000     0 000111 1223455667 9


Q ss_pred             CEEEEcCCCC
Q 022495          137 EAVVCATGFQ  146 (296)
Q Consensus       137 d~vv~~ag~~  146 (296)
                      |+||-|.+..
T Consensus        78 dvvii~vpt~   87 (411)
T TIGR03026        78 DVIIICVPTP   87 (411)
T ss_pred             CEEEEEeCCC
Confidence            9999888754

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.87  E-value=0.0096  Score=50.41  Aligned_cols=99  Identities=19%  Similarity=0.161  Sum_probs=62.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHH--HhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSE--AIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~~~-~~d~vv~  141 (296)
                      .+.+|+|+|+++ +|..+++.+...|.+|+++++++++.+.... .  +... ..|..+ .+....  ...+ .+|++++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~--g~~~-~~~~~~-~~~~~~~~~~~~~~~d~vi~  207 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE-L--GADH-VIDYKE-EDLEEELRLTGGGGADVVID  207 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-h--CCce-eccCCc-CCHHHHHHHhcCCCCCEEEE
Confidence            567999999988 9999999998899999999988765443321 1  1111 123333 222222  1121 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +++..        .....+++.++..  ++++.++...
T Consensus       208 ~~~~~--------~~~~~~~~~l~~~--G~~v~~~~~~  235 (271)
T cd05188         208 AVGGP--------ETLAQALRLLRPG--GRIVVVGGTS  235 (271)
T ss_pred             CCCCH--------HHHHHHHHhcccC--CEEEEEccCC
Confidence            98732        1124556666554  4888887764

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.87  E-value=0.023  Score=47.92  Aligned_cols=96  Identities=19%  Similarity=0.244  Sum_probs=70.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag  144 (296)
                      +++|+|.||| .=|+.+++.|.++|+.|++..-.....   .  ....+..+.+-+.| .+.+.+.+.+ +++.||...-
T Consensus         2 ~~~IlvlgGT-~egr~la~~L~~~g~~v~~Svat~~g~---~--~~~~~~v~~G~l~~-~~~l~~~l~~~~i~~VIDATH   74 (248)
T PRK08057          2 MPRILLLGGT-SEARALARALAAAGVDIVLSLAGRTGG---P--ADLPGPVRVGGFGG-AEGLAAYLREEGIDLVIDATH   74 (248)
T ss_pred             CceEEEEech-HHHHHHHHHHHhCCCeEEEEEccCCCC---c--ccCCceEEECCCCC-HHHHHHHHHHCCCCEEEECCC
Confidence            5689999986 468999999999999988876665333   1  23567888888878 8899998875 6999998753


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                      .      +...-.+++.++|++.++..+=|
T Consensus        75 P------fA~~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         75 P------YAAQISANAAAACRALGIPYLRL   98 (248)
T ss_pred             c------cHHHHHHHHHHHHHHhCCcEEEE
Confidence            2      11222288889999988765544

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.86  E-value=0.011  Score=52.68  Aligned_cols=96  Identities=23%  Similarity=0.247  Sum_probs=60.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC---cchhhhcccCCCCCeEEEEcccCCChHHH-HHHhcCCCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD---LDKAKTTLSKDNPSLQIVKADVTEGSAKL-SEAIGDDSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-~~~~~~~~d~vv  140 (296)
                      .+.+|+|+|+ |.+|...++.+...|.+|++++|+   +++.....   .-+++++  |..+ .+.. .....+ +|+||
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~---~~Ga~~v--~~~~-~~~~~~~~~~~-~d~vi  243 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE---ELGATYV--NSSK-TPVAEVKLVGE-FDLII  243 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH---HcCCEEe--cCCc-cchhhhhhcCC-CCEEE
Confidence            5789999985 999999998888889999999883   44433221   1234433  4333 2111 112244 99999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .++|..        ......++.++..|  +++.++..
T Consensus       244 d~~g~~--------~~~~~~~~~l~~~G--~~v~~G~~  271 (355)
T cd08230         244 EATGVP--------PLAFEALPALAPNG--VVILFGVP  271 (355)
T ss_pred             ECcCCH--------HHHHHHHHHccCCc--EEEEEecC
Confidence            999732        11234555555554  78877764

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.86  E-value=0.022  Score=47.68  Aligned_cols=101  Identities=15%  Similarity=0.073  Sum_probs=62.7

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcch---hhhc-------------------ccC--CCCCeEEEEcccC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK---AKTT-------------------LSK--DNPSLQIVKADVT  122 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~-------------------~~~--~~~~~~~~~~D~~  122 (296)
                      +|+|.|+ |++|.++++.|+..|. +++++|.+.-.   +...                   +..  ...+++.+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5899984 9999999999999995 67777776321   1110                   000  1234566667775


Q ss_pred             CChHHH-HHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcccee
Q 022495          123 EGSAKL-SEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILV  180 (296)
Q Consensus       123 d~~~~~-~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~  180 (296)
                      + .+.. ...+++ +|+||.+..-        ....+.+-+.+.+.++ .+|..++.+-
T Consensus        80 ~-~~~~~~~f~~~-~DvVi~a~Dn--------~~aR~~ln~~c~~~~i-plI~~g~~G~  127 (234)
T cd01484          80 P-EQDFNDTFFEQ-FHIIVNALDN--------IIARRYVNGMLIFLIV-PLIESGTEGF  127 (234)
T ss_pred             h-hhhchHHHHhC-CCEEEECCCC--------HHHHHHHHHHHHHcCC-CEEEEcccCC
Confidence            4 3322 356777 9999987531        1112456666777774 6777666543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14851 hypothetical protein; Provisional

Probab=96.85  E-value=0.015  Score=56.09  Aligned_cols=103  Identities=14%  Similarity=0.196  Sum_probs=67.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCc---chhhh-------------------ccc--CCCCCeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL---DKAKT-------------------TLS--KDNPSLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~~-------------------~~~--~~~~~~~~~  117 (296)
                      .+++.+|+|.|+ |++|+.+++.|+..|. ++++++.+.   +++..                   .+.  ....+++.+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            456889999995 9999999999999995 566666552   11110                   000  022456667


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILIS  176 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~S  176 (296)
                      ...+++  +.+.+.+++ +|+||.+.-.      ........+.+.|.+.++ .+|+.+
T Consensus       119 ~~~i~~--~n~~~~l~~-~DvVid~~D~------~~~~~r~~l~~~c~~~~i-P~i~~g  167 (679)
T PRK14851        119 PAGINA--DNMDAFLDG-VDVVLDGLDF------FQFEIRRTLFNMAREKGI-PVITAG  167 (679)
T ss_pred             ecCCCh--HHHHHHHhC-CCEEEECCCC------CcHHHHHHHHHHHHHCCC-CEEEee
Confidence            777754  567888898 9999977521      011111457777888876 466554

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.85  E-value=0.011  Score=51.68  Aligned_cols=98  Identities=21%  Similarity=0.212  Sum_probs=60.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccC------CCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           69 IFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSK------DNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      |.|.|+ |++|..++..|+..|  .++++++++++........      ......+..   .+  +  .+.+++ +|+||
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~---~~--~--~~~l~~-aDiVI   71 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR---GG--D--YADAAD-ADIVV   71 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE---CC--C--HHHhCC-CCEEE
Confidence            468886 899999999999988  6799999988765432211      001112221   12  1  235777 99999


Q ss_pred             EcCCCCCCCCCcchhHH--------HHHHHHHHHcCCC-EEEEEc
Q 022495          141 CATGFQPGWDLFAPWKA--------INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~~~-~iV~~S  176 (296)
                      .++|....... .....        +.+.+.+++.+.+ .+|.+|
T Consensus        72 itag~p~~~~~-~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          72 ITAGAPRKPGE-TRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             EcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99997543221 11111        7777777777633 555555

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.83  E-value=0.0095  Score=54.63  Aligned_cols=93  Identities=20%  Similarity=0.190  Sum_probs=61.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+++++|+|. |.||+.+++.|...|.+|++..+++.+......   .++.+     .+    +.+++++ .|+||.
T Consensus       250 ~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~---~G~~~-----~~----leell~~-ADIVI~  315 (476)
T PTZ00075        250 VMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAM---EGYQV-----VT----LEDVVET-ADIFVT  315 (476)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh---cCcee-----cc----HHHHHhc-CCEEEE
Confidence            3578999999995 889999999999999999999888765422111   12222     12    4455677 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +.|...-.   .    ...++.|+...  .+|+++-
T Consensus       316 atGt~~iI---~----~e~~~~MKpGA--iLINvGr  342 (476)
T PTZ00075        316 ATGNKDII---T----LEHMRRMKNNA--IVGNIGH  342 (476)
T ss_pred             CCCccccc---C----HHHHhccCCCc--EEEEcCC
Confidence            87632110   0    34555555443  5777654

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.83  E-value=0.0027  Score=58.37  Aligned_cols=67  Identities=28%  Similarity=0.351  Sum_probs=47.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      |+|+|+||+|.+|..+++.|.+.|++|++.+|+++...+...  ..++.     ..+   ...+.+.+ +|+||.+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~--~~gv~-----~~~---~~~e~~~~-aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK--ELGVE-----YAN---DNIDAAKD-ADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH--HcCCe-----ecc---CHHHHhcc-CCEEEEecC
Confidence            479999999999999999999999999999998766433221  11221     111   13344566 888888764

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.83  E-value=0.017  Score=51.69  Aligned_cols=97  Identities=19%  Similarity=0.174  Sum_probs=62.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+.+|+|.|+ |.+|..+++.+...|.+|++++.+.++..+...  .-+++.+ .|..+ .+.+.+...+ +|+||.+.|
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~--~~Ga~~v-i~~~~-~~~~~~~~~~-~D~vid~~g  256 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN--RLGADSF-LVSTD-PEKMKAAIGT-MDYIIDTVS  256 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH--hCCCcEE-EcCCC-HHHHHhhcCC-CCEEEECCC
Confidence            4789999775 999999999888899999888776654332221  1123222 23344 3455555566 999999987


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ..        ......++.++..  +++|.++.
T Consensus       257 ~~--------~~~~~~~~~l~~~--G~iv~vG~  279 (360)
T PLN02586        257 AV--------HALGPLLGLLKVN--GKLITLGL  279 (360)
T ss_pred             CH--------HHHHHHHHHhcCC--cEEEEeCC
Confidence            31        1123455655554  48888764

>PRK06849 hypothetical protein; Provisional

Probab=96.80  E-value=0.005  Score=55.83  Aligned_cols=78  Identities=8%  Similarity=0.057  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC---hHHHHHHhcC-CCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG---SAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~~~-~~d~vv~  141 (296)
                      +|+|||||++..+|..+++.|.+.|++|++++.++........ .-.....+...-.|+   .+.+.++.+. ++|+||-
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vIP   82 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLIP   82 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence            6899999999999999999999999999999888654322111 011222221112231   2344444443 5899997


Q ss_pred             cCC
Q 022495          142 ATG  144 (296)
Q Consensus       142 ~ag  144 (296)
                      +..
T Consensus        83 ~~e   85 (389)
T PRK06849         83 TCE   85 (389)
T ss_pred             CCh
Confidence            654

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=96.80  E-value=0.0051  Score=55.09  Aligned_cols=67  Identities=18%  Similarity=0.261  Sum_probs=47.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|+|.|.|. |.||+.+++.|..-|.+|++.++....         ..      +... ..++.+++.+ +|+|+.
T Consensus       112 ~~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~---------~~------~~~~-~~~L~ell~~-sDiI~l  173 (378)
T PRK15438        112 FSLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRAD---------RG------DEGD-FRSLDELVQE-ADILTF  173 (378)
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccc---------cc------cccc-cCCHHHHHhh-CCEEEE
Confidence            4578999999995 999999999999999999987653211         00      0011 2346677777 888886


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      .....
T Consensus       174 h~PLt  178 (378)
T PRK15438        174 HTPLF  178 (378)
T ss_pred             eCCCC
Confidence            55443

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.80  E-value=0.015  Score=50.07  Aligned_cols=99  Identities=19%  Similarity=0.174  Sum_probs=60.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~  142 (296)
                      .+.+|+|.|+ |.+|...++.+...|.+ |+++++++++......   -++..+ .|..+..+.+.+...+ .+|++|.+
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~---~Ga~~~-i~~~~~~~~~~~~~~~~g~d~vid~  194 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALS---FGATAL-AEPEVLAERQGGLQNGRGVDVALEF  194 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH---cCCcEe-cCchhhHHHHHHHhCCCCCCEEEEC
Confidence            5789999986 89999999988888986 8877777666543221   122221 1222212233333322 39999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .|..        ......++.++..  ++++.++..
T Consensus       195 ~G~~--------~~~~~~~~~l~~~--G~iv~~G~~  220 (280)
T TIGR03366       195 SGAT--------AAVRACLESLDVG--GTAVLAGSV  220 (280)
T ss_pred             CCCh--------HHHHHHHHHhcCC--CEEEEeccC
Confidence            8731        1123455555544  488888764

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.79  E-value=0.016  Score=51.87  Aligned_cols=99  Identities=14%  Similarity=0.093  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~-~~d~vv  140 (296)
                      .+.+|+|.|+ |.+|..+++.+...|.+ |+++++++++.+....   -+++.+ .|..+  ..+.+.+...+ .+|+||
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~---~Ga~~~-i~~~~~~~~~~i~~~~~~~g~d~vi  250 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE---FGATHT-VNSSGTDPVEAIRALTGGFGADVVI  250 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH---cCCceE-EcCCCcCHHHHHHHHhCCCCCCEEE
Confidence            4789999985 99999999988888985 8888888776554322   122211 23333  02334444432 499999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .+.|..        ......++.++..  +++|.++..
T Consensus       251 d~~g~~--------~~~~~~~~~~~~~--G~iv~~G~~  278 (358)
T TIGR03451       251 DAVGRP--------ETYKQAFYARDLA--GTVVLVGVP  278 (358)
T ss_pred             ECCCCH--------HHHHHHHHHhccC--CEEEEECCC
Confidence            998731        1123455555554  489888753

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.78  E-value=0.006  Score=53.15  Aligned_cols=95  Identities=15%  Similarity=0.128  Sum_probs=63.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|+|.|.| .|.||+.+++.|..-|.+|++.+|+...         .++...       ..++.+++.+ +|+|+.
T Consensus       118 ~~L~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~~~---------~~~~~~-------~~~l~ell~~-aDiv~~  179 (303)
T PRK06436        118 KLLYNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSYVN---------DGISSI-------YMEPEDIMKK-SDFVLI  179 (303)
T ss_pred             CCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcc---------cCcccc-------cCCHHHHHhh-CCEEEE
Confidence            357899999998 5999999999887789999999887432         111100       1236677777 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +............   ...++.|+..  ..||++|...
T Consensus       180 ~lp~t~~T~~li~---~~~l~~mk~g--a~lIN~sRG~  212 (303)
T PRK06436        180 SLPLTDETRGMIN---SKMLSLFRKG--LAIINVARAD  212 (303)
T ss_pred             CCCCCchhhcCcC---HHHHhcCCCC--eEEEECCCcc
Confidence            8765443222111   5566666653  3688777653

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.78  E-value=0.0063  Score=52.96  Aligned_cols=99  Identities=13%  Similarity=0.146  Sum_probs=62.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~-~~d~vv~  141 (296)
                      ++++++|+|++|.+|..+++.+...|.+|+++++++++.+....   .++..+ .|..+.  .+.+.+...+ .+|.+++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~  219 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ---AGADAV-FNYRAEDLADRILAATAGQGVDVIIE  219 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---cCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEE
Confidence            57899999999999999999999999999999998766544321   122221 233331  1233333332 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |+|...         ....++.....  +++|.+++.
T Consensus       220 ~~~~~~---------~~~~~~~l~~~--g~~v~~~~~  245 (325)
T cd08253         220 VLANVN---------LAKDLDVLAPG--GRIVVYGSG  245 (325)
T ss_pred             CCchHH---------HHHHHHhhCCC--CEEEEEeec
Confidence            986311         12223333333  588888764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK07574 formate dehydrogenase; Provisional

Probab=96.77  E-value=0.0031  Score=56.70  Aligned_cols=99  Identities=10%  Similarity=0.127  Sum_probs=63.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|+|.|.|- |.||+.+++.|..-|.+|++.+|.........   ..++       .- ..++.++++. +|+|+.
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~---~~g~-------~~-~~~l~ell~~-aDvV~l  254 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ---ELGL-------TY-HVSFDSLVSV-CDVVTI  254 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh---hcCc-------ee-cCCHHHHhhc-CCEEEE
Confidence            3578999999994 99999999999999999999988753211100   0112       11 2346777888 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +...........   ....+..|++.  .-||++|..
T Consensus       255 ~lPlt~~T~~li---~~~~l~~mk~g--a~lIN~aRG  286 (385)
T PRK07574        255 HCPLHPETEHLF---DADVLSRMKRG--SYLVNTARG  286 (385)
T ss_pred             cCCCCHHHHHHh---CHHHHhcCCCC--cEEEECCCC
Confidence            875433211110   04556666542  267777764

>PRK07877 hypothetical protein; Provisional

Probab=96.76  E-value=0.013  Score=56.79  Aligned_cols=101  Identities=18%  Similarity=0.255  Sum_probs=68.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcc---hhhhc------------------ccC--CCCCeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLD---KAKTT------------------LSK--DNPSLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~---~~~~~------------------~~~--~~~~~~~~  117 (296)
                      .+++.+|+|.|. | +|+.++..|+..|.  ++++++.+.-   ++...                  +..  ...+++.+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            567889999999 7 99999999999994  7888877631   11110                  001  22345666


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ...++  .+.+.+++++ +|+||.|.-         .... ..+.++|.+.++ .+|+-++.
T Consensus       182 ~~~i~--~~n~~~~l~~-~DlVvD~~D---------~~~~R~~ln~~a~~~~i-P~i~~~~~  230 (722)
T PRK07877        182 TDGLT--EDNVDAFLDG-LDVVVEECD---------SLDVKVLLREAARARRI-PVLMATSD  230 (722)
T ss_pred             eccCC--HHHHHHHhcC-CCEEEECCC---------CHHHHHHHHHHHHHcCC-CEEEEcCC
Confidence            66665  4678888888 999999863         1222 445577788875 67777653

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.76  E-value=0.0052  Score=53.21  Aligned_cols=39  Identities=26%  Similarity=0.234  Sum_probs=34.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT  105 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~  105 (296)
                      .++|.|+|+ |.+|..+|..|+..|++|++.+++++..+.
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            358999996 999999999999999999999999887553

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.76  E-value=0.006  Score=54.38  Aligned_cols=100  Identities=15%  Similarity=0.131  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC---ChHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE---GSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~~~~~d~vv~  141 (296)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++++.......  -+++.+ .|..+   ..+.+.+...+.+|+++.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~--lGa~~v-i~~~~~~~~~~~i~~~~~~gvD~v~d  234 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK--LGFDEA-FNYKEEPDLDAALKRYFPEGIDIYFD  234 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh--cCCCEE-EECCCcccHHHHHHHHCCCCcEEEEE
Confidence            468999999999999999988888999999888887665533211  122221 12222   012233322213999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +.|..         .....++.++..  +++|.++..
T Consensus       235 ~vG~~---------~~~~~~~~l~~~--G~iv~~G~~  260 (348)
T PLN03154        235 NVGGD---------MLDAALLNMKIH--GRIAVCGMV  260 (348)
T ss_pred             CCCHH---------HHHHHHHHhccC--CEEEEECcc
Confidence            98721         113455555554  488887654

>PLN02494 adenosylhomocysteinase

Probab=96.75  E-value=0.009  Score=54.68  Aligned_cols=91  Identities=19%  Similarity=0.218  Sum_probs=60.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +.+++++|+|. |.||+.+++.+...|.+|+++.+++.+......   .++.++     +    +.+++.. .|+||.+.
T Consensus       252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~---~G~~vv-----~----leEal~~-ADVVI~tT  317 (477)
T PLN02494        252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALM---EGYQVL-----T----LEDVVSE-ADIFVTTT  317 (477)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHh---cCCeec-----c----HHHHHhh-CCEEEECC
Confidence            57899999995 999999999999999999999988765332211   223321     2    2345666 99999876


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |...-.       ....++.|+..+  .+++++.
T Consensus       318 Gt~~vI-------~~e~L~~MK~GA--iLiNvGr  342 (477)
T PLN02494        318 GNKDII-------MVDHMRKMKNNA--IVCNIGH  342 (477)
T ss_pred             CCccch-------HHHHHhcCCCCC--EEEEcCC
Confidence            632110       033445555433  6887765

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.74  E-value=0.036  Score=45.91  Aligned_cols=105  Identities=24%  Similarity=0.351  Sum_probs=66.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhh----------------------hcccCCCCCeEEEEc-
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK----------------------TTLSKDNPSLQIVKA-  119 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~~~~~-  119 (296)
                      ++..+|+|.|. |++|+..++.|++.|. ++++++-+.-...                      +....-++..++... 
T Consensus        28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~  106 (263)
T COG1179          28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN  106 (263)
T ss_pred             HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence            45679999996 9999999999999995 6777765531110                      111112344444433 


Q ss_pred             ccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccceecc
Q 022495          120 DVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSILVNG  182 (296)
Q Consensus       120 D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~~~~~  182 (296)
                      |.-+ ++.+.+.+...+|.||.+.-         .... ..++..|.++++   -++||+++-+
T Consensus       107 ~f~t-~en~~~~~~~~~DyvIDaiD---------~v~~Kv~Li~~c~~~ki---~vIss~Gag~  157 (263)
T COG1179         107 DFIT-EENLEDLLSKGFDYVIDAID---------SVRAKVALIAYCRRNKI---PVISSMGAGG  157 (263)
T ss_pred             hhhC-HhHHHHHhcCCCCEEEEchh---------hhHHHHHHHHHHHHcCC---CEEeeccccC
Confidence            3334 56777766555899997752         1111 678888999875   4556765533

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.72  E-value=0.0036  Score=50.78  Aligned_cols=67  Identities=21%  Similarity=0.206  Sum_probs=42.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-hhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      |++.|. |+|.||..+++.|.+.|++|++..|+.+ +.........+.       +.  ..+..++.+. .|+||....
T Consensus         2 ~~~~i~-GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-------i~--~~~~~dA~~~-aDVVvLAVP   69 (211)
T COG2085           2 MIIAII-GTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-------IT--GGSNEDAAAL-ADVVVLAVP   69 (211)
T ss_pred             cEEEEe-ccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-------cc--cCChHHHHhc-CCEEEEecc
Confidence            455555 5799999999999999999999866544 333222111122       11  2334555666 899987754

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.72  E-value=0.013  Score=54.64  Aligned_cols=76  Identities=20%  Similarity=0.306  Sum_probs=53.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|+|.| .|+.|.++++.|.+.|++|++.+++.....+..  ...++.++.++-.  .+    .+.+ +|.||..
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l--~~~gi~~~~~~~~--~~----~~~~-~d~vV~S   81 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLI--EVTGVADISTAEA--SD----QLDS-FSLVVTS   81 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHH--HhcCcEEEeCCCc--hh----HhcC-CCEEEeC
Confidence            34578999999 599999999999999999999998765443322  1135666554211  11    2356 8999999


Q ss_pred             CCCCCC
Q 022495          143 TGFQPG  148 (296)
Q Consensus       143 ag~~~~  148 (296)
                      .|+...
T Consensus        82 pgi~~~   87 (473)
T PRK00141         82 PGWRPD   87 (473)
T ss_pred             CCCCCC
Confidence            988653

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.72  E-value=0.0072  Score=54.96  Aligned_cols=68  Identities=28%  Similarity=0.257  Sum_probs=50.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|+|+|. |.||+.+++.|...|.+|++.++++.+......   .++.     +.+    +.+++++ +|+||.+
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~---~G~~-----v~~----l~eal~~-aDVVI~a  274 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM---DGFR-----VMT----MEEAAEL-GDIFVTA  274 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh---cCCE-----ecC----HHHHHhC-CCEEEEC
Confidence            357899999996 999999999999999999999998866432221   1222     222    3445667 9999988


Q ss_pred             CC
Q 022495          143 TG  144 (296)
Q Consensus       143 ag  144 (296)
                      .|
T Consensus       275 TG  276 (425)
T PRK05476        275 TG  276 (425)
T ss_pred             CC
Confidence            76

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.72  E-value=0.013  Score=51.26  Aligned_cols=99  Identities=18%  Similarity=0.141  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~-~~d~vv~  141 (296)
                      .+.+++|.|++|.+|..+++.+...|.+|+++.++.++...+.. .  ++..+. +..+  ..+.+.+...+ .+|+|+.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~--g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d  214 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L--GIGPVV-STEQPGWQDKVREAAGGAPISVALD  214 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c--CCCEEE-cCCCchHHHHHHHHhCCCCCcEEEE
Confidence            46899999999999999999999999999999888766544332 1  222221 2222  02334444442 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +.|...         ....++.++..  ++||.++..
T Consensus       215 ~~g~~~---------~~~~~~~l~~~--g~~v~~g~~  240 (324)
T cd08292         215 SVGGKL---------AGELLSLLGEG--GTLVSFGSM  240 (324)
T ss_pred             CCCChh---------HHHHHHhhcCC--cEEEEEecC
Confidence            987311         13445555444  488887653

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.71  E-value=0.0046  Score=55.66  Aligned_cols=35  Identities=20%  Similarity=0.439  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      ..++|.|+||.|.+|..+++.|.++|++|++.+|+
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            35799999999999999999999999999999885

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.71  E-value=0.0049  Score=48.08  Aligned_cols=69  Identities=29%  Similarity=0.365  Sum_probs=46.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|+++|+| -|.+|+.+|+.|...|.+|++..++|-++-+...   .+++..         .+.+++.. .|++|.+
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~---dGf~v~---------~~~~a~~~-adi~vta   85 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAM---DGFEVM---------TLEEALRD-ADIFVTA   85 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH---TT-EEE----------HHHHTTT--SEEEE-
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh---cCcEec---------CHHHHHhh-CCEEEEC
Confidence            45789999999 5999999999999999999999999865433221   344322         25566777 9999988


Q ss_pred             CCC
Q 022495          143 TGF  145 (296)
Q Consensus       143 ag~  145 (296)
                      .|.
T Consensus        86 TG~   88 (162)
T PF00670_consen   86 TGN   88 (162)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            774

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.71  E-value=0.0062  Score=53.54  Aligned_cols=91  Identities=13%  Similarity=0.070  Sum_probs=62.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|++.|.| .|.||+.+++.|..-|.+|++.+|....         ..+        + ..++.++++. .|+|+.+
T Consensus       145 ~l~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~---------~~~--------~-~~~l~ell~~-sDiv~l~  204 (317)
T PRK06487        145 ELEGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRP---------ARP--------D-RLPLDELLPQ-VDALTLH  204 (317)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCc---------ccc--------c-ccCHHHHHHh-CCEEEEC
Confidence            57899999999 5999999999999889999988775311         111        1 2247778888 9999987


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ............   ...+..|+..  ..||++|=.
T Consensus       205 lPlt~~T~~li~---~~~~~~mk~g--a~lIN~aRG  235 (317)
T PRK06487        205 CPLTEHTRHLIG---ARELALMKPG--ALLINTARG  235 (317)
T ss_pred             CCCChHHhcCcC---HHHHhcCCCC--eEEEECCCc
Confidence            765443222211   5666667643  267777643

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.70  E-value=0.008  Score=54.14  Aligned_cols=68  Identities=21%  Similarity=0.279  Sum_probs=53.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +++|+|.|| |.+|+-++..+.+.|++|++++.++.......     --.++.+|..| .+.+.++.+. +|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-----ad~~~~~~~~D-~~~l~~~a~~-~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-----ADEVIVADYDD-VAALRELAEQ-CDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-----CceEEecCCCC-HHHHHHHHhc-CCEEEe
Confidence            478999997 89999999999999999999988765422211     12456688999 8999998888 998764

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.70  E-value=0.014  Score=51.10  Aligned_cols=99  Identities=18%  Similarity=0.188  Sum_probs=64.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~-~~d~vv~  141 (296)
                      .+.+++|+|++|.+|..+++.+...|.+|+++++++++...... .  ++..+ .|..+.  .+.+.+...+ .+|.+++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~--g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl~  217 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-L--GADVA-VDYTRPDWPDQVREALGGGGVTVVLD  217 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c--CCCEE-EecCCccHHHHHHHHcCCCCceEEEE
Confidence            36789999999999999999999999999999988776543321 1  22221 233330  2334444432 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +.|...         ....++.+...  +++|.++..
T Consensus       218 ~~g~~~---------~~~~~~~l~~~--g~~v~~g~~  243 (324)
T cd08244         218 GVGGAI---------GRAALALLAPG--GRFLTYGWA  243 (324)
T ss_pred             CCChHh---------HHHHHHHhccC--cEEEEEecC
Confidence            987311         13455555554  488888764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.69  E-value=0.0063  Score=52.83  Aligned_cols=99  Identities=15%  Similarity=0.192  Sum_probs=62.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~-~~d~vv~  141 (296)
                      ++.+++|+|++|.+|..+++.+...|.+|++++++.++...... .  ++.. ..|..+  ..+.+.+...+ .+|.+++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~--g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-L--GADV-AINYRTEDFAEEVKEATGGRGVDVILD  214 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-c--CCCE-EEeCCchhHHHHHHHHhCCCCeEEEEE
Confidence            46899999999999999999999999999999888765543321 1  1111 122222  01233333332 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ++|...         ....++.+...  ++++.++..
T Consensus       215 ~~g~~~---------~~~~~~~~~~~--g~~i~~~~~  240 (323)
T cd05276         215 MVGGDY---------LARNLRALAPD--GRLVLIGLL  240 (323)
T ss_pred             CCchHH---------HHHHHHhhccC--CEEEEEecC
Confidence            987311         12344444443  478877654

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.69  E-value=0.0049  Score=53.57  Aligned_cols=73  Identities=25%  Similarity=0.299  Sum_probs=52.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC-----hHHHHHHhcCCCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-----SAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-----~~~~~~~~~~~~d~vv~  141 (296)
                      ++|.|.|+ |--|.+|++.|.+.|++|+++.|+++-..+... .+.+..|.. ++.-|     ..++.+++++ .|+|+.
T Consensus         2 ~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~-~~~N~~yLp-~i~lp~~l~at~Dl~~a~~~-ad~iv~   77 (329)
T COG0240           2 MKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINE-TRENPKYLP-GILLPPNLKATTDLAEALDG-ADIIVI   77 (329)
T ss_pred             ceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHh-cCcCccccC-CccCCcccccccCHHHHHhc-CCEEEE
Confidence            68999996 999999999999999999999999887766543 234445544 33221     2346667776 777776


Q ss_pred             cC
Q 022495          142 AT  143 (296)
Q Consensus       142 ~a  143 (296)
                      ..
T Consensus        78 av   79 (329)
T COG0240          78 AV   79 (329)
T ss_pred             EC
Confidence            54

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.69  E-value=0.014  Score=54.17  Aligned_cols=79  Identities=16%  Similarity=0.207  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCC----CCCeEEE----Ec-ccCCChHHHHHHhcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKD----NPSLQIV----KA-DVTEGSAKLSEAIGD  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~----~~~~~~~----~~-D~~d~~~~~~~~~~~  134 (296)
                      +|+|.|.| .|++|..++..|++.|  ++|++++.++++...+..+.    .+++.-+    .+ .++- ...+.+++.+
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~-t~~~~~~i~~   78 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFF-STDVEKHVAE   78 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEE-EcCHHHHHhc
Confidence            46899997 6999999999999985  78999999998877654311    0111000    00 0100 1223445666


Q ss_pred             CCCEEEEcCCCCC
Q 022495          135 DSEAVVCATGFQP  147 (296)
Q Consensus       135 ~~d~vv~~ag~~~  147 (296)
                       +|++|-|.+.+.
T Consensus        79 -advi~I~V~TP~   90 (473)
T PLN02353         79 -ADIVFVSVNTPT   90 (473)
T ss_pred             -CCEEEEEeCCCC
Confidence             999999988654

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.69  E-value=0.0053  Score=53.00  Aligned_cols=39  Identities=21%  Similarity=0.180  Sum_probs=35.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      .++.||+|.|+|.+|.+|+.++..|+++|++|++..+..
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t  193 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS  193 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence            467899999999999999999999999999999986653

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.68  E-value=0.018  Score=50.47  Aligned_cols=98  Identities=20%  Similarity=0.162  Sum_probs=62.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC-hHHHHHHhcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~d~vv~~ag  144 (296)
                      +.+|+|.|++|.+|..+++.+...|.+|+++++++++.+....   -++..+ .|..+. .+.+.+.-.+.+|+++.+.|
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g  222 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK---LGAKEV-IPREELQEESIKPLEKQRWAGAVDPVG  222 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH---cCCCEE-EcchhHHHHHHHhhccCCcCEEEECCc
Confidence            5799999999999999999999999999999998876554321   122221 222220 22233321114999999886


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ..         .....++.++..|  ++|.++..
T Consensus       223 ~~---------~~~~~~~~l~~~G--~~i~~g~~  245 (326)
T cd08289         223 GK---------TLAYLLSTLQYGG--SVAVSGLT  245 (326)
T ss_pred             HH---------HHHHHHHHhhcCC--EEEEEeec
Confidence            21         1134555555554  88888754

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.67  E-value=0.029  Score=41.51  Aligned_cols=85  Identities=26%  Similarity=0.323  Sum_probs=50.5

Q ss_pred             CeEEEEcCC---chHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGAT---GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |+|.|.|++   +..|..+.+.|.++|++|+.+.-..+..        .+...        ..++.+ ..+++|.++.+.
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i--------~G~~~--------y~sl~e-~p~~iDlavv~~   63 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEI--------LGIKC--------YPSLAE-IPEPIDLAVVCV   63 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEE--------TTEE---------BSSGGG-CSST-SEEEE-S
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEE--------CcEEe--------eccccC-CCCCCCEEEEEc
Confidence            579999988   7789999999999999999764433221        12221        122333 222499888775


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      .         ......+++.+.+.|++.+++.++
T Consensus        64 ~---------~~~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   64 P---------PDKVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             ----------HHHHHHHHHHHHHHT-SEEEE-TT
T ss_pred             C---------HHHHHHHHHHHHHcCCCEEEEEcc
Confidence            3         223366788888889999998887

>PRK06932 glycerate dehydrogenase; Provisional

Probab=96.66  E-value=0.0064  Score=53.35  Aligned_cols=92  Identities=12%  Similarity=0.057  Sum_probs=61.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|++.|.| .|.||+.+++.|..-|.+|++.+|....          ..     +. . ..++.+++.+ +|+|+.+
T Consensus       144 ~l~gktvgIiG-~G~IG~~va~~l~~fg~~V~~~~~~~~~----------~~-----~~-~-~~~l~ell~~-sDiv~l~  204 (314)
T PRK06932        144 DVRGSTLGVFG-KGCLGTEVGRLAQALGMKVLYAEHKGAS----------VC-----RE-G-YTPFEEVLKQ-ADIVTLH  204 (314)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCccc----------cc-----cc-c-cCCHHHHHHh-CCEEEEc
Confidence            57899999999 5999999999998889999887654211          00     00 1 2347788888 9999977


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ............   ...++.|+...  .||++|=.
T Consensus       205 ~Plt~~T~~li~---~~~l~~mk~ga--~lIN~aRG  235 (314)
T PRK06932        205 CPLTETTQNLIN---AETLALMKPTA--FLINTGRG  235 (314)
T ss_pred             CCCChHHhcccC---HHHHHhCCCCe--EEEECCCc
Confidence            764433221111   56666666432  67777643

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.66  E-value=0.028  Score=50.67  Aligned_cols=97  Identities=19%  Similarity=0.243  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+.+++|.|+ |.+|..+++.+...|.+|++++++.++..+...  .-+++.+ .|..+ .+.+.+...+ +|+||.+.|
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~--~lGa~~~-i~~~~-~~~v~~~~~~-~D~vid~~G  251 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID--RLGADSF-LVTTD-SQKMKEAVGT-MDFIIDTVS  251 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH--hCCCcEE-EcCcC-HHHHHHhhCC-CcEEEECCC
Confidence            4789999986 999999999888899999988877544222221  1223222 23444 4455555566 999999987


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ...        .....++.++..  +++|.++.
T Consensus       252 ~~~--------~~~~~~~~l~~~--G~iv~vG~  274 (375)
T PLN02178        252 AEH--------ALLPLFSLLKVS--GKLVALGL  274 (375)
T ss_pred             cHH--------HHHHHHHhhcCC--CEEEEEcc
Confidence            321        113455555544  48888864

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=96.65  E-value=0.008  Score=53.99  Aligned_cols=67  Identities=21%  Similarity=0.286  Sum_probs=47.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|+|.|.|. |.||+.+++.|...|.+|++.++.....       ...        .. ..++.+++.+ +|+|+.
T Consensus       112 ~~l~gktvGIIG~-G~IG~~va~~l~a~G~~V~~~Dp~~~~~-------~~~--------~~-~~~l~ell~~-aDiV~l  173 (381)
T PRK00257        112 VDLAERTYGVVGA-GHVGGRLVRVLRGLGWKVLVCDPPRQEA-------EGD--------GD-FVSLERILEE-CDVISL  173 (381)
T ss_pred             CCcCcCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCccccc-------ccC--------cc-ccCHHHHHhh-CCEEEE
Confidence            3578999999995 9999999999999999999887643211       001        11 2236667777 888886


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +....
T Consensus       174 h~Plt  178 (381)
T PRK00257        174 HTPLT  178 (381)
T ss_pred             eCcCC
Confidence            66543

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.65  E-value=0.025  Score=50.29  Aligned_cols=99  Identities=19%  Similarity=0.167  Sum_probs=54.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCC-----Ce--EEEEcccCCChHHHHHHhcCCCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNP-----SL--QIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-----~~--~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      ++|.|+|++|++|+++++.|.++. .+|+.+.++............+     +.  .+....+.+ .+.  ..+.+ +|+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~-~Dv   76 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVE-PEP--VASKD-VDI   76 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEe-CCH--HHhcc-CCE
Confidence            479999999999999999998876 5887774443222111110000     00  001111111 110  13466 999


Q ss_pred             EEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          139 VVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      |+.+.+..         ....+.+.+.+.|+ ++|..|+..
T Consensus        77 Vf~a~p~~---------~s~~~~~~~~~~G~-~VIDlsg~f  107 (341)
T TIGR00978        77 VFSALPSE---------VAEEVEPKLAEAGK-PVFSNASNH  107 (341)
T ss_pred             EEEeCCHH---------HHHHHHHHHHHCCC-EEEECChhh
Confidence            99887421         11345566777776 566666653

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.64  E-value=0.024  Score=50.12  Aligned_cols=99  Identities=17%  Similarity=0.217  Sum_probs=62.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcchhhhcccCCCCCeEEEEcccCCC-hHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~-~~d~vv~  141 (296)
                      .+.+|+|+|+ |.+|..+++.+...|.+ |+++++++++......   -++..+ .|..+. .+.+.+...+ .+|++|.
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~---~ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid  237 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKA---LGADFV-INSGQDDVQEIRELTSGAGADVAIE  237 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH---hCCCEE-EcCCcchHHHHHHHhCCCCCCEEEE
Confidence            4789999986 99999999998889988 9988888776543221   122221 233330 2234444432 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +.|...        .....++.++..|  +++.++..
T Consensus       238 ~~g~~~--------~~~~~~~~l~~~G--~~v~~g~~  264 (339)
T cd08239         238 CSGNTA--------ARRLALEAVRPWG--RLVLVGEG  264 (339)
T ss_pred             CCCCHH--------HHHHHHHHhhcCC--EEEEEcCC
Confidence            987321        1133455555554  88887753

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.64  E-value=0.01  Score=53.87  Aligned_cols=92  Identities=21%  Similarity=0.172  Sum_probs=61.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|+|+|+ |.||+.+++.+...|.+|++.++++.+......   .++..+     + .   .+++.+ +|+||.+
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~---~G~~~~-----~-~---~e~v~~-aDVVI~a  264 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAM---EGYEVM-----T-M---EEAVKE-GDIFVTT  264 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh---cCCEEc-----c-H---HHHHcC-CCEEEEC
Confidence            357899999996 999999999999999999999998876543321   233222     2 2   245567 9999998


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +|...       .-....++.++..  +.+++++.
T Consensus       265 tG~~~-------~i~~~~l~~mk~G--gilvnvG~  290 (413)
T cd00401         265 TGNKD-------IITGEHFEQMKDG--AIVCNIGH  290 (413)
T ss_pred             CCCHH-------HHHHHHHhcCCCC--cEEEEeCC
Confidence            87321       0002334444443  37888873

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.63  E-value=0.0049  Score=54.43  Aligned_cols=66  Identities=21%  Similarity=0.198  Sum_probs=49.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|+|.|+| .|.||+.+++.|...|.+|++.+|++.....       .+.     .   ..++.+++++ +|+|+.+
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~-------~~~-----~---~~~l~ell~~-aDiVil~  205 (330)
T PRK12480        143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD-------FLT-----Y---KDSVKEAIKD-ADIISLH  205 (330)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh-------hhh-----c---cCCHHHHHhc-CCEEEEe
Confidence            56789999998 5999999999999999999999988653211       010     1   2236677888 9999977


Q ss_pred             CCC
Q 022495          143 TGF  145 (296)
Q Consensus       143 ag~  145 (296)
                      ...
T Consensus       206 lP~  208 (330)
T PRK12480        206 VPA  208 (330)
T ss_pred             CCC
Confidence            653

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.63  E-value=0.017  Score=52.27  Aligned_cols=39  Identities=21%  Similarity=0.036  Sum_probs=32.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL  107 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~  107 (296)
                      |+|.|.| .|++|..++..|+ .|++|++.++++++...+.
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~   39 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLN   39 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHH
Confidence            4689997 6999999996665 5999999999998877654

>PLN02306 hydroxypyruvate reductase

Probab=96.63  E-value=0.0081  Score=54.11  Aligned_cols=107  Identities=8%  Similarity=0.039  Sum_probs=63.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHH-HCCCeEEEEEcCcchhhhc-ccCCCCCeE---EEEcccCCChHHHHHHhcCCCC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLL-AKGFAVKAGVRDLDKAKTT-LSKDNPSLQ---IVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~-~~~~~~~~~---~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      .+.++++.|.| .|.||+.+++.|. .-|.+|++.++........ .........   ....++.. ..++.+++.+ +|
T Consensus       162 ~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~L~ell~~-sD  238 (386)
T PLN02306        162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKR-ASSMEEVLRE-AD  238 (386)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccc-cCCHHHHHhh-CC
Confidence            57899999999 6999999999986 6799999988765321110 000000000   00011122 2357888888 99


Q ss_pred             EEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          138 AVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +|+.++...........   ...++.|+..  ..||+++=
T Consensus       239 iV~lh~Plt~~T~~lin---~~~l~~MK~g--a~lIN~aR  273 (386)
T PLN02306        239 VISLHPVLDKTTYHLIN---KERLALMKKE--AVLVNASR  273 (386)
T ss_pred             EEEEeCCCChhhhhhcC---HHHHHhCCCC--eEEEECCC
Confidence            99876654332211111   5666767653  26777763

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=96.62  E-value=0.036  Score=45.86  Aligned_cols=89  Identities=18%  Similarity=0.203  Sum_probs=61.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ..+++++|||+|| |-++..=++.|++.|++|++++-.... ..++.  ...++++++-++.. . .    +.+ ++.||
T Consensus        21 l~~~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~--~~~~i~~~~r~~~~-~-d----l~g-~~LVi   90 (223)
T PRK05562         21 LLSNKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK--KYGNLKLIKGNYDK-E-F----IKD-KHLIV   90 (223)
T ss_pred             EECCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH--hCCCEEEEeCCCCh-H-H----hCC-CcEEE
Confidence            4567899999997 999999999999999999988765432 22222  23568888876653 2 2    356 77777


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcC
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRG  168 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~  168 (296)
                      .+..        +......+.+.|++.+
T Consensus        91 aATd--------D~~vN~~I~~~a~~~~  110 (223)
T PRK05562         91 IATD--------DEKLNNKIRKHCDRLY  110 (223)
T ss_pred             ECCC--------CHHHHHHHHHHHHHcC
Confidence            6653        2222266777777765

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.62  E-value=0.011  Score=47.55  Aligned_cols=81  Identities=16%  Similarity=0.125  Sum_probs=53.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .+++||+|+|.|-+.-+|+.++..|+++|+.|++.+.+.-...   . .......-.....|....+.+.+++ .|+||.
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~---~-~~~~~~hs~t~~~~~~~~l~~~~~~-ADIVIs  132 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVF---T-RGESIRHEKHHVTDEEAMTLDCLSQ-SDVVIT  132 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccc---c-cccccccccccccchhhHHHHHhhh-CCEEEE
Confidence            3678999999999999999999999999999998865432110   0 0000000011111212236677787 999999


Q ss_pred             cCCCCC
Q 022495          142 ATGFQP  147 (296)
Q Consensus       142 ~ag~~~  147 (296)
                      .+|...
T Consensus       133 AvG~~~  138 (197)
T cd01079         133 GVPSPN  138 (197)
T ss_pred             ccCCCC
Confidence            988543

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.61  E-value=0.024  Score=50.99  Aligned_cols=99  Identities=16%  Similarity=0.108  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~d~vv~  141 (296)
                      .+.+|+|+|+ |.+|..+++.+...|. +|+++++++++......   -+++.+ .|..+  ..+.+.+...+.+|++|.
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~---~Ga~~~-i~~~~~~~~~~i~~~~~~g~d~vid  265 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARE---LGATAT-VNAGDPNAVEQVRELTGGGVDYAFE  265 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH---cCCceE-eCCCchhHHHHHHHHhCCCCCEEEE
Confidence            4679999985 9999999988888898 68888888776553321   122211 23333  022333333223999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +.|..        ......++.++..|  ++|.++..
T Consensus       266 ~~G~~--------~~~~~~~~~l~~~G--~iv~~G~~  292 (371)
T cd08281         266 MAGSV--------PALETAYEITRRGG--TTVTAGLP  292 (371)
T ss_pred             CCCCh--------HHHHHHHHHHhcCC--EEEEEccC
Confidence            98732        11244556666544  88887653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.59  E-value=0.027  Score=48.55  Aligned_cols=103  Identities=17%  Similarity=0.313  Sum_probs=63.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhc----------------------ccCCCCC--eEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LSKDNPS--LQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~--~~~~  117 (296)
                      .++..+|||.|+ |++|.++++.|+..|. +|++.|.+.-....+                      +...++.  ++.+
T Consensus        16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            345789999996 9999999999999995 577776653221110                      1111233  3333


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceecc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNG  182 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~  182 (296)
                      ..++ +     .+.+.+ .|+||.+..        .......+-++|++.++ .+|...+.+.+|
T Consensus        95 ~~~~-~-----~~~l~~-fdvVV~~~~--------~~~~~~~in~~c~~~~i-pfI~a~~~G~~G  143 (286)
T cd01491          95 TGPL-T-----TDELLK-FQVVVLTDA--------SLEDQLKINEFCHSPGI-KFISADTRGLFG  143 (286)
T ss_pred             eccC-C-----HHHHhc-CCEEEEecC--------CHHHHHHHHHHHHHcCC-EEEEEeccccEE
Confidence            3332 2     234566 898887752        11122567778888875 788888776554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.59  E-value=0.0049  Score=53.43  Aligned_cols=38  Identities=24%  Similarity=0.365  Sum_probs=34.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT  105 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~  105 (296)
                      ++|.|+|+ |.+|..++..|+++|++|++.+++++....
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   39 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLES   39 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            57999996 999999999999999999999999876654

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.59  E-value=0.0051  Score=54.19  Aligned_cols=40  Identities=35%  Similarity=0.370  Sum_probs=34.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT  106 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~  106 (296)
                      ||+|.|.|+ |.+|..++..|++.|++|++++|+++..+.+
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~   40 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEI   40 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            368999995 9999999999999999999999987665543

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.58  E-value=0.017  Score=51.06  Aligned_cols=94  Identities=20%  Similarity=0.212  Sum_probs=55.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHH-CCCe---EEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLA-KGFA---VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++|.|.||||++|..+++.|.+ ....   +..+....+. .+........+.+...   | .+    .+.+ +|++|.
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~sa-Gk~~~~~~~~l~v~~~---~-~~----~~~~-~Divf~   74 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSA-GKTVQFKGREIIIQEA---K-IN----SFEG-VDIAFF   74 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccC-CCCeeeCCcceEEEeC---C-HH----HhcC-CCEEEE
Confidence            46899999999999999999995 5666   5555433221 1111101112222222   3 22    2456 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +++..         ....+.+.+.+.|+ .+|=.||..
T Consensus        75 a~~~~---------~s~~~~~~~~~~G~-~VID~Ss~f  102 (347)
T PRK06728         75 SAGGE---------VSRQFVNQAVSSGA-IVIDNTSEY  102 (347)
T ss_pred             CCChH---------HHHHHHHHHHHCCC-EEEECchhh
Confidence            87521         11556676767774 566666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	296
3e8x_A	236	Putative Nad-Dependent EpimeraseDEHYDRATASE FROM BA		1e-14
1xq6_A	253	X-ray Structure Of Gene Product From Arabidopsis Th		5e-09
3dqp_A	219	Crystal Structure Of The Oxidoreductase Ylbe From L		1e-07
3dhn_A	227	Crystal Structure Of The Putative Epimerase Q89z24_		8e-07
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		2e-06
1hdo_A	206	Human Biliverdin Ix Beta Reductase: Nadp Complex Le		1e-04

>pdb|3E8X|A Chain A, Putative Nad-Dependent EpimeraseDEHYDRATASE FROM BACILLUS HALODURANS Length = 236

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 20/223 (8%)
Query: 60  ENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKA 119
           EN+  +  ++ V GA G   + ++ +L  KG    A VR+ ++      ++  +  IV A
Sbjct: 15  ENLYFQGXRVLVVGANGKVARYLLSELKNKGHEPVAXVRNEEQGPEL--RERGASDIVVA 72
Query: 120 DVTEGSAKLSEAIGDDSEAVVCATGFQP--GWD---LFAPWKAINLVEACRKRGVNRFIL 174
           ++ E  +    +I    +AVV A G  P  G D   L   W AI  ++   KRG+ RFI 
Sbjct: 73  NLEEDFSHAFASI----DAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIX 128
Query: 175 ISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPT 234
           +SS+       G      Y         L+AK  A+  +++S ++YTI+RPG L NE  T
Sbjct: 129 VSSVGTVDPDQGPXNXRHY---------LVAKRLADDELKRSSLDYTIVRPGPLSNEEST 179
Query: 235 GNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS 277
           G + +    +    +I+R  VA+V  E +    +  K  E+++
Sbjct: 180 GKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222

>pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 18/147 (12%)
Query: 159 NLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL--TLIAKLQAEQYIRKS 216
           N ++A +  GV   +++ S       MG   NP +  LN  G    L+ K +AEQY+  S
Sbjct: 115 NQIDAAKVAGVKHIVVVGS-------MGGT-NPDHP-LNKLGNGNILVWKRKAEQYLADS 165
Query: 217 GINYTIIRPGGLRN-EPPTGNIIMETEDTLYE---GTISRDQVAEVAVEALLHPESSYKV 272
           G  YTIIR GGL + E     +++  +D L +    T+ R  VAEV ++ALL  E+  K 
Sbjct: 166 GTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKA 225
Query: 273 VEIISRVDA---PKRSYEDLFGSIKQR 296
            ++ S+ +    P + ++ LF  +  R
Sbjct: 226 FDLGSKPEGTSTPTKDFKALFSQVTSR 252

>pdb|3DQP|A Chain A, Crystal Structure Of The Oxidoreductase Ylbe From Lactococcus Lactis, Northeast Structural Genomics Consortium Target Kr121 Length = 219

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 29/185 (15%)
Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKA---DVTEG 124
           KIF+ G+TG  GK +++ L    + + AG R +++         P    VKA   DV   
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV--------PQYNNVKAVHFDVDWT 53
Query: 125 SAKLSEAI-GDDSEAVVCATGFQP--GWDLFAPWKAINLVEACRKRGVNRFILISSILVN 181
             + ++ + G D+   V  +G +     DL+    A+ L +A  K  V RFIL+S+I   
Sbjct: 54  PEEXAKQLHGXDAIINVSGSGGKSLLKVDLYG---AVKLXQAAEKAEVKRFILLSTIFS- 109
Query: 182 GAAMGQILNPAYIF---LNVFGLTLIAKLQAEQYIRK-SGINYTIIRPGGLRNEPPTGNI 237
                  L P        +      IAK  A+ Y+ K + ++YTII+PG L  E  TG I
Sbjct: 110 -------LQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEATGLI 162
Query: 238 IMETE 242
            +  E
Sbjct: 163 DINDE 167

>pdb|3DHN|A Chain A, Crystal Structure Of The Putative Epimerase Q89z24_bactn From Bacteroides Thetaiotaomicron. Northeast Structural Genomics Consortium Target Btr310 Length = 227

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
           K KKI + GA+G  G  ++ + L +GF V A VR  +K K     +N  L++ KADV+  
Sbjct: 3   KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI----ENEHLKVKKADVSSL 58
Query: 125 SAKLSEAIGDDSEAVVCATGFQPGW---DLFAPWKAINL--VEACRKRGVNRFILISS 177
                   G D  AV+ A  F PGW   D++     + L  ++  +K GVNRF+ +  
Sbjct: 59  DEVCEVCKGAD--AVISA--FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLXVGG 112

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           KK+F+ G  G  G  I E LL +G  V  G+ +    +    KD+P+L  V+  + +  A
Sbjct: 22  KKVFITGICGQIGSHIAELLLERGDKV-VGIDNFATGRREHLKDHPNLTFVEGSIAD-HA 79
Query: 127 KLSEAIGD-DSEAVV-CATGFQPGWDLFAPW-----KAINLVEACRKRGVNRFILISSIL 179
            +++ IGD   +AVV  A  ++   D +           N+V+A +K  V RF+   + L
Sbjct: 80  LVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTAL 139
Query: 180 VNGAA-------MGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIR 224
             G         +    NPA           I+K   E Y+  SG+++   R
Sbjct: 140 CYGVKPIQQPVRLDHPRNPAN------SSYAISKSANEDYLEYSGLDFVTFR 185

>pdb|1HDO|A Chain A, Human Biliverdin Ix Beta Reductase: Nadp Complex Length = 206

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 13/170 (7%)
Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNP-SLQIVKADVTEGS 125
           KKI + GATG +G   + Q +  G+ V   VRD     + L  + P    +V  DV + +
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD----SSRLPSEGPRPAHVVVGDVLQAA 59
Query: 126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAM 185
                  G D+  V+  T             A N+V A +  GV++ +  +S  +     
Sbjct: 60  DVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL----- 114
Query: 186 GQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTG 235
             + +P  +   +  +T    ++  + +R+SG+ Y  + P  + ++P TG
Sbjct: 115 --LWDPTKVPPRLQAVT-DDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG 161

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	296
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	5e-64
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	7e-60
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-56
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	6e-53
1xq6_A	253	Unknown protein; structural genomics, protein stru	8e-51
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	8e-43
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	4e-39
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-31
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	4e-29
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	7e-24
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	3e-23
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	8e-23
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-21
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-21
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-21
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-20
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	5e-20
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	9e-20
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	1e-19
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	5e-19
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	5e-18
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	9e-17
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	5e-14
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-13
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-12
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-11
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	5e-11
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-10
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-10
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	7e-10
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	2e-09
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	6e-09
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	7e-09
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	2e-07
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-07
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	6e-07
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-06
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	7e-06
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	4e-05
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	4e-05
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	6e-05
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	9e-05
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-04
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-04
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-04
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	2e-04
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	2e-04
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-04
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-04
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-04
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-04
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	3e-04
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	5e-04
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	7e-04
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	7e-04
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	9e-04

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  200 bits (510), Expect = 5e-64
 Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 20/227 (8%)

Query: 56  EEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQ 115
               EN+  +  ++ V GA G   + ++ +L  KG    A VR+ ++      ++  +  
Sbjct: 11  SSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL--RERGASD 68

Query: 116 IVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWK-----AINLVEACRKRGVN 170
           IV A++ E     S A     +AVV A G  P              AI  ++   KRG+ 
Sbjct: 69  IVVANLEE---DFSHAF-ASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIK 124

Query: 171 RFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRN 230
           RFI++SS+       G +    Y         L+AK  A+  +++S ++YTI+RPG L N
Sbjct: 125 RFIMVSSVGTVDPDQGPMNMRHY---------LVAKRLADDELKRSSLDYTIVRPGPLSN 175

Query: 231 EPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS 277
           E  TG + +    +    +I+R  VA+V  E +    +  K  E+++
Sbjct: 176 EESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  189 bits (481), Expect = 7e-60
 Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 22/228 (9%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           KIF+ G+TG  GK +++ L    + + AG R +++          +++ V  DV     +
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV-----PQYNNVKAVHFDVDWTPEE 56

Query: 128 LSEAIGDDSEAVVCATGFQPGW----DLFAPWKAINLVEACRKRGVNRFILISSILVNGA 183
           +++ +    +A++  +G         DL+    A+ L++A  K  V RFIL+S+I     
Sbjct: 57  MAKQL-HGMDAIINVSGSGGKSLLKVDLYG---AVKLMQAAEKAEVKRFILLSTIFSLQP 112

Query: 184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-SGINYTIIRPGGLRNEPPTGNIIMETE 242
                        +      IAK  A+ Y+ K + ++YTII+PG L  E  TG I +  E
Sbjct: 113 E-----KWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEATGLIDINDE 167

Query: 243 DTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLF 290
            +    + +   VA+   E ++   S  KV+ + +   A K + E L 
Sbjct: 168 VS---ASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALESLL 212

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  180 bits (459), Expect = 1e-56
 Identities = 42/208 (20%), Positives = 80/208 (38%), Gaps = 21/208 (10%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
             KKI + GATG +G   + Q +  G+ V   VRD  +  +          +V  DV + 
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP---RPAHVVVGDVLQ- 57

Query: 125 SAKLSEAIGDDSEAVVCATGFQPGWDLFAPWK-----AINLVEACRKRGVNRFILISSIL 179
           +A + + +    +AV+   G +       P       A N+V A +  GV++ +  +S  
Sbjct: 58  AADVDKTV-AGQDAVIVLLGTRNDLS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAF 113

Query: 180 VNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIM 239
           +        L                 ++  + +R+SG+ Y  + P  + ++P TG   +
Sbjct: 114 L--------LWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTV 165

Query: 240 ETEDTLYEGTISRDQVAEVAVEALLHPE 267
             +       IS+  +    +  L   E
Sbjct: 166 TLDGRGPSRVISKHDLGHFMLRCLTTDE 193

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score =  171 bits (436), Expect = 6e-53
 Identities = 48/236 (20%), Positives = 81/236 (34%), Gaps = 20/236 (8%)

Query: 49  MGKSEITEEAEENVSV-----KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDK 102
           MG S                   K + + GA G   + ++ QL  K         R   K
Sbjct: 1   MGSSHHHHHHSSGRENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK 60

Query: 103 AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVE 162
                  +    QI+  DV    A L +A+    + V      +         +A +++ 
Sbjct: 61  IHKPYPTN---SQIIMGDVLN-HAALKQAM-QGQDIVYANLTGED-----LDIQANSVIA 110

Query: 163 ACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTI 222
           A +   V R I + S+ +     G+ +        V G  L    +A   I  SG+ YTI
Sbjct: 111 AMKACDVKRLIFVLSLGIYDEVPGKFVEWNN---AVIGEPLKPFRRAADAIEASGLEYTI 167

Query: 223 IRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPES-SYKVVEIIS 277
           +RP  L +E      +    +      +SR  VA +  + +  PE    + + I  
Sbjct: 168 LRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQ 223

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  166 bits (423), Expect = 8e-51
 Identities = 61/265 (23%), Positives = 103/265 (38%), Gaps = 44/265 (16%)

Query: 63  SVKQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKAD 120
           S     + V GA+G +G+ + ++L      F  K  VR     +           +   D
Sbjct: 1   SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG----GEADVFIGD 56

Query: 121 VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWK----------------------AI 158
           +T+ +  ++ A     +A+V  T   P                                 
Sbjct: 57  ITD-ADSINPAF-QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 114

Query: 159 NLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGI 218
           N ++A +  GV   +++ S+   G      LN         G  L+ K +AEQY+  SG 
Sbjct: 115 NQIDAAKVAGVKHIVVVGSM--GGTNPDHPLNKL-----GNGNILVWKRKAEQYLADSGT 167

Query: 219 NYTIIRPGGLRNEPPTG-NIIMETEDTLY---EGTISRDQVAEVAVEALLHPESSYKVVE 274
            YTIIR GGL ++      +++  +D L      T+ R  VAEV ++ALL  E+  K  +
Sbjct: 168 PYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFD 227

Query: 275 IISRVDAPKRSYED---LFGSIKQR 296
           + S+ +      +D   LF  +  R
Sbjct: 228 LGSKPEGTSTPTKDFKALFSQVTSR 252

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score =  145 bits (367), Expect = 8e-43
 Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 13/211 (6%)

Query: 68  KIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            I + GA G   + +   LL      +    R L         D+  + +++        
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN-PG 65

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
            L +A+  ++E V                   ++V+A  +  + R I +S   ++G    
Sbjct: 66  XLEQAV-TNAEVVFVGAMESGSD-------MASIVKALSRXNIRRVIGVSMAGLSGEFPV 117

Query: 187 QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNI-IMETEDTL 245
            +    + F N+    +  + QA   +R+S +NYTI+R   L N+P   +  ++      
Sbjct: 118 AL--EKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYELIPEGAQF 175

Query: 246 YEGTISRDQVAEVAVEALLHPESSYKVVEII 276
            +  +SR+ V +   + L   + +      I
Sbjct: 176 NDAQVSREAVVKAIFDILHAADETPFHRTSI 206

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  135 bits (343), Expect = 4e-39
 Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 16/221 (7%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
           K KKI + GA+G  G  ++ + L +GF V A VR  +K K     +N  L++ KADV+  
Sbjct: 3   KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK----IENEHLKVKKADVSSL 58

Query: 125 SAKLSEAIGDDSEAVVCATGFQPGW-DLFAPWK--AINLVEACRKRGVNRFILISSILVN 181
              + E     ++AV+ A        D++       + +++  +K GVNRF+++      
Sbjct: 59  DE-VCEVC-KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSL 116

Query: 182 GAAMGQIL--NPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG-LRNEPPTGNII 238
             A G  L  +       + G+  + +      +++  I++    P   +R    TG   
Sbjct: 117 FIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR 176

Query: 239 METEDTLY----EGTISRDQVAEVAVEALLHPESSYKVVEI 275
           +  +D +        IS +  A   ++ L HP+   +   I
Sbjct: 177 LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTI 217

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score =  115 bits (290), Expect = 2e-31
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 17/222 (7%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           KI + GATG +G RI+E+   +G  V A VR+  K   T    +  + I++ D+ + +  
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT----HKDINILQKDIFDLTLS 57

Query: 128 LSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI-LVNGAAMG 186
                  D   VV A G  P           +L+         R +++     +     G
Sbjct: 58  DLS----DQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDG 113

Query: 187 QILNPAYIF---LNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNE-PPTGNIIMETE 242
             L  +               AK        ++  ++T I P  +      TG+  +  +
Sbjct: 114 NTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKD 173

Query: 243 DTLYEG----TISRDQVAEVAVEALLHPESSYKVVEIISRVD 280
             L+       IS +  A   ++ +  P    +   +  +++
Sbjct: 174 HLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLE 215

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score =  109 bits (274), Expect = 4e-29
 Identities = 46/220 (20%), Positives = 78/220 (35%), Gaps = 17/220 (7%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           KI V GATG +G  IV +   +G  V A VRD  KA      D     +           
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA-----ADRLGATVATLVKEPLVLT 56

Query: 128 LSEAIGDDSEAVVCATGFQPG--WDLFAPWKAINLVEACRKRGVNRFILISS--ILVNGA 183
            ++    D  AVV A     G          A +LV   R        ++ S  + + GA
Sbjct: 57  EADLDSVD--AVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGA 114

Query: 184 AMGQILN-PAYIFLNVFGLTLIAKLQAEQYIRK-SGINYTIIRPGGLRNEPPTGNIIMET 241
               IL+ P       +    + +    Q+++  + +N+  I P       P  + +   
Sbjct: 115 DHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATSYVAGK 174

Query: 242 EDTLY----EGTISRDQVAEVAVEALLHPESSYKVVEIIS 277
           +  L     +  I+   +A   ++ L HP +    + +  
Sbjct: 175 DTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRD 214

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 97.7 bits (243), Expect = 7e-24
 Identities = 42/229 (18%), Positives = 84/229 (36%), Gaps = 29/229 (12%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-----DLDKAKTTLSKDNPSLQIVKA 119
           K+ ++ + G TG  GKRIV   ++ G       R     ++DK +  L       ++++A
Sbjct: 3   KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 62

Query: 120 DVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL 179
            + +    L +A+    + V+ A             + + LVEA ++ G  +  L S   
Sbjct: 63  SLDDHQR-LVDAL-KQVDVVISALAGGVLSHHIL--EQLKLVEAIKEAGNIKRFLPSEFG 118

Query: 180 VNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG-------GLRNEP 232
           ++   M   L P  I           K +  + I  + I YT +          G   + 
Sbjct: 119 MDPDIMEHALQPGSITFI-------DKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQL 171

Query: 233 PTGNIIMETEDTLYEG------TISRDQVAEVAVEALLHPESSYKVVEI 275
               +    +  +Y         +  D V    ++++  P++  K + I
Sbjct: 172 DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYI 220

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 96.8 bits (241), Expect = 3e-23
 Identities = 34/233 (14%), Positives = 72/233 (30%), Gaps = 32/233 (13%)

Query: 63  SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT 122
           + ++K I V GATG  G  ++    A G  V+A V  L        +  P++ + +  + 
Sbjct: 2   AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLL 61

Query: 123 EGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNG 182
                +     + +      T  Q G ++       +L +A ++ G  +  + SS  +  
Sbjct: 62  NNVPLMDTLF-EGAHLAFINTTSQAGDEIAI---GKDLADAAKRAGTIQHYIYSS--MPD 115

Query: 183 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG-------------GLR 229
            ++        ++          K   E Y+R+ G+  T +  G                
Sbjct: 116 HSLYGPWPAVPMW--------APKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQM 167

Query: 230 NEPPTGNIIMET---EDTLYEGTISRDQVAEVAVEALLHPESSY--KVVEIIS 277
              P G          D       +   V    ++        +    + +  
Sbjct: 168 ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF 220

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 94.8 bits (236), Expect = 8e-23
 Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 32/218 (14%)

Query: 66  QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
           +K + V G TG+ G  +   LL  G F V+   R+  K      +     ++V+ D  + 
Sbjct: 5   KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL-QGAEVVQGDQDDQ 63

Query: 125 SAKLSEAIGDDSEAVVCATGFQPGWDLFAP----WKAINLVEACRKRGVNRFILISSILV 180
              +  A+ + + A    T     W+  +      +   L +  R+ G++  +      +
Sbjct: 64  VI-MELAL-NGAYATFIVT---NYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENI 118

Query: 181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG-LRNEPPTGNIIM 239
                G++    +            K + E+Y R  G+  T +R      N         
Sbjct: 119 KKLTAGRLAAAHFD----------GKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQK 168

Query: 240 ETEDTLYEGT----------ISRDQVAEVAVEALLHPE 267
             +   Y  +          +S   +  V +  L  PE
Sbjct: 169 APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE 206

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 91.1 bits (226), Expect = 2e-21
 Identities = 39/227 (17%), Positives = 80/227 (35%), Gaps = 34/227 (14%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR------DLDKAKTTLSKDNPSLQIVKAD 120
            +I + GATG  G+ + +  L  G      VR      + +KA+   S       IV   
Sbjct: 5   SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64

Query: 121 VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILV 180
           + +  A L EA+  + + V+   G     +       +N+++A ++ G  +    S    
Sbjct: 65  IDD-HASLVEAV-KNVDVVISTVGS-LQIE-----SQVNIIKAIKEVGTVKRFFPSEFGN 116

Query: 181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG-----LRNEPPTG 235
           +   +  +     +F          K +  + I   GI YT +         LR+    G
Sbjct: 117 DVDNVHAVEPAKSVF--------EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAG 168

Query: 236 NIIMETEDTLYEG-------TISRDQVAEVAVEALLHPESSYKVVEI 275
                 +  +  G        +  + +    ++A+  P +  K + +
Sbjct: 169 LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYL 215

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 90.4 bits (225), Expect = 2e-21
 Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 30/217 (13%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            I + GATG  G  I  Q +A        GVR+++K           + + + D      
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGK---VSVRQLDYFN-QE 57

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
            + EA     + VV             P    NLV A ++ GV   I I           
Sbjct: 58  SMVEAF-KGMDTVVFIPSIIHPSFKRIPE-VENLVYAAKQSGVAHIIFIGYY---ADQHN 112

Query: 187 QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG-LRNEPP-------TGNII 238
              + +                A + +  SGI+YT +R    +    P          +I
Sbjct: 113 NPFHMS-----------PYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLI 161

Query: 239 METEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEI 275
               D      I+R+ +A   +  + +P++  K   +
Sbjct: 162 YPAGDGR-INYITRNDIARGVIAIIKNPDTWGKRYLL 197

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 89.7 bits (223), Expect = 8e-21
 Identities = 28/177 (15%), Positives = 54/177 (30%), Gaps = 25/177 (14%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK 127
           K  V GATG  G      + A G  +    R   + +          +   A++ + +  
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL---AYLEPECRVAEMLDHAG- 70

Query: 128 LSEAIGDDSEAVV-CATGFQPGWDLFAPWKAIN------LVEACRKRGVNRFILISSILV 180
           L  A+    + V+  A  +      +    A           AC +  V R + + S   
Sbjct: 71  LERAL-RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYA 129

Query: 181 NGAAMGQI-------LNPAYIFLNVFGLTLIAKLQAEQYIR---KSGINYTIIRPGG 227
                  +        +      + + L    K   ++  R   ++G+   I  PG 
Sbjct: 130 MPRHPQGLPGHEGLFYDSLPSGKSSYVLC---KWALDEQAREQARNGLPVVIGIPGM 183

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 87.3 bits (216), Expect = 4e-20
 Identities = 43/248 (17%), Positives = 84/248 (33%), Gaps = 37/248 (14%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-------DLDKAKTTLSKDNPSLQIVKA 119
            KI + G TG+ G+ IV   +  G    A VR          K +   +  +  + +++ 
Sbjct: 3   NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEG 62

Query: 120 DVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL 179
           D+ +    L +AI    + V+CA G     D       + +++A ++ G  +    S   
Sbjct: 63  DINDHET-LVKAI-KQVDIVICAAGRLLIED------QVKIIKAIKEAGNVKKFFPSEFG 114

Query: 180 VNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG-----LRNEPPT 234
           ++        +       VF      K    + I   G+ YT +         LRN    
Sbjct: 115 LDVDRH----DAVEPVRQVFE----EKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQL 166

Query: 235 GNIIMETEDTLYEG-------TISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYE 287
                  +  +  G        ++   V    + A   P +  K V I  R+     +  
Sbjct: 167 DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHI--RLPKNYLTQN 224

Query: 288 DLFGSIKQ 295
           ++    ++
Sbjct: 225 EVIALWEK 232

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 87.8 bits (217), Expect = 5e-20
 Identities = 40/226 (17%), Positives = 78/226 (34%), Gaps = 32/226 (14%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR----DLDKAKTTLSKDNPSLQIVKADVT 122
            ++ +AGATG  G+ +    L          R       KAK   + ++    IV   + 
Sbjct: 11  GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN 70

Query: 123 EGSAKLSEAI-GDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVN 181
           E  A + + +   + + VV   G +      +    I LV+A +  G  +  L S    +
Sbjct: 71  EQEA-MEKILKEHEIDIVVSTVGGE------SILDQIALVKAMKAVGTIKRFLPSEFGHD 123

Query: 182 GAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG-----GLRNEPPTGN 236
                   +P    LN++      K +  Q + +SGI +T I           N      
Sbjct: 124 VNRA----DPVEPGLNMYR----EKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSE 175

Query: 237 IIMETEDTLYEGT-------ISRDQVAEVAVEALLHPESSYKVVEI 275
           ++  T+     G        ++   + +  ++ +    +  K V  
Sbjct: 176 VLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHF 221

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 85.8 bits (213), Expect = 9e-20
 Identities = 47/218 (21%), Positives = 81/218 (37%), Gaps = 33/218 (15%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFA--VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           I V GATG  G  +++ LL K  A  + A VR+++KA T   +    +++   D  +   
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQG---VEVRHGDYNQ-PE 58

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
            L +A       ++  +G      L    +  N+V+A R  GV             + + 
Sbjct: 59  SLQKAF-AGVSKLLFISGPHYDNTLLIV-QHANVVKAARDAGVKHIAYTGYAFAEESIIP 116

Query: 187 QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG---------GLRNEPPTGNI 237
             L   +             L  E  IR + I YT +R           GLR    +G I
Sbjct: 117 --LAHVH-------------LATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAI 161

Query: 238 IMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEI 275
           +      +   +++R+++A  A   L       K   +
Sbjct: 162 VTNAGSGI-VNSVTRNELALAAATVLTEEGHENKTYNL 198

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 86.5 bits (214), Expect = 1e-19
 Identities = 41/239 (17%), Positives = 72/239 (30%), Gaps = 28/239 (11%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTLSKDNPSLQIVKADVTEGS 125
            KI + G TG  G  +V+  L  G       R +  K        +    IVK ++ E  
Sbjct: 12  SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDE-H 70

Query: 126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAM 185
            KL E +    + V+ A  F    D         ++EA +  G  +  L S   V     
Sbjct: 71  EKLVELM-KKVDVVISALAFPQILD------QFKILEAIKVAGNIKRFLPSDFGVE---- 119

Query: 186 GQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRN--EPPTGNIIMETED 243
                     L  F   +  K    + I ++ I YT +      +             ++
Sbjct: 120 ----EDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDE 175

Query: 244 TLYEG-------TISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ 295
               G             +    ++    P +  +VV    R      +  +L    ++
Sbjct: 176 ITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIY--RPSTNIITQLELISRWEK 232

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 83.9 bits (208), Expect = 5e-19
 Identities = 45/217 (20%), Positives = 81/217 (37%), Gaps = 34/217 (15%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFA--VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           I + GATG  G  ++E L+    A  + A VR+  KA+   ++    + + +AD  +  A
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQG---ITVRQADYGD-EA 57

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
            L+ A+    E ++  +  + G          N++ A +  GV      S +  + + +G
Sbjct: 58  ALTSAL-QGVEKLLLISSSEVGQRAPQ---HRNVINAAKAAGVKFIAYTSLLHADTSPLG 113

Query: 187 QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG-LRNEPP-------TGNII 238
                               ++ E+ +  SGI YT++R G    N           G  I
Sbjct: 114 ---------------LADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFI 158

Query: 239 METEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEI 275
               D     + +R   A  A   +       KV E+
Sbjct: 159 GAAGDGK-IASATRADYAAAAARVISEAGHEGKVYEL 194

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 80.2 bits (198), Expect = 5e-18
 Identities = 42/250 (16%), Positives = 87/250 (34%), Gaps = 39/250 (15%)

Query: 49  MGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTT 106
           M ++E   +  E+  ++ K +F+ GA+G +G+ +++++L +G    V    R   +  T 
Sbjct: 1   MAETEALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR---RKLTF 57

Query: 107 LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG---FQPGWDLFAP---WKAINL 160
             +   ++     D  +     S   G D     C  G    + G + F        +  
Sbjct: 58  DEEAYKNVNQEVVDFEKLDDYASAFQGHD--VGFCCLGTTRGKAGAEGFVRVDRDYVLKS 115

Query: 161 VEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGI-N 219
            E  +  G   F L+SS   + ++    L                K + E  + +     
Sbjct: 116 AELAKAGGCKHFNLLSSKGADKSSNFLYLQ--------------VKGEVEAKVEELKFDR 161

Query: 220 YTIIRPG---GLRNEPPTGNIIMETEDTLYEGTISR------DQVAEVAVEALLHPESSY 270
           Y++ RPG     R E   G  ++         + +         V    +  ++ P    
Sbjct: 162 YSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-- 219

Query: 271 KVVEIISRVD 280
           K +E++    
Sbjct: 220 KQMELLENKA 229

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 78.1 bits (192), Expect = 9e-17
 Identities = 34/227 (14%), Positives = 69/227 (30%), Gaps = 34/227 (14%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL------DKAKTTLSKDNPSLQIVKAD 120
           +KI + G TG  GK +V   L+         R L         +      +  + I++ +
Sbjct: 5   EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64

Query: 121 VTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILV 180
           + E   K+   +    + V+ A  F            I+++ A +  G  +  L S    
Sbjct: 65  MEE-HEKMVSVL-KQVDIVISALPFP------MISSQIHIINAIKAAGNIKRFLPSDFGC 116

Query: 181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG-----GLRNEPPTG 235
               +          L  F   L  K    + I  + + YT +         +       
Sbjct: 117 EEDRIKP--------LPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPS 168

Query: 236 NIIMETED-TLYEG------TISRDQVAEVAVEALLHPESSYKVVEI 275
                 +D  +Y            + +A+  ++    P    ++V  
Sbjct: 169 PHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIY 215

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 69.7 bits (171), Expect = 5e-14
 Identities = 34/168 (20%), Positives = 56/168 (33%), Gaps = 16/168 (9%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
              KI +AG  G  G  +  +L A+G  V    R               +Q + ADVT  
Sbjct: 2   SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPA-------GVQTLIADVTR- 52

Query: 125 SAKLSEAIGDDSEAVVCA----TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILV 180
              L+  +    E +V            + L       N + A     +     +SS  V
Sbjct: 53  PDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGV 112

Query: 181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGL 228
            G  + + L+           +    L+AE  +     + TI+R  G+
Sbjct: 113 YGQEVEEWLDEDTP-PIAKDFSGKRMLEAEALLA--AYSSTILRFSGI 157

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 67.4 bits (165), Expect = 1e-13
 Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 41/226 (18%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFA--VKAGVRDLDKAKTTLSKDNPSLQIVKADVT 122
             K++ +AGATG +G+ +++++L++     V A  R           ++P L      + 
Sbjct: 4   TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK-------ALAEHPRLDNPVGPLA 56

Query: 123 EGSAKLSEAIGDDSEAVVCATG--FQPGWDLFAPWK-----AINLVEACRKRGVNRFILI 175
           E    L   +    +   C  G   +      A         + + +   + G   ++++
Sbjct: 57  E----LLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVV 112

Query: 176 SSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGI-NYTIIRPG---GLRNE 231
           S++  +  +        Y            K + EQ +++ G    TI RP    G R E
Sbjct: 113 SALGADAKSSI-----FY---------NRVKGELEQALQEQGWPQLTIARPSLLFGPREE 158

Query: 232 PPTGNIIMETEDTLYEGT---ISRDQVAEVAVEALLHPESSYKVVE 274
                I+      +  G    I    +A       L      + VE
Sbjct: 159 FRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVE 204

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 46/236 (19%), Positives = 79/236 (33%), Gaps = 55/236 (23%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           K++ V GA G  G+ + E+L      ++  + DL      L    P+ + V+ D+ + +A
Sbjct: 4   KRLLVTGAAGQLGRVMRERLAPMAEILR--LADLS----PLDPAGPNEECVQCDLADANA 57

Query: 127 KLSEAIGDDSEAVV-CATGFQPGWDLFAPWKAI---------NLVEACRKRGVNRFILIS 176
            ++  +    + +V        G  +  P++ I         NL EA R  G  R +  S
Sbjct: 58  -VNAMV-AGCDGIVHLG-----GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFAS 110

Query: 177 SILVNGAAMGQILNPAYIF---------LNVFGLTLIAKLQAEQYIR----KSGINYTII 223
           S       +G    P               ++G++   K   E   R    K G    ++
Sbjct: 111 SN----HTIGY--YPQTERLGPDVPARPDGLYGVS---KCFGENLARMYFDKFGQETALV 161

Query: 224 RPGGLRNEPPTGNIIMETEDTLYEGT-ISRDQVAEVAVEALLHPESSYKVVEIISR 278
           R          G+   E  +     T  S D    +       P     VV   S 
Sbjct: 162 RI---------GSCTPEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASA 208

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 45/232 (19%), Positives = 71/232 (30%), Gaps = 57/232 (24%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            ++ V GA G  G  I   L          VR  D             +IV  D+ +  A
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHE----VRLSDIVDL--GAAEAHEEIVACDLADAQA 56

Query: 127 KLSEAIGDDSEAVV--CATGFQPGWDLFAPWKAI---------NLVEACRKRGVNRFILI 175
            + + +  D + ++       +       PW  I         NL EA R  G  R +  
Sbjct: 57  -VHDLV-KDCDGIIHLGGVSVE------RPWNDILQANIIGAYNLYEAARNLGKPRIVFA 108

Query: 176 SSILVNGAAMGQILNPAYIF---------LNVFGLTLIAKLQAEQYIR----KSGINYTI 222
           SS       +G    P              +++GL+   K   E        K  I    
Sbjct: 109 SS----NHTIG--YYPRTTRIDTEVPRRPDSLYGLS---KCFGEDLASLYYHKFDIETLN 159

Query: 223 IRPGGLRNEPPTGNIIMETED-TLYEGTISRDQVAEVAVEALLHPESSYKVV 273
           IR          G+   + +D  +    +S D    +   A + P+    VV
Sbjct: 160 IRI---------GSCFPKPKDARMMATWLSVDDFMRLMKRAFVAPKLGCTVV 202

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 61.5 bits (150), Expect = 5e-11
 Identities = 53/255 (20%), Positives = 91/255 (35%), Gaps = 60/255 (23%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT-----LSKDNPSLQIVKA 119
           + + + V GA+G  G  +V +LL +G+ V+A VRD    K       L K    L + KA
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKA 63

Query: 120 DVT-EGSAKLSEAIGDDSEAVV-CATGFQ-----PGWDLFAPWKAI----NLVEACRKRG 168
           D+  EGS    EAI      V   AT        P  ++  P   I     ++++C    
Sbjct: 64  DLADEGS--FDEAI-KGCTGVFHVATPMDFESKDPENEVIKP--TIEGMLGIMKSCAAAK 118

Query: 169 -VNRFILISSILVNGAAMGQILNPAYI----------FLNVFGLTL----IAKLQAEQ-- 211
            V R +  SS       +    +   +          F     +T     ++K  AEQ  
Sbjct: 119 TVRRLVFTSSA----GTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAA 174

Query: 212 --YIRKSGINYTIIRPGG-----LRNEPPTGNII----METEDTLYEGTIS------RDQ 254
             Y +++ I++  I P       + +  P   I     +   +  Y            D 
Sbjct: 175 WKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDD- 233

Query: 255 VAEVAVEALLHPESS 269
           +    +    +P++ 
Sbjct: 234 LCNAHIYLFENPKAE 248

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 60.3 bits (147), Expect = 1e-10
 Identities = 43/129 (33%), Positives = 57/129 (44%), Gaps = 21/129 (16%)

Query: 66  QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPS-LQIVKADV 121
           +K   V G TG     +V+ LL KG+AV   VRD D  K     L       L+I +AD+
Sbjct: 9   KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADL 68

Query: 122 T-EGSAKLSEAIGDDSEAVV-CATGFQ-----PGWDLFAPWKAI----NLVEACRK-RGV 169
           T E S      I    + V   AT        P  D+  P  AI    N+++AC + + V
Sbjct: 69  TDELS--FEAPI-AGCDFVFHVATPVHFASEDPENDMIKP--AIQGVVNVMKACTRAKSV 123

Query: 170 NRFILISSI 178
            R IL SS 
Sbjct: 124 KRVILTSSA 132

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 33/187 (17%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           KK+F+ G  G  G  I E LL +G  V  G+ +    +    KD+P+L  V+  + +  A
Sbjct: 22  KKVFITGICGQIGSHIAELLLERGDKV-VGIDNFATGRREHLKDHPNLTFVEGSIAD-HA 79

Query: 127 KLSEAIGDDSEAVVC---ATGFQPGWDLFAPWKA-----INLVEACRKRGVNRFILISSI 178
            +++ IGD     V    A+   P  D +           N+V+A +K  V RF+   + 
Sbjct: 80  LVNQLIGDLQPDAVVHTAASYKDPD-DWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT- 137

Query: 179 LVNGAAMGQILNPAYIFLNV----------FGLTLIAKLQAEQYIRKSGINYTIIRPG-- 226
                  G  + P    + +          + ++   K   E Y+  SG+++   R    
Sbjct: 138 ---ALCYG--VKPIQQPVRLDHPRNPANSSYAIS---KSANEDYLEYSGLDFVTFRLANV 189

Query: 227 -GLRNEP 232
            G RN  
Sbjct: 190 VGPRNVS 196

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 58.1 bits (141), Expect = 7e-10
 Identities = 32/128 (25%), Positives = 46/128 (35%), Gaps = 18/128 (14%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA---KTTLSKDNPS--LQIVKA 119
           +   + V GA G     +VEQLL  G+ V+   R   K    +       P      V  
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 120 DVTEGSAKLSEAIGDDSEAVV-CATGFQ---PGWDLFAPWKAI----NLVEACRKRG-VN 170
           D+ +  A   E I   +  V   A+         ++  P  AI    N + A      V 
Sbjct: 70  DMLKQGA-YDEVI-KGAAGVAHIASVVSFSNKYDEVVTP--AIGGTLNALRAAAATPSVK 125

Query: 171 RFILISSI 178
           RF+L SS 
Sbjct: 126 RFVLTSST 133

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 56.8 bits (138), Expect = 2e-09
 Identities = 43/253 (16%), Positives = 85/253 (33%), Gaps = 60/253 (23%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK------TTLSKDNPSLQIVKAD 120
            ++ V G TG  G  I++ LL  G++V   +R   + K      T L   +  L    AD
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD 61

Query: 121 VT-EGSAKLSEAIGDDSEAVV-CATGFQ-----PGWDLFAPWKAI----NLVEACRKRG- 168
           ++   S   + AI +    +   A+        P   +      +     +++AC     
Sbjct: 62  LSNPDS--FAAAI-EGCVGIFHTASPIDFAVSEPEEIVTKR--TVDGALGILKACVNSKT 116

Query: 169 VNRFILISSILVNGAAMGQILNPAYIF-------------LNVFGLT-LIAKLQAEQ--- 211
           V RFI  SS     +A+        +              +  FG    ++K  AE+   
Sbjct: 117 VKRFIYTSSG----SAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVL 172

Query: 212 -YIRKSGINYTIIRPGG-----LRNEPPTGN-----IIMETEDTLYEGTIS----RDQVA 256
            +  ++GI+   +         +  + P        +++  ++ +           D VA
Sbjct: 173 EFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDD-VA 231

Query: 257 EVAVEALLHPESS 269
              +  L +    
Sbjct: 232 RAHIYLLENSVPG 244

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 55.0 bits (133), Expect = 6e-09
 Identities = 38/191 (19%), Positives = 72/191 (37%), Gaps = 40/191 (20%)

Query: 69  IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL 128
           I V G++G  G  +V  L  K         D+      + +D   ++ +  DV+     +
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDI------VQRDTGGIKFITLDVSNRDE-I 54

Query: 129 SEAIGDDSE-------AVVCATG---FQPGWDL----FAPWKAINLVEACRKRGVNRFIL 174
             A+   S         ++ A G       + +           N++EA ++  V + ++
Sbjct: 55  DRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGT-----YNILEAAKQHRVEKVVI 109

Query: 175 ISSILVNGAAMGQ-------ILNPAYIFLNVFGLT-LIAKLQAEQYIRKSGINYTIIRPG 226
            S+I V G    +       I  P      +FG+T + A+L  + Y  K G++   +R  
Sbjct: 110 PSTIGVFGPETPKNKVPSITITRP----RTMFGVTKIAAELLGQYYYEKFGLDVRSLRYP 165

Query: 227 GL--RNEPPTG 235
           G+      PT 
Sbjct: 166 GIISYKAEPTA 176

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 55.1 bits (133), Expect = 7e-09
 Identities = 49/251 (19%), Positives = 82/251 (32%), Gaps = 56/251 (22%)

Query: 60  ENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD---LDKAKT-TLSKDNPSLQ 115
           EN+  +   I + GA G  G+++ ++L+  G      V     +D  +    +  + ++ 
Sbjct: 8   ENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVD 67

Query: 116 IVKADVTEGSAKLSEAIGDDSEAVVC------ATG---FQPGWD--LFAPWKAINLVEAC 164
              AD++    +  + +    + +              F  G+   L        L +A 
Sbjct: 68  ARAADLSA-PGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDG---TRYLFDAI 123

Query: 165 RKRGVN-----RFILISSILVNGAAMGQ------ILNPAYIFLNVFGLTLIAKLQAEQYI 213
           R          R +  SSI V GA +           P    L  +G     K   E  +
Sbjct: 124 RIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTP----LTSYGTQ---KAICELLL 176

Query: 214 ----RKSGINYTIIR-PG-----GLRNEPPTG---NIIMET----EDTLYEGTISRDQVA 256
               R+   +   IR P      G  N   +G   NI+ E     E  L      R   A
Sbjct: 177 SDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHA 236

Query: 257 EV--AVEALLH 265
               AV  L+H
Sbjct: 237 SPRSAVGFLIH 247

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 21/163 (12%), Positives = 49/163 (30%), Gaps = 13/163 (7%)

Query: 66  QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS 125
              +   G  G + + +   L  +G+ +    R+ D+          +++   A+     
Sbjct: 5   TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQM--------EAIRASGAEPLLWP 55

Query: 126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAM 185
            +      D    ++ +T    G D      A+    A R         +S+  V G   
Sbjct: 56  GEEPSL--DGVTHLLISTAPDSGGDPVL--AALGDQIAARAAQFRWVGYLSTTAVYGDHD 111

Query: 186 GQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGL 228
           G  ++                +  +Q+     +   + R  G+
Sbjct: 112 GAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGI 154

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 37/224 (16%), Positives = 62/224 (27%), Gaps = 62/224 (27%)

Query: 42  HSINSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL- 100
           H  +   MG     EE  + +  + K   + G  G  G  ++E LL     V  G+ +  
Sbjct: 3   HHHHHGSMGMMSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKV-VGLDNFA 61

Query: 101 --------DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV------------- 139
                   +       K   + + ++ D+               + V             
Sbjct: 62  TGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN--LDDCNNACAGVDYVLHQAALGSVPRSI 119

Query: 140 --------VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG----- 186
                       GF            +N++ A R   V  F   +S    G   G     
Sbjct: 120 NDPITSNATNIDGF------------LNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVE 167

Query: 187 -QILNPAYIFLNVFGLTLIAKLQAEQYI----RKSGINYTIIRP 225
             I  P    L+ + +T   K   E Y     R  G +   +R 
Sbjct: 168 DTIGKP----LSPYAVT---KYVNELYADVFSRCYGFSTIGLRY 204

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 49.1 bits (118), Expect = 6e-07
 Identities = 36/195 (18%), Positives = 66/195 (33%), Gaps = 32/195 (16%)

Query: 49  MGKSEITEEAEENVSVKQK--KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT 106
           MG S         +  +    +I + G  G  G  ++E  L +G  +   + +    K  
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEI-LVIDNFATGKRE 59

Query: 107 LSKDNPSLQIVKADVTEGSAKLSEAIGDDS-EAVV--CATGFQPGWDLFAPWK-----AI 158
           +      L +++  VT+ +  L  A        VV   A   +   D           +I
Sbjct: 60  VLPPVAGLSVIEGSVTD-AGLLERAFDSFKPTHVVHSAAAY-KDPDDWAEDAATNVQGSI 117

Query: 159 NLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF---------LNVFGLTLIAKLQA 209
           N+ +A  K GV R +   + L  G        PA +             +G++   K   
Sbjct: 118 NVAKAASKAGVKRLLNFQTALCYG-------RPATVPIPIDSPTAPFTSYGIS---KTAG 167

Query: 210 EQYIRKSGINYTIIR 224
           E ++  S +    +R
Sbjct: 168 EAFLMMSDVPVVSLR 182

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 40/205 (19%), Positives = 59/205 (28%), Gaps = 28/205 (13%)

Query: 43  SINSTKMGKSEITEEAEENV-SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD 101
           + N T  G     E   E     +  KI + GA G     I  +L  +G  V        
Sbjct: 5   TTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVI-ASDWKK 63

Query: 102 KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV---CATGFQPGWDLFAPWK-- 156
               T         +V   V E   K++E +    + V       G   G+         
Sbjct: 64  NEHMTEDMFCDEFHLVDLRVMENCLKVTEGV----DHVFNLAADMG-GMGFIQSNHSVIM 118

Query: 157 ------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF---LNVFGLTL---I 204
                 + N++EA R  G+ RF   SS  +             +               +
Sbjct: 119 YNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGL 178

Query: 205 AKLQAE----QYIRKSGINYTIIRP 225
            KL  E     Y +  GI   I R 
Sbjct: 179 EKLATEELCKHYNKDFGIECRIGRF 203

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 45.6 bits (109), Expect = 7e-06
 Identities = 38/208 (18%), Positives = 63/208 (30%), Gaps = 62/208 (29%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            KI V G TG  G+ +VE +   G         L ++    +K     +   +D T    
Sbjct: 3   LKIAVTGGTGFLGQYVVESIKNDGNTPII----LTRSIG--NKAINDYEYRVSDYT--LE 54

Query: 127 KLSEAIGDDSEAVV---CATGFQPGWDLFAPWKA--------INLVEACRKRGVNRFILI 175
            L   + +D +AVV      G Q                    NL +AC +  ++  +  
Sbjct: 55  DLINQL-NDVDAVVHLAATRGSQG------KISEFHDNEILTQNLYDACYENNISNIVYA 107

Query: 176 SSILVNGAAMG------QILNPAYIFLNVFGLTLIAKLQAEQYI----RKSGINYTIIR- 224
           S+I              ++  P      ++G++   KL  E       RK G+    +R 
Sbjct: 108 STISAYSDETSLPWNEKELPLP----DLMYGVS---KLACEHIGNIYSRKKGLCIKNLRF 160

Query: 225 ---------PGG---------LRNEPPT 234
                                   E  T
Sbjct: 161 AHLYGFNEKNNYMINRFFRQAFHGEQLT 188

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 17/127 (13%), Positives = 38/127 (29%), Gaps = 27/127 (21%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKA------GVRDLDKAKTTLSKDNPSLQIVK 118
            + +I + G  G  G  +   L+A G  V              +       + P L++ +
Sbjct: 6   LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKF-LEKPVLELEE 64

Query: 119 ADVTEGSAKLSEA--------IGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVN 170
            D+++       A             + +                   +L+  C   GV 
Sbjct: 65  RDLSDVRLVYHLASHKSVPRSFKQPLDYLDNVDSG------------RHLLALCTSVGVP 112

Query: 171 RFILISS 177
           + ++ S+
Sbjct: 113 KVVVGST 119

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 41.3 bits (97), Expect = 4e-05
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 63  SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADV 121
           +  +  I V GA G  G+ I   L     ++V     DL         +   +   + D 
Sbjct: 2   NAMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALA---VLNRMGVATKQVDA 57

Query: 122 TEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRF 172
            +  A L++A+    +AV+ A  F         +    + +A +  G + F
Sbjct: 58  KD-EAGLAKAL-GGFDAVISAAPF---------FLTPIIAKAAKAAGAHYF 97

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 43.2 bits (101), Expect = 6e-05
 Identities = 12/123 (9%), Positives = 30/123 (24%), Gaps = 10/123 (8%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTLSKDNPSLQIVKADVTEGS 125
               + G TG  G  + E L           V  + +       ++  +  V+ D++   
Sbjct: 2   SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDIS-DP 60

Query: 126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAIN------LVEACRK--RGVNRFILISS 177
                 +   ++                     N      +++A       +    L + 
Sbjct: 61  DDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTG 120

Query: 178 ILV 180
              
Sbjct: 121 RKH 123

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 42.0 bits (99), Expect = 9e-05
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 11/82 (13%)

Query: 66  QKKIFVAGATGSSGKRIVEQLL---AKGFAVKAGVRDLDKAK--TTLSKDNPSLQIVKAD 120
              I + G     G  +V+ LL        +    R+ ++AK    L+K++ ++ I++ D
Sbjct: 21  MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEID 80

Query: 121 VT------EGSAKLSEAIGDDS 136
           +       +  A +     D  
Sbjct: 81  LRNFDAYDKLVADIEGVTKDQG 102

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 6/67 (8%)

Query: 63  SVKQKKIFVAGATGSS---GKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKA 119
           S   K   V   TG+S   G+ I E  +A G  V    R  +     ++      + +  
Sbjct: 2   SESAKVWLV---TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL 58

Query: 120 DVTEGSA 126
           DVT+G  
Sbjct: 59  DVTDGER 65

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 53/189 (28%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGS 125
           ++ V G  G  G  IVE LLA+G  V A + +L     T  ++N    +   + D+ +  
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEV-AVLDNL----ATGKRENVPKGVPFFRVDLRD-K 55

Query: 126 AKLSEAIGDDS-EAVV--CATGF------QPGWDLFAPWKA-----INLVEACRKRGVNR 171
             +  A  +     V    A          P  D    ++      +NL+EACR+ GV +
Sbjct: 56  EGVERAFREFRPTHVSHQAAQASVKVSVEDPVLD----FEVNLLGGLNLLEACRQYGVEK 111

Query: 172 FILISSILVNGAAM-GQI-----------LNPAYIFLNVFGLTLIAKLQAEQYIR----K 215
            +  S+    G A+ G++             P     + +  +   K   E Y+      
Sbjct: 112 LVFAST----GGAIYGEVPEGERAEETWPPRP----KSPYAAS---KAAFEHYLSVYGQS 160

Query: 216 SGINYTIIR 224
            G+ +  +R
Sbjct: 161 YGLKWVSLR 169

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 21/152 (13%), Positives = 45/152 (29%), Gaps = 45/152 (29%)

Query: 56  EEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL---------DKAKTT 106
           EE  + +    K   + G  G  G  ++E+LL     V  G+ +          +     
Sbjct: 15  EEITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVI-GLDNFSTGHQYNLDEVKTLV 73

Query: 107 LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV---------------------VCATGF 145
            ++       ++ D+ + +    + +    + V                        TGF
Sbjct: 74  STEQWSRFCFIEGDIRDLTT-CEQVM-KGVDHVLHQAALGSVPRSIVDPITTNATNITGF 131

Query: 146 QPGWDLFAPWKAINLVEACRKRGVNRFILISS 177
                       +N++ A +   V  F   +S
Sbjct: 132 ------------LNILHAAKNAQVQSFTYAAS 151

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 20/91 (21%)

Query: 158 INLVEACRKRGVNRFILISSILVNGAAMGQ-------ILNPAYIFLNVFGLTLIAKLQAE 210
            +++   + + + +    SSI V G    +       I+ P      V+G++   K   E
Sbjct: 99  FHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEP----STVYGIS---KQAGE 151

Query: 211 QYI----RKSGINYTIIRPGGL--RNEPPTG 235
           ++        G++   IR  GL   + PP G
Sbjct: 152 RWCEYYHNIYGVDVRSIRYPGLISWSTPPGG 182

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 25/183 (13%)

Query: 63  SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT 122
           S+K KK+ + G  G  G  + +++L        G+ D+   +      +  +   + D+T
Sbjct: 21  SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGM-DMQTDRLGDLVKHERMHFFEGDIT 79

Query: 123 EGSAKLSEAIGDDSEAV---VCATGFQPGWDLFAPWK--------AINLVEACRKRGVNR 171
             + +  E      + +   V      P   +  P +         + +V +  K G   
Sbjct: 80  I-NKEWVEYHVKKCDVILPLVAIAT--PATYVKQPLRVFELDFEANLPIVRSAVKYGK-H 135

Query: 172 FILISSILVNGAAMGQILNP---AYIFLNVFGLTLI---AKLQAEQYI---RKSGINYTI 222
            +  S+  V G    +  +P   A  +  +     I   +K   ++ I      G+N+T+
Sbjct: 136 LVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTL 195

Query: 223 IRP 225
            RP
Sbjct: 196 FRP 198

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 27/235 (11%), Positives = 64/235 (27%), Gaps = 71/235 (30%)

Query: 63  SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-------KDNPSLQ 115
            +    + V G  G  G  +V++LL  G      V  +D     L         D+P+++
Sbjct: 29  KLANTNVMVVGGAGFVGSNLVKRLLELGVNQ---VHVVDN----LLSAEKINVPDHPAVR 81

Query: 116 IVKADVTEGSAKLSEAIGDDSEAV---------------------VCATGFQPGWDLFAP 154
             +  +T+    L  ++ D+ + V                                    
Sbjct: 82  FSETSITD--DALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTT--------- 130

Query: 155 WKAINLVEACRK-RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL---------I 204
              + L E  +  + + + +  ++    G ++ +             +           +
Sbjct: 131 ---LKLYERLKHFKRLKKVVYSAA----GCSIAEKTFDDAKATEETDIVSLHNNDSPYSM 183

Query: 205 AKLQAEQYI----RKSGINYTIIRPG---GLRNEPPTGNIIMETEDTLYEGTISR 252
           +K+  E Y     ++  +     R     G       G        T++      
Sbjct: 184 SKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTP-ATVWRNVTPT 237

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 42/274 (15%), Positives = 77/274 (28%), Gaps = 96/274 (35%)

Query: 61  NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--------------KAKTT 106
           +  ++ + I + G  G  G  +           K  V  LD                   
Sbjct: 5   DDELENQTILITGGAGFVGSNLAFHFQENHPKAK--VVVLDKFRSNTLFSNNRPSSLGHF 62

Query: 107 LSKDNPSLQIVKADVTEGSAKLSE------------AIGDDSEAV------VCATGFQPG 148
            +      +++ AD+                     A+ D +              F   
Sbjct: 63  KNLIGFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAF--- 119

Query: 149 WDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAM----------GQILNPAYIFLNV 198
                    +NL+E  R +   + I  SS     A +          G+  +P     NV
Sbjct: 120 ---------LNLLEIARSKKA-KVIYASS-----AGVYGNTKAPNVVGKNESP----ENV 160

Query: 199 FGLTLIAKLQAEQYIRKSGINYTIIRPGGLR-------NEPPTG----------NIIMET 241
           +G +   KL  ++++     +   +   GLR        E                 M  
Sbjct: 161 YGFS---KLCMDEFVLSHSNDNVQV---GLRYFNVYGPREFYKEKTASMVLQLALGAMAF 214

Query: 242 ED-TLYE-GTISRDQ-----VAEVAVEALLHPES 268
           ++  L+E G   RD      V +  V+A+   +S
Sbjct: 215 KEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKS 248

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 61/264 (23%), Positives = 86/264 (32%), Gaps = 78/264 (29%)

Query: 62  VSVKQKKIFVAGAT-GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD--------NP 112
           V+ K K + + GA  GS G  +++ LL  G  V        K  T   +           
Sbjct: 472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGS 531

Query: 113 SLQIV------KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDL-----FA--PWKAIN 159
           +L +V      K DV      L E I D  +          GWDL     FA  P + I 
Sbjct: 532 TLIVVPFNQGSKQDVE----ALIEFIYDTEKNGG------LGWDLDAIIPFAAIPEQGIE 581

Query: 160 LVE-------ACRKRGVNRFILISSILVNGAAMGQILNPAYIFL----N--VFG------ 200
           L         A R    N   ++  +    +A G    PA + L    N   FG      
Sbjct: 582 LEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDGMYS 641

Query: 201 -----L-TLIAKLQAE---QYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEG--- 248
                L TL  +  +E     +   G      R  GL          M   + + EG   
Sbjct: 642 ESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGL----------MSANNIIAEGIEK 691

Query: 249 ----TISRDQVAEVAVEALLHPES 268
               T S+ ++A   +  LL PE 
Sbjct: 692 MGVRTFSQKEMAFNLL-GLLTPEV 714

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 33/184 (17%), Positives = 60/184 (32%), Gaps = 49/184 (26%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGS 125
           +I V G  G  G  +V++L+  G+ V   V +L    ++  ++   PS ++   D+ + S
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEV-VVVDNL----SSGRREFVNPSAELHVRDLKDYS 56

Query: 126 AKLSEAIGDDSEAVV---CATGFQPGWDLFAPWK--------AINLVEACRKRGVNRFIL 174
                      + V         +       P            N++E  R+ GV   + 
Sbjct: 57  WGAGIKG----DVVFHFAANPEVRLSTT--EPIVHFNENVVATFNVLEWARQTGVRTVVF 110

Query: 175 ISSILVNGAAMG----------QILNPAYIFLNVFGLTLIAKLQAEQYI----RKSGINY 220
            SS        G          +   P    ++V+G     K   E       R  G+  
Sbjct: 111 ASS----STVYGDADVIPTPEEEPYKP----ISVYGAA---KAAGEVMCATYARLFGVRC 159

Query: 221 TIIR 224
             +R
Sbjct: 160 LAVR 163

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 25/81 (30%)

Query: 158 INLVEACRKRGVNRFILISSILVNGAAMG----------QILNPAYIFLNVFGLTLIAKL 207
             L+EA RK GV+R +  S+        G             +P    ++++G +   KL
Sbjct: 95  YRLLEAMRKAGVSRIVFTST----STVYGEAKVIPTPEDYPTHP----ISLYGAS---KL 143

Query: 208 QAEQYIRKS----GINYTIIR 224
             E  I        +   I R
Sbjct: 144 ACEALIESYCHTFDMQAWIYR 164

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 66  QKKIFVAGATGSSGKRIVEQLLAKGFAVK--AGVRDLDKAKTTLSKDNPSLQIVKADVT- 122
              + V GA    G  +V+QL+         A  RD++KA    S  +  + ++   VT 
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62

Query: 123 -----EGSAKLSEAIGDDS 136
                   +K+ E +G D 
Sbjct: 63  DKSLDTFVSKVGEIVGSDG 81

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 39.9 bits (93), Expect = 7e-04
 Identities = 31/207 (14%), Positives = 61/207 (29%), Gaps = 46/207 (22%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV----------------------RDLDK 102
           + + + + GATG  G+ +V +LL +   V   +                       D + 
Sbjct: 72  ELRTVLLTGATGFLGRYLVLELLRRL-DVDGRLICLVRAESDEDARRRLEKTFDSGDPEL 130

Query: 103 AKTTLSKDNPSLQIVKADVTEGSAKLSEA----IGDDSEAVV-CA--TGFQPGWDLFAP- 154
            +         L++V  D +E    L +     + +  + +V  A      P  +LF P 
Sbjct: 131 LRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPN 190

Query: 155 -WKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI--------- 204
                 L+       +  F  +S+  V  A              +     +         
Sbjct: 191 VAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYG 250

Query: 205 -AKLQAEQYIR----KSGINYTIIRPG 226
            +K   E  +R       +   + R G
Sbjct: 251 TSKWAGEVLLREANDLCALPVAVFRCG 277

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score = 39.4 bits (93), Expect = 7e-04
 Identities = 42/175 (24%), Positives = 64/175 (36%), Gaps = 47/175 (26%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKA-GVRDLD-----KAKTTLSKDNPSLQIVKA-- 119
           KI + GA G  G+ I +QL  K   V    V+DLD           ++  P++ ++    
Sbjct: 14  KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNV-VINCAA 72

Query: 120 ----DVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILI 175
               D  E    L+  I         A G  P           NL  A    G    + I
Sbjct: 73  HTAVDKCEEQYDLAYKIN--------AIG--PK----------NLAAAAYSVGA-EIVQI 111

Query: 176 SSILV-NGAAMG-----QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIR 224
           S+  V +G A         +NP     + +G T   KL+ E +++     Y I+R
Sbjct: 112 STDYVFDGEAKEPITEFDEVNP----QSAYGKT---KLEGENFVKALNPKYYIVR 159

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 39.1 bits (92), Expect = 9e-04
 Identities = 38/250 (15%), Positives = 77/250 (30%), Gaps = 56/250 (22%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
               I V GA    G+ +   L+ +G  V    R   + +        ++  + AD+   
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHH 61

Query: 125 SAKLSEAIGDDSEA-------VVCATGFQPGWDLFAP--------WKA---INL---VEA 163
              +  A     E        + CA     G   F P         +     NL   +  
Sbjct: 62  ED-VDVAFAAAVEWGGLPELVLHCA-----GTGEFGPVGVYTAEQIRRVMESNLVSTILV 115

Query: 164 CR------KRGVNRFILISSILVNGAAMGQILNPAYIFLNV-----FGLTLIAK-LQAEQ 211
            +               + S         Q+        ++     +G+    + L+AE 
Sbjct: 116 AQQTVRLIGERGGVLANVLSSA------AQVGKANE---SLYCASKWGMRGFLESLRAE- 165

Query: 212 YIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYK 271
            ++ S +    + P G+R+E         T+     G ++ +  A   ++AL    S + 
Sbjct: 166 -LKDSPLRLVNLYPSGIRSE-----FWDNTDHVDPSGFMTPEDAAAYMLDALEARSSCH- 218

Query: 272 VVEIISRVDA 281
           V ++    + 
Sbjct: 219 VTDLFIGRNE 228

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	296
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.98
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.98
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.98
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.98
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.98
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.98
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.98
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.98
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.97
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.97
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.97
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.97
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.97
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.97
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.97
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.97
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.97
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.97
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.97
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.97
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.97
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.97
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.96
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.96
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.96
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.96
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.96
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.96
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.96
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.96
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.96
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.96
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.96
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.96
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.95
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.95
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.95
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.95
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.95
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.95
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.95
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.95
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.95
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.94
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.94
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.94
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.94
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.94
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.94
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.94
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.94
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.94
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.94
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.94
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.94
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.94
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.94
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.94
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.94
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.94
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.94
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.94
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.94
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.94
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.94
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.93
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.93
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.93
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.93
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.93
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.93
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.93
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.93
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.93
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.93
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.93
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.93
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.93
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.93
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.93
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.93
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.93
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.93
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.93
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.93
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.93
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.93
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.93
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.93
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.93
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.93
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.93
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.93
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.93
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.93
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.93
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.93
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.93
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.93
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.93
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.93
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.93
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.93
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.93
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.93
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.93
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.93
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.93
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.93
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.93
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.93
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.92
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.92
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.92
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.92
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.92
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.92
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.92
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.92
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.92
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.92
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.92
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.92
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.92
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.92
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.92
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.92
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.92
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.92
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.92
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.92
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.92
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.92
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.92
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.92
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.92
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.92
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.92
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.92
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.92
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.92
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.92
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.92
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.92
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.92
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.92
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.92
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.92
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.92
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.92
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.92
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.92
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.92
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.92
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.92
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.92
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.92
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.92
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.92
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.92
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.92
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.92
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.91
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.91
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.91
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.91
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.91
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.91
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.91
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.91
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.91
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.91
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.91
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.91
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.91
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.91
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.91
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.91
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.91
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.91
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.91
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.91
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.91
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.91
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.91
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.91
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.91
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.9
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.9
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.9
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.9
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.9
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.9
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.9
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.9
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.9
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.9
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.9
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.9
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.9
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.9
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.9
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.89
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.89
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.89
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.89
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.89
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.89
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.89
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.89
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.89
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.89
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.89
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.89
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.89
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.89
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.89
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.89
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.88
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.88
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.88
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.88
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.87
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.87
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.86
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.86
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.86
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.86
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.85
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.84
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.83
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.81
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.79
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.79
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.79
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.78
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.77
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.75
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.74
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.74
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.73
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.7
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.67
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.67
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.67
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.65
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.62
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.6
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.44
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.44
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.33
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.17
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.14
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.12
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	99.02
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.95
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.94
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.94
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.91
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.89
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.87
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.86
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.86
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.82
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.78
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.77
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.76
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.75
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.73
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.63
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.53
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.52
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.46
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.41
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.38
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.37
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.31
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.3
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.21
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.19
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.16
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.16
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.16
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.13
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.08
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.08
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.07
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.07
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.03
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.01
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.01
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.01
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.0
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	98.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.99
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.99
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.98
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.98
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.97
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.97
1lnq_A	336	MTHK channels, potassium channel related protein;	97.95
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.94
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.94
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.93
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.92
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.92
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.91
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.9
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.9
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.88
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.85
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.85
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.84
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.84
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.82
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.82
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.82
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.82
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.81
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.8
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.8
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.78
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.77
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.74
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.7
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.7
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.69
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.69
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.69
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.66
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.64
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.63
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.62
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.61
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.6
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.6
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.58
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.56
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.56
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.55
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.54
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.53
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.51
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.51
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.5
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.5
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.49
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.49
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.48
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.47
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.47
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.46
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.46
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.46
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.45
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.43
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.42
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.42
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.42
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.41
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.41
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.4
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.39
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.39
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.39
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.39
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.38
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.36
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.36
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.34
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.33
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.32
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.31
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	97.31
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.31
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.31
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.3
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.3
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.3
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	97.3
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.29
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.27
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.27
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.27
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.26
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.26
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	97.26
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.25
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.25
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.25
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.23
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.23
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.23
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.22
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	97.22
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.21
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.21
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.21
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.2
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.2
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.2
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.19
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.19
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	97.18
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.18
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	97.18
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	97.18
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.17
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.16
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.16
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.16
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.15
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	97.14
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.13
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.13
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	97.13
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.13
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	97.12
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	97.12
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.12
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	97.11
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.11
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.11
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.11
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.1
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.09
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.08
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.08
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.08
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.07
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.07
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.06
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.06
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.06
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	97.04

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=2.1e-34  Score=241.54  Aligned_cols=214  Identities=26%  Similarity=0.361  Sum_probs=170.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCe-EEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSL-QIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      +.+++|+|+||||+||||++++++|+++|++|++++|++++..++..   .++ +++.+|++   +.+.+++++ +|+||
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~Dl~---~~~~~~~~~-~D~vi   89 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE---RGASDIVVANLE---EDFSHAFAS-IDAVV   89 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---TTCSEEEECCTT---SCCGGGGTT-CSEEE
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh---CCCceEEEcccH---HHHHHHHcC-CCEEE
Confidence            56789999999999999999999999999999999999887765443   478 99999998   347778888 99999


Q ss_pred             EcCCCCCCCCCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 022495          141 CATGFQPGWDLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK  215 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  215 (296)
                      ||||.....+......     ..++++++++.++++||++||...+...        ..+ .+...|+.+|.++|.++++
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~--------~~~-~~~~~Y~~sK~~~e~~~~~  160 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPD--------QGP-MNMRHYLVAKRLADDELKR  160 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGG--------GSC-GGGHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCC--------CCh-hhhhhHHHHHHHHHHHHHH
Confidence            9999765332221111     1899999999999999999996544321        011 4567899999999999999


Q ss_pred             hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          216 SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       216 ~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .++++++||||+++|+...+.+...........+++++|+|++++.++.++...+++|++.+   + ..++.|+++.|++
T Consensus       161 ~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~---~-~~~~~e~~~~i~~  236 (236)
T 3e8x_A          161 SSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN---G-DTPIAKVVEQLGS  236 (236)
T ss_dssp             SSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEE---C-SEEHHHHHHTC--
T ss_pred             CCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeC---C-CcCHHHHHHHhcC
Confidence            99999999999999987766655444333346789999999999999998877788999988   4 5999999998864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.5e-34  Score=256.70  Aligned_cols=226  Identities=15%  Similarity=0.193  Sum_probs=178.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccC-CChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT-EGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~~~d~vv  140 (296)
                      .+++|+||||||+||||++|+++|+++ |++|++++|+..+.....  ...+++++.+|++ | .+.+.+++++ +|+||
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~--~~~~v~~~~~Dl~~d-~~~~~~~~~~-~d~Vi   96 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV--KHERMHFFEGDITIN-KEWVEYHVKK-CDVIL   96 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG--GSTTEEEEECCTTTC-HHHHHHHHHH-CSEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc--cCCCeEEEeCccCCC-HHHHHHHhcc-CCEEE
Confidence            456899999999999999999999998 999999999987765544  2368999999999 8 8999999998 99999


Q ss_pred             EcCCCCCCCC----CcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh------hhhHHHHHH
Q 022495          141 CATGFQPGWD----LFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL------NVFGLTLIA  205 (296)
Q Consensus       141 ~~ag~~~~~~----~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~------~~~~~y~~s  205 (296)
                      |||+......    .......     .+++++|++.+ ++|||+||.++|+...+.+..++..+.      .+.+.|+.+
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~s  175 (372)
T 3slg_A           97 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACS  175 (372)
T ss_dssp             ECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHH
T ss_pred             EcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHH
Confidence            9999654211    1111111     89999999999 899999999999987665555544321      567789999


Q ss_pred             HHHHHHHHHHh---CCcEEEEecCcccCCCCCCc-----------------------eeecccCccccCCcCHHHHHHHH
Q 022495          206 KLQAEQYIRKS---GINYTIIRPGGLRNEPPTGN-----------------------IIMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       206 K~~~e~~~~~~---~~~~~~lrp~~i~g~~~~~~-----------------------~~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                      |.++|++++..   ++++++|||+.+||+...+.                       +...........+++++|+|+++
T Consensus       176 K~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  255 (372)
T 3slg_A          176 KQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISAL  255 (372)
T ss_dssp             HHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHH
Confidence            99999999876   99999999999999864320                       11112223334689999999999


Q ss_pred             HHHhcCCC--CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          260 VEALLHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.++..+.  ..+++||++++  +..+++.|+++.+.+
T Consensus       256 ~~~~~~~~~~~~~~~~ni~~~--~~~~s~~e~~~~i~~  291 (372)
T 3slg_A          256 MKIIENSNGVATGKIYNIGNP--NNNFSVRELANKMLE  291 (372)
T ss_dssp             HHHHHCGGGTTTTEEEEECCT--TCEEEHHHHHHHHHH
T ss_pred             HHHHhcccCcCCCceEEeCCC--CCCccHHHHHHHHHH
Confidence            99999875  56789999882  268999999999875

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=3.7e-33  Score=231.29  Aligned_cols=209  Identities=25%  Similarity=0.388  Sum_probs=172.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |+|+||||+|+||++++++|+++|++|++++|++++....     .+++++.+|++|..+++.+++++ +|+||||||..
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~-~d~vi~~ag~~   74 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----NNVKAVHFDVDWTPEEMAKQLHG-MDAIINVSGSG   74 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----TTEEEEECCTTSCHHHHHTTTTT-CSEEEECCCCT
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----CCceEEEecccCCHHHHHHHHcC-CCEEEECCcCC
Confidence            4899999999999999999999999999999998765432     68999999999834789999998 99999999976


Q ss_pred             CCCCC-cchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHH-HHhCCcEEEEe
Q 022495          147 PGWDL-FAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI-RKSGINYTIIR  224 (296)
Q Consensus       147 ~~~~~-~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-~~~~~~~~~lr  224 (296)
                      ..... .......+++++|++.++++||++||.++++..   +..+  .+..+...|+.+|.++|+++ ++.++++++||
T Consensus        75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e--~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilr  149 (219)
T 3dqp_A           75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG--AGFDALKDYYIAKHFADLYLTKETNLDYTIIQ  149 (219)
T ss_dssp             TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS--HHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEE
T ss_pred             CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc--cccccccHHHHHHHHHHHHHHhccCCcEEEEe
Confidence            53221 122223899999999999999999998776543   2222  45667889999999999999 77899999999


Q ss_pred             cCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHh
Q 022495          225 PGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSI  293 (296)
Q Consensus       225 p~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i  293 (296)
                      ||.++|+...+.+...   .....+++++|+|++++.++.++...+++|++.+   + ..+++|+.+.-
T Consensus       150 p~~v~g~~~~~~~~~~---~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~---g-~~~~~e~~~~~  211 (219)
T 3dqp_A          150 PGALTEEEATGLIDIN---DEVSASNTIGDVADTIKELVMTDHSIGKVISMHN---G-KTAIKEALESL  211 (219)
T ss_dssp             ECSEECSCCCSEEEES---SSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEE---C-SEEHHHHHHTT
T ss_pred             CceEecCCCCCccccC---CCcCCcccHHHHHHHHHHHHhCccccCcEEEeCC---C-CccHHHHHHHH
Confidence            9999998766665442   3445789999999999999999877788999988   3 59999998764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=4.4e-34  Score=253.10  Aligned_cols=229  Identities=13%  Similarity=0.131  Sum_probs=178.7

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----cCC----CCCeEEEEcccCCChHHHHHHh
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKD----NPSLQIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~----~~~~~~~~~D~~d~~~~~~~~~  132 (296)
                      .+.+++|+||||||+||||+++++.|+++|++|++++|.........    ...    ..+++++.+|++| .+.+.+++
T Consensus        20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~   98 (351)
T 3ruf_A           20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD-LTTCEQVM   98 (351)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC-HHHHHHHT
T ss_pred             hCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC-HHHHHHHh
Confidence            34567899999999999999999999999999999999765322111    000    0579999999999 89999999


Q ss_pred             cCCCCEEEEcCCCCCCCC----CcchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHH
Q 022495          133 GDDSEAVVCATGFQPGWD----LFAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTL  203 (296)
Q Consensus       133 ~~~~d~vv~~ag~~~~~~----~~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~  203 (296)
                      ++ +|+||||||......    ......  .   .+++++|++.++++|||+||.++|+...+.+.++.. +..+.+.|+
T Consensus        99 ~~-~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~-~~~p~~~Y~  176 (351)
T 3ruf_A           99 KG-VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEEN-IGNPLSPYA  176 (351)
T ss_dssp             TT-CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTC-CCCCCSHHH
T ss_pred             cC-CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCC-CCCCCChhH
Confidence            98 999999999643111    011111  1   899999999999999999999999887665555543 456778899


Q ss_pred             HHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc-------------------eeecccCccccCCcCHHHHHHHHH
Q 022495          204 IAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN-------------------IIMETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       204 ~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~-------------------~~~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                      .+|.++|++++    +.+++++++||+.+||+.....                   +...+.......+++++|+|++++
T Consensus       177 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~  256 (351)
T 3ruf_A          177 VTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNI  256 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHH
Confidence            99999998875    4699999999999999864322                   011122234457999999999999


Q ss_pred             HHhcC-CCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          261 EALLH-PESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       261 ~~l~~-~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .++.. +...+++||+++   +..+++.|+++.+.+
T Consensus       257 ~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~  289 (351)
T 3ruf_A          257 LSALAKDSAKDNIYNVAV---GDRTTLNELSGYIYD  289 (351)
T ss_dssp             HHHTCCGGGCSEEEEESC---SCCEEHHHHHHHHHH
T ss_pred             HHHhhccccCCCEEEeCC---CCcccHHHHHHHHHH
Confidence            99987 456778999998   689999999998865

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=8.4e-33  Score=241.03  Aligned_cols=216  Identities=18%  Similarity=0.170  Sum_probs=172.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +|+||||||+||||+++++.|+++|++|++++|++....  +    .+++++.+|++  .+.+.+++++ +|+|||+|+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~----~~~~~~~~Dl~--~~~~~~~~~~-~d~Vih~a~~   72 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I----NDYEYRVSDYT--LEDLINQLND-VDAVVHLAAT   72 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------CCEEEECCCC--HHHHHHHTTT-CSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C----CceEEEEcccc--HHHHHHhhcC-CCEEEEcccc
Confidence            579999999999999999999999999999999944332  2    37999999998  5889999998 9999999997


Q ss_pred             CCCCCCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH----h
Q 022495          146 QPGWDLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK----S  216 (296)
Q Consensus       146 ~~~~~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~----~  216 (296)
                      ....+.....  +.   .++++++++.++++|||+||..+|+.....+.++.. +..|.+.|+.+|.++|+++++    .
T Consensus        73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~~~  151 (311)
T 3m2p_A           73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKE-LPLPDLMYGVSKLACEHIGNIYSRKK  151 (311)
T ss_dssp             CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTS-CCCCSSHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHHHc
Confidence            6543222222  22   999999999999999999999999977655555543 456678899999999998865    6


Q ss_pred             CCcEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCC
Q 022495          217 GINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDA  281 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~  281 (296)
                      +++++++||+.+||+.....               +...+.......+++++|+|++++.++..+. .+++||+++   +
T Consensus       152 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~---~  227 (311)
T 3m2p_A          152 GLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGS---G  227 (311)
T ss_dssp             CCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECC---S
T ss_pred             CCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCC---C
Confidence            99999999999999865421               1111223344568999999999999999876 678999998   6


Q ss_pred             CCCCHHHHHHHhhc
Q 022495          282 PKRSYEDLFGSIKQ  295 (296)
Q Consensus       282 ~~~~~~el~~~i~~  295 (296)
                      ..+++.|+++.+.+
T Consensus       228 ~~~s~~e~~~~i~~  241 (311)
T 3m2p_A          228 DALTNYEVANTINN  241 (311)
T ss_dssp             CEECHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHH
Confidence            88999999999875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.7e-33  Score=231.76  Aligned_cols=211  Identities=23%  Similarity=0.250  Sum_probs=163.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +|+||||||+||||++++++|+++|++|++++|++++....    ..+++++.+|++| .+.+.+++++ +|+||||||.
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~Dl~d-~~~~~~~~~~-~d~vi~~a~~   77 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE----NEHLKVKKADVSS-LDEVCEVCKG-ADAVISAFNP   77 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC----CTTEEEECCCTTC-HHHHHHHHTT-CSEEEECCCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc----cCceEEEEecCCC-HHHHHHHhcC-CCEEEEeCcC
Confidence            57999999999999999999999999999999998765432    2689999999999 8999999999 9999999986


Q ss_pred             CCCCCCcchhHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH----HhCC
Q 022495          146 QPGWDLFAPWKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR----KSGI  218 (296)
Q Consensus       146 ~~~~~~~~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~~~~  218 (296)
                      ..........+.   .++++++++.++++|||+||.++|....+...  ...+..+.+.|+.+|.++|.+++    +.++
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~--~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~  155 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRL--MDSGEVPENILPGVKALGEFYLNFLMKEKEI  155 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEG--GGTTCSCGGGHHHHHHHHHHHHHTGGGCCSS
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCcc--ccCCcchHHHHHHHHHHHHHHHHHHhhccCc
Confidence            543322222222   99999999999999999999987655433221  12344567889999999996654    4689


Q ss_pred             cEEEEecCcccCCCCCCc-eeecccC----ccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHH
Q 022495          219 NYTIIRPGGLRNEPPTGN-IIMETED----TLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYE  287 (296)
Q Consensus       219 ~~~~lrp~~i~g~~~~~~-~~~~~~~----~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~  287 (296)
                      +++++||+.+||+..... +......    .....+++++|+|++++.++.++...+++|++++   +++.++.
T Consensus       156 ~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~---~~~~~~~  226 (227)
T 3dhn_A          156 DWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGY---LEHHHHH  226 (227)
T ss_dssp             EEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEEC---CSCCC--
T ss_pred             cEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEe---ehhcccC
Confidence            999999999999864422 2211111    1114589999999999999999999999999999   6777765

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=3.7e-33  Score=246.82  Aligned_cols=219  Identities=19%  Similarity=0.145  Sum_probs=169.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ...++|+||||||+||||+++++.|+++|++|++++|++..         .++.++.+|++| .+.+.+++.+ +|+|||
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------~~~~~~~~Dl~d-~~~~~~~~~~-~d~vih   83 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------TGGEEVVGSLED-GQALSDAIMG-VSAVLH   83 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------SCCSEEESCTTC-HHHHHHHHTT-CSEEEE
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------CCccEEecCcCC-HHHHHHHHhC-CCEEEE
Confidence            45678999999999999999999999999999999998754         578899999999 8999999998 999999


Q ss_pred             cCCCCCCCCCcc--hhHH-----HHHHHHHHHcCCCEEEEEccceeccC--ccCccCChhhhhhhhhHHHHHHHHHHHHH
Q 022495          142 ATGFQPGWDLFA--PWKA-----INLVEACRKRGVNRFILISSILVNGA--AMGQILNPAYIFLNVFGLTLIAKLQAEQY  212 (296)
Q Consensus       142 ~ag~~~~~~~~~--~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~--~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  212 (296)
                      +|+.........  ....     .+++++|++.++++|||+||.++|+.  ....+..+. .+..+.+.|+.+|.++|++
T Consensus        84 ~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~-~~~~~~~~Y~~sK~~~E~~  162 (347)
T 4id9_A           84 LGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTED-HPLCPNSPYGLTKLLGEEL  162 (347)
T ss_dssp             CCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTT-SCCCCCSHHHHHHHHHHHH
T ss_pred             CCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCC-CCCCCCChHHHHHHHHHHH
Confidence            999654322211  1111     89999999999999999999999987  333334443 3456678899999999998


Q ss_pred             HH----HhCCcEEEEecCccc-------------CCCCC------------Cc--------------eeecccCccccCC
Q 022495          213 IR----KSGINYTIIRPGGLR-------------NEPPT------------GN--------------IIMETEDTLYEGT  249 (296)
Q Consensus       213 ~~----~~~~~~~~lrp~~i~-------------g~~~~------------~~--------------~~~~~~~~~~~~~  249 (296)
                      ++    +.++++++|||+.+|             |+...            ..              +...+.......+
T Consensus       163 ~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  242 (347)
T 4id9_A          163 VRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPF  242 (347)
T ss_dssp             HHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBC
T ss_pred             HHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCC
Confidence            85    468999999999999             54311            00              1111112223356


Q ss_pred             ----cCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          250 ----ISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       250 ----i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                          ++++|+|++++.++..+...+++||+++   +..+++.|+++.+.+
T Consensus       243 ~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~  289 (347)
T 4id9_A          243 RMHITDTRDMVAGILLALDHPEAAGGTFNLGA---DEPADFAALLPKIAA  289 (347)
T ss_dssp             EECEEEHHHHHHHHHHHHHCGGGTTEEEEESC---SSCEEHHHHHHHHHH
T ss_pred             ccCcEeHHHHHHHHHHHhcCcccCCCeEEECC---CCcccHHHHHHHHHH
Confidence                9999999999999998866678999998   689999999999865

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=8.8e-33  Score=244.28  Aligned_cols=227  Identities=13%  Similarity=0.077  Sum_probs=171.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchh-hhccc--CCCCCeEEEEcccCCChHHHHHHhcC-CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKA-KTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD-DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~-~~  136 (296)
                      .+++|+||||||+||||++|+++|+++|  ++|++++|..... ...+.  ....+++++.+|++| .+.+.+++++ ++
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~   99 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQN-GELLEHVIKERDV   99 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC-HHHHHHHHHHHTC
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCC-HHHHHHHHhhcCC
Confidence            4567899999999999999999999999  7788887764221 11111  123689999999999 8999998875 59


Q ss_pred             CEEEEcCCCCCCCC----CcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCcc-CccCChhhhhhhhhHHHHHHH
Q 022495          137 EAVVCATGFQPGWD----LFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAM-GQILNPAYIFLNVFGLTLIAK  206 (296)
Q Consensus       137 d~vv~~ag~~~~~~----~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~-~~~~~~~~~~~~~~~~y~~sK  206 (296)
                      |+||||||......    .......     .+++++|++.++++|||+||.++|+... ..+.++. .+..|.+.|+.+|
T Consensus       100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~-~~~~p~~~Y~~sK  178 (346)
T 4egb_A          100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEE-TPLAPNSPYSSSK  178 (346)
T ss_dssp             CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTT-SCCCCCSHHHHHH
T ss_pred             CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCC-CCCCCCChhHHHH
Confidence            99999999654221    1111111     8999999999999999999999998763 3333443 3556778899999


Q ss_pred             HHHHHHHHH----hCCcEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          207 LQAEQYIRK----SGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       207 ~~~e~~~~~----~~~~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      .++|++++.    .+++++++||+.+||+.....               +...+.......+++++|+|++++.++..+.
T Consensus       179 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  258 (346)
T 4egb_A          179 ASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR  258 (346)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence            999988864    699999999999999864321               1111223334578999999999999998876


Q ss_pred             CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          268 SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       268 ~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                       .+++||+++   +..+++.|+++.+.+
T Consensus       259 -~g~~~~i~~---~~~~s~~e~~~~i~~  282 (346)
T 4egb_A          259 -VGEVYNIGG---NNEKTNVEVVEQIIT  282 (346)
T ss_dssp             -TTCEEEECC---SCCEEHHHHHHHHHH
T ss_pred             -CCCEEEECC---CCceeHHHHHHHHHH
Confidence             678999998   688999999998875

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=2.5e-32  Score=235.14  Aligned_cols=210  Identities=12%  Similarity=0.109  Sum_probs=170.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ++|+|||||| ||||++++++|+++|++|++++|++.+...+..   .+++++.+|++| .+     +.+ +|+|||+|+
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d-~~-----~~~-~d~vi~~a~   72 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---SGAEPLLWPGEE-PS-----LDG-VTHLLISTA   72 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---TTEEEEESSSSC-CC-----CTT-CCEEEECCC
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---CCCeEEEecccc-cc-----cCC-CCEEEECCC
Confidence            3689999998 999999999999999999999999877654432   579999999999 55     677 999999998


Q ss_pred             CCCCCCCcchhHHHHHHHHHHH--cCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh-CCcEE
Q 022495          145 FQPGWDLFAPWKAINLVEACRK--RGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS-GINYT  221 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~-~~~~~  221 (296)
                      .....    ....+++++++++  .++++|||+||.++|+...+.+.++.. +..+.+.|+.+|+++|+++++. +++++
T Consensus        73 ~~~~~----~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~~~~~  147 (286)
T 3ius_A           73 PDSGG----DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETT-PLTPTAARGRWRVMAEQQWQAVPNLPLH  147 (286)
T ss_dssp             CBTTB----CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTS-CCCCCSHHHHHHHHHHHHHHHSTTCCEE
T ss_pred             ccccc----cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCC-CCCCCCHHHHHHHHHHHHHHhhcCCCEE
Confidence            65432    1233789999998  678999999999999987665555543 4566788999999999999987 99999


Q ss_pred             EEecCcccCCCCCC-------c-eeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHh
Q 022495          222 IIRPGGLRNEPPTG-------N-IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSI  293 (296)
Q Consensus       222 ~lrp~~i~g~~~~~-------~-~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i  293 (296)
                      ++||+++||+....       . ..... ......+++++|+|++++.++..+. .+++||+++   +..+++.|+++.+
T Consensus       148 ilRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~---~~~~s~~e~~~~i  222 (286)
T 3ius_A          148 VFRLAGIYGPGRGPFSKLGKGGIRRIIK-PGQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCD---DEPVPPQDVIAYA  222 (286)
T ss_dssp             EEEECEEEBTTBSSSTTSSSSCCCEEEC-TTCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECC---SCCBCHHHHHHHH
T ss_pred             EEeccceECCCchHHHHHhcCCccccCC-CCcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeC---CCCccHHHHHHHH
Confidence            99999999975321       1 11111 1334578999999999999999877 567999998   6889999999998


Q ss_pred             hc
Q 022495          294 KQ  295 (296)
Q Consensus       294 ~~  295 (296)
                      .+
T Consensus       223 ~~  224 (286)
T 3ius_A          223 AE  224 (286)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=7.7e-33  Score=245.34  Aligned_cols=237  Identities=15%  Similarity=0.130  Sum_probs=179.3

Q ss_pred             CCchhhhhhccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch----hhhcccC----CCCCeEEEEcccCCC
Q 022495           53 EITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK----AKTTLSK----DNPSLQIVKADVTEG  124 (296)
Q Consensus        53 ~~~~~~~~~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~----~~~~~~~~~~D~~d~  124 (296)
                      +...+..+..++++|+||||||+||||++++++|+++|++|++++|+...    ...+...    ...++.++.+|++| 
T Consensus        14 ~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-   92 (352)
T 1sb8_A           14 SRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN-   92 (352)
T ss_dssp             CHHHHHHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS-
T ss_pred             HHHHhhchhcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCC-
Confidence            34444555566788999999999999999999999999999999997642    1111100    02578999999999 


Q ss_pred             hHHHHHHhcCCCCEEEEcCCCCCCC----CCcchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          125 SAKLSEAIGDDSEAVVCATGFQPGW----DLFAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       125 ~~~~~~~~~~~~d~vv~~ag~~~~~----~~~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      .+.+.+++++ +|+||||||.....    +......  .   .++++++++.++++|||+||.++|+...+.+.++.. +
T Consensus        93 ~~~~~~~~~~-~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~-~  170 (352)
T 1sb8_A           93 LDDCNNACAG-VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDT-I  170 (352)
T ss_dssp             HHHHHHHHTT-CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTC-C
T ss_pred             HHHHHHHhcC-CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCC-C
Confidence            8999999998 99999999964311    1111111  1   899999999999999999999999876554444433 3


Q ss_pred             hhhhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc-----e--------------eecccCccccCCcCH
Q 022495          196 LNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN-----I--------------IMETEDTLYEGTISR  252 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~-----~--------------~~~~~~~~~~~~i~~  252 (296)
                      ..+.+.|+.+|.++|.+++    +.++++++|||+.+||+.....     .              ...........++++
T Consensus       171 ~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v  250 (352)
T 1sb8_A          171 GKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYI  250 (352)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEH
Confidence            4567789999999999875    3599999999999999864321     0              011112233468999


Q ss_pred             HHHHHHHHHHhcCC-CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          253 DQVAEVAVEALLHP-ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       253 ~Dva~~i~~~l~~~-~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +|+|++++.++..+ ...+++|++.+   +..+++.|+++.+.+
T Consensus       251 ~Dva~a~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~  291 (352)
T 1sb8_A          251 ENTVQANLLAATAGLDARNQVYNIAV---GGRTSLNQLFFALRD  291 (352)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEEESC---SCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccCCCceEEeCC---CCCccHHHHHHHHHH
Confidence            99999999988763 44678999987   688999999998865

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=1.3e-32  Score=239.67  Aligned_cols=218  Identities=16%  Similarity=0.165  Sum_probs=170.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |+||||||+||||++++++|+++|++|++++|+.....+..   ..+++++.+|++| .+ +.+++++  |+|||||+..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~Dl~d-~~-~~~~~~~--d~vih~A~~~   73 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---NPSAELHVRDLKD-YS-WGAGIKG--DVVFHFAANP   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---CTTSEEECCCTTS-TT-TTTTCCC--SEEEECCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---CCCceEEECcccc-HH-HHhhcCC--CEEEECCCCC
Confidence            58999999999999999999999999999999876654433   3679999999999 67 7777765  9999999954


Q ss_pred             CCCCCcc-h---h--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH--
Q 022495          147 PGWDLFA-P---W--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK--  215 (296)
Q Consensus       147 ~~~~~~~-~---~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~--  215 (296)
                      ....... .   .  +.   .++++++++.++++|||+||.++|+.....+.++. .+..+.+.|+.+|.++|.+++.  
T Consensus        74 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-~~~~p~~~Y~~sK~~~e~~~~~~~  152 (312)
T 3ko8_A           74 EVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEE-EPYKPISVYGAAKAAGEVMCATYA  152 (312)
T ss_dssp             SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-SCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCC-CCCCCCChHHHHHHHHHHHHHHHH
Confidence            3211111 1   1  11   89999999999999999999999998765555554 3556778899999999988753  


Q ss_pred             --hCCcEEEEecCcccCCCCCCce---------------eecccCccccCCcCHHHHHHHHHHHhcC---CCCCCCeEEE
Q 022495          216 --SGINYTIIRPGGLRNEPPTGNI---------------IMETEDTLYEGTISRDQVAEVAVEALLH---PESSYKVVEI  275 (296)
Q Consensus       216 --~~~~~~~lrp~~i~g~~~~~~~---------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~---~~~~~~~~~i  275 (296)
                        .+++++++||+++||+......               ...........+++++|+|++++.++..   +...+.+||+
T Consensus       153 ~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni  232 (312)
T 3ko8_A          153 RLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNV  232 (312)
T ss_dssp             HHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred             HHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEE
Confidence              6999999999999998644321               1112223345689999999999999987   4456678999


Q ss_pred             EeCCCCCCCCHHHHHHHhhc
Q 022495          276 ISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       276 ~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++   +..+++.|+++.+.+
T Consensus       233 ~~---~~~~s~~e~~~~i~~  249 (312)
T 3ko8_A          233 GN---VDAVRVLDIAQIVAE  249 (312)
T ss_dssp             SC---SSCEEHHHHHHHHHH
T ss_pred             cC---CCceeHHHHHHHHHH
Confidence            88   689999999998865

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.2e-31  Score=240.04  Aligned_cols=223  Identities=17%  Similarity=0.076  Sum_probs=171.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +.++|+||||||+||||++++++|+++|++|++++|++.......   ..+++++.+|++| .+.+.+++++ +|+||||
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~v~~~~~Dl~d-~~~~~~~~~~-~d~Vih~  100 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED---MFCDEFHLVDLRV-MENCLKVTEG-VDHVFNL  100 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG---GTCSEEEECCTTS-HHHHHHHHTT-CSEEEEC
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc---cCCceEEECCCCC-HHHHHHHhCC-CCEEEEC
Confidence            335789999999999999999999999999999999876543221   2578999999999 8999999998 9999999


Q ss_pred             CCCCCCC-----CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccC-----ccCChhhh-hhhhhHHHHHHH
Q 022495          143 TGFQPGW-----DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMG-----QILNPAYI-FLNVFGLTLIAK  206 (296)
Q Consensus       143 ag~~~~~-----~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~-----~~~~~~~~-~~~~~~~y~~sK  206 (296)
                      ||.....     +.....  +.   .++++++++.++++|||+||.++|+....     .+.++... +..+.+.|+.+|
T Consensus       101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK  180 (379)
T 2c5a_A          101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEK  180 (379)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHH
T ss_pred             ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHH
Confidence            9965321     111111  11   89999999999999999999999986432     12223221 345567899999


Q ss_pred             HHHHHHHH----HhCCcEEEEecCcccCCCCCCc--------------------eeecccCccccCCcCHHHHHHHHHHH
Q 022495          207 LQAEQYIR----KSGINYTIIRPGGLRNEPPTGN--------------------IIMETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       207 ~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~--------------------~~~~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      .++|.+++    +.++++++|||+.+||+.....                    +...........+++++|+|++++.+
T Consensus       181 ~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~  260 (379)
T 2c5a_A          181 LATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRL  260 (379)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHH
Confidence            99998875    3699999999999999853210                    11111222335689999999999999


Q ss_pred             hcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          263 LLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       263 l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +..+  .+.+||+.+   +..+++.|+++.+.+
T Consensus       261 l~~~--~~~~~ni~~---~~~~s~~e~~~~i~~  288 (379)
T 2c5a_A          261 TKSD--FREPVNIGS---DEMVSMNEMAEMVLS  288 (379)
T ss_dssp             HHSS--CCSCEEECC---CCCEEHHHHHHHHHH
T ss_pred             hhcc--CCCeEEeCC---CCccCHHHHHHHHHH
Confidence            9876  456899988   689999999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.6e-32  Score=239.79  Aligned_cols=218  Identities=17%  Similarity=0.148  Sum_probs=166.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +|+||||||+||||++++++|+++|++|++++|++.+...+.   ..+++++.+|++| .+.+.+++++ +|+||||||.
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~Dl~d-~~~~~~~~~~-~d~vih~a~~   87 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA---YLEPECRVAEMLD-HAGLERALRG-LDGVIFSAGY   87 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG---GGCCEEEECCTTC-HHHHHHHTTT-CSEEEEC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc---cCCeEEEEecCCC-HHHHHHHHcC-CCEEEECCcc
Confidence            469999999999999999999999999999999877654332   1478999999999 8999999999 9999999996


Q ss_pred             CCCC--CCcch--hHH---HHHHHHHHHcCCCEEEEEccceeccCccC--ccCChhhhhhhh----hHHHHHHHHHHHHH
Q 022495          146 QPGW--DLFAP--WKA---INLVEACRKRGVNRFILISSILVNGAAMG--QILNPAYIFLNV----FGLTLIAKLQAEQY  212 (296)
Q Consensus       146 ~~~~--~~~~~--~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~--~~~~~~~~~~~~----~~~y~~sK~~~e~~  212 (296)
                      ...+  +....  .+.   .++++++++.++++|||+||.++|+...+  .+ ++ ..+..|    .+.|+.+|+++|.+
T Consensus        88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E-~~~~~p~~~~~~~Y~~sK~~~e~~  165 (342)
T 2x4g_A           88 YPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HE-GLFYDSLPSGKSSYVLCKWALDEQ  165 (342)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CT-TCCCSSCCTTSCHHHHHHHHHHHH
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CC-CCCCCccccccChHHHHHHHHHHH
Confidence            4421  11111  122   89999999999999999999999986544  22 33 334455    77899999999998


Q ss_pred             HHH---hCCcEEEEecCcccCCCC-C-C--cee---eccc----CccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeC
Q 022495          213 IRK---SGINYTIIRPGGLRNEPP-T-G--NII---METE----DTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR  278 (296)
Q Consensus       213 ~~~---~~~~~~~lrp~~i~g~~~-~-~--~~~---~~~~----~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~  278 (296)
                      ++.   .++++++|||+.+||+.. . +  .+.   ....    ......+++++|+|++++.++..+.. +++|++.+ 
T Consensus       166 ~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~~v~~-  243 (342)
T 2x4g_A          166 AREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRI-GERYLLTG-  243 (342)
T ss_dssp             HHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCT-TCEEEECC-
T ss_pred             HHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCC-CceEEEcC-
Confidence            865   389999999999999865 2 1  110   0010    11234589999999999999987664 78999988 


Q ss_pred             CCCCCCCHHHHHHHhhc
Q 022495          279 VDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       279 ~~~~~~~~~el~~~i~~  295 (296)
                        +. +++.|+++.+.+
T Consensus       244 --~~-~s~~e~~~~i~~  257 (342)
T 2x4g_A          244 --HN-LEMADLTRRIAE  257 (342)
T ss_dssp             --EE-EEHHHHHHHHHH
T ss_pred             --Cc-ccHHHHHHHHHH
Confidence              57 999999998864

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-32  Score=242.49  Aligned_cols=225  Identities=18%  Similarity=0.208  Sum_probs=172.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHHHHHHhc--CCCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIG--DDSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d~  138 (296)
                      ++|+||||||+||||+++++.|+++|++|++++|+.....+...    ....++.++.+|++| .+.+.++++  + +|+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~-~d~   81 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD-ERALARIFDAHP-ITA   81 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTC-HHHHHHHHHHSC-CCE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCC-HHHHHHHHhccC-CcE
Confidence            36799999999999999999999999999999998765432211    013578999999999 899999988  6 999


Q ss_pred             EEEcCCCCCCCCC----cchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHH
Q 022495          139 VVCATGFQPGWDL----FAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       139 vv~~ag~~~~~~~----~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~  209 (296)
                      ||||||.......    ...+  +.   .+++++|++.++++|||+||.++|+.....+.++.. +..+.+.|+.+|.++
T Consensus        82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~-~~~~~~~Y~~sK~~~  160 (341)
T 3enk_A           82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETF-PLSATNPYGQTKLMA  160 (341)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTS-CCBCSSHHHHHHHHH
T ss_pred             EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCC-CCCCCChhHHHHHHH
Confidence            9999997532110    0111  11   899999999999999999999999876655555543 455678899999999


Q ss_pred             HHHHHH----h-CCcEEEEecCcccCCCCCC-----------ce---------------eecc------cCccccCCcCH
Q 022495          210 EQYIRK----S-GINYTIIRPGGLRNEPPTG-----------NI---------------IMET------EDTLYEGTISR  252 (296)
Q Consensus       210 e~~~~~----~-~~~~~~lrp~~i~g~~~~~-----------~~---------------~~~~------~~~~~~~~i~~  252 (296)
                      |.+++.    . +++++++||+.+||+...+           .+               ...+      .......++|+
T Consensus       161 e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  240 (341)
T 3enk_A          161 EQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHV  240 (341)
T ss_dssp             HHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred             HHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEH
Confidence            998864    2 4999999999999974321           00               0001      12233468999


Q ss_pred             HHHHHHHHHHhcCC--CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          253 DQVAEVAVEALLHP--ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       253 ~Dva~~i~~~l~~~--~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +|+|++++.++..+  ...+++||+++   ++.+++.|+++.+.+
T Consensus       241 ~Dva~a~~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~  282 (341)
T 3enk_A          241 VDLARGHIAALDALERRDASLTVNLGT---GRGYSVLEVVRAFEK  282 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCEEEEESC---SCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCcceEEEeCC---CCceeHHHHHHHHHH
Confidence            99999999999862  34578999988   689999999998865

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.1e-31  Score=238.77  Aligned_cols=223  Identities=13%  Similarity=0.067  Sum_probs=171.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHH--CCCeEEEEEcCcchh----------hhcccCCCCCeEEEEcccCCChHHHHH
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLA--KGFAVKAGVRDLDKA----------KTTLSKDNPSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~--~g~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~d~~~~~~~  130 (296)
                      ++++|+||||||+||||+++++.|++  +|++|++++|.....          .........++.++.+|++| .+.+.+
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~   85 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINN-PLDLRR   85 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTC-HHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCC-HHHHHH
Confidence            56789999999999999999999999  999999999976410          01111133578999999999 899999


Q ss_pred             H-hcCCCCEEEEcCCCCCCCC--CcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          131 A-IGDDSEAVVCATGFQPGWD--LFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       131 ~-~~~~~d~vv~~ag~~~~~~--~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      + ..+ +|+||||||......  .......     .++++++++.+++ |||+||.++|+.... +.+++. +..|.+.|
T Consensus        86 ~~~~~-~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~-~~~p~~~Y  161 (362)
T 3sxp_A           86 LEKLH-FDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGK-NESPENVY  161 (362)
T ss_dssp             HTTSC-CSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTS-CCCCSSHH
T ss_pred             hhccC-CCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCC-CCCCCChh
Confidence            8 777 999999999654211  1111111     8999999999875 999999999987655 444433 56677889


Q ss_pred             HHHHHHHHHHHHHhC--CcEEEEecCcccCCCCCCc-------------------eeecccCccccCCcCHHHHHHHHHH
Q 022495          203 LIAKLQAEQYIRKSG--INYTIIRPGGLRNEPPTGN-------------------IIMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       203 ~~sK~~~e~~~~~~~--~~~~~lrp~~i~g~~~~~~-------------------~~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      +.+|.++|.+++...  +++++|||+.+||+.....                   +...........+++++|+|++++.
T Consensus       162 ~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~  241 (362)
T 3sxp_A          162 GFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVK  241 (362)
T ss_dssp             HHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHH
Confidence            999999999998765  8899999999999864321                   0111122233568999999999999


Q ss_pred             HhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          262 ALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       262 ~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++..+. .+ +||+++   +..+++.|+++.+.+
T Consensus       242 ~~~~~~-~g-~~~i~~---~~~~s~~e~~~~i~~  270 (362)
T 3sxp_A          242 AMKAQK-SG-VYNVGY---SQARSYNEIVSILKE  270 (362)
T ss_dssp             HTTCSS-CE-EEEESC---SCEEEHHHHHHHHHH
T ss_pred             HHhcCC-CC-EEEeCC---CCCccHHHHHHHHHH
Confidence            998765 45 999988   688999999999875

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=7.5e-32  Score=235.15  Aligned_cols=218  Identities=18%  Similarity=0.180  Sum_probs=164.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      ||+||||||+||||++++++|+++| .|+++++......+..   ..++.++.+|++|  +.+.+++++ +|+|||+|+.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~---~~~~~~~~~Dl~~--~~~~~~~~~-~d~vih~a~~   73 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV---NEAARLVKADLAA--DDIKDYLKG-AEEVWHIAAN   73 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS---CTTEEEECCCTTT--SCCHHHHTT-CSEEEECCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc---CCCcEEEECcCCh--HHHHHHhcC-CCEEEECCCC
Confidence            4689999999999999999999999 5555555433322222   3679999999998  567888888 9999999985


Q ss_pred             CCCC-CCcch---h--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH--
Q 022495          146 QPGW-DLFAP---W--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR--  214 (296)
Q Consensus       146 ~~~~-~~~~~---~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~--  214 (296)
                      .... .....   .  +.   .+++++|++.++++|||+||.++|+.....+.++.. +..+.+.|+.+|.++|.+++  
T Consensus        74 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~-~~~~~~~Y~~sK~~~e~~~~~~  152 (313)
T 3ehe_A           74 PDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDY-PTHPISLYGASKLACEALIESY  152 (313)
T ss_dssp             CCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTS-CCCCCSHHHHHHHHHHHHHHHH
T ss_pred             CChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHH
Confidence            4321 11111   1  11   889999999999999999999999977655555433 55667889999999998875  


Q ss_pred             --HhCCcEEEEecCcccCCCCCCce---------------eecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          215 --KSGINYTIIRPGGLRNEPPTGNI---------------IMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       215 --~~~~~~~~lrp~~i~g~~~~~~~---------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                        +.+++++++||+.+||+......               ...........+++++|+|++++.++.. ...+++||+++
T Consensus       153 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~ni~~  231 (313)
T 3ehe_A          153 CHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG-DERVNIFNIGS  231 (313)
T ss_dssp             HHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC-CSSEEEEECCC
T ss_pred             HHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc-CCCCceEEECC
Confidence              36999999999999998644211               1122233445799999999999999984 34567899888


Q ss_pred             CCCCCCCCHHHHHHHhhc
Q 022495          278 RVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       278 ~~~~~~~~~~el~~~i~~  295 (296)
                         ++.+++.|+++.+.+
T Consensus       232 ---~~~~s~~e~~~~i~~  246 (313)
T 3ehe_A          232 ---EDQIKVKRIAEIVCE  246 (313)
T ss_dssp             ---SCCEEHHHHHHHHHH
T ss_pred             ---CCCeeHHHHHHHHHH
Confidence               789999999999875

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.4e-31  Score=235.36  Aligned_cols=222  Identities=17%  Similarity=0.213  Sum_probs=172.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--CCCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d~v  139 (296)
                      .++++|+||||||+||||++++++|+++|++|++++|+.....+... ...++.++.+|++| .+.+.++++  + +|+|
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~l~~v~~~~~Dl~d-~~~~~~~~~~~~-~D~v   92 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP-PVAGLSVIEGSVTD-AGLLERAFDSFK-PTHV   92 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC-SCTTEEEEECCTTC-HHHHHHHHHHHC-CSEE
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh-ccCCceEEEeeCCC-HHHHHHHHhhcC-CCEE
Confidence            46678999999999999999999999999999999997654332221 12578999999999 899999998  7 9999


Q ss_pred             EEcCCCCCCCCCcch-hHH-----HHHHHHHHHcCCCEEEEEccceeccCccCc--cCChhhhhhhhhHHHHHHHHHHHH
Q 022495          140 VCATGFQPGWDLFAP-WKA-----INLVEACRKRGVNRFILISSILVNGAAMGQ--ILNPAYIFLNVFGLTLIAKLQAEQ  211 (296)
Q Consensus       140 v~~ag~~~~~~~~~~-~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~--~~~~~~~~~~~~~~y~~sK~~~e~  211 (296)
                      |||||.......... ...     .++++++.+.++++||++||.++|+.....  +.++..   .+.+.|+.+|+++|.
T Consensus        93 ih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~---~~~~~Y~~sK~~~e~  169 (330)
T 2pzm_A           93 VHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT---APFTSYGISKTAGEA  169 (330)
T ss_dssp             EECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC---CCCSHHHHHHHHHHH
T ss_pred             EECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC---CCCChHHHHHHHHHH
Confidence            999997543111111 111     899999999899999999999999865332  333332   456789999999999


Q ss_pred             HHHHhCCcEEEEecCcccCCCCCCcee------------ecccCccccCCcCHHHHHH-HHHHHhcCCCCCCCeEEEEeC
Q 022495          212 YIRKSGINYTIIRPGGLRNEPPTGNII------------METEDTLYEGTISRDQVAE-VAVEALLHPESSYKVVEIISR  278 (296)
Q Consensus       212 ~~~~~~~~~~~lrp~~i~g~~~~~~~~------------~~~~~~~~~~~i~~~Dva~-~i~~~l~~~~~~~~~~~i~~~  278 (296)
                      +++..++++++|||+++||+.....+.            ...... ...+++++|+|+ +++.++..+.  +++|++.+ 
T Consensus       170 ~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~-  245 (330)
T 2pzm_A          170 FLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVST-  245 (330)
T ss_dssp             HHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESC-
T ss_pred             HHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCC-
Confidence            998889999999999999986421211            001111 456899999999 9999988754  77999987 


Q ss_pred             CCCCCCCHHHHHHHhhc
Q 022495          279 VDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       279 ~~~~~~~~~el~~~i~~  295 (296)
                        +..+++.|+++.+.+
T Consensus       246 --~~~~s~~e~~~~i~~  260 (330)
T 2pzm_A          246 --GEGHSIKEVFDVVLD  260 (330)
T ss_dssp             --SCCEEHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHH
Confidence              688999999998865

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.98  E-value=1.8e-30  Score=212.47  Aligned_cols=198  Identities=20%  Similarity=0.267  Sum_probs=157.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +|+|+||||+|+||++++++|+++|++|++++|++++.....   ..+++++.+|++| .+.+.+++++ +|+||||||.
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~-~~~~~~~~~~-~d~vi~~a~~   77 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG---PRPAHVVVGDVLQ-AADVDKTVAG-QDAVIVLLGT   77 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS---CCCSEEEESCTTS-HHHHHHHHTT-CSEEEECCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc---CCceEEEEecCCC-HHHHHHHHcC-CCEEEECccC
Confidence            479999999999999999999999999999999987654321   3679999999999 8999999999 9999999996


Q ss_pred             CCCCCCcch--hHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEE
Q 022495          146 QPGWDLFAP--WKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTII  223 (296)
Q Consensus       146 ~~~~~~~~~--~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~l  223 (296)
                      ....+....  ....++++++++.++++||++||.++|+.....+        .+...|+.+|.++|+++++.++++++|
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~--------~~~~~y~~~K~~~e~~~~~~~i~~~~l  149 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP--------PRLQAVTDDHIRMHKVLRESGLKYVAV  149 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC--------GGGHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc--------ccchhHHHHHHHHHHHHHhCCCCEEEE
Confidence            543222111  1128999999999999999999999887543211        146789999999999999999999999


Q ss_pred             ecCcccCCCCCCceeecccCccc-cCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          224 RPGGLRNEPPTGNIIMETEDTLY-EGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       224 rp~~i~g~~~~~~~~~~~~~~~~-~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      ||+.+......+.+..... ... ..+++++|+|++++.++.++...+++|++.+
T Consensus       150 rp~~~~~~~~~~~~~~~~~-~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  203 (206)
T 1hdo_A          150 MPPHIGDQPLTGAYTVTLD-GRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (206)
T ss_dssp             CCSEEECCCCCSCCEEESS-SCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             eCCcccCCCCCcceEeccc-CCCCCCccCHHHHHHHHHHHhcCccccccceeeec
Confidence            9999843332333222111 111 4689999999999999998877788999987

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.98  E-value=6.8e-32  Score=223.53  Aligned_cols=210  Identities=19%  Similarity=0.197  Sum_probs=145.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |+||||||+|+||++++++|+++|++|++++|++++...+.    .+++++.+|++| .+.  +++.+ +|+||||||..
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~D~~d-~~~--~~~~~-~d~vi~~ag~~   72 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----KDINILQKDIFD-LTL--SDLSD-QNVVVDAYGIS   72 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----SSSEEEECCGGG-CCH--HHHTT-CSEEEECCCSS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----CCCeEEeccccC-hhh--hhhcC-CCEEEECCcCC
Confidence            57999999999999999999999999999999988766543    679999999999 666  77888 99999999975


Q ss_pred             CCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH--HH--HhCCcEEE
Q 022495          147 PGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY--IR--KSGINYTI  222 (296)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~--~~--~~~~~~~~  222 (296)
                      ...........++++++|++.+++++|++||..+|....+.....+..+..+...|+.+|...|.+  ++  +.++++++
T Consensus        73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~i  152 (221)
T 3ew7_A           73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTY  152 (221)
T ss_dssp             TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEE
T ss_pred             ccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEE
Confidence            433222222339999999999889999999997754433321222222344556688999999876  55  68999999


Q ss_pred             EecCcccCCCCC-Cceeeccc----CccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHH
Q 022495          223 IRPGGLRNEPPT-GNIIMETE----DTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYE  287 (296)
Q Consensus       223 lrp~~i~g~~~~-~~~~~~~~----~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~  287 (296)
                      |||+.++|+... +.+.....    ......+++++|+|++++.++.++...+++|++.+   +.+.+.+
T Consensus       153 vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~---~~~~~~~  219 (221)
T 3ew7_A          153 ISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAG---KLEHHHH  219 (221)
T ss_dssp             EECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC----------
T ss_pred             EeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECC---CCccccc
Confidence            999999997321 21111110    01113589999999999999999998899999998   4544443

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.98  E-value=6.3e-32  Score=241.70  Aligned_cols=225  Identities=18%  Similarity=0.160  Sum_probs=165.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .+++|+||||||+||||++++++|+++| ++|++++|+.....+.+. ...+++++.+|++| .+.+.+++++ +|+|||
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~-~~~~v~~~~~Dl~d-~~~l~~~~~~-~d~Vih  105 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-DHPAVRFSETSITD-DALLASLQDE-YDYVFH  105 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC-CCTTEEEECSCTTC-HHHHHHCCSC-CSEEEE
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc-CCCceEEEECCCCC-HHHHHHHhhC-CCEEEE
Confidence            3567899999999999999999999999 999999998755332221 24679999999999 8999999998 999999


Q ss_pred             cCCCCCCC----CCcchhH-----HHHHHHHHHHc-CCCEEEEEccceeccCccCccCC--hhhh--hh-hhhHHHHHHH
Q 022495          142 ATGFQPGW----DLFAPWK-----AINLVEACRKR-GVNRFILISSILVNGAAMGQILN--PAYI--FL-NVFGLTLIAK  206 (296)
Q Consensus       142 ~ag~~~~~----~~~~~~~-----~~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~~~~--~~~~--~~-~~~~~y~~sK  206 (296)
                      |||.....    +......     ..+++++|++. ++++|||+||.++|+...+.+.+  +...  +. .+.+.|+.+|
T Consensus       106 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK  185 (377)
T 2q1s_A          106 LATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSK  185 (377)
T ss_dssp             CCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHH
T ss_pred             CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHH
Confidence            99965321    1111111     18999999998 88999999999999875443333  3221  23 5567899999


Q ss_pred             HHHHHHHHH----hCCcEEEEecCcccCCCC---------CC-----cee--------------ecccCccccCCcCHHH
Q 022495          207 LQAEQYIRK----SGINYTIIRPGGLRNEPP---------TG-----NII--------------METEDTLYEGTISRDQ  254 (296)
Q Consensus       207 ~~~e~~~~~----~~~~~~~lrp~~i~g~~~---------~~-----~~~--------------~~~~~~~~~~~i~~~D  254 (296)
                      .++|.+++.    .++++++|||+.+||+..         ..     ...              ..........+++++|
T Consensus       186 ~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~D  265 (377)
T 2q1s_A          186 IFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVED  265 (377)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHH
Confidence            999998864    599999999999999865         21     110              0111123346899999


Q ss_pred             HHHH-HHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          255 VAEV-AVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       255 va~~-i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +|++ ++.++..+. .+ +|++.+   ++.+++.|+++.+.+
T Consensus       266 va~a~i~~~~~~~~-~g-~~~i~~---~~~~s~~e~~~~i~~  302 (377)
T 2q1s_A          266 VANGLIACAADGTP-GG-VYNIAS---GKETSIADLATKINE  302 (377)
T ss_dssp             HHHHHHHHHHHCCT-TE-EEECCC---CCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCC-CC-eEEecC---CCceeHHHHHHHHHH
Confidence            9999 999998765 56 898887   688999999998875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.98  E-value=1.1e-31  Score=235.57  Aligned_cols=221  Identities=16%  Similarity=0.228  Sum_probs=168.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--CCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d~vv~~a  143 (296)
                      ||+||||||+||||++++++|+++|++|++++|......+.+.   .+++++.+|++| .+.+.++++  + +|+|||+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~-~d~vih~a   75 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT---EGAKFYNGDLRD-KAFLRDVFTQEN-IEAVMHFA   75 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC---TTSEEEECCTTC-HHHHHHHHHHSC-EEEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcC---CCcEEEECCCCC-HHHHHHHHhhcC-CCEEEECC
Confidence            4789999999999999999999999999999997654333222   378999999999 899999998  7 99999999


Q ss_pred             CCCCCC----CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH
Q 022495          144 GFQPGW----DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR  214 (296)
Q Consensus       144 g~~~~~----~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  214 (296)
                      |.....    +.....  +.   .+++++|++.++++|||+||.++|+.....+.++.. +..+.+.|+.+|.++|.+++
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~-~~~~~~~Y~~sK~~~e~~~~  154 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEET-MTNPTNTYGETKLAIEKMLH  154 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTS-CCCCSSHHHHHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCC-CCCCCChHHHHHHHHHHHHH
Confidence            965321    111111  11   899999999999999999999999876544444443 34567889999999999886


Q ss_pred             H----hCCcEEEEecCcccCCCCCC----------cee-------ecc--------------cCccccCCcCHHHHHHHH
Q 022495          215 K----SGINYTIIRPGGLRNEPPTG----------NII-------MET--------------EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       215 ~----~~~~~~~lrp~~i~g~~~~~----------~~~-------~~~--------------~~~~~~~~i~~~Dva~~i  259 (296)
                      .    .+++++++||+.+||+...+          .+.       ...              .......+++++|+|+++
T Consensus       155 ~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~  234 (330)
T 2c20_A          155 WYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAH  234 (330)
T ss_dssp             HHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHH
T ss_pred             HHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHH
Confidence            4    48999999999999985211          100       000              112234689999999999


Q ss_pred             HHHhcCCCC--CCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          260 VEALLHPES--SYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       260 ~~~l~~~~~--~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.+++.+..  .+++||+++   +..+++.|+++.+.+
T Consensus       235 ~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~  269 (330)
T 2c20_A          235 FLGLKDLQNGGESDFYNLGN---GNGFSVKEIVDAVRE  269 (330)
T ss_dssp             HHHHHHHHTTCCCEEEECCC---TTCBCHHHHHHHHHH
T ss_pred             HHHHhccccCCCCCeEEeCC---CCCccHHHHHHHHHH
Confidence            999976432  357899887   688999999998865

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.98  E-value=5.7e-33  Score=239.29  Aligned_cols=216  Identities=19%  Similarity=0.160  Sum_probs=171.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ++|+||||| +||||++|++.|+++|++|++++|++++.       ..+++++.+|++| .+.+.+++++++|+|||+|+
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~Dl~d-~~~~~~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------PAGVQTLIADVTR-PDTLASIVHLRPEILVYCVA   72 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------CTTCCEEECCTTC-GGGCTTGGGGCCSEEEECHH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------ccCCceEEccCCC-hHHHHHhhcCCCCEEEEeCC
Confidence            468999999 59999999999999999999999987652       3689999999999 88888888655999999998


Q ss_pred             CCCCC-CCc---chhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcE
Q 022495          145 FQPGW-DLF---APWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINY  220 (296)
Q Consensus       145 ~~~~~-~~~---~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~  220 (296)
                      ..... ...   ......+++++|++.++++|||+||.++|+...+.+.++.. +..|.+.|+.+|.++|++ ++. +++
T Consensus        73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~-~~~p~~~Y~~sK~~~E~~-~~~-~~~  149 (286)
T 3gpi_A           73 ASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDT-PPIAKDFSGKRMLEAEAL-LAA-YSS  149 (286)
T ss_dssp             HHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTS-CCCCCSHHHHHHHHHHHH-GGG-SSE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCC-CCCCCChhhHHHHHHHHH-Hhc-CCe
Confidence            53211 111   11222999999999999999999999999987665555543 456678899999999999 777 999


Q ss_pred             EEEecCcccCCCCCCce---e---ecccCccccCCcCHHHHHHHHHHHhcCC--CCCCCeEEEEeCCCCCCCCHHHHHHH
Q 022495          221 TIIRPGGLRNEPPTGNI---I---METEDTLYEGTISRDQVAEVAVEALLHP--ESSYKVVEIISRVDAPKRSYEDLFGS  292 (296)
Q Consensus       221 ~~lrp~~i~g~~~~~~~---~---~~~~~~~~~~~i~~~Dva~~i~~~l~~~--~~~~~~~~i~~~~~~~~~~~~el~~~  292 (296)
                      +++||+.+||+.....+   .   ..........+++++|+|++++.++..+  ...+.+|++.+   ++.+++.|+++.
T Consensus       150 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~e~~~~  226 (286)
T 3gpi_A          150 TILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTD---NQPLPVHDLLRW  226 (286)
T ss_dssp             EEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECC---SCCEEHHHHHHH
T ss_pred             EEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeC---CCCCCHHHHHHH
Confidence            99999999998643111   0   0122233456899999999999999875  45678999988   688999999999


Q ss_pred             hhc
Q 022495          293 IKQ  295 (296)
Q Consensus       293 i~~  295 (296)
                      +.+
T Consensus       227 i~~  229 (286)
T 3gpi_A          227 LAD  229 (286)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.98  E-value=4.5e-31  Score=222.85  Aligned_cols=216  Identities=27%  Similarity=0.389  Sum_probs=167.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++|+|+||||+|+||++++++|+++  |++|++++|++++...+    ..++.++.+|++| .+.+.+++++ +|+||||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~D~~d-~~~~~~~~~~-~d~vi~~   76 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----GGEADVFIGDITD-ADSINPAFQG-IDALVIL   76 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----TCCTTEEECCTTS-HHHHHHHHTT-CSEEEEC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc----CCCeeEEEecCCC-HHHHHHHHcC-CCEEEEe
Confidence            5789999999999999999999999  89999999998765543    3578899999999 8999999999 9999999


Q ss_pred             CCCCCCC----------CCcc-------hhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh-
Q 022495          143 TGFQPGW----------DLFA-------PWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF-  199 (296)
Q Consensus       143 ag~~~~~----------~~~~-------~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~-  199 (296)
                      ||.....          ....       ...     ..++++++++.++++||++||..++....         +..++ 
T Consensus        77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~---------~~~~~~  147 (253)
T 1xq6_A           77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH---------PLNKLG  147 (253)
T ss_dssp             CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC---------GGGGGG
T ss_pred             ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCC---------cccccc
Confidence            9864311          0110       011     18999999999999999999997653211         12222 


Q ss_pred             -HHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCCCc-eeecccCcc---ccCCcCHHHHHHHHHHHhcCCCCCCCeEE
Q 022495          200 -GLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGN-IIMETEDTL---YEGTISRDQVAEVAVEALLHPESSYKVVE  274 (296)
Q Consensus       200 -~~y~~sK~~~e~~~~~~~~~~~~lrp~~i~g~~~~~~-~~~~~~~~~---~~~~i~~~Dva~~i~~~l~~~~~~~~~~~  274 (296)
                       +.|..+|.++|.++++.++++++||||.++|+..... .........   ...+++++|+|++++.++.++...+++|+
T Consensus       148 ~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~  227 (253)
T 1xq6_A          148 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFD  227 (253)
T ss_dssp             GCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEE
T ss_pred             chhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccccCCEEE
Confidence             3488999999999999999999999999999764321 211111111   13479999999999999998766678999


Q ss_pred             EEeCCCCCCCCHHHHHHHhhc
Q 022495          275 IISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       275 i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.+++.+..+++.|+++.+++
T Consensus       228 i~~~~~~~~~s~~e~~~~~~~  248 (253)
T 1xq6_A          228 LGSKPEGTSTPTKDFKALFSQ  248 (253)
T ss_dssp             EEECCTTTSCCCCCHHHHHHT
T ss_pred             ecCCCcCCCCCHHHHHHHHHH
Confidence            998543457999999999876

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.98  E-value=4.1e-31  Score=233.26  Aligned_cols=222  Identities=15%  Similarity=0.197  Sum_probs=168.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      |+||||||+||||++++++|+++ |++|++++|+..+.....  ...+++++.+|++|+.+.+.+++++ +|+||||||.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~-~d~vih~A~~   77 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--NHPHFHFVEGDISIHSEWIEYHVKK-CDVVLPLVAI   77 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--TCTTEEEEECCTTTCSHHHHHHHHH-CSEEEECBCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh--cCCCeEEEeccccCcHHHHHhhccC-CCEEEEcccc
Confidence            58999999999999999999998 899999999987665443  2357999999999833568888888 9999999986


Q ss_pred             CCCC----CCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh------hhhhhHHHHHHHHHHH
Q 022495          146 QPGW----DLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI------FLNVFGLTLIAKLQAE  210 (296)
Q Consensus       146 ~~~~----~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~------~~~~~~~y~~sK~~~e  210 (296)
                      ....    +......     ..++++++++.+ ++|||+||.++|+...+.+.++...      ...+.+.|+.+|.++|
T Consensus        78 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e  156 (345)
T 2bll_A           78 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  156 (345)
T ss_dssp             CCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred             cCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHH
Confidence            5321    1111111     178999999988 8999999999998765544444321      1145668999999999


Q ss_pred             HHHH----HhCCcEEEEecCcccCCCCCC---------c--------------eeecccCccccCCcCHHHHHHHHHHHh
Q 022495          211 QYIR----KSGINYTIIRPGGLRNEPPTG---------N--------------IIMETEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       211 ~~~~----~~~~~~~~lrp~~i~g~~~~~---------~--------------~~~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      .+++    +.+++++++||+.+||+....         .              +...........+++++|+|++++.++
T Consensus       157 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  236 (345)
T 2bll_A          157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII  236 (345)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHH
Confidence            8875    469999999999999986431         0              001111223346899999999999999


Q ss_pred             cCCC--CCCCeEEEEeCCCCC-CCCHHHHHHHhhc
Q 022495          264 LHPE--SSYKVVEIISRVDAP-KRSYEDLFGSIKQ  295 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~~~~~~-~~~~~el~~~i~~  295 (296)
                      ..+.  ..+++|++.+   +. .+++.|+++.+.+
T Consensus       237 ~~~~~~~~g~~~~i~~---~~~~~s~~e~~~~i~~  268 (345)
T 2bll_A          237 ENAGNRCDGEIINIGN---PENEASIEELGEMLLA  268 (345)
T ss_dssp             HCGGGTTTTEEEEECC---TTSEEEHHHHHHHHHH
T ss_pred             hhccccCCCceEEeCC---CCCCCCHHHHHHHHHH
Confidence            8764  4577999987   55 7999999998864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.98  E-value=1.8e-31  Score=233.34  Aligned_cols=218  Identities=13%  Similarity=0.131  Sum_probs=167.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~a  143 (296)
                      +.|+||||||+||||++++++|+++|++|++++|++.. ..      .++.++.+|++| .+.+.+++++ ++|+|||||
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~------l~~~~~~~Dl~d-~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL------PNVEMISLDIMD-SQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC------TTEEEEECCTTC-HHHHHHHHHHHCCSEEEECC
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc------ceeeEEECCCCC-HHHHHHHHHhcCCCEEEEcC
Confidence            46899999999999999999999999999999998764 21      178999999999 8999988864 599999999


Q ss_pred             CCCCCC----CCcchh--HH---HHHHHHHHHc-CCCEEEEEccceeccCc--cCccCChhhhhhhhhHHHHHHHHHHHH
Q 022495          144 GFQPGW----DLFAPW--KA---INLVEACRKR-GVNRFILISSILVNGAA--MGQILNPAYIFLNVFGLTLIAKLQAEQ  211 (296)
Q Consensus       144 g~~~~~----~~~~~~--~~---~~~l~~~~~~-~~~~iV~~SS~~~~~~~--~~~~~~~~~~~~~~~~~y~~sK~~~e~  211 (296)
                      |.....    +.....  +.   .++++++++. ++++|||+||.++|+..  ...+.++.. +..+.+.|+.+|+++|.
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~-~~~~~~~Y~~sK~~~E~  161 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEEN-QLRPMSPYGVSKASVGM  161 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTS-CCBCCSHHHHHHHHHHH
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCC-CCCCCCccHHHHHHHHH
Confidence            975411    111111  11   8899999776 58899999999999865  333444432 44567789999999999


Q ss_pred             HHHH----hCCcEEEEecCcccCCCCCCce--------------------eecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          212 YIRK----SGINYTIIRPGGLRNEPPTGNI--------------------IMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       212 ~~~~----~~~~~~~lrp~~i~g~~~~~~~--------------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +++.    .+++++++||+++||+......                    ...........+++++|+|++++.++..+ 
T Consensus       162 ~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-  240 (321)
T 2pk3_A          162 LARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG-  240 (321)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC-
Confidence            8864    4999999999999998654210                    01111122345899999999999999876 


Q ss_pred             CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          268 SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       268 ~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ..+++|++.+   +..+++.|+++.+.+
T Consensus       241 ~~g~~~~i~~---~~~~s~~e~~~~i~~  265 (321)
T 2pk3_A          241 KTGDVYNVCS---GIGTRIQDVLDLLLA  265 (321)
T ss_dssp             CTTCEEEESC---SCEEEHHHHHHHHHH
T ss_pred             CCCCeEEeCC---CCCeeHHHHHHHHHH
Confidence            3567999987   688999999998875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=9.7e-31  Score=217.20  Aligned_cols=202  Identities=21%  Similarity=0.167  Sum_probs=154.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |+||||||+||||++++++|+++|++|++++|++++...+..   .+++++.+|++| .+.  +++.+ +|+||||||..
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~D~~d-~~~--~~~~~-~d~vi~~ag~~   73 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG---ATVATLVKEPLV-LTE--ADLDS-VDAVVDALSVP   73 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC---TTSEEEECCGGG-CCH--HHHTT-CSEEEECCCCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC---CCceEEeccccc-ccH--hhccc-CCEEEECCccC
Confidence            579999999999999999999999999999999887765542   689999999999 666  77888 99999999975


Q ss_pred             CCCCCcchhHH---HHHHHHHHHcCCCEEEEEccceeccCccCc---cCChhhhhhhhhHHHHHHHHHHHHHH---HHhC
Q 022495          147 PGWDLFAPWKA---INLVEACRKRGVNRFILISSILVNGAAMGQ---ILNPAYIFLNVFGLTLIAKLQAEQYI---RKSG  217 (296)
Q Consensus       147 ~~~~~~~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~---~~~~~~~~~~~~~~y~~sK~~~e~~~---~~~~  217 (296)
                      ..... ...+.   ++++++|++.+ ++||++||++++....+.   ..++. ....+...|+.+|.+.|.+.   ++.+
T Consensus        74 ~~~~~-~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~-~~~~~~~~y~~sK~~~e~~~~~~~~~~  150 (224)
T 3h2s_A           74 WGSGR-GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFP-ESAASQPWYDGALYQYYEYQFLQMNAN  150 (224)
T ss_dssp             TTSSC-THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCC-GGGGGSTTHHHHHHHHHHHHHHTTCTT
T ss_pred             CCcch-hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCC-CCCccchhhHHHHHHHHHHHHHHhcCC
Confidence            22111 12222   99999999999 899999998765433221   11221 22344678999999999652   3579


Q ss_pred             CcEEEEecCcccCCCCCCceeecc----cCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeC
Q 022495          218 INYTIIRPGGLRNEPPTGNIIMET----EDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR  278 (296)
Q Consensus       218 ~~~~~lrp~~i~g~~~~~~~~~~~----~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~  278 (296)
                      +++++|||++++|+.....+....    .......+++++|+|++++.++.++...+++|++.+.
T Consensus       151 i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~  215 (224)
T 3h2s_A          151 VNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDA  215 (224)
T ss_dssp             SCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEEC
T ss_pred             CcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecC
Confidence            999999999999874333222111    1112246899999999999999999888999999994

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.97  E-value=2.6e-31  Score=235.90  Aligned_cols=229  Identities=16%  Similarity=0.091  Sum_probs=168.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC-CCCEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv  140 (296)
                      +++|+||||||+||||++++++|+++|++|++++|++.+......  ....++.++.+|++| .+.+.+++++ ++|+||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vi   85 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD-QNKLLESIREFQPEIVF   85 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC-HHHHHHHHHHHCCSEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccC-HHHHHHHHHhcCCCEEE
Confidence            457899999999999999999999999999999998765432211  023578999999999 8989888875 489999


Q ss_pred             EcCCCCCCC----CCcchhHH-----HHHHHHHHHcC-CCEEEEEccceeccCccCc-cCChhhhhhhhhHHHHHHHHHH
Q 022495          141 CATGFQPGW----DLFAPWKA-----INLVEACRKRG-VNRFILISSILVNGAAMGQ-ILNPAYIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       141 ~~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~-~~~~~~~~~~~~~~y~~sK~~~  209 (296)
                      ||||.....    +.......     .++++++++.+ +++|||+||.++|+..... ...+ ..+..+.+.|+.+|.++
T Consensus        86 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E-~~~~~~~~~Y~~sK~~~  164 (357)
T 1rkx_A           86 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRE-NEAMGGYDPYSNSKGCA  164 (357)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCT-TSCBCCSSHHHHHHHHH
T ss_pred             ECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCC-CCCCCCCCccHHHHHHH
Confidence            999953210    11111111     88999998886 8899999999999865431 2222 22345677899999999


Q ss_pred             HHHHHHh-------------CCcEEEEecCcccCCCCCC--ce-------------eecccCccccCCcCHHHHHHHHHH
Q 022495          210 EQYIRKS-------------GINYTIIRPGGLRNEPPTG--NI-------------IMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       210 e~~~~~~-------------~~~~~~lrp~~i~g~~~~~--~~-------------~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      |.+++..             ++++++|||+.+||+....  .+             ...........+++++|+|++++.
T Consensus       165 e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~  244 (357)
T 1rkx_A          165 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLL  244 (357)
T ss_dssp             HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHH
Confidence            9987542             9999999999999976421  11             011112234568999999999999


Q ss_pred             HhcC----CCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          262 ALLH----PESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       262 ~l~~----~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++..    +...+++||+++. .+..+++.|+++.+.+
T Consensus       245 ~~~~~~~~~~~~~~~~ni~~~-~~~~~s~~e~~~~i~~  281 (357)
T 1rkx_A          245 LAQKLYTDGAEYAEGWNFGPN-DADATPVKNIVEQMVK  281 (357)
T ss_dssp             HHHHHHHTCGGGCSEEECCCC-GGGCEEHHHHHHHHHH
T ss_pred             HHHhhhhcCCCCCceEEECCC-CCCcccHHHHHHHHHH
Confidence            8874    2345679999851 1257999999998865

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.97  E-value=1.1e-30  Score=229.85  Aligned_cols=224  Identities=16%  Similarity=0.123  Sum_probs=167.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcc--hhhhccc-CCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLD--KAKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ++|+||||||+||||++++++|+++|  ++|++++|...  ....+.. ....+++++.+|++| .+.+.+++.+ +|+|
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~v   79 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVAD-YELVKELVRK-VDGV   79 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC-HHHHHHHHHT-CSEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCC-HHHHHHHhhC-CCEE
Confidence            35789999999999999999999997  89999998742  1111111 013579999999999 8999999988 9999


Q ss_pred             EEcCCCCCCC----CCcchh--HH---HHHHHHHHHcCC-CEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHH
Q 022495          140 VCATGFQPGW----DLFAPW--KA---INLVEACRKRGV-NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       140 v~~ag~~~~~----~~~~~~--~~---~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~  209 (296)
                      |||||.....    +.....  +.   .++++++.+.+. ++|||+||.++||.....+.++.. +..+.+.|+.+|.++
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~-~~~~~~~Y~~sK~~~  158 (336)
T 2hun_A           80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTEND-RLMPSSPYSATKAAS  158 (336)
T ss_dssp             EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTB-CCCCCSHHHHHHHHH
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCC-CCCCCCccHHHHHHH
Confidence            9999965311    111111  11   899999998874 799999999999876444444432 345677899999999


Q ss_pred             HHHHHH----hCCcEEEEecCcccCCCCCCc-e--------------eecccCccccCCcCHHHHHHHHHHHhcCCCCCC
Q 022495          210 EQYIRK----SGINYTIIRPGGLRNEPPTGN-I--------------IMETEDTLYEGTISRDQVAEVAVEALLHPESSY  270 (296)
Q Consensus       210 e~~~~~----~~~~~~~lrp~~i~g~~~~~~-~--------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~  270 (296)
                      |.+++.    .+++++++||+.+||+..... +              ...........+++++|+|++++.++..+. .+
T Consensus       159 e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g  237 (336)
T 2hun_A          159 DMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SR  237 (336)
T ss_dssp             HHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TT
T ss_pred             HHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CC
Confidence            998763    689999999999999864321 1              001111223468999999999999987654 57


Q ss_pred             CeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          271 KVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       271 ~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++|++.+   +..+++.|+++.+.+
T Consensus       238 ~~~~v~~---~~~~s~~e~~~~i~~  259 (336)
T 2hun_A          238 EIYNISA---GEEKTNLEVVKIILR  259 (336)
T ss_dssp             CEEEECC---SCEECHHHHHHHHHH
T ss_pred             CEEEeCC---CCcccHHHHHHHHHH
Confidence            7999988   688999999998864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.97  E-value=1.6e-30  Score=228.86  Aligned_cols=221  Identities=21%  Similarity=0.272  Sum_probs=167.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      .+++|+||||||+||||++++++|+++|++|++++|+.....+.+. ...++.++.+|++| .+.+.+++++ ++|+|||
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~-~~~~~~~~~~Dl~d-~~~~~~~~~~~~~D~vih   95 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK-DHPNLTFVEGSIAD-HALVNQLIGDLQPDAVVH   95 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-CCTTEEEEECCTTC-HHHHHHHHHHHCCSEEEE
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh-hcCCceEEEEeCCC-HHHHHHHHhccCCcEEEE
Confidence            4568999999999999999999999999999999998654332222 11578999999999 8888888864 5999999


Q ss_pred             cCCCCCCCCCcch-hH-----HHHHHHHHHHcCCCEEEEEccceecc----CccCccCChhhhhhhhh-HHHHHHHHHHH
Q 022495          142 ATGFQPGWDLFAP-WK-----AINLVEACRKRGVNRFILISSILVNG----AAMGQILNPAYIFLNVF-GLTLIAKLQAE  210 (296)
Q Consensus       142 ~ag~~~~~~~~~~-~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~----~~~~~~~~~~~~~~~~~-~~y~~sK~~~e  210 (296)
                      |||.......... ..     ..++++++++.++++|||+||.++|+    .... +.++..   .+. +.|+.+|.++|
T Consensus        96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~---~p~~~~Y~~sK~~~E  171 (333)
T 2q1w_A           96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR---NPANSSYAISKSANE  171 (333)
T ss_dssp             CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC---CCTTCHHHHHHHHHH
T ss_pred             CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC---CCCCCchHHHHHHHH
Confidence            9997543211111 11     18999999999999999999999998    4433 333332   445 78999999999


Q ss_pred             HHHHH-hCCcEEEEecCcccCCCCCCcee-------eccc----CccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeC
Q 022495          211 QYIRK-SGINYTIIRPGGLRNEPPTGNII-------METE----DTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR  278 (296)
Q Consensus       211 ~~~~~-~~~~~~~lrp~~i~g~~~~~~~~-------~~~~----~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~  278 (296)
                      .+++. .. ++++|||+.+||+.....+.       ....    ......+++++|+|++++.++..+.  +++|++.+ 
T Consensus       172 ~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~-  247 (333)
T 2q1w_A          172 DYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG--HGAYHFSS-  247 (333)
T ss_dssp             HHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC--CEEEECSC-
T ss_pred             HHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCC-
Confidence            99988 66 99999999999986321110       0000    1223468999999999999998765  67898887 


Q ss_pred             CCCCCCCHHHHHHHhhc
Q 022495          279 VDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       279 ~~~~~~~~~el~~~i~~  295 (296)
                        +..+++.|+++.+.+
T Consensus       248 --~~~~s~~e~~~~i~~  262 (333)
T 2q1w_A          248 --GTDVAIKELYDAVVE  262 (333)
T ss_dssp             --SCCEEHHHHHHHHHH
T ss_pred             --CCCccHHHHHHHHHH
Confidence              688999999998865

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1.6e-30  Score=228.68  Aligned_cols=223  Identities=14%  Similarity=0.045  Sum_probs=169.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh----hcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK----TTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~v  139 (296)
                      .+|+||||||+||||++++++|+++|++|++++|+.....    +.+. ...++.++.+|++| .+.+.+++++ ++|+|
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMAD-ACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTC-HHHHHHHHHHHCCSEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCC-HHHHHHHHHHcCCCEE
Confidence            3789999999999999999999999999999999875421    1110 23578999999999 8999998875 47999


Q ss_pred             EEcCCCCCCC----CCcchhHH-----HHHHHHHHHcCC-CEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHH
Q 022495          140 VCATGFQPGW----DLFAPWKA-----INLVEACRKRGV-NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       140 v~~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~  209 (296)
                      |||||.....    +.......     .++++++++.++ ++|||+||.++|+...+.+.++.. +..+.+.|+.+|.++
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~-~~~p~~~Y~~sK~~~  169 (335)
T 1rpn_A           91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENT-PFYPRSPYGVAKLYG  169 (335)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTS-CCCCCSHHHHHHHHH
T ss_pred             EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCccc-CCCCCChhHHHHHHH
Confidence            9999964321    11111111     899999999886 899999999999876554444433 445677899999999


Q ss_pred             HHHHHH----hCCcEEEEecCcccCCCCCCce-------------------eecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          210 EQYIRK----SGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       210 e~~~~~----~~~~~~~lrp~~i~g~~~~~~~-------------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      |.+++.    .+++++++||+.+||+......                   ...+.......+++++|+|++++.++..+
T Consensus       170 e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~  249 (335)
T 1rpn_A          170 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD  249 (335)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC
Confidence            998764    5999999999999997533211                   01111123346899999999999999876


Q ss_pred             CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          267 ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       267 ~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .  +.+||+++   +..+++.|+++.+.+
T Consensus       250 ~--~~~~ni~~---~~~~s~~e~~~~i~~  273 (335)
T 1rpn_A          250 K--ADDYVVAT---GVTTTVRDMCQIAFE  273 (335)
T ss_dssp             S--CCCEEECC---SCEEEHHHHHHHHHH
T ss_pred             C--CCEEEEeC---CCCccHHHHHHHHHH
Confidence            5  36899988   688999999999875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.97  E-value=2.2e-30  Score=228.09  Aligned_cols=222  Identities=16%  Similarity=0.117  Sum_probs=168.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC---C---CeEEEEEcCcch--hhhccc-CCCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK---G---FAVKAGVRDLDK--AKTTLS-KDNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~---g---~~V~~~~r~~~~--~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      |+||||||+||||++++++|+++   |   ++|++++|....  ...+.. ....+++++.+|++| .+.+.+++.+ +|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~d   78 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD-AGLLARELRG-VD   78 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTC-HHHHHHHTTT-CC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCC-HHHHHHHhcC-CC
Confidence            57999999999999999999997   8   999999996521  111110 023579999999999 8999999988 99


Q ss_pred             EEEEcCCCCCCC----CCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHH
Q 022495          138 AVVCATGFQPGW----DLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQ  208 (296)
Q Consensus       138 ~vv~~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~  208 (296)
                      +||||||.....    +.......     .++++++++.++++|||+||.++|+.....+.++.. +..+.+.|+.+|.+
T Consensus        79 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~-~~~~~~~Y~~sK~~  157 (337)
T 1r6d_A           79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESS-PLEPNSPYAASKAG  157 (337)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTS-CCCCCSHHHHHHHH
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCC-CCCCCCchHHHHHH
Confidence            999999965311    11111111     899999999999999999999999875444444432 44567789999999


Q ss_pred             HHHHHH----HhCCcEEEEecCcccCCCCCC-ce--------------eecccCccccCCcCHHHHHHHHHHHhcCCCCC
Q 022495          209 AEQYIR----KSGINYTIIRPGGLRNEPPTG-NI--------------IMETEDTLYEGTISRDQVAEVAVEALLHPESS  269 (296)
Q Consensus       209 ~e~~~~----~~~~~~~~lrp~~i~g~~~~~-~~--------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~  269 (296)
                      +|.+++    +.+++++++||+.+||+.... .+              ...........+++++|+|++++.++..+. .
T Consensus       158 ~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~  236 (337)
T 1r6d_A          158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (337)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-C
Confidence            998875    369999999999999986432 10              111112223468999999999999997654 5


Q ss_pred             CCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          270 YKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       270 ~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +++|++.+   +..+++.|+++.+.+
T Consensus       237 g~~~~v~~---~~~~s~~e~~~~i~~  259 (337)
T 1r6d_A          237 GEIYHIGG---GLELTNRELTGILLD  259 (337)
T ss_dssp             TCEEEECC---CCEEEHHHHHHHHHH
T ss_pred             CCEEEeCC---CCCccHHHHHHHHHH
Confidence            67999988   688999999998864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=4.7e-31  Score=233.32  Aligned_cols=224  Identities=17%  Similarity=0.171  Sum_probs=166.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch----------hhhcccCCCCCeEEEEcccCCChHHHHHHhc--
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK----------AKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--  133 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--  133 (296)
                      +|+||||||+||||++++++|+++|++|++++|....          ...+......++.++.+|++| .+.+.++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILD-QGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCC-HHHHHHHHHhc
Confidence            5799999999999999999999999999999986432          111110013578999999999 899999888  


Q ss_pred             CCCCEEEEcCCCCCCC----CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh-hHHHH
Q 022495          134 DDSEAVVCATGFQPGW----DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV-FGLTL  203 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~----~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~-~~~y~  203 (296)
                      + +|+||||||.....    +.....  +.   .+++++|++.++++|||+||.++|+.....+.++.. +..+ .+.|+
T Consensus        81 ~-~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~-~~~p~~~~Y~  158 (348)
T 1ek6_A           81 S-FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH-PTGGCTNPYG  158 (348)
T ss_dssp             C-EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTS-CCCCCSSHHH
T ss_pred             C-CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCC-CCCCCCCchH
Confidence            6 99999999965311    111111  11   899999999999999999999999875554555543 2334 67899


Q ss_pred             HHHHHHHHHHHH---hC--CcEEEEecCcccCCCCC-----------Ccee---------------ecc------cCccc
Q 022495          204 IAKLQAEQYIRK---SG--INYTIIRPGGLRNEPPT-----------GNII---------------MET------EDTLY  246 (296)
Q Consensus       204 ~sK~~~e~~~~~---~~--~~~~~lrp~~i~g~~~~-----------~~~~---------------~~~------~~~~~  246 (296)
                      .+|.++|.+++.   .+  ++++++||+.+||+...           ..+.               ...      .....
T Consensus       159 ~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  238 (348)
T 1ek6_A          159 KSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV  238 (348)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred             HHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceE
Confidence            999999998864   24  99999999999987421           1110               000      11223


Q ss_pred             cCCcCHHHHHHHHHHHhcCCC-CCC-CeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          247 EGTISRDQVAEVAVEALLHPE-SSY-KVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       247 ~~~i~~~Dva~~i~~~l~~~~-~~~-~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ..+++++|+|++++.++..+. ..+ ++||+++   +..+++.|+++.+.+
T Consensus       239 ~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~---~~~~s~~e~~~~i~~  286 (348)
T 1ek6_A          239 RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT---GTGYSVLQMVQAMEK  286 (348)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC---SCCEEHHHHHHHHHH
T ss_pred             EeeEEHHHHHHHHHHHHhcccccCCceEEEeCC---CCCccHHHHHHHHHH
Confidence            468999999999999997652 233 7999987   688999999999875

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=1.7e-31  Score=232.62  Aligned_cols=219  Identities=14%  Similarity=0.169  Sum_probs=166.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--CCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d~vv~  141 (296)
                      +|+||||||+||||++++++|+++  |++|++++|++.... ..    .+++++.+|++| .+.+.++++  + +|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~----~~~~~~~~D~~d-~~~~~~~~~~~~-~d~vih   74 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV----NSGPFEVVNALD-FNQIEHLVEVHK-ITDIYL   74 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH----HSSCEEECCTTC-HHHHHHHHHHTT-CCEEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc----CCCceEEecCCC-HHHHHHHHhhcC-CCEEEE
Confidence            578999999999999999999999  899999999875522 11    357899999999 899999998  7 999999


Q ss_pred             cCCCCCCC---CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHH
Q 022495          142 ATGFQPGW---DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYI  213 (296)
Q Consensus       142 ~ag~~~~~---~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~  213 (296)
                      |||.....   +.....  +.   .++++++++.++++|||+||.++|+.........+..+..+.+.|+.+|.++|.++
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence            99864321   111111  11   89999999999999999999999987543222223334566788999999999887


Q ss_pred             HH----hCCcEEEEecCcccCCCCC--C-----------------ceeecccCccccCCcCHHHHHHHHHHHhcCCCC--
Q 022495          214 RK----SGINYTIIRPGGLRNEPPT--G-----------------NIIMETEDTLYEGTISRDQVAEVAVEALLHPES--  268 (296)
Q Consensus       214 ~~----~~~~~~~lrp~~i~g~~~~--~-----------------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~--  268 (296)
                      +.    .+++++++||+.+||+...  .                 .............+++++|+|++++.+++.+..  
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~  234 (312)
T 2yy7_A          155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKI  234 (312)
T ss_dssp             HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGC
T ss_pred             HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccccc
Confidence            53    5999999999999996421  1                 011111222335689999999999999987653  


Q ss_pred             -CCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          269 -SYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       269 -~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                       .+++||+++    ..+++.|+++.+.+
T Consensus       235 ~~~~~~ni~~----~~~s~~e~~~~i~~  258 (312)
T 2yy7_A          235 KIHSSYNLAA----MSFTPTEIANEIKK  258 (312)
T ss_dssp             CCSSCEECCS----EEECHHHHHHHHHT
T ss_pred             ccCceEEeCC----CccCHHHHHHHHHH
Confidence             247899975    57999999999875

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.97  E-value=7e-31  Score=229.66  Aligned_cols=209  Identities=15%  Similarity=0.172  Sum_probs=162.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--CCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d~vv~~  142 (296)
                      ++|+||||||+||||++++++|+++|++|++++|+.                 .+|++| .+.+.++++  + +|+|||+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------~~D~~d-~~~~~~~~~~~~-~d~vih~   62 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------ELNLLD-SRAVHDFFASER-IDQVYLA   62 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------TCCTTC-HHHHHHHHHHHC-CSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------cCCccC-HHHHHHHHHhcC-CCEEEEc
Confidence            467999999999999999999999999999887752                 279999 899999998  7 9999999


Q ss_pred             CCCCCCC-----CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh---hhhh-hHHHHHHHHH
Q 022495          143 TGFQPGW-----DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI---FLNV-FGLTLIAKLQ  208 (296)
Q Consensus       143 ag~~~~~-----~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~---~~~~-~~~y~~sK~~  208 (296)
                      |+.....     +.....  +.   .++++++++.++++|||+||..+|+.....+.++...   +..+ .+.|+.+|.+
T Consensus        63 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~  142 (321)
T 1e6u_A           63 AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  142 (321)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             CeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHH
Confidence            9965321     111111  11   8999999999999999999999998765555555431   2334 3689999999


Q ss_pred             HHHHHHH----hCCcEEEEecCcccCCCCCC-----c-------------------eeecccCccccCCcCHHHHHHHHH
Q 022495          209 AEQYIRK----SGINYTIIRPGGLRNEPPTG-----N-------------------IIMETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       209 ~e~~~~~----~~~~~~~lrp~~i~g~~~~~-----~-------------------~~~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                      +|++++.    .++++++|||+.+||+....     .                   +...........+++++|+|++++
T Consensus       143 ~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~  222 (321)
T 1e6u_A          143 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI  222 (321)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHH
Confidence            9998865    59999999999999986431     1                   001112223346899999999999


Q ss_pred             HHhcCCCCC--------CCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          261 EALLHPESS--------YKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       261 ~~l~~~~~~--------~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .++..+...        +++||+++   +..+++.|+++.+.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~  262 (321)
T 1e6u_A          223 HVMELAHEVWLENTQPMLSHINVGT---GVDCTIRELAQTIAK  262 (321)
T ss_dssp             HHHHSCHHHHHHTSBTTBCCEEESC---SCCEEHHHHHHHHHH
T ss_pred             HHHhCcccccccccccCCceEEeCC---CCCccHHHHHHHHHH
Confidence            999876542        57999988   688999999998875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.97  E-value=2.3e-30  Score=228.81  Aligned_cols=222  Identities=15%  Similarity=0.082  Sum_probs=167.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCcch--hhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDK--AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +|+||||||+||||++++++|+++  |++|++++|+...  ..........++.++.+|++| .+.+.+++++ +|+|||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~vih   81 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD-AELVDKLAAK-ADAIVH   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTC-HHHHHHHHTT-CSEEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCC-HHHHHHHhhc-CCEEEE
Confidence            579999999999999999999999  8999999997531  111111123579999999999 8999999999 999999


Q ss_pred             cCCCCCCC----CCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccC------------ccCChhhhhhhhhH
Q 022495          142 ATGFQPGW----DLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMG------------QILNPAYIFLNVFG  200 (296)
Q Consensus       142 ~ag~~~~~----~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~------------~~~~~~~~~~~~~~  200 (296)
                      |||.....    +......     ..++++++.+.++ +|||+||.++||....            .+.++. .+..+.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~-~~~~~~~  159 (348)
T 1oc2_A           82 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE-TNYNPSS  159 (348)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT-SCCCCCS
T ss_pred             CCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCC-CCCCCCC
Confidence            99965311    1111111     1899999999887 9999999999986432            223332 2345667


Q ss_pred             HHHHHHHHHHHHHHH----hCCcEEEEecCcccCCCCCC-ce--------------eecccCccccCCcCHHHHHHHHHH
Q 022495          201 LTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTG-NI--------------IMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       201 ~y~~sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~~~-~~--------------~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      .|+.+|.++|.+++.    .++++++|||+.+||+.... .+              ...........+++++|+|++++.
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  239 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA  239 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHH
Confidence            899999999988754    59999999999999986532 11              001112233468999999999999


Q ss_pred             HhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          262 ALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       262 ~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++..+. .+++|++.+   +..+++.|+++.+.+
T Consensus       240 ~~~~~~-~g~~~~i~~---~~~~s~~e~~~~i~~  269 (348)
T 1oc2_A          240 ILTKGR-MGETYLIGA---DGEKNNKEVLELILE  269 (348)
T ss_dssp             HHHHCC-TTCEEEECC---SCEEEHHHHHHHHHH
T ss_pred             HhhCCC-CCCeEEeCC---CCCCCHHHHHHHHHH
Confidence            997653 577999988   688999999998864

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=2.4e-30  Score=220.85  Aligned_cols=198  Identities=20%  Similarity=0.204  Sum_probs=158.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ++|+||||||+||||+++++.|+++|++|++++|++.+..      ..++.++.+|++| .+.+.+++++ +|+||||||
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dl~d-~~~~~~~~~~-~D~vi~~Ag   73 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------GPNEECVQCDLAD-ANAVNAMVAG-CDGIVHLGG   73 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------CTTEEEEECCTTC-HHHHHHHHTT-CSEEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------CCCCEEEEcCCCC-HHHHHHHHcC-CCEEEECCC
Confidence            4689999999999999999999999999999999976532      3689999999999 9999999998 999999999


Q ss_pred             CCCCCCCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH----H
Q 022495          145 FQPGWDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR----K  215 (296)
Q Consensus       145 ~~~~~~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~  215 (296)
                      .....+.......     .++++++++.+.++||++||..+|+.........+..+..+.+.|+.+|+++|.+++    +
T Consensus        74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~  153 (267)
T 3rft_A           74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDK  153 (267)
T ss_dssp             CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence            7433222211121     899999999999999999999998754332222223355667889999999998775    5


Q ss_pred             hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeC
Q 022495          216 SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR  278 (296)
Q Consensus       216 ~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~  278 (296)
                      +++++++|||+.++++...        ......+++++|+++++..++..+.....++++.+.
T Consensus       154 ~g~~~~~vr~~~v~~~~~~--------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~  208 (267)
T 3rft_A          154 FGQETALVRIGSCTPEPNN--------YRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASA  208 (267)
T ss_dssp             HCCCEEEEEECBCSSSCCS--------TTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCC
T ss_pred             hCCeEEEEEeecccCCCCC--------CCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCC
Confidence            7999999999999987422        223346899999999999999887766677888774

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.97  E-value=2.6e-30  Score=222.51  Aligned_cols=204  Identities=21%  Similarity=0.290  Sum_probs=162.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      |+||||||+||||++++++|+++  |++|++++|++++...+..   .+++++.+|++| .+.+.+++++ +|+|||+|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~d-~~~l~~~~~~-~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---QGVEVRHGDYNQ-PESLQKAFAG-VSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---TTCEEEECCTTC-HHHHHHHTTT-CSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---cCCeEEEeccCC-HHHHHHHHhc-CCEEEEcCC
Confidence            57999999999999999999999  9999999998776544322   478999999999 8999999999 999999998


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEe
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIR  224 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lr  224 (296)
                      .... .........+++++|++.++++|||+||.++|..               ...|+.+|.++|+++++.+++++++|
T Consensus        76 ~~~~-~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---------------~~~y~~~K~~~E~~~~~~~~~~~ilr  139 (287)
T 2jl1_A           76 PHYD-NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES---------------IIPLAHVHLATEYAIRTTNIPYTFLR  139 (287)
T ss_dssp             CCSC-HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC---------------CSTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCcC-chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC---------------CCchHHHHHHHHHHHHHcCCCeEEEE
Confidence            5321 0001111289999999999999999999877521               12489999999999999999999999


Q ss_pred             cCcccCCCCC---------CceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          225 PGGLRNEPPT---------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       225 p~~i~g~~~~---------~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |+.++++...         +.... ........+++++|+|++++.++..+...+++|++.+   +..+++.|+++.+.+
T Consensus       140 p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~---~~~~s~~e~~~~i~~  215 (287)
T 2jl1_A          140 NALYTDFFVNEGLRASTESGAIVT-NAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVS---NQPWTFDELAQILSE  215 (287)
T ss_dssp             ECCBHHHHSSGGGHHHHHHTEEEE-SCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECC---SSCBCHHHHHHHHHH
T ss_pred             CCEeccccchhhHHHHhhCCceec-cCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecC---CCcCCHHHHHHHHHH
Confidence            9988875411         11111 1122335789999999999999988766678999988   688999999998875

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.97  E-value=7.4e-31  Score=228.64  Aligned_cols=217  Identities=18%  Similarity=0.277  Sum_probs=163.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--CCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d~vv~~ag  144 (296)
                      |+||||||+||||++++++|+++|++|++++|........+   ..++.++.+|++| .+.+.++++  + +|+|||+|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~Dl~~-~~~~~~~~~~~~-~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV---PKGVPFFRVDLRD-KEGVERAFREFR-PTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS---CTTCCEECCCTTC-HHHHHHHHHHHC-CSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc---ccCeEEEECCCCC-HHHHHHHHHhcC-CCEEEECcc
Confidence            47999999999999999999999999999998543222222   1468899999999 899999887  6 999999998


Q ss_pred             CCCCC----CCcchhHH-----HHHHHHHHHcCCCEEEEEccc-eeccC-ccCccCChhhhhhhhhHHHHHHHHHHHHHH
Q 022495          145 FQPGW----DLFAPWKA-----INLVEACRKRGVNRFILISSI-LVNGA-AMGQILNPAYIFLNVFGLTLIAKLQAEQYI  213 (296)
Q Consensus       145 ~~~~~----~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~-~~~~~-~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~  213 (296)
                      .....    +.......     .+++++|++.++++||++||. .+|+. ....+.++.. +..+.+.|+.+|.++|.++
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~-~~~~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETW-PPRPKSPYAASKAAFEHYL  154 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTS-CCCCCSHHHHHHHHHHHHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCC-CCCCCChHHHHHHHHHHHH
Confidence            64311    11111111     889999999999999999999 88876 3333333332 3445678999999999887


Q ss_pred             H----HhCCcEEEEecCcccCCCCCCc----e--------------eec-----ccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          214 R----KSGINYTIIRPGGLRNEPPTGN----I--------------IME-----TEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       214 ~----~~~~~~~~lrp~~i~g~~~~~~----~--------------~~~-----~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      +    +.++++++|||+.+||+.....    +              ...     ........+++++|+|++++.++..+
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence            5    4699999999999999864321    0              011     11223346899999999999998764


Q ss_pred             CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          267 ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       267 ~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                         +++||+.+   +..+++.|+++.+.+
T Consensus       235 ---~~~~~i~~---~~~~s~~e~~~~i~~  257 (311)
T 2p5y_A          235 ---EGIYNVGT---GEGHTTREVLMAVAE  257 (311)
T ss_dssp             ---CEEEEESC---SCCEEHHHHHHHHHH
T ss_pred             ---CCEEEeCC---CCCccHHHHHHHHHH
Confidence               67899987   688999999998865

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.97  E-value=9.3e-31  Score=227.92  Aligned_cols=215  Identities=14%  Similarity=0.093  Sum_probs=161.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      .+++|+||||||+||||++++++|+++|+      +...        ....++++.+|++| .+.+.+++++ ++|+|||
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~--------~~~~~~~~~~D~~d-~~~~~~~~~~~~~d~Vih   67 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE--------DWVFVSSKDADLTD-TAQTRALFEKVQPTHVIH   67 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC--------EEEECCTTTCCTTS-HHHHHHHHHHSCCSEEEE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc--------cccccCceecccCC-HHHHHHHHhhcCCCEEEE
Confidence            45789999999999999999999999998      1111        11234556799999 8999998875 5999999


Q ss_pred             cCCCCCC----C-CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh---hhhhhH-HHHHHHH
Q 022495          142 ATGFQPG----W-DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI---FLNVFG-LTLIAKL  207 (296)
Q Consensus       142 ~ag~~~~----~-~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~---~~~~~~-~y~~sK~  207 (296)
                      ||+....    . +.....  +.   .+++++|++.++++|||+||.++|+.....+.++...   +..+.. .|+.+|.
T Consensus        68 ~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~  147 (319)
T 4b8w_A           68 LAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKR  147 (319)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHH
T ss_pred             CceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHH
Confidence            9997531    1 111111  11   8999999999999999999999999876666666542   223333 6999999


Q ss_pred             HHHHHHHH----hCCcEEEEecCcccCCCCCCc-----------------------eeecccCccccCCcCHHHHHHHHH
Q 022495          208 QAEQYIRK----SGINYTIIRPGGLRNEPPTGN-----------------------IIMETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       208 ~~e~~~~~----~~~~~~~lrp~~i~g~~~~~~-----------------------~~~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                      ++|++++.    .+++++++||+.+||+.....                       +...........+++++|+|++++
T Consensus       148 ~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  227 (319)
T 4b8w_A          148 MIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFI  227 (319)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHH
Confidence            99988753    799999999999999864321                       011122233346899999999999


Q ss_pred             HHhcCCC-CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          261 EALLHPE-SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       261 ~~l~~~~-~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .++..+. ..+++||+++   +..+++.|+++.+.+
T Consensus       228 ~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~  260 (319)
T 4b8w_A          228 WVLREYNEVEPIILSVGE---EDEVSIKEAAEAVVE  260 (319)
T ss_dssp             HHHHHCCCSSCEEECCCG---GGCEEHHHHHHHHHH
T ss_pred             HHHhccccCCceEEEecC---CCceeHHHHHHHHHH
Confidence            9998743 3456888887   689999999999875

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.97  E-value=2.3e-30  Score=228.65  Aligned_cols=224  Identities=17%  Similarity=0.172  Sum_probs=163.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhh---hcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv  140 (296)
                      ||+||||||+||||+++++.|+++|++|++++|.. ....   ..+. ...++.++.+|++| .+.+.+++++ ++|+||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vi   78 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRN-KNDVTRLITKYMPDSCF   78 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTC-HHHHHHHHHHHCCSEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc-cCCceEEEEcCCCC-HHHHHHHHhccCCCEEE
Confidence            36899999999999999999999999999999853 1111   1111 12468999999999 8888888864 599999


Q ss_pred             EcCCCCCCC----CCcch--hHH---HHHHHHHHHcCCC-EEEEEccceeccCccCcc----------------CChhhh
Q 022495          141 CATGFQPGW----DLFAP--WKA---INLVEACRKRGVN-RFILISSILVNGAAMGQI----------------LNPAYI  194 (296)
Q Consensus       141 ~~ag~~~~~----~~~~~--~~~---~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~~----------------~~~~~~  194 (296)
                      ||||.....    +....  .+.   .++++++++.+++ +|||+||.++|+.....+                .++ ..
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e-~~  157 (347)
T 1orr_A           79 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE-ST  157 (347)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT-TS
T ss_pred             ECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccc-cC
Confidence            999964311    11111  111   8999999998875 999999999998643322                111 12


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH----hCCcEEEEecCcccCCCCCCc----e-------------------eecccCcccc
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTGN----I-------------------IMETEDTLYE  247 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~~~~----~-------------------~~~~~~~~~~  247 (296)
                      +..+.+.|+.+|+++|.+++.    .++++++|||+.+||+.....    .                   ...+......
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  237 (347)
T 1orr_A          158 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  237 (347)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceE
Confidence            344678899999999998864    499999999999999864221    0                   0011112223


Q ss_pred             CCcCHHHHHHHHHHHhcC-CCCCCCeEEEEeCCCCC--CCCHHHHHHHhhc
Q 022495          248 GTISRDQVAEVAVEALLH-PESSYKVVEIISRVDAP--KRSYEDLFGSIKQ  295 (296)
Q Consensus       248 ~~i~~~Dva~~i~~~l~~-~~~~~~~~~i~~~~~~~--~~~~~el~~~i~~  295 (296)
                      .+++++|+|++++.++.. +...+++|++.+   +.  .+++.|+++.+.+
T Consensus       238 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~---~~~~~~s~~e~~~~i~~  285 (347)
T 1orr_A          238 DVLHAEDMISLYFTALANVSKIRGNAFNIGG---TIVNSLSLLELFKLLED  285 (347)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHHHTTCEEEESS---CGGGEEEHHHHHHHHHH
T ss_pred             eeEEHHHHHHHHHHHHhccccCCCCEEEeCC---CCCCCccHHHHHHHHHH
Confidence            589999999999999976 234577999987   44  5899999998865

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.97  E-value=5e-30  Score=227.63  Aligned_cols=219  Identities=16%  Similarity=0.172  Sum_probs=165.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhh-hcccCCCCCeEEEEcccCCChHHHHHHhcC----CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAK-TTLSKDNPSLQIVKADVTEGSAKLSEAIGD----DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----~~d  137 (296)
                      +++|+||||||+||||++++++|+++| ++|++++|+..... ..+    .++. +.+|++| .+.+.+++++    ++|
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~----~~~~-~~~d~~~-~~~~~~~~~~~~~~~~d  117 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL----VDLN-IADYMDK-EDFLIQIMAGEEFGDVE  117 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT----TTSC-CSEEEEH-HHHHHHHHTTCCCSSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc----cCce-EeeecCc-HHHHHHHHhhcccCCCC
Confidence            457899999999999999999999999 99999999865431 111    2333 7799999 8888888863    399


Q ss_pred             EEEEcCCCCCCCCC--cchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHH
Q 022495          138 AVVCATGFQPGWDL--FAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAE  210 (296)
Q Consensus       138 ~vv~~ag~~~~~~~--~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e  210 (296)
                      +||||||.......  ......     .++++++++.++ +|||+||..+|+...+.+.++.. +..+.+.|+.+|.++|
T Consensus       118 ~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~-~~~p~~~Y~~sK~~~E  195 (357)
T 2x6t_A          118 AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESRE-YEKPLNVFGYSKFLFD  195 (357)
T ss_dssp             EEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGG-GCCCSSHHHHHHHHHH
T ss_pred             EEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcC-CCCCCChhHHHHHHHH
Confidence            99999997543211  111111     899999999998 99999999999876554544443 4566788999999999


Q ss_pred             HHHHH----hCCcEEEEecCcccCCCCCC-----ce--------------eecccCcc-ccCCcCHHHHHHHHHHHhcCC
Q 022495          211 QYIRK----SGINYTIIRPGGLRNEPPTG-----NI--------------IMETEDTL-YEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       211 ~~~~~----~~~~~~~lrp~~i~g~~~~~-----~~--------------~~~~~~~~-~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      .+++.    .++++++|||+.+||+....     ..              ........ ...+++++|+|++++.++..+
T Consensus       196 ~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~  275 (357)
T 2x6t_A          196 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG  275 (357)
T ss_dssp             HHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcC
Confidence            98864    47999999999999986431     10              01111223 456899999999999999876


Q ss_pred             CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          267 ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       267 ~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .  +++|++.+   +..+++.|+++.+.+
T Consensus       276 ~--~~~~~i~~---~~~~s~~e~~~~i~~  299 (357)
T 2x6t_A          276 V--SGIFNLGT---GRAESFQAVADATLA  299 (357)
T ss_dssp             C--CEEEEESC---SCCEEHHHHHHHHHH
T ss_pred             C--CCeEEecC---CCcccHHHHHHHHHH
Confidence            5  67999987   688999999998865

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.97  E-value=8.6e-31  Score=225.63  Aligned_cols=203  Identities=12%  Similarity=0.153  Sum_probs=162.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |+||||||+||||+++++.|+++|++|++++|.                  ++|++| .+.+.+++++ ++|+||||||.
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~D~~d-~~~~~~~~~~~~~d~vi~~a~~   66 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------LLDITN-ISQVQQVVQEIRPHIIIHCAAY   66 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------TSCTTC-HHHHHHHHHHHCCSEEEECCCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------ccCCCC-HHHHHHHHHhcCCCEEEECCcc
Confidence            489999999999999999999999999999992                  279999 8999999883 39999999997


Q ss_pred             CCCC----CCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          146 QPGW----DLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       146 ~~~~----~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      ....    +.......     .++++++++.++ +|||+||.++|+...+.+.+++. +..|.+.|+.+|.++|++++..
T Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~  144 (287)
T 3sc6_A           67 TKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFH-NPAPINIYGASKYAGEQFVKEL  144 (287)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTS-CCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHh
Confidence            5421    11111111     899999999987 89999999999877665555543 4567788999999999999998


Q ss_pred             CCcEEEEecCcccCCCCCCce-----------eecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCC
Q 022495          217 GINYTIIRPGGLRNEPPTGNI-----------IMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~~~-----------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~  285 (296)
                      ..+++++||+.+||+...+.+           ...........+++++|+|++++.++.++.  +.+||+.+   +..++
T Consensus       145 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~---~~~~s  219 (287)
T 3sc6_A          145 HNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL--YGTYHVSN---TGSCS  219 (287)
T ss_dssp             CSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC--CEEEECCC---BSCEE
T ss_pred             CCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC--CCeEEEcC---CCccc
Confidence            889999999999997543211           001111234578999999999999999876  56899988   68899


Q ss_pred             HHHHHHHhhc
Q 022495          286 YEDLFGSIKQ  295 (296)
Q Consensus       286 ~~el~~~i~~  295 (296)
                      +.|+++.+.+
T Consensus       220 ~~e~~~~i~~  229 (287)
T 3sc6_A          220 WFEFAKKIFS  229 (287)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.97  E-value=2.1e-29  Score=211.15  Aligned_cols=201  Identities=21%  Similarity=0.263  Sum_probs=149.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +++|+||||||+|+||+++++.|+++| ++|++++|++++..+..   ..++.++.+|++| .+.+.+++++ +|+||||
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~---~~~~~~~~~Dl~d-~~~~~~~~~~-~D~vv~~   95 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY---PTNSQIIMGDVLN-HAALKQAMQG-QDIVYAN   95 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC---CTTEEEEECCTTC-HHHHHHHHTT-CSEEEEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc---cCCcEEEEecCCC-HHHHHHHhcC-CCEEEEc
Confidence            457899999999999999999999999 89999999988765443   3589999999999 9999999999 9999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCCh-hhhhhhhhHHHHHHHHHHHHHHHHhCCcEE
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNP-AYIFLNVFGLTLIAKLQAEQYIRKSGINYT  221 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~-~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~  221 (296)
                      +|...     .....++++++|++.++++||++||..+|+...+..... ......+...|    ..+|+++++.+++++
T Consensus        96 a~~~~-----~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gi~~~  166 (236)
T 3qvo_A           96 LTGED-----LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPF----RRAADAIEASGLEYT  166 (236)
T ss_dssp             CCSTT-----HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHH----HHHHHHHHTSCSEEE
T ss_pred             CCCCc-----hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHH----HHHHHHHHHCCCCEE
Confidence            98521     223348999999999999999999999987654321111 11112233444    445666778999999


Q ss_pred             EEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC-CCCCeEEEEeC
Q 022495          222 IIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE-SSYKVVEIISR  278 (296)
Q Consensus       222 ~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~-~~~~~~~i~~~  278 (296)
                      +||||+++++.................+++++|+|++++.++.++. ..++++++.++
T Consensus       167 ~vrPg~i~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          167 ILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQP  224 (236)
T ss_dssp             EEEECEEECCSCCCCEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECS
T ss_pred             EEeCCcccCCCCcceEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCC
Confidence            9999999997654433332222333457999999999999999876 56789999884

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=5.1e-30  Score=230.64  Aligned_cols=225  Identities=17%  Similarity=0.143  Sum_probs=165.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHH-HCCCeEEEEEcCcchh---------hhc------ccCC--CCC---eEEEEcccCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLL-AKGFAVKAGVRDLDKA---------KTT------LSKD--NPS---LQIVKADVTEG  124 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~-~~g~~V~~~~r~~~~~---------~~~------~~~~--~~~---~~~~~~D~~d~  124 (296)
                      +|+||||||+||||++++++|+ ++|++|++++|.....         ..+      +...  ..+   +.++.+|++| 
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN-   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC-
Confidence            4699999999999999999999 9999999999976442         111      0000  124   8999999999 


Q ss_pred             hHHHHHHhcC--CCCEEEEcCCCCCCC----CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCcc-------C
Q 022495          125 SAKLSEAIGD--DSEAVVCATGFQPGW----DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAM-------G  186 (296)
Q Consensus       125 ~~~~~~~~~~--~~d~vv~~ag~~~~~----~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~-------~  186 (296)
                      .+.+.++++.  ++|+||||||.....    +.....  +.   .+++++|++.++++|||+||.++|+...       .
T Consensus        81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  160 (397)
T 1gy8_A           81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA  160 (397)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence            8888888862  399999999965321    111111  11   8999999999999999999999998654       2


Q ss_pred             ccCChhhhhhhhhHHHHHHHHHHHHHHHH----hCCcEEEEecCcccCCCCC----------Ccee---e--------cc
Q 022495          187 QILNPAYIFLNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPT----------GNII---M--------ET  241 (296)
Q Consensus       187 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~~----------~~~~---~--------~~  241 (296)
                      .+.++.. +..+.+.|+.+|+++|.+++.    .++++++|||+++||+...          ..+.   .        ..
T Consensus       161 ~~~~E~~-~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  239 (397)
T 1gy8_A          161 EPIDINA-KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD  239 (397)
T ss_dssp             CCBCTTS-CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred             cCcCccC-CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhc
Confidence            3344432 345678899999999998764    5999999999999998531          1110   0        00


Q ss_pred             -------------------------cCccccCCcCHHHHHHHHHHHhcCCCCC-----C---CeEEEEeCCCCCCCCHHH
Q 022495          242 -------------------------EDTLYEGTISRDQVAEVAVEALLHPESS-----Y---KVVEIISRVDAPKRSYED  288 (296)
Q Consensus       242 -------------------------~~~~~~~~i~~~Dva~~i~~~l~~~~~~-----~---~~~~i~~~~~~~~~~~~e  288 (296)
                                               .......+++++|+|++++.++..+...     +   ++||+++   +..+++.|
T Consensus       240 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~---~~~~s~~e  316 (397)
T 1gy8_A          240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT---SRGYSVRE  316 (397)
T ss_dssp             -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC---SCCEEHHH
T ss_pred             CccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCC---CCcccHHH
Confidence                                     1112235899999999999998764322     2   6899987   68899999


Q ss_pred             HHHHhhc
Q 022495          289 LFGSIKQ  295 (296)
Q Consensus       289 l~~~i~~  295 (296)
                      +++.+.+
T Consensus       317 ~~~~i~~  323 (397)
T 1gy8_A          317 VIEVARK  323 (397)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.97  E-value=2.7e-30  Score=232.91  Aligned_cols=226  Identities=13%  Similarity=0.120  Sum_probs=164.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh--------------------hcccCCCCCeEEEEcccCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--------------------TTLSKDNPSLQIVKADVTE  123 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------------~~~~~~~~~~~~~~~D~~d  123 (296)
                      .++++||||||+||||++++++|+++|++|++++|......                    ........++.++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            35789999999999999999999999999999998643211                    0000013578999999999


Q ss_pred             ChHHHHHHhcC-CCCEEEEcCCCCCCC---CCcc------hhHH---HHHHHHHHHcCC-CEEEEEccceeccCccCccC
Q 022495          124 GSAKLSEAIGD-DSEAVVCATGFQPGW---DLFA------PWKA---INLVEACRKRGV-NRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       124 ~~~~~~~~~~~-~~d~vv~~ag~~~~~---~~~~------~~~~---~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~  189 (296)
                       .+.+.+++.+ ++|+||||||.....   ....      ..+.   .+++++|++.++ ++|||+||.++|+.... +.
T Consensus        89 -~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~-~~  166 (404)
T 1i24_A           89 -FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DI  166 (404)
T ss_dssp             -HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CB
T ss_pred             -HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCC-CC
Confidence             8888888865 599999999964321   1111      1112   899999999887 59999999999986542 22


Q ss_pred             Chhh-------------hhhhhhHHHHHHHHHHHHHHHH----hCCcEEEEecCcccCCCCCC-----------------
Q 022495          190 NPAY-------------IFLNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTG-----------------  235 (296)
Q Consensus       190 ~~~~-------------~~~~~~~~y~~sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~~~-----------------  235 (296)
                      .+..             .+..+.+.|+.+|+++|.+++.    .++++++|||+.+||+....                 
T Consensus       167 ~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~  246 (404)
T 1i24_A          167 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF  246 (404)
T ss_dssp             CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred             CccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccch
Confidence            2210             1345567899999999987753    59999999999999986421                 


Q ss_pred             -c--------------eeecccCccccCCcCHHHHHHHHHHHhcCCCCCC--CeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          236 -N--------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSY--KVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       236 -~--------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~--~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                       .              +...+.......+++++|+|++++.++..+...+  ++||+++    ..+++.|+++.+.+
T Consensus       247 ~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~----~~~s~~e~~~~i~~  319 (404)
T 1i24_A          247 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT----EQFSVNELASLVTK  319 (404)
T ss_dssp             CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS----EEEEHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC----CCCcHHHHHHHHHH
Confidence             0              0011222233568999999999999998765445  6888865    56999999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=7.8e-30  Score=224.68  Aligned_cols=227  Identities=16%  Similarity=0.127  Sum_probs=164.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC----CCCCeEEE-EcccCCChHHHHHHhcCCCC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIV-KADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~-~~D~~d~~~~~~~~~~~~~d  137 (296)
                      .+++|+||||||+||||++++++|+++|++|++++|+.++...+...    ...+++++ .+|++| .+.+.+++++ +|
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~-~d   85 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK-QGAYDEVIKG-AA   85 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS-TTTTTTTTTT-CS
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC-hHHHHHHHcC-CC
Confidence            34678999999999999999999999999999999987654322110    12578888 899999 8889998988 99


Q ss_pred             EEEEcCCCCCCCCC-cchh--HH---HHHHHHHHH-cCCCEEEEEccceeccCccC----ccCChhh-------------
Q 022495          138 AVVCATGFQPGWDL-FAPW--KA---INLVEACRK-RGVNRFILISSILVNGAAMG----QILNPAY-------------  193 (296)
Q Consensus       138 ~vv~~ag~~~~~~~-~~~~--~~---~~~l~~~~~-~~~~~iV~~SS~~~~~~~~~----~~~~~~~-------------  193 (296)
                      +||||||....... ....  +.   .++++++++ .++++|||+||.++|+....    .+.++..             
T Consensus        86 ~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  165 (342)
T 1y1p_A           86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP  165 (342)
T ss_dssp             EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred             EEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccc
Confidence            99999996543211 1111  11   899999985 57889999999998854321    2233322             


Q ss_pred             --hhhhhhHHHHHHHHHHHHHHHHh------CCcEEEEecCcccCCCCCCc----ee-------ecc------cCccccC
Q 022495          194 --IFLNVFGLTLIAKLQAEQYIRKS------GINYTIIRPGGLRNEPPTGN----II-------MET------EDTLYEG  248 (296)
Q Consensus       194 --~~~~~~~~y~~sK~~~e~~~~~~------~~~~~~lrp~~i~g~~~~~~----~~-------~~~------~~~~~~~  248 (296)
                        .+..+.+.|+.+|.++|.+++..      +++++++||+.+||+.....    ..       ...      .......
T Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (342)
T 1y1p_A          166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY  245 (342)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEE
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCC
Confidence              12456789999999999987542      78999999999999864321    00       000      0012345


Q ss_pred             CcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          249 TISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       249 ~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +++++|+|++++.++..+...+..+ +..   +..+++.|+++.+.+
T Consensus       246 ~v~v~Dva~a~~~~~~~~~~~g~~~-~~~---g~~~s~~e~~~~i~~  288 (342)
T 1y1p_A          246 YVSAVDIGLLHLGCLVLPQIERRRV-YGT---AGTFDWNTVLATFRK  288 (342)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCSCEE-EEC---CEEECHHHHHHHHHH
T ss_pred             EeEHHHHHHHHHHHHcCcccCCceE-EEe---CCCCCHHHHHHHHHH
Confidence            8999999999999998765445444 333   467999999998875

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.97  E-value=2e-30  Score=226.23  Aligned_cols=212  Identities=15%  Similarity=0.124  Sum_probs=145.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag  144 (296)
                      +|+||||||+||||++++++|+++|++|++++|+...         .+  ++.+|++| .+.+.+++++ ++|+||||||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~--~~~~Dl~d-~~~~~~~~~~~~~d~vih~A~   69 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------PK--FEQVNLLD-SNAVHHIIHDFQPHVIVHCAA   69 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------CHHHHHHHCCSEEEECC-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------CC--eEEecCCC-HHHHHHHHHhhCCCEEEECCc
Confidence            5799999999999999999999999999999987543         12  78899999 7888888764 4899999999


Q ss_pred             CCCCC----CCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 022495          145 FQPGW----DLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK  215 (296)
Q Consensus       145 ~~~~~----~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  215 (296)
                      .....    +......     ..++++++++.++ +|||+||..+|+.. ..+.++. .+..+.+.|+.+|.++|.+++.
T Consensus        70 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~-~~~~~E~-~~~~~~~~Y~~sK~~~e~~~~~  146 (315)
T 2ydy_A           70 ERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGT-NPPYREE-DIPAPLNLYGKTKLDGEKAVLE  146 (315)
T ss_dssp             ------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSS-SCSBCTT-SCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCC-CCCCCCC-CCCCCcCHHHHHHHHHHHHHHH
Confidence            64321    1111111     1899999999886 99999999999873 3333333 2345677899999999999999


Q ss_pred             hCCcEEEEecCcccCCCCC---Cc---ee---e-cc-----cCccccCCcCHHHHHHHHHHHhcCC---CCCCCeEEEEe
Q 022495          216 SGINYTIIRPGGLRNEPPT---GN---II---M-ET-----EDTLYEGTISRDQVAEVAVEALLHP---ESSYKVVEIIS  277 (296)
Q Consensus       216 ~~~~~~~lrp~~i~g~~~~---~~---~~---~-~~-----~~~~~~~~i~~~Dva~~i~~~l~~~---~~~~~~~~i~~  277 (296)
                      .++++++|||+.+||+...   +.   +.   . ..     .......+++++|+|++++.++.++   ...+++|++.+
T Consensus       147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~  226 (315)
T 2ydy_A          147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSG  226 (315)
T ss_dssp             HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCC
T ss_pred             hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcC
Confidence            9999999999999987543   11   10   0 00     0122346899999999999988753   24567899887


Q ss_pred             CCCCCCCCHHHHHHHhhc
Q 022495          278 RVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       278 ~~~~~~~~~~el~~~i~~  295 (296)
                         +..+++.|+++.+.+
T Consensus       227 ---~~~~s~~e~~~~i~~  241 (315)
T 2ydy_A          227 ---NEQMTKYEMACAIAD  241 (315)
T ss_dssp             ---SCCBCHHHHHHHHHH
T ss_pred             ---CCcccHHHHHHHHHH
Confidence               689999999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.97  E-value=7.1e-29  Score=205.73  Aligned_cols=201  Identities=18%  Similarity=0.249  Sum_probs=155.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHH-HCCCeEEEEEcCcc-hhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLL-AKGFAVKAGVRDLD-KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++|+|+||||+|+||++++++|+ ++|++|++++|+++ +..++.. ...++.++.+|++| .+.+.+++++ +|+||||
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d-~~~~~~~~~~-~d~vv~~   80 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-DHERVTVIEGSFQN-PGXLEQAVTN-AEVVFVG   80 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH-TSTTEEEEECCTTC-HHHHHHHHTT-CSEEEES
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc-CCCceEEEECCCCC-HHHHHHHHcC-CCEEEEc
Confidence            35679999999999999999999 89999999999988 6654421 23689999999999 8999999999 9999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH-HHHHHHHHHHHHHHHhCCcEE
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG-LTLIAKLQAEQYIRKSGINYT  221 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~~~  221 (296)
                      ||..      ... .++++++|++.++++||++||..+|+...... .+ . ...... .|+.+|.++|.++++.+++++
T Consensus        81 ag~~------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~-~~-~-~~~~~~~~y~~~K~~~e~~~~~~~i~~~  150 (221)
T 3r6d_A           81 AMES------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVAL-EK-W-TFDNLPISYVQGERQARNVLRESNLNYT  150 (221)
T ss_dssp             CCCC------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHH-HH-H-HHHTSCHHHHHHHHHHHHHHHHSCSEEE
T ss_pred             CCCC------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccc-cc-c-cccccccHHHHHHHHHHHHHHhCCCCEE
Confidence            9853      111 68999999999999999999998886432210 00 0 111222 799999999999999999999


Q ss_pred             EEecCcccCCCCCCceeecccC-ccccCCcCHHHHHHHHHHHh--cCCC-CCCCeEEEEeC
Q 022495          222 IIRPGGLRNEPPTGNIIMETED-TLYEGTISRDQVAEVAVEAL--LHPE-SSYKVVEIISR  278 (296)
Q Consensus       222 ~lrp~~i~g~~~~~~~~~~~~~-~~~~~~i~~~Dva~~i~~~l--~~~~-~~~~~~~i~~~  278 (296)
                      +||||+++++...+.+...... .....+++++|+|++++.++  .++. ..++.+.+.++
T Consensus       151 ~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~  211 (221)
T 3r6d_A          151 ILRLTWLYNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEP  211 (221)
T ss_dssp             EEEECEEECCTTCCCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECT
T ss_pred             EEechhhcCCCCCcceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCC
Confidence            9999999997444433332222 22234799999999999999  7765 45566777653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.97  E-value=6.4e-30  Score=223.29  Aligned_cols=212  Identities=17%  Similarity=0.121  Sum_probs=160.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch---hhhccc--CCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK---AKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +++|+|||||||||||++++++|+++|++|++++|+...   ....+.  ....+++++.+|++           + +|+
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------~-~d~   72 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------D-VRL   72 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------T-EEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------c-CCE
Confidence            457899999999999999999999999999999998762   111110  01234455555544           5 999


Q ss_pred             EEEcCCCCCC------CCCcchhHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHH
Q 022495          139 VVCATGFQPG------WDLFAPWKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       139 vv~~ag~~~~------~~~~~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~  209 (296)
                      |||+|+....      ...... +.   .+++++|++.++++|||+||.++|+...+.+.++.. +..+.+.|+.+|.++
T Consensus        73 vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~-~~~p~~~Y~~sK~~~  150 (321)
T 3vps_A           73 VYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDS-PLSPRSPYAASKVGL  150 (321)
T ss_dssp             EEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTS-CCCCCSHHHHHHHHH
T ss_pred             EEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCC-CCCCCChhHHHHHHH
Confidence            9999986531      111112 33   999999999999999999999999987665555543 456678899999999


Q ss_pred             HHHHHH----hCC-cEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHHHHHHHHHHhcCCCCC
Q 022495          210 EQYIRK----SGI-NYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESS  269 (296)
Q Consensus       210 e~~~~~----~~~-~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~  269 (296)
                      |++++.    .++ +++++||+.+||+.....               +...........+++++|+|++++.++..+.. 
T Consensus       151 E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-  229 (321)
T 3vps_A          151 EMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-  229 (321)
T ss_dssp             HHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-
T ss_pred             HHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-
Confidence            998865    588 999999999999865431               11122233445789999999999999998765 


Q ss_pred             CCeEEEEeCCCCCCCCHHHHHHHhh
Q 022495          270 YKVVEIISRVDAPKRSYEDLFGSIK  294 (296)
Q Consensus       270 ~~~~~i~~~~~~~~~~~~el~~~i~  294 (296)
                      + +||+++   +..+++.|+++.+.
T Consensus       230 g-~~~i~~---~~~~s~~e~~~~i~  250 (321)
T 3vps_A          230 S-VVNFGS---GQSLSVNDVIRILQ  250 (321)
T ss_dssp             S-EEEESC---SCCEEHHHHHHHHH
T ss_pred             C-eEEecC---CCcccHHHHHHHHH
Confidence            5 999988   68899999999885

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=3e-29  Score=223.67  Aligned_cols=223  Identities=16%  Similarity=0.125  Sum_probs=164.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-----hhcccC---CCCCeEEEEcccCCChHHHHHHhcC-CC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-----KTTLSK---DNPSLQIVKADVTEGSAKLSEAIGD-DS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~-~~  136 (296)
                      ||+||||||+||||++++++|+++|++|++++|+....     ..+...   ...++.++.+|++| .+.+.+++++ ++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~   79 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSD-TSNLTRILREVQP   79 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSC-HHHHHHHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCC-HHHHHHHHHhcCC
Confidence            47899999999999999999999999999999986542     111100   12578999999999 8999988875 47


Q ss_pred             CEEEEcCCCCCCCCCc-ch---hHH-----HHHHHHHHHcCC---CEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          137 EAVVCATGFQPGWDLF-AP---WKA-----INLVEACRKRGV---NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~-~~---~~~-----~~~l~~~~~~~~---~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      |+||||||........ ..   ...     .++++++++.++   ++||++||.++|+...+.+.++. .+..+.+.|+.
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~-~~~~~~~~Y~~  158 (372)
T 1db3_A           80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-TPFYPRSPYAV  158 (372)
T ss_dssp             SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-SCCCCCSHHHH
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCcc-CCCCCCChHHH
Confidence            9999999965432111 11   111     889999999887   89999999999987654444443 23455778999


Q ss_pred             HHHHHHHHHH----HhCCcEEEEecCcccCCCCCCce-------------------eecccCccccCCcCHHHHHHHHHH
Q 022495          205 AKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       205 sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~-------------------~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      +|.++|.+++    +.+++++++|++.+||+......                   ...........+++++|+|++++.
T Consensus       159 sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~  238 (372)
T 1db3_A          159 AKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWM  238 (372)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHH
Confidence            9999998875    35899999999999987533211                   011112333568999999999999


Q ss_pred             HhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          262 ALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       262 ~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++..+.  +.+||+++   +..+++.|+++.+.+
T Consensus       239 ~~~~~~--~~~~ni~~---~~~~s~~e~~~~i~~  267 (372)
T 1db3_A          239 MLQQEQ--PEDFVIAT---GVQYSVRQFVEMAAA  267 (372)
T ss_dssp             TTSSSS--CCCEEECC---CCCEEHHHHHHHHHH
T ss_pred             HHhcCC--CceEEEcC---CCceeHHHHHHHHHH
Confidence            998764  36899988   688999999999875

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=2.9e-29  Score=221.27  Aligned_cols=224  Identities=13%  Similarity=0.063  Sum_probs=168.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh-ccc--CCCCCeEEEEcccCCChHHHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-TLS--KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv  140 (296)
                      ++|+||||||+||||++++++|+++|++|++++|++..... .+.  ....+++++.+|++| .+.+.+++++ ++|+||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE-FSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC-HHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCC-HHHHHHHHHhcCCCEEE
Confidence            47899999999999999999999999999999998764321 110  023478999999999 8999988875 379999


Q ss_pred             EcCCCCCCC----CCcchhHH-----HHHHHHHHHcCC-CEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHH
Q 022495          141 CATGFQPGW----DLFAPWKA-----INLVEACRKRGV-NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAE  210 (296)
Q Consensus       141 ~~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e  210 (296)
                      ||||.....    +.......     .++++++++.++ ++|||+||.++||.....+.++. .+..+.+.|+.+|.++|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-~~~~~~~~Y~~sK~~~e  159 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEK-TPFYPRSPYAVAKLFGH  159 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTT-SCCCCCSHHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCcc-CCCCCCChhHHHHHHHH
Confidence            999965311    11111111     889999998886 89999999999987655444443 24456778999999999


Q ss_pred             HHHHH----hCCcEEEEecCcccCCCCCCcee-------------------ecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          211 QYIRK----SGINYTIIRPGGLRNEPPTGNII-------------------METEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       211 ~~~~~----~~~~~~~lrp~~i~g~~~~~~~~-------------------~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      .+++.    .+++++++|+.+++|+.......                   ..........+++++|+|++++.++..+.
T Consensus       160 ~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~  239 (345)
T 2z1m_A          160 WITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE  239 (345)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            88753    58999999999999875332110                   11111223458999999999999998764


Q ss_pred             CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          268 SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       268 ~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                        +.+||+++   +..+++.|+++.+.+
T Consensus       240 --~~~~~i~~---~~~~s~~e~~~~i~~  262 (345)
T 2z1m_A          240 --PDDYVIAT---GETHTVREFVEKAAK  262 (345)
T ss_dssp             --CCCEEECC---SCCEEHHHHHHHHHH
T ss_pred             --CceEEEeC---CCCccHHHHHHHHHH
Confidence              36899988   688999999998864

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.97  E-value=1.9e-29  Score=224.01  Aligned_cols=222  Identities=14%  Similarity=0.101  Sum_probs=165.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcc--hhhhccc-CCCCCeEEEEcccCCChHHHHHHhc--CCCCEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLD--KAKTTLS-KDNPSLQIVKADVTEGSAKLSEAIG--DDSEAVV  140 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d~vv  140 (296)
                      |+||||||+||||+++++.|+++ |++|++++|...  ....+.. ....+++++.+|++| .+.+.++++  + +|+||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~-~d~vi   78 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD-SAEITRIFEQYQ-PDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC-HHHHHHHHHHHC-CSEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCC-HHHHHHHHhhcC-CCEEE
Confidence            47999999999999999999998 799999998752  2222111 013579999999999 899999987  7 99999


Q ss_pred             EcCCCCCCC----CCcchhHH-----HHHHHHHHHc--CCC-------EEEEEccceeccCccC--c--------cCChh
Q 022495          141 CATGFQPGW----DLFAPWKA-----INLVEACRKR--GVN-------RFILISSILVNGAAMG--Q--------ILNPA  192 (296)
Q Consensus       141 ~~ag~~~~~----~~~~~~~~-----~~~l~~~~~~--~~~-------~iV~~SS~~~~~~~~~--~--------~~~~~  192 (296)
                      ||||.....    +.......     .++++++.+.  +++       +|||+||.++||....  .        +.++.
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~  158 (361)
T 1kew_A           79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence            999975310    11111111     8999999988  776       9999999999986431  0        22332


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHH----hCCcEEEEecCcccCCCCCCc-e--------------eecccCccccCCcCHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTGN-I--------------IMETEDTLYEGTISRD  253 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~~~~-~--------------~~~~~~~~~~~~i~~~  253 (296)
                       .+..+.+.|+.+|.++|.+++.    .++++++|||+.+||+..... .              ...........+++++
T Consensus       159 -~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  237 (361)
T 1kew_A          159 -TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE  237 (361)
T ss_dssp             -SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred             -CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHH
Confidence             2445677899999999988764    599999999999999864321 0              0111122234689999


Q ss_pred             HHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          254 QVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       254 Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |+|++++.++..+. .+++|++.+   +..+++.|+++.+.+
T Consensus       238 Dva~a~~~~~~~~~-~g~~~~v~~---~~~~s~~e~~~~i~~  275 (361)
T 1kew_A          238 DHARALHMVVTEGK-AGETYNIGG---HNEKKNLDVVFTICD  275 (361)
T ss_dssp             HHHHHHHHHHHHCC-TTCEEEECC---CCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCC-CCCEEEecC---CCeeeHHHHHHHHHH
Confidence            99999999997653 577999988   688999999998864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=9e-30  Score=221.38  Aligned_cols=215  Identities=16%  Similarity=0.167  Sum_probs=162.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhh-hcccCCCCCeEEEEcccCCChHHHHHHhcC----CCCEEEE
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAK-TTLSKDNPSLQIVKADVTEGSAKLSEAIGD----DSEAVVC  141 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----~~d~vv~  141 (296)
                      +||||||+||||++++++|+++| ++|++++|...... ..+    .++. +.+|++| .+.+.+++++    ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~----~~~~-~~~d~~~-~~~~~~~~~~~~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL----VDLN-IADYMDK-EDFLIQIMAGEEFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH----HTSC-CSEEEEH-HHHHHHHHTTCCCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc----Ccce-ecccccc-HHHHHHHHhccccCCCcEEEE
Confidence            58999999999999999999999 99999999875431 111    1233 7799999 8888888863    4999999


Q ss_pred             cCCCCCCCCCc--chhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH
Q 022495          142 ATGFQPGWDLF--APWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR  214 (296)
Q Consensus       142 ~ag~~~~~~~~--~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  214 (296)
                      |||........  ....     ..++++++++.++ +|||+||.++|+.....+.++.. +..|.+.|+.+|.++|.+++
T Consensus        75 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~-~~~p~~~Y~~sK~~~e~~~~  152 (310)
T 1eq2_A           75 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESRE-YEKPLNVYGYSKFLFDEYVR  152 (310)
T ss_dssp             CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGG-GCCCSSHHHHHHHHHHHHHH
T ss_pred             CcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCC-CCCCCChhHHHHHHHHHHHH
Confidence            99975432111  1111     1899999999998 99999999999876554444433 45667889999999999886


Q ss_pred             H----hCCcEEEEecCcccCCCCCC-----ce--------------eecccCcc-ccCCcCHHHHHHHHHHHhcCCCCCC
Q 022495          215 K----SGINYTIIRPGGLRNEPPTG-----NI--------------IMETEDTL-YEGTISRDQVAEVAVEALLHPESSY  270 (296)
Q Consensus       215 ~----~~~~~~~lrp~~i~g~~~~~-----~~--------------~~~~~~~~-~~~~i~~~Dva~~i~~~l~~~~~~~  270 (296)
                      .    .+++++++||+++||+....     ..              ........ ...+++++|+|++++.++..+.  +
T Consensus       153 ~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--~  230 (310)
T 1eq2_A          153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--S  230 (310)
T ss_dssp             HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--C
T ss_pred             HHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--C
Confidence            4    48999999999999986431     11              01112223 4578999999999999998765  6


Q ss_pred             CeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          271 KVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       271 ~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++||+.+   +..+++.|+++.+.+
T Consensus       231 ~~~~i~~---~~~~s~~e~~~~i~~  252 (310)
T 1eq2_A          231 GIFNLGT---GRAESFQAVADATLA  252 (310)
T ss_dssp             EEEEESC---SCCBCHHHHHHHC--
T ss_pred             CeEEEeC---CCccCHHHHHHHHHH
Confidence            7999987   688999999999875

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=2.6e-29  Score=231.37  Aligned_cols=227  Identities=14%  Similarity=0.175  Sum_probs=170.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHC---CCeEEEEEcCcchhh------hcccC------------CCCCeEEEEccc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAK---GFAVKAGVRDLDKAK------TTLSK------------DNPSLQIVKADV  121 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~---g~~V~~~~r~~~~~~------~~~~~------------~~~~~~~~~~D~  121 (296)
                      ..++|+||||||+||||++++++|+++   |++|++++|+.....      +.+..            ...++.++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            456899999999999999999999999   899999999876432      11110            125899999999


Q ss_pred             C------CChHHHHHHhcCCCCEEEEcCCCCCCCCCcch--hHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCC
Q 022495          122 T------EGSAKLSEAIGDDSEAVVCATGFQPGWDLFAP--WKA---INLVEACRKRGVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       122 ~------d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~--~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                      +      | .+.+.+++++ +|+||||||..........  .++   .+++++|++.++++|||+||.++|+........
T Consensus       150 ~~~~~gld-~~~~~~~~~~-~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~  227 (478)
T 4dqv_A          150 SEPDLGLD-QPMWRRLAET-VDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFT  227 (478)
T ss_dssp             TSGGGGCC-HHHHHHHHHH-CCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCC
T ss_pred             CCcccCCC-HHHHHHHHcC-CCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcC
Confidence            8      5 5688888988 9999999997544222222  222   999999999999999999999999875554444


Q ss_pred             hhhhhhhhh-----------HHHHHHHHHHHHHHHH----hCCcEEEEecCcccCCCC-CCc-----e----e-------
Q 022495          191 PAYIFLNVF-----------GLTLIAKLQAEQYIRK----SGINYTIIRPGGLRNEPP-TGN-----I----I-------  238 (296)
Q Consensus       191 ~~~~~~~~~-----------~~y~~sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~-~~~-----~----~-------  238 (296)
                      ++. +..+.           +.|+.+|+++|.++++    .+++++++|||+|||+.. .+.     .    +       
T Consensus       228 E~~-~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g  306 (478)
T 4dqv_A          228 EDA-DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATG  306 (478)
T ss_dssp             SSS-CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHC
T ss_pred             Ccc-cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcC
Confidence            432 22232           3499999999998864    599999999999999743 111     0    0       


Q ss_pred             -eccc----------CccccCCcCHHHHHHHHHHHhcC----CCCCCCeEEEEeCCCCCC--CCHHHHHHHhhc
Q 022495          239 -METE----------DTLYEGTISRDQVAEVAVEALLH----PESSYKVVEIISRVDAPK--RSYEDLFGSIKQ  295 (296)
Q Consensus       239 -~~~~----------~~~~~~~i~~~Dva~~i~~~l~~----~~~~~~~~~i~~~~~~~~--~~~~el~~~i~~  295 (296)
                       .+..          ......+++++|+|++++.++..    +...+++||+++   +..  +++.|+++.+.+
T Consensus       307 ~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~---~~~~~~s~~el~~~l~~  377 (478)
T 4dqv_A          307 IAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMN---PHDDGIGLDEYVDWLIE  377 (478)
T ss_dssp             EEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESC---CCCSSCSHHHHHHHHHH
T ss_pred             cccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecC---CCCCCcCHHHHHHHHHH
Confidence             0000          02334679999999999999876    555678999988   455  999999998875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.97  E-value=2.2e-29  Score=222.26  Aligned_cols=220  Identities=13%  Similarity=0.130  Sum_probs=162.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      .+++|+||||||+||||++++++|+++|++|++++|..........  ....+++++.+|+.| ..     +.+ +|+||
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~-----~~~-~d~vi   96 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-PL-----YIE-VDQIY   96 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS-CC-----CCC-CSEEE
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCC-hh-----hcC-CCEEE
Confidence            3567899999999999999999999999999999997543221111  023578999999998 42     567 99999


Q ss_pred             EcCCCCCCC----CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh----hhhhhhHHHHHHHH
Q 022495          141 CATGFQPGW----DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAKL  207 (296)
Q Consensus       141 ~~ag~~~~~----~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~----~~~~~~~~y~~sK~  207 (296)
                      ||||.....    +.....  +.   .++++++++.++ +|||+||.++|+.....+.++..    .+..+.+.|+.+|+
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  175 (343)
T 2b69_A           97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR  175 (343)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHH
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHH
Confidence            999964321    111111  11   899999999886 99999999999876544444432    24556788999999


Q ss_pred             HHHHHHH----HhCCcEEEEecCcccCCCCCC---ce--------------eecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          208 QAEQYIR----KSGINYTIIRPGGLRNEPPTG---NI--------------IMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       208 ~~e~~~~----~~~~~~~~lrp~~i~g~~~~~---~~--------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ++|.+++    +.+++++++||+.+||+....   ..              ...........+++++|+|++++.++..+
T Consensus       176 ~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  255 (343)
T 2b69_A          176 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN  255 (343)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence            9998874    469999999999999985321   11              11112223346899999999999998765


Q ss_pred             CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          267 ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       267 ~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .  +.+|++++   +..+++.|+++.+.+
T Consensus       256 ~--~~~~~i~~---~~~~s~~e~~~~i~~  279 (343)
T 2b69_A          256 V--SSPVNLGN---PEEHTILEFAQLIKN  279 (343)
T ss_dssp             C--CSCEEESC---CCEEEHHHHHHHHHH
T ss_pred             C--CCeEEecC---CCCCcHHHHHHHHHH
Confidence            3  56899988   688999999998875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=1.2e-29  Score=218.24  Aligned_cols=201  Identities=21%  Similarity=0.252  Sum_probs=159.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +|+||||+||||++++++|+++  |++|++++|++++...+..   .+++++.+|++| .+++.+++++ +|+|||+|+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d-~~~~~~~~~~-~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA---QGITVRQADYGD-EAALTSALQG-VEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH---TTCEEEECCTTC-HHHHHHHTTT-CSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc---CCCeEEEcCCCC-HHHHHHHHhC-CCEEEEeCCC
Confidence            5899999999999999999998  9999999998876544322   468999999999 8999999999 9999999985


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEec
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRP  225 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp  225 (296)
                      ...   ......++++++|++.++++||++||..+|..               ...|+.+|.++|+++++.+++++++||
T Consensus        76 ~~~---~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---------------~~~y~~sK~~~e~~~~~~~~~~~ilrp  137 (286)
T 2zcu_A           76 EVG---QRAPQHRNVINAAKAAGVKFIAYTSLLHADTS---------------PLGLADEHIETEKMLADSGIVYTLLRN  137 (286)
T ss_dssp             ---------CHHHHHHHHHHHHTCCEEEEEEETTTTTC---------------CSTTHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred             Cch---HHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC---------------cchhHHHHHHHHHHHHHcCCCeEEEeC
Confidence            321   11122389999999999999999999987621               124889999999999999999999999


Q ss_pred             CcccCCCC--------CCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          226 GGLRNEPP--------TGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       226 ~~i~g~~~--------~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.++++..        .+.+.. ........+++++|+|++++.++.++...+++|++.+   +..+++.|+++.+.+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~---~~~~s~~e~~~~i~~  211 (286)
T 2zcu_A          138 GWYSENYLASAPAALEHGVFIG-AAGDGKIASATRADYAAAAARVISEAGHEGKVYELAG---DSAWTLTQLAAELTK  211 (286)
T ss_dssp             CCBHHHHHTTHHHHHHHTEEEE-SCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECC---SSCBCHHHHHHHHHH
T ss_pred             hHHhhhhHHHhHHhhcCCceec-cCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeC---CCcCCHHHHHHHHHH
Confidence            98776421        111221 2223345789999999999999988766678999988   678999999998865

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=2.3e-29  Score=224.80  Aligned_cols=222  Identities=15%  Similarity=0.045  Sum_probs=167.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-----hhhcccC----CCCCeEEEEcccCCChHHHHHHhcC-CC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-----AKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD-DS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~-~~  136 (296)
                      |+||||||+||||+++++.|+++|++|++++|++..     ...+...    ...++.++.+|++| .+.+.+++++ ++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD-STCLVKIINEVKP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTC-HHHHHHHHHHHCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCC-HHHHHHHHHhcCC
Confidence            789999999999999999999999999999998653     1111100    12578999999999 8999988875 47


Q ss_pred             CEEEEcCCCCCCC----CCcchhHH-----HHHHHHHHHcCC---CEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          137 EAVVCATGFQPGW----DLFAPWKA-----INLVEACRKRGV---NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       137 d~vv~~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~~---~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      |+||||||.....    +.......     .++++++++.++   ++|||+||.++|+.....+.+++. +..+.+.|+.
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~-~~~~~~~Y~~  182 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETT-PFYPRSPYGA  182 (375)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTS-CCCCCSHHHH
T ss_pred             CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccC-CCCCCChhHH
Confidence            9999999964321    11111111     899999999887   899999999999876544444433 3455678999


Q ss_pred             HHHHHHHHHHH----hCCcEEEEecCcccCCCCCCce-------------------eecccCccccCCcCHHHHHHHHHH
Q 022495          205 AKLQAEQYIRK----SGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       205 sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~~~~~-------------------~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      +|+++|.+++.    .+++++++||+.+||+......                   ...+.......+++++|+|++++.
T Consensus       183 sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~  262 (375)
T 1t2a_A          183 AKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWL  262 (375)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHH
Confidence            99999988753    5999999999999997533211                   011112233568999999999999


Q ss_pred             HhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          262 ALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       262 ~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +++.+.  +.+||+++   +..+++.|+++.+.+
T Consensus       263 ~~~~~~--~~~~ni~~---~~~~s~~e~~~~i~~  291 (375)
T 1t2a_A          263 MLQNDE--PEDFVIAT---GEVHSVREFVEKSFL  291 (375)
T ss_dssp             HHHSSS--CCCEEECC---SCCEEHHHHHHHHHH
T ss_pred             HHhcCC--CceEEEeC---CCcccHHHHHHHHHH
Confidence            998765  36899988   688999999998864

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=1.7e-29  Score=223.32  Aligned_cols=213  Identities=18%  Similarity=0.172  Sum_probs=163.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc----hhhhcccCCCCCeEEEEcccCCChHHHHHHhc--CCCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD----KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d  137 (296)
                      |++|+||||||||+||+++++.|+++|++|++++|++.    +..........+++++.+|++| .+++.++++  + +|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d-~~~l~~~~~~~~-~d   85 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE-QEAMEKILKEHE-ID   85 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC-HHHHHHHHHHTT-CC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC-HHHHHHHHhhCC-CC
Confidence            34679999999999999999999999999999999872    2221111123689999999999 999999999  8 99


Q ss_pred             EEEEcCCCCCCCCCcchhHHHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          138 AVVCATGFQPGWDLFAPWKAINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      +|||+++..      ......+++++|++.+ +++||+ |+   ||...    ++ ..+..+...|+.+|+.+|+++++.
T Consensus        86 ~Vi~~a~~~------n~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~e-~~~~~p~~~y~~sK~~~e~~l~~~  150 (346)
T 3i6i_A           86 IVVSTVGGE------SILDQIALVKAMKAVGTIKRFLP-SE---FGHDV----NR-ADPVEPGLNMYREKRRVRQLVEES  150 (346)
T ss_dssp             EEEECCCGG------GGGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT----TT-CCCCTTHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCchh------hHHHHHHHHHHHHHcCCceEEee-cc---cCCCC----Cc-cCcCCCcchHHHHHHHHHHHHHHc
Confidence            999999863      2222389999999999 999986 43   44321    11 123345678999999999999999


Q ss_pred             CCcEEEEecCcccCCCCCC------------ceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCC
Q 022495          217 GINYTIIRPGGLRNEPPTG------------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKR  284 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~------------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~  284 (296)
                      +++++++|||.++|.....            .+...........+++++|+|++++.++.++...++++++.+.  ++.+
T Consensus       151 g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~--~~~~  228 (346)
T 3i6i_A          151 GIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPS--CNCL  228 (346)
T ss_dssp             TCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCG--GGEE
T ss_pred             CCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCC--CCCC
Confidence            9999999999999864221            1122223333456899999999999999998777788888742  4789


Q ss_pred             CHHHHHHHhhc
Q 022495          285 SYEDLFGSIKQ  295 (296)
Q Consensus       285 ~~~el~~~i~~  295 (296)
                      ++.|+++.+++
T Consensus       229 s~~e~~~~~~~  239 (346)
T 3i6i_A          229 NINELASVWEK  239 (346)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999999875

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.96  E-value=9.8e-30  Score=224.02  Aligned_cols=225  Identities=18%  Similarity=0.187  Sum_probs=160.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh----hhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA----KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      |+||||||+||||++++++|+++|++|++++|.....    ..+......++.++.+|++| .+.+.+++++ ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN-EALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC-HHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCC-HHHHHHHhhccCCCEEEE
Confidence            4799999999999999999999999999998753221    11100012468899999999 8888888863 3999999


Q ss_pred             cCCCCCCC----CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH
Q 022495          142 ATGFQPGW----DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY  212 (296)
Q Consensus       142 ~ag~~~~~----~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  212 (296)
                      |||.....    +.....  +.   .+++++|++.++++||++||.++|+.....+.++......+.+.|+.+|+++|.+
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~  159 (338)
T 1udb_A           80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQI  159 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHH
Confidence            99964311    111111  11   8899999998989999999999998654444444332212267899999999998


Q ss_pred             HHH----h-CCcEEEEecCcccCCCCC--------C---cee---------------ecc------cCccccCCcCHHHH
Q 022495          213 IRK----S-GINYTIIRPGGLRNEPPT--------G---NII---------------MET------EDTLYEGTISRDQV  255 (296)
Q Consensus       213 ~~~----~-~~~~~~lrp~~i~g~~~~--------~---~~~---------------~~~------~~~~~~~~i~~~Dv  255 (296)
                      ++.    . +++++++||+++||+...        +   .+.               ...      .......++|++|+
T Consensus       160 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv  239 (338)
T 1udb_A          160 LTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_dssp             HHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHH
Confidence            764    3 799999999999987321        0   000               000      01122358999999


Q ss_pred             HHHHHHHhcCCC--CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          256 AEVAVEALLHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       256 a~~i~~~l~~~~--~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |++++.+++.+.  ..+++||+++   +..+++.|+++.+.+
T Consensus       240 a~a~~~~l~~~~~~~~~~~yni~~---~~~~s~~e~~~~i~~  278 (338)
T 1udb_A          240 ADGHVVAMEKLANKPGVHIYNLGA---GVGNSVLDVVNAFSK  278 (338)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEESC---SCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhccCCCcEEEecC---CCceeHHHHHHHHHH
Confidence            999999887532  2236899987   688999999998864

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.96  E-value=1e-29  Score=221.86  Aligned_cols=214  Identities=17%  Similarity=0.186  Sum_probs=161.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--CCCCEEEEcC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDSEAVVCAT  143 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d~vv~~a  143 (296)
                      +||||||+||||++++++|+++  |++|++++|+....        .++.++.+|++| .+.+.++++  + +|+|||+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------~~~~~~~~D~~d-~~~~~~~~~~~~-~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT--------GGIKFITLDVSN-RDEIDRAVEKYS-IDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC--------TTCCEEECCTTC-HHHHHHHHHHTT-CCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc--------cCceEEEecCCC-HHHHHHHHhhcC-CcEEEECC
Confidence            5899999999999999999999  89999999876432        257889999999 899999987  6 99999999


Q ss_pred             CCCCCC---CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-
Q 022495          144 GFQPGW---DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-  214 (296)
Q Consensus       144 g~~~~~---~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-  214 (296)
                      +.....   +.....  +.   .++++++++.++++|||+||..+|+........++..+..+.+.|+.+|.++|.+++ 
T Consensus        71 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  150 (317)
T 3ajr_A           71 GILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQY  150 (317)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHH
Confidence            864311   111111  11   899999999999999999999999865322222233345667889999999998775 


Q ss_pred             ---HhCCcEEEEecCcccCCCCC--C-----------------ceeecccCccccCCcCHHHHHHHHHHHhcCCCC---C
Q 022495          215 ---KSGINYTIIRPGGLRNEPPT--G-----------------NIIMETEDTLYEGTISRDQVAEVAVEALLHPES---S  269 (296)
Q Consensus       215 ---~~~~~~~~lrp~~i~g~~~~--~-----------------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~---~  269 (296)
                         +.+++++++||+++||+...  .                 .............+++++|+|++++.++..+..   .
T Consensus       151 ~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~  230 (317)
T 3ajr_A          151 YYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVL  230 (317)
T ss_dssp             HHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSS
T ss_pred             HHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccccc
Confidence               46999999999999995321  0                 011111122334689999999999999987653   2


Q ss_pred             CCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          270 YKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       270 ~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.+||+.+    ..+++.|+++.+.+
T Consensus       231 g~~~~i~~----~~~s~~e~~~~i~~  252 (317)
T 3ajr_A          231 RNGYNVTA----YTFTPSELYSKIKE  252 (317)
T ss_dssp             CSCEECCS----EEECHHHHHHHHHT
T ss_pred             CceEecCC----ccccHHHHHHHHHH
Confidence            47899875    46899999999875

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.96  E-value=2.4e-29  Score=221.54  Aligned_cols=224  Identities=19%  Similarity=0.217  Sum_probs=156.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh---hcccCC--CCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLSKD--NPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ++|+||||||+||||++++++|+++|++|++++|+++...   .+....  ..+++++.+|++| .+.+.+++++ +|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLAD-EGSFDEAIKG-CTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTS-TTTTHHHHTT-CSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCC-HHHHHHHHcC-CCEE
Confidence            5789999999999999999999999999999999876321   111101  1358899999999 8889999999 9999


Q ss_pred             EEcCCCCCCCCCcc---hh--HH---HHHHHHHHHcC-CCEEEEEcccee-ccCcc-CccCChhhh-------hh-hhhH
Q 022495          140 VCATGFQPGWDLFA---PW--KA---INLVEACRKRG-VNRFILISSILV-NGAAM-GQILNPAYI-------FL-NVFG  200 (296)
Q Consensus       140 v~~ag~~~~~~~~~---~~--~~---~~~l~~~~~~~-~~~iV~~SS~~~-~~~~~-~~~~~~~~~-------~~-~~~~  200 (296)
                      ||+|+.........   ..  ++   .+++++|++.+ +++|||+||.++ |+... ..+.++...       +. .+..
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (337)
T 2c29_D           82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW  161 (337)
T ss_dssp             EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred             EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccc
Confidence            99998642211110   11  12   89999999887 899999999974 44321 112222210       01 1345


Q ss_pred             HHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCcee---------ecccCccc-----cCCcCHHHHHHHHHHH
Q 022495          201 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNII---------METEDTLY-----EGTISRDQVAEVAVEA  262 (296)
Q Consensus       201 ~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~~---------~~~~~~~~-----~~~i~~~Dva~~i~~~  262 (296)
                      .|+.+|.++|.++.    ++++++++|||+.+||+.....+.         ..+....+     ..+++++|+|++++.+
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHH
Confidence            79999999998764    469999999999999986433211         00111111     1289999999999999


Q ss_pred             hcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          263 LLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       263 l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++.+...+ .|++.+    ...++.|+++.+.+
T Consensus       242 ~~~~~~~~-~~~~~~----~~~s~~e~~~~i~~  269 (337)
T 2c29_D          242 FENPKAEG-RYICSS----HDCIILDLAKMLRE  269 (337)
T ss_dssp             HHCTTCCE-EEEECC----EEEEHHHHHHHHHH
T ss_pred             hcCcccCc-eEEEeC----CCCCHHHHHHHHHH
Confidence            98754433 565433    45899999998864

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=8.7e-30  Score=220.72  Aligned_cols=212  Identities=17%  Similarity=0.218  Sum_probs=161.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhh-cccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKT-TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +|+|+||||||+||++++++|+++| ++|++++|++++... .+  ...+++++.+|++| .+++.+++++ +|+||||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l--~~~~~~~~~~D~~d-~~~l~~~~~~-~d~vi~~a   80 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKEL--RLQGAEVVQGDQDD-QVIMELALNG-AYATFIVT   80 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHH--HHTTCEEEECCTTC-HHHHHHHHTT-CSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHH--HHCCCEEEEecCCC-HHHHHHHHhc-CCEEEEeC
Confidence            5799999999999999999999999 999999999765321 11  12578999999999 8999999999 99999999


Q ss_pred             CCCCCCCCcc-hhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEE
Q 022495          144 GFQPGWDLFA-PWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTI  222 (296)
Q Consensus       144 g~~~~~~~~~-~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~  222 (296)
                      +......... ....++++++|++.++++||++|+..+|+...+          .+...|+.+|.++|+++++.++++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~----------~~~~~y~~sK~~~e~~~~~~gi~~~i  150 (299)
T 2wm3_A           81 NYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG----------RLAAAHFDGKGEVEEYFRDIGVPMTS  150 (299)
T ss_dssp             CHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT----------SCCCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC----------cccCchhhHHHHHHHHHHHCCCCEEE
Confidence            8432111111 112289999999999999999888776653211          11345889999999999999999999


Q ss_pred             EecCcccCCCCCCc-----------eeecccCccccCCcCHHHHHHHHHHHhcCCC-CCCCeEEEEeCCCCCCCCHHHHH
Q 022495          223 IRPGGLRNEPPTGN-----------IIMETEDTLYEGTISRDQVAEVAVEALLHPE-SSYKVVEIISRVDAPKRSYEDLF  290 (296)
Q Consensus       223 lrp~~i~g~~~~~~-----------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~-~~~~~~~i~~~~~~~~~~~~el~  290 (296)
                      ||||+++|+.....           ....+.......+++++|+|++++.++.++. ..+++|++.+    +.+++.|++
T Consensus       151 lrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g----~~~s~~e~~  226 (299)
T 2wm3_A          151 VRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST----CRHTAEEYA  226 (299)
T ss_dssp             EECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS----EEECHHHHH
T ss_pred             EeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee----ccCCHHHHH
Confidence            99999998642210           0111112233468999999999999998753 3577888865    469999999


Q ss_pred             HHhhc
Q 022495          291 GSIKQ  295 (296)
Q Consensus       291 ~~i~~  295 (296)
                      +.+.+
T Consensus       227 ~~~~~  231 (299)
T 2wm3_A          227 ALLTK  231 (299)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98875

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=2.2e-29  Score=228.78  Aligned_cols=223  Identities=15%  Similarity=0.158  Sum_probs=163.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh---hc---c---------cCCCCCeEEEEcccCCChHHH
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TT---L---------SKDNPSLQIVKADVTEGSAKL  128 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~---~---------~~~~~~~~~~~~D~~d~~~~~  128 (296)
                      ..+|+||||||+||||++++++|+++|++|++++|++....   .+   +         .....++.++.+|++| .+.+
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l  145 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFEC-MDDV  145 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC----CCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCC-cccC
Confidence            34689999999999999999999999999999999987221   10   0         0013689999999999 6666


Q ss_pred             HHHhcCCCCEEEEcCCCCCCCCC---cchhHH---HHHHHHHHHcCCCEEEEEccceeccCcc-----CccCChhhh--h
Q 022495          129 SEAIGDDSEAVVCATGFQPGWDL---FAPWKA---INLVEACRKRGVNRFILISSILVNGAAM-----GQILNPAYI--F  195 (296)
Q Consensus       129 ~~~~~~~~d~vv~~ag~~~~~~~---~~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~-----~~~~~~~~~--~  195 (296)
                      . .+.+ +|+||||||.......   ....++   .+++++|++ ++++|||+||.++ |...     ..+..+...  +
T Consensus       146 ~-~~~~-~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~  221 (427)
T 4f6c_A          146 V-LPEN-MDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKG  221 (427)
T ss_dssp             C-CSSC-CSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSS
T ss_pred             C-CcCC-CCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccccC
Confidence            6 6677 9999999997542221   112222   899999998 7789999999988 4321     122223221  1


Q ss_pred             hhhhHHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCCCce--------e------------ec-ccCccccCCcC
Q 022495          196 LNVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTGNI--------I------------ME-TEDTLYEGTIS  251 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~---~~~~~~~lrp~~i~g~~~~~~~--------~------------~~-~~~~~~~~~i~  251 (296)
                      ..+.+.|+.+|+++|.++++   .|++++++|||+|+|+...+..        .            ++ ........+++
T Consensus       222 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  301 (427)
T 4f6c_A          222 QLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSF  301 (427)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEE
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEee
Confidence            33678899999999998875   7999999999999998654421        0            00 00133356899


Q ss_pred             HHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          252 RDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++|+|++++.++..+. .+++|++.+   +.++++.|+++.+.+
T Consensus       302 v~DvA~ai~~~~~~~~-~g~~~~l~~---~~~~s~~el~~~i~~  341 (427)
T 4f6c_A          302 VDTTARQIVALAQVNT-PQIIYHVLS---PNKMPVKSLLECVKR  341 (427)
T ss_dssp             HHHHHHHHHHHTTSCC-CCSEEEESC---SCCEEHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHcCCC-CCCEEEecC---CCCCcHHHHHHHHHH
Confidence            9999999999998877 788999998   689999999999875

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.96  E-value=8.3e-30  Score=220.65  Aligned_cols=208  Identities=12%  Similarity=0.070  Sum_probs=161.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |+||||||+||||++++++|+ +|++|++++|++.              ++.+|++| .+.+.+++++ ++|+|||+||.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------~~~~D~~d-~~~~~~~~~~~~~d~vih~a~~   64 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------EFCGDFSN-PKGVAETVRKLRPDVIVNAAAH   64 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------SSCCCTTC-HHHHHHHHHHHCCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------cccccCCC-HHHHHHHHHhcCCCEEEECccc
Confidence            489999999999999999999 8999999999752              24689999 8889888874 49999999986


Q ss_pred             CCC----CCCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          146 QPG----WDLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       146 ~~~----~~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      ...    .+......     ..++++++++.++ +|||+||.++|+...+.+.++.. +..|.+.|+.+|.++|+++++.
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~  142 (299)
T 1n2s_A           65 TAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETD-ATSPLNVYGKTKLAGEKALQDN  142 (299)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTS-CCCCSSHHHHHHHHHHHHHHHH
T ss_pred             CCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCC-CCCCccHHHHHHHHHHHHHHHh
Confidence            542    11111111     1899999999887 89999999999876554444433 4556778999999999999988


Q ss_pred             CCcEEEEecCcccCCCCCCce-----------eecccCccccCCcCHHHHHHHHHHHhcCCC--C-CCCeEEEEeCCCCC
Q 022495          217 GINYTIIRPGGLRNEPPTGNI-----------IMETEDTLYEGTISRDQVAEVAVEALLHPE--S-SYKVVEIISRVDAP  282 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~~~-----------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--~-~~~~~~i~~~~~~~  282 (296)
                      ..+++++||+++||+...+.+           ...........+++++|+|++++.++..+.  . .+++||+.+   ++
T Consensus       143 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~---~~  219 (299)
T 1n2s_A          143 CPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVA---GG  219 (299)
T ss_dssp             CSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCC---BS
T ss_pred             CCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeC---CC
Confidence            889999999999998543211           000111234578999999999999998752  2 367899888   68


Q ss_pred             CCCHHHHHHHhhc
Q 022495          283 KRSYEDLFGSIKQ  295 (296)
Q Consensus       283 ~~~~~el~~~i~~  295 (296)
                      .+++.|+++.+.+
T Consensus       220 ~~s~~e~~~~i~~  232 (299)
T 1n2s_A          220 TTTWHDYAALVFD  232 (299)
T ss_dssp             CEEHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            8999999998865

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.96  E-value=7e-30  Score=217.82  Aligned_cols=195  Identities=21%  Similarity=0.200  Sum_probs=152.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +|+||||||+||||++++++|+++|++|++++|++.+.   .   ..++.++.+|++| .+.+.+++++ +|+||||||.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~---~~~~~~~~~Dl~d-~~~~~~~~~~-~d~vi~~a~~   73 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---A---EAHEEIVACDLAD-AQAVHDLVKD-CDGIIHLGGV   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---C---CTTEEECCCCTTC-HHHHHHHHTT-CSEEEECCSC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---c---CCCccEEEccCCC-HHHHHHHHcC-CCEEEECCcC
Confidence            46899999999999999999999999999999987542   1   1468899999999 8999999999 9999999997


Q ss_pred             CCCCCCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCcc-CccCChhhhhhhhhHHHHHHHHHHHHHHH----H
Q 022495          146 QPGWDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAM-GQILNPAYIFLNVFGLTLIAKLQAEQYIR----K  215 (296)
Q Consensus       146 ~~~~~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~-~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~  215 (296)
                      ............     .++++++++.++++|||+||..+|+... ..+.++. .+..+.+.|+.+|.++|.+++    +
T Consensus        74 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~  152 (267)
T 3ay3_A           74 SVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTE-VPRRPDSLYGLSKCFGEDLASLYYHK  152 (267)
T ss_dssp             CSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHH
Confidence            532221111111     8999999999999999999999997643 2233333 345567789999999998875    3


Q ss_pred             hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          216 SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       216 ~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      .++++++|||+++|+...        .......+++++|+|++++.++..+...+.++++.+
T Consensus       153 ~gi~~~~lrp~~v~~~~~--------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~  206 (267)
T 3ay3_A          153 FDIETLNIRIGSCFPKPK--------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGAS  206 (267)
T ss_dssp             TCCCEEEEEECBCSSSCC--------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECC
T ss_pred             cCCCEEEEeceeecCCCC--------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCC
Confidence            689999999999985321        112234689999999999999988755455777765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.96  E-value=1.1e-29  Score=219.17  Aligned_cols=202  Identities=18%  Similarity=0.190  Sum_probs=159.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--CCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~~d~vv~~a  143 (296)
                      -++||||||+||||++++++|+++|++|++++|+                  .+|++| .+.+.++++  + +|+|||||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~Dl~d-~~~~~~~~~~~~-~d~vih~A   71 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------DLDITN-VLAVNKFFNEKK-PNVVINCA   71 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------TCCTTC-HHHHHHHHHHHC-CSEEEECC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------cCCCCC-HHHHHHHHHhcC-CCEEEECC
Confidence            4799999999999999999999999999999886                  279999 899999888  6 99999999


Q ss_pred             CCCCCC----CCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH
Q 022495          144 GFQPGW----DLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR  214 (296)
Q Consensus       144 g~~~~~----~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  214 (296)
                      |.....    +......     ..++++++++.++ +|||+||.++|+.....+.++.. +..+.+.|+.+|.++|.+++
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~-~~~~~~~Y~~sK~~~E~~~~  149 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFD-EVNPQSAYGKTKLEGENFVK  149 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTS-CCCCCSHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCC-CCCCccHHHHHHHHHHHHHH
Confidence            964321    1111111     1899999999887 99999999999876544444433 34567789999999999999


Q ss_pred             HhCCcEEEEecCcccCCCCCCce-----------eecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCC
Q 022495          215 KSGINYTIIRPGGLRNEPPTGNI-----------IMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPK  283 (296)
Q Consensus       215 ~~~~~~~~lrp~~i~g~~~~~~~-----------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~  283 (296)
                      ..+.++++|||+.+||+ ..+.+           ...........+++++|+|++++.++..+  .+++|++.+   +..
T Consensus       150 ~~~~~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~---~~~  223 (292)
T 1vl0_A          150 ALNPKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTC---KGI  223 (292)
T ss_dssp             HHCSSEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT--CCEEEECCC---BSC
T ss_pred             hhCCCeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC--CCcEEEecC---CCC
Confidence            98889999999999987 22211           00001123356899999999999999876  567899887   688


Q ss_pred             CCHHHHHHHhhc
Q 022495          284 RSYEDLFGSIKQ  295 (296)
Q Consensus       284 ~~~~el~~~i~~  295 (296)
                      +++.|+++.+.+
T Consensus       224 ~s~~e~~~~i~~  235 (292)
T 1vl0_A          224 CSWYDFAVEIFR  235 (292)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHH
Confidence            999999998865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=6.8e-29  Score=219.37  Aligned_cols=210  Identities=18%  Similarity=0.239  Sum_probs=161.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHC-CC-eEEEEEcCcchhhhcccC-CCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAK-GF-AVKAGVRDLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      .+++|+||||||+|+||++++++|+++ |+ +|++++|++.+...+... ...++.++.+|++| .+.+.+++++ +|+|
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~-~D~V   95 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD-LERLNYALEG-VDIC   95 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC-HHHHHHHTTT-CSEE
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC-HHHHHHHHhc-CCEE
Confidence            356899999999999999999999999 97 999999997765432210 23589999999999 8999999998 9999


Q ss_pred             EEcCCCCCCC----CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHH
Q 022495          140 VCATGFQPGW----DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAE  210 (296)
Q Consensus       140 v~~ag~~~~~----~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e  210 (296)
                      ||+||.....    ......  +.   .++++++.+.++++||++||..++.               |.+.|+.+|+++|
T Consensus        96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~---------------p~~~Y~~sK~~~E  160 (344)
T 2gn4_A           96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN---------------PINLYGATKLCSD  160 (344)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS---------------CCSHHHHHHHHHH
T ss_pred             EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC---------------CccHHHHHHHHHH
Confidence            9999965311    111111  11   8999999999999999999975432               2456999999999


Q ss_pred             HHHHH-------hCCcEEEEecCcccCCCCC-----------Cc--eeecccCccccCCcCHHHHHHHHHHHhcCCCCCC
Q 022495          211 QYIRK-------SGINYTIIRPGGLRNEPPT-----------GN--IIMETEDTLYEGTISRDQVAEVAVEALLHPESSY  270 (296)
Q Consensus       211 ~~~~~-------~~~~~~~lrp~~i~g~~~~-----------~~--~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~  270 (296)
                      .+++.       .++++++||||+++|+...           +.  +... .......+++++|+|++++.++..+. .+
T Consensus       161 ~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g  238 (344)
T 2gn4_A          161 KLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GG  238 (344)
T ss_dssp             HHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SS
T ss_pred             HHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CC
Confidence            99864       4699999999999997532           11  1111 12223458999999999999998754 56


Q ss_pred             CeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          271 KVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       271 ~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .+|++.+    ..+++.|+++.+.+
T Consensus       239 ~~~~~~~----~~~s~~el~~~i~~  259 (344)
T 2gn4_A          239 EIFVPKI----PSMKMTDLAKALAP  259 (344)
T ss_dssp             CEEEECC----CEEEHHHHHHHHCT
T ss_pred             CEEecCC----CcEEHHHHHHHHHH
Confidence            7888755    35999999998864

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.96  E-value=7e-29  Score=237.04  Aligned_cols=224  Identities=14%  Similarity=0.201  Sum_probs=169.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH-HHHHhcCCCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK-LSEAIGDDSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~-~~~~~~~~~d~vv~  141 (296)
                      +++|+||||||+||||++++++|+++ |++|++++|+..+...+.  ...+++++.+|++| .+. +.+++++ +|+|||
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~--~~~~v~~v~~Dl~d-~~~~~~~~~~~-~D~Vih  388 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--NHPHFHFVEGDISI-HSEWIEYHVKK-CDVVLP  388 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT--TCTTEEEEECCTTT-CHHHHHHHHHH-CSEEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc--cCCceEEEECCCCC-cHHHHHHhhcC-CCEEEE
Confidence            46789999999999999999999998 899999999887654433  24579999999999 654 7778888 999999


Q ss_pred             cCCCCCCC----CCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh------hhhhhHHHHHHH
Q 022495          142 ATGFQPGW----DLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI------FLNVFGLTLIAK  206 (296)
Q Consensus       142 ~ag~~~~~----~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~------~~~~~~~y~~sK  206 (296)
                      |||.....    +......     ..+++++|++.+ ++|||+||.++|+.....+.++...      ...+.+.|+.+|
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK  467 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  467 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence            99965421    1111111     189999999988 8999999999998765444444331      124567899999


Q ss_pred             HHHHHHHH----HhCCcEEEEecCcccCCCCCC---------ce--------------eecccCccccCCcCHHHHHHHH
Q 022495          207 LQAEQYIR----KSGINYTIIRPGGLRNEPPTG---------NI--------------IMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       207 ~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~---------~~--------------~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                      .++|.+++    +.+++++++|||++||+....         ..              ...........+++++|+|+++
T Consensus       468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai  547 (660)
T 1z7e_A          468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence            99998874    469999999999999986431         10              0111122334689999999999


Q ss_pred             HHHhcCCC--CCCCeEEEEeCCCCC-CCCHHHHHHHhhc
Q 022495          260 VEALLHPE--SSYKVVEIISRVDAP-KRSYEDLFGSIKQ  295 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~~~~~~-~~~~~el~~~i~~  295 (296)
                      +.++..+.  ..+++|++.+   ++ .+++.|+++.+.+
T Consensus       548 ~~~l~~~~~~~~g~~~ni~~---~~~~~s~~el~~~i~~  583 (660)
T 1z7e_A          548 YRIIENAGNRCDGEIINIGN---PENEASIEELGEMLLA  583 (660)
T ss_dssp             HHHHHCGGGTTTTEEEEECC---GGGEEEHHHHHHHHHH
T ss_pred             HHHHhCccccCCCeEEEECC---CCCCcCHHHHHHHHHH
Confidence            99998764  3567999987   55 7999999998864

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.96  E-value=3.2e-29  Score=221.09  Aligned_cols=223  Identities=12%  Similarity=0.123  Sum_probs=165.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCC-------CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc-C
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKG-------FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-D  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~  134 (296)
                      .+++|+||||||+||||++++++|+++|       ++|++++|+.......   ...++.++.+|++| .+.+.+++. +
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~---~~~~~~~~~~Dl~d-~~~~~~~~~~~   86 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG---FSGAVDARAADLSA-PGEAEKLVEAR   86 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT---CCSEEEEEECCTTS-TTHHHHHHHTC
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc---cCCceeEEEcCCCC-HHHHHHHHhcC
Confidence            4568899999999999999999999999       8999999986543221   23578999999999 888998884 7


Q ss_pred             CCCEEEEcCCCCCCC---CCcchhHH-----HHHHHHHHHcC-----CCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          135 DSEAVVCATGFQPGW---DLFAPWKA-----INLVEACRKRG-----VNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~---~~~~~~~~-----~~~l~~~~~~~-----~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                       +|+||||||.....   +.......     .++++++++.+     +++|||+||.++|+.....+.+++. +..+.+.
T Consensus        87 -~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~-~~~~~~~  164 (342)
T 2hrz_A           87 -PDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEF-HTTPLTS  164 (342)
T ss_dssp             -CSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTC-CCCCSSH
T ss_pred             -CCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCC-CCCCcch
Confidence             99999999965311   11111111     88999998876     7899999999999875444444433 4456778


Q ss_pred             HHHHHHHHHHHHHH----hCCcEEEEecCcccC-CCCCC----ce--------------eecccCccccCCcCHHHHHHH
Q 022495          202 TLIAKLQAEQYIRK----SGINYTIIRPGGLRN-EPPTG----NI--------------IMETEDTLYEGTISRDQVAEV  258 (296)
Q Consensus       202 y~~sK~~~e~~~~~----~~~~~~~lrp~~i~g-~~~~~----~~--------------~~~~~~~~~~~~i~~~Dva~~  258 (296)
                      |+.+|.++|.++++    .+++++++|++.++| +....    .+              ...........+++++|+|++
T Consensus       165 Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~  244 (342)
T 2hrz_A          165 YGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGF  244 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHH
Confidence            99999999998764    378999999999987 32211    00              011111223347899999999


Q ss_pred             HHHHhcCCCC---CCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          259 AVEALLHPES---SYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       259 i~~~l~~~~~---~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++.++..+..   .+.+||+.+    ..+++.|+++.+.+
T Consensus       245 ~~~~~~~~~~~~~~~~~~ni~g----~~~s~~e~~~~i~~  280 (342)
T 2hrz_A          245 LIHGAMIDVEKVGPRRNLSMPG----LSATVGEQIEALRK  280 (342)
T ss_dssp             HHHHHHSCHHHHCSCCEEECCC----EEEEHHHHHHHHHH
T ss_pred             HHHHHhccccccCCccEEEcCC----CCCCHHHHHHHHHH
Confidence            9999987643   467899843    56999999998864

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.96  E-value=9.2e-29  Score=221.37  Aligned_cols=221  Identities=15%  Similarity=0.073  Sum_probs=165.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-----hhhcccC---CCC-CeEEEEcccCCChHHHHHHhcC-CC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-----AKTTLSK---DNP-SLQIVKADVTEGSAKLSEAIGD-DS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~---~~~-~~~~~~~D~~d~~~~~~~~~~~-~~  136 (296)
                      |+||||||+||||+++++.|+++|++|++++|+..+     ...+...   ... ++.++.+|++| .+.+.+++++ ++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~  107 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD-ASSLRRWIDVIKP  107 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTC-HHHHHHHHHHHCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCC-HHHHHHHHHhcCC
Confidence            799999999999999999999999999999998754     2211110   012 78999999999 8999988875 47


Q ss_pred             CEEEEcCCCCCCC----CCcchhHH-----HHHHHHHHHcCCC-----EEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          137 EAVVCATGFQPGW----DLFAPWKA-----INLVEACRKRGVN-----RFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       137 d~vv~~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~~~-----~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |+||||||.....    +.......     .++++++++.+++     +|||+||.++|+...+ +.++. .+..+.+.|
T Consensus       108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~-~~~~~~~~Y  185 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSET-TPFHPRSPY  185 (381)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTT-SCCCCCSHH
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCC-CCCCCCCch
Confidence            9999999965421    11111111     8889998887654     9999999999987654 44443 244567789


Q ss_pred             HHHHHHHHHHHHH----hCCcEEEEecCcccCCCCCCce-------------------eecccCccccCCcCHHHHHHHH
Q 022495          203 LIAKLQAEQYIRK----SGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       203 ~~sK~~~e~~~~~----~~~~~~~lrp~~i~g~~~~~~~-------------------~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                      +.+|.++|.+++.    .+++++++|++.++|+......                   ...+.......+++++|+|+++
T Consensus       186 ~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~  265 (381)
T 1n7h_A          186 AASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM  265 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHH
Confidence            9999999988754    5899999999999997533211                   0011112334689999999999


Q ss_pred             HHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          260 VEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       260 ~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.++..+.  +.+|++++   +..+++.|+++.+.+
T Consensus       266 ~~~~~~~~--~~~~~i~~---~~~~s~~e~~~~i~~  296 (381)
T 1n7h_A          266 WLMLQQEK--PDDYVVAT---EEGHTVEEFLDVSFG  296 (381)
T ss_dssp             HHHHTSSS--CCEEEECC---SCEEEHHHHHHHHHH
T ss_pred             HHHHhCCC--CCeEEeeC---CCCCcHHHHHHHHHH
Confidence            99998765  36899988   688999999998864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.96  E-value=2.8e-28  Score=210.12  Aligned_cols=205  Identities=19%  Similarity=0.183  Sum_probs=156.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      |+||||||||+||+++++.|+++ |++|++++|++++...+.   ..+++++.+|++| .+.+.+++++ +|+||||||.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~---~~~v~~~~~D~~d-~~~l~~~~~~-~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW---RGKVSVRQLDYFN-QESMVEAFKG-MDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG---BTTBEEEECCTTC-HHHHHHHTTT-CSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh---hCCCEEEEcCCCC-HHHHHHHHhC-CCEEEEeCCC
Confidence            57999999999999999999998 999999999988765543   3689999999999 8999999999 9999999986


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEec
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRP  225 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp  225 (296)
                      ..... ......++++++|++.++++|||+||.+.   ....+.       .    +...+..+|..+++.++++++|||
T Consensus        76 ~~~~~-~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~~~~~-------~----~~~~~~~~e~~~~~~g~~~~ilrp  140 (289)
T 3e48_A           76 IHPSF-KRIPEVENLVYAAKQSGVAHIIFIGYYAD---QHNNPF-------H----MSPYFGYASRLLSTSGIDYTYVRM  140 (289)
T ss_dssp             CCSHH-HHHHHHHHHHHHHHHTTCCEEEEEEESCC---STTCCS-------T----THHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             Cccch-hhHHHHHHHHHHHHHcCCCEEEEEcccCC---CCCCCC-------c----cchhHHHHHHHHHHcCCCEEEEec
Confidence            43211 01122289999999999999999999542   111111       0    112233667777889999999999


Q ss_pred             CcccCCCCC-------CceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          226 GGLRNEPPT-------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       226 ~~i~g~~~~-------~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |+++|+...       ......+.......+++++|+|++++.++.++...+++|++. +   ..+++.|+++.+.+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~---~~~s~~e~~~~~~~  213 (289)
T 3e48_A          141 AMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-G---YSYDMKELAAILSE  213 (289)
T ss_dssp             CEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-C---EEEEHHHHHHHHHH
T ss_pred             cccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-C---CcCCHHHHHHHHHH
Confidence            999996321       011111222334568999999999999999887668899998 3   78999999998865

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.96  E-value=1.8e-28  Score=205.97  Aligned_cols=195  Identities=16%  Similarity=0.233  Sum_probs=148.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      .+++|+|+||||+|+||++++++|+++|+  +|++++|++++.....   ..++.++.+|++| .+.+.+++++ +|+||
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~d-~~~~~~~~~~-~d~vi   89 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---YKNVNQEVVDFEK-LDDYASAFQG-HDVGF   89 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---GGGCEEEECCGGG-GGGGGGGGSS-CSEEE
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---cCCceEEecCcCC-HHHHHHHhcC-CCEEE
Confidence            35678999999999999999999999999  9999999987654322   2468899999999 8999999998 99999


Q ss_pred             EcCCCCCCCCC-cchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH
Q 022495          141 CATGFQPGWDL-FAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR  214 (296)
Q Consensus       141 ~~ag~~~~~~~-~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  214 (296)
                      ||||....... .....     ..++++++++.++++||++||.++|+..              ...|+.+|+++|.+++
T Consensus        90 ~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~--------------~~~Y~~sK~~~e~~~~  155 (242)
T 2bka_A           90 CCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS--------------NFLYLQVKGEVEAKVE  155 (242)
T ss_dssp             ECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC--------------SSHHHHHHHHHHHHHH
T ss_pred             ECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC--------------cchHHHHHHHHHHHHH
Confidence            99996432110 00111     1889999999998999999999887521              2459999999999999


Q ss_pred             HhCC-cEEEEecCcccCCCCCCce---ee----cccCc--cccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          215 KSGI-NYTIIRPGGLRNEPPTGNI---IM----ETEDT--LYEGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       215 ~~~~-~~~~lrp~~i~g~~~~~~~---~~----~~~~~--~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      ..++ ++++||||.++|+......   ..    .....  ....+++++|+|++++.++.++.. +..+.+.+
T Consensus       156 ~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~  227 (242)
T 2bka_A          156 ELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  227 (242)
T ss_dssp             TTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             hcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc-cCeeEeeH
Confidence            9999 5999999999998532211   00    00010  013479999999999999987764 33554443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.96  E-value=1.2e-28  Score=215.38  Aligned_cols=223  Identities=17%  Similarity=0.167  Sum_probs=153.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-Ccch---hhhcccCC--CCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDK---AKTTLSKD--NPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~---~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      +|+||||||+||||++++++|+++|++|++++| +++.   ........  ..+++++.+|++| .+.+.+++++ +|+|
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~-~d~v   78 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSN-PDSFAAAIEG-CVGI   78 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTC-GGGGHHHHTT-CSEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCC-HHHHHHHHcC-CCEE
Confidence            478999999999999999999999999999998 6532   11111001  1257889999999 8999999999 9999


Q ss_pred             EEcCCCCCCC--CCcc-hh--HH---HHHHHHHHHc-CCCEEEEEccceec-cCcc-CccCChhhh-------hhhhh-H
Q 022495          140 VCATGFQPGW--DLFA-PW--KA---INLVEACRKR-GVNRFILISSILVN-GAAM-GQILNPAYI-------FLNVF-G  200 (296)
Q Consensus       140 v~~ag~~~~~--~~~~-~~--~~---~~~l~~~~~~-~~~~iV~~SS~~~~-~~~~-~~~~~~~~~-------~~~~~-~  200 (296)
                      ||+|+.....  +... ..  ++   .+++++|++. ++++|||+||.+++ +... ..+.++...       +..+. .
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~  158 (322)
T 2p4h_X           79 FHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGW  158 (322)
T ss_dssp             EECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred             EEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccc
Confidence            9999743211  1111 11  22   8999999988 78999999998754 3211 112222210       11222 2


Q ss_pred             HHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCcee---------ecccCc----cccCCcCHHHHHHHHHHHh
Q 022495          201 LTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNII---------METEDT----LYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       201 ~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~~---------~~~~~~----~~~~~i~~~Dva~~i~~~l  263 (296)
                      .|+.+|.++|.++.    +++++++++||+++||+.......         ......    ....+++++|+|++++.++
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~  238 (322)
T 2p4h_X          159 NYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLL  238 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHh
Confidence            69999999998764    368999999999999986432210         000000    1114899999999999999


Q ss_pred             cCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          264 LHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       264 ~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ..+...+ .|+ .+   +..+++.|+++.+.+
T Consensus       239 ~~~~~~g-~~~-~~---~~~~s~~e~~~~i~~  265 (322)
T 2p4h_X          239 ENSVPGG-RYN-CS---PFIVPIEEMSQLLSA  265 (322)
T ss_dssp             HSCCCCE-EEE-CC---CEEEEHHHHHHHHHH
T ss_pred             hCcCCCC-CEE-Ec---CCCCCHHHHHHHHHH
Confidence            7755444 466 34   467999999998864

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.96  E-value=3.8e-28  Score=210.94  Aligned_cols=211  Identities=18%  Similarity=0.257  Sum_probs=157.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-------chhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-------DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +|+|+||||||+||++++++|+++|++|++++|++       ++...+......+++++.+|++| .+++.+++++ +|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-~~~l~~~~~~-~d~   79 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND-HETLVKAIKQ-VDI   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC-HHHHHHHHTT-CSE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC-HHHHHHHHhC-CCE
Confidence            57899999999999999999999999999999987       33221110012578999999999 8999999999 999


Q ss_pred             EEEcCCCCCCCCCcchhHHHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhC
Q 022495          139 VVCATGFQPGWDLFAPWKAINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSG  217 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~  217 (296)
                      ||||+|...      .....+++++|++.| +++||+ |+   ||....    +..........| .+|..+|+++++.+
T Consensus        80 vi~~a~~~~------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~----~~~~~~p~~~~y-~sK~~~e~~~~~~~  144 (307)
T 2gas_A           80 VICAAGRLL------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDVD----RHDAVEPVRQVF-EEKASIRRVIEAEG  144 (307)
T ss_dssp             EEECSSSSC------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCTT----SCCCCTTHHHHH-HHHHHHHHHHHHHT
T ss_pred             EEECCcccc------cccHHHHHHHHHhcCCceEEee-cc---cccCcc----cccCCCcchhHH-HHHHHHHHHHHHcC
Confidence            999998643      222389999999998 999984 33   442211    101111124568 99999999999999


Q ss_pred             CcEEEEecCcccCCCCCC------------ceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCC
Q 022495          218 INYTIIRPGGLRNEPPTG------------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       218 ~~~~~lrp~~i~g~~~~~------------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~  285 (296)
                      +++++||||.++++....            .+...........+++++|+|++++.++.++...++++++.+.  ++.++
T Consensus       145 i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~--~~~~s  222 (307)
T 2gas_A          145 VPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLP--KNYLT  222 (307)
T ss_dssp             CCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCG--GGEEE
T ss_pred             CCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCC--CCcCC
Confidence            999999999988753211            1111122233356899999999999999887666777777652  36799


Q ss_pred             HHHHHHHhhc
Q 022495          286 YEDLFGSIKQ  295 (296)
Q Consensus       286 ~~el~~~i~~  295 (296)
                      +.|+++.+++
T Consensus       223 ~~e~~~~~~~  232 (307)
T 2gas_A          223 QNEVIALWEK  232 (307)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.96  E-value=1.2e-28  Score=228.65  Aligned_cols=222  Identities=14%  Similarity=0.158  Sum_probs=165.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh---c------------ccCCCCCeEEEEcccCCChHHHH
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---T------------LSKDNPSLQIVKADVTEGSAKLS  129 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~------------~~~~~~~~~~~~~D~~d~~~~~~  129 (296)
                      .+|+|||||||||||++|+++|+++|++|++++|++.+...   +            ......+++++.+|++| .+.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFEC-MDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTB-CSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcc-cccCC
Confidence            35799999999999999999999999999999999873211   0            00123689999999999 66666


Q ss_pred             HHhcCCCCEEEEcCCCCCCCC---CcchhHH---HHHHHHHHHcCCCEEEEEccceeccCcc-----CccCChhhh--hh
Q 022495          130 EAIGDDSEAVVCATGFQPGWD---LFAPWKA---INLVEACRKRGVNRFILISSILVNGAAM-----GQILNPAYI--FL  196 (296)
Q Consensus       130 ~~~~~~~d~vv~~ag~~~~~~---~~~~~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~-----~~~~~~~~~--~~  196 (296)
                       .+.+ +|+|||||+......   .....++   ++++++|++ +.++|||+||.++ |...     ..+..+...  +.
T Consensus       228 -~~~~-~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~  303 (508)
T 4f6l_B          228 -LPEN-MDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQ  303 (508)
T ss_dssp             -CSSC-CSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSB
T ss_pred             -CccC-CCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccccccc
Confidence             5666 999999999654221   1112222   999999998 6689999999998 4321     122223221  13


Q ss_pred             hhhHHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCCCce--------------------eec-ccCccccCCcCH
Q 022495          197 NVFGLTLIAKLQAEQYIRK---SGINYTIIRPGGLRNEPPTGNI--------------------IME-TEDTLYEGTISR  252 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~---~~~~~~~lrp~~i~g~~~~~~~--------------------~~~-~~~~~~~~~i~~  252 (296)
                      .+.+.|+.+|+++|+++++   .|++++++|||.++|+...+.+                    ..+ ........++++
T Consensus       304 ~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v  383 (508)
T 4f6l_B          304 LLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFV  383 (508)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEH
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcH
Confidence            3678899999999998865   7999999999999998654320                    011 112334568999


Q ss_pred             HHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          253 DQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +|+|++++.++..+. .+++||+.+   +..+++.|+++.+.+
T Consensus       384 ~DvA~ai~~~~~~~~-~~~~~nl~~---~~~~s~~el~~~i~~  422 (508)
T 4f6l_B          384 DTTARQIVALAQVNT-PQIIYHVLS---PNKMPVKSLLECVKR  422 (508)
T ss_dssp             HHHHHHHHHHTTBCC-SCSEEEESC---SCEEEHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCCC-CCCEEEeCC---CCCCCHHHHHHHHHH
Confidence            999999999998877 778999999   688999999999875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.96  E-value=3e-28  Score=212.21  Aligned_cols=215  Identities=18%  Similarity=0.228  Sum_probs=158.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-----hhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-----KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      +|+|+||||||+||++++++|+++|++|++++|+..     +...+......+++++.+|++| .+++.+++++ +|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~l~~~~~~-~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD-HQRLVDALKQ-VDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSC-HHHHHHHHTT-CSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCC-HHHHHHHHhC-CCEEE
Confidence            578999999999999999999999999999999853     2211110013579999999999 8999999999 99999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh-hHHHHHHHHHHHHHHHHhCC
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV-FGLTLIAKLQAEQYIRKSGI  218 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~-~~~y~~sK~~~e~~~~~~~~  218 (296)
                      |+++......  .....++++++|++.| +++||+ |+   ||...... .   .+..+ ...| .+|.++|+++++.++
T Consensus        82 ~~a~~~~~~~--~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~~~-~---~~~~p~~~~y-~sK~~~e~~~~~~g~  150 (313)
T 1qyd_A           82 SALAGGVLSH--HILEQLKLVEAIKEAGNIKRFLP-SE---FGMDPDIM-E---HALQPGSITF-IDKRKVRRAIEAASI  150 (313)
T ss_dssp             ECCCCSSSST--TTTTHHHHHHHHHHSCCCSEEEC-SC---CSSCTTSC-C---CCCSSTTHHH-HHHHHHHHHHHHTTC
T ss_pred             ECCccccchh--hHHHHHHHHHHHHhcCCCceEEe-cC---CcCCcccc-c---cCCCCCcchH-HHHHHHHHHHHhcCC
Confidence            9998653221  1222389999999998 999986 43   44322211 0   01112 4567 999999999999999


Q ss_pred             cEEEEecCcccCCCCC-------------CceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCC
Q 022495          219 NYTIIRPGGLRNEPPT-------------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       219 ~~~~lrp~~i~g~~~~-------------~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~  285 (296)
                      ++++|||+.++++...             +.+...........+++++|+|++++.++.++...++++++.+.  ++.++
T Consensus       151 ~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~--~~~~s  228 (313)
T 1qyd_A          151 PYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPP--MNILS  228 (313)
T ss_dssp             CBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCG--GGEEE
T ss_pred             CeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCC--CCccC
Confidence            9999999988763211             11111122223356899999999999999987666778887752  36799


Q ss_pred             HHHHHHHhhc
Q 022495          286 YEDLFGSIKQ  295 (296)
Q Consensus       286 ~~el~~~i~~  295 (296)
                      +.|+++.+++
T Consensus       229 ~~e~~~~~~~  238 (313)
T 1qyd_A          229 QKEVIQIWER  238 (313)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.95  E-value=7.9e-29  Score=218.20  Aligned_cols=222  Identities=21%  Similarity=0.212  Sum_probs=155.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh-----cccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      +|+||||||+||||++|+++|+++|++|+++.|++++...     .+. ...+++++.+|++| .+.+.+++++ +|+||
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d-~~~~~~~~~~-~D~Vi   85 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTD-ELSFEAPIAG-CDFVF   85 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTT-SSSSHHHHTT-CSEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCC-hHHHHHHHcC-CCEEE
Confidence            6899999999999999999999999999999998654221     111 12468899999999 7889999999 99999


Q ss_pred             EcCCCCCCC--CC---cchhHH---HHHHHHHHHcC-CCEEEEEcccee-ccCc-cC--ccCChhhh-------hhhhh-
Q 022495          141 CATGFQPGW--DL---FAPWKA---INLVEACRKRG-VNRFILISSILV-NGAA-MG--QILNPAYI-------FLNVF-  199 (296)
Q Consensus       141 ~~ag~~~~~--~~---~~~~~~---~~~l~~~~~~~-~~~iV~~SS~~~-~~~~-~~--~~~~~~~~-------~~~~~-  199 (296)
                      |+|+.....  +.   ....++   .+++++|++.+ +++|||+||.++ |+.. .+  .+.++...       +..+. 
T Consensus        86 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  165 (338)
T 2rh8_A           86 HVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPT  165 (338)
T ss_dssp             EESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCC
T ss_pred             EeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCcc
Confidence            999854211  11   111222   89999999986 899999999874 3321 11  12333221       11111 


Q ss_pred             HHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCcee---------ecccCccc------------cCCcCHHH
Q 022495          200 GLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNII---------METEDTLY------------EGTISRDQ  254 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~~---------~~~~~~~~------------~~~i~~~D  254 (296)
                      ..|+.+|.++|.+++    ++++++++|||+.+||+.......         .......+            ..+++++|
T Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~D  245 (338)
T 2rh8_A          166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVED  245 (338)
T ss_dssp             CCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHH
Confidence            159999999998764    369999999999999986433210         00100000            15899999


Q ss_pred             HHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          255 VAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       255 va~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +|++++.+++.+... ..|++.+    ..+++.|+++.+.+
T Consensus       246 va~a~~~~~~~~~~~-~~~~~~~----~~~s~~e~~~~l~~  281 (338)
T 2rh8_A          246 VCRAHIFVAEKESAS-GRYICCA----ANTSVPELAKFLSK  281 (338)
T ss_dssp             HHHHHHHHHHCTTCC-EEEEECS----EEECHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcC-CcEEEec----CCCCHHHHHHHHHH
Confidence            999999999775543 3676654    45899999998864

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.95  E-value=3.2e-28  Score=234.03  Aligned_cols=227  Identities=16%  Similarity=0.176  Sum_probs=164.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh----hcccCCCCCeEEEEcccCCChHHHHHHhc--CCC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK----TTLSKDNPSLQIVKADVTEGSAKLSEAIG--DDS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~~  136 (296)
                      .+++|+||||||+||||++++++|+++|++|++++|......    .+......++.++.+|++| .+.+.++++  + +
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~~-~   85 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD-RKGLEKVFKEYK-I   85 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC-HHHHHHHHHHSC-C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCC-HHHHHHHHHhCC-C
Confidence            456789999999999999999999999999999999764321    1100013578899999999 899999888  6 9


Q ss_pred             CEEEEcCCCCCCC----CCcchh--HH---HHHHHHHHHcCCCEEEEEccceeccCccC----ccCChhhhhhhhhHHHH
Q 022495          137 EAVVCATGFQPGW----DLFAPW--KA---INLVEACRKRGVNRFILISSILVNGAAMG----QILNPAYIFLNVFGLTL  203 (296)
Q Consensus       137 d~vv~~ag~~~~~----~~~~~~--~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~----~~~~~~~~~~~~~~~y~  203 (296)
                      |+||||||.....    ......  ++   .+++++|++.++++||++||.++|+....    .+..+ ..+..+.+.|+
T Consensus        86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E-~~~~~p~~~Y~  164 (699)
T 1z45_A           86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPE-ECPLGPTNPYG  164 (699)
T ss_dssp             CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCT-TSCCCCCSHHH
T ss_pred             CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccc-cCCCCCCChHH
Confidence            9999999965321    001111  11   88999999999999999999999986421    12222 22344567899


Q ss_pred             HHHHHHHHHHHH------hCCcEEEEecCcccCCCCCC-----------cee---------------ecc------cCcc
Q 022495          204 IAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTG-----------NII---------------MET------EDTL  245 (296)
Q Consensus       204 ~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~-----------~~~---------------~~~------~~~~  245 (296)
                      .+|+++|++++.      .+++++++||+.+||+...+           .+.               ..+      ....
T Consensus       165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  244 (699)
T 1z45_A          165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP  244 (699)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred             HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCe
Confidence            999999998864      58999999999999864211           100               000      1122


Q ss_pred             ccCCcCHHHHHHHHHHHhcCC------CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          246 YEGTISRDQVAEVAVEALLHP------ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       246 ~~~~i~~~Dva~~i~~~l~~~------~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ...+++++|+|++++.++..+      ...+++||+++   +..+++.|+++.+.+
T Consensus       245 ~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~---~~~~s~~el~~~i~~  297 (699)
T 1z45_A          245 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS---GKGSTVFEVYHAFCK  297 (699)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC---SCCEEHHHHHHHHHH
T ss_pred             eEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECC---CCCCcHHHHHHHHHH
Confidence            346899999999999988642      22346889887   688999999998865

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.95  E-value=3.3e-27  Score=209.15  Aligned_cols=206  Identities=17%  Similarity=0.184  Sum_probs=157.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh--hhcccCCCCCeEEEEcc-cCCChHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA--KTTLSKDNPSLQIVKAD-VTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~D-~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++|+|+|||||||||++++++|+++|++|++++|++++.  ..+.  ...+++++.+| ++| .+++.+++++ +|+|||
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~--~~~~v~~v~~D~l~d-~~~l~~~~~~-~d~Vi~   79 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ--AIPNVTLFQGPLLNN-VPLMDTLFEG-AHLAFI   79 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH--TSTTEEEEESCCTTC-HHHHHHHHTT-CSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh--hcCCcEEEECCccCC-HHHHHHHHhc-CCEEEE
Confidence            367999999999999999999999999999999988654  2222  22478999999 999 8999999999 999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcC-CCEEEEEccce--eccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCC
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRG-VNRFILISSIL--VNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGI  218 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~~SS~~--~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~  218 (296)
                      |++....   ......++++++|++.+ +++|||+||..  .|+.             .+...|+.+|.++|+++++.++
T Consensus        80 ~a~~~~~---~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-------------~~~~~y~~sK~~~E~~~~~~gi  143 (352)
T 1xgk_A           80 NTTSQAG---DEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-------------WPAVPMWAPKFTVENYVRQLGL  143 (352)
T ss_dssp             CCCSTTS---CHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-------------CCCCTTTHHHHHHHHHHHTSSS
T ss_pred             cCCCCCc---HHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC-------------CCCccHHHHHHHHHHHHHHcCC
Confidence            9875321   11222299999999999 99999999985  2321             1123478999999999999999


Q ss_pred             cEEEEecCcccCCCCCCc--------------eee--cccCccccCCcCH-HHHHHHHHHHhcCCC--CCCCeEEEEeCC
Q 022495          219 NYTIIRPGGLRNEPPTGN--------------IIM--ETEDTLYEGTISR-DQVAEVAVEALLHPE--SSYKVVEIISRV  279 (296)
Q Consensus       219 ~~~~lrp~~i~g~~~~~~--------------~~~--~~~~~~~~~~i~~-~Dva~~i~~~l~~~~--~~~~~~~i~~~~  279 (296)
                      ++++|||+. ||+.....              ...  .........++++ +|+|++++.++.++.  ..+++|++.+  
T Consensus       144 ~~~ivrpg~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~--  220 (352)
T 1xgk_A          144 PSTFVYAGI-YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF--  220 (352)
T ss_dssp             CEEEEEECE-EGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS--
T ss_pred             CEEEEecce-ecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec--
Confidence            999999984 55432221              100  1112233458998 999999999998752  2578999985  


Q ss_pred             CCCCCCHHHHHHHhhc
Q 022495          280 DAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       280 ~~~~~~~~el~~~i~~  295 (296)
                        ..+++.|+++.+.+
T Consensus       221 --~~~s~~e~~~~i~~  234 (352)
T 1xgk_A          221 --ETLSPVQVCAAFSR  234 (352)
T ss_dssp             --EEECHHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHH
Confidence              45999999999875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=5.4e-27  Score=201.00  Aligned_cols=218  Identities=13%  Similarity=0.082  Sum_probs=158.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhc------
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIG------  133 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~------  133 (296)
                      +++++|+|+||||+|+||++++++|+++|++|++++|+.+...+...  ....++.++.+|++| .+++.++++      
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKH   90 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999999999998765443221  112379999999999 888877765      


Q ss_pred             -CCCCEEEEcCCCCCCC----CCc--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          134 -DDSEAVVCATGFQPGW----DLF--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       134 -~~~d~vv~~ag~~~~~----~~~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                       + +|+||||||.....    ...  ..+..             +.+++.+++.+.++||++||..+|....        
T Consensus        91 ~~-id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  161 (278)
T 2bgk_A           91 GK-LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE--------  161 (278)
T ss_dssp             SC-CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--------
T ss_pred             CC-CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC--------
Confidence             5 99999999975321    111  11111             4445555556778999999998775421        


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceee---------cccCccccCCcCHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIM---------ETEDTLYEGTISRDQVAE  257 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~---------~~~~~~~~~~i~~~Dva~  257 (296)
                         .+...|+.+|++.+.+++.       .++++++||||+++|+........         .........+++++|+|+
T Consensus       162 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (278)
T 2bgk_A          162 ---GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVAD  238 (278)
T ss_dssp             ---TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHH
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHH
Confidence               1246799999999987752       589999999999999864332110         000111234789999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          258 VAVEALLHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +++.++..+.  ..|+.+++.+   +...++.|+++.+.+
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~g---g~~~~~~e~~~~i~~  275 (278)
T 2bgk_A          239 AVAYLAGDESKYVSGLNLVIDG---GYTRTNPAFPTALKH  275 (278)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST---TGGGCCTHHHHHSCS
T ss_pred             HHHHHcCcccccCCCCEEEECC---cccccCCccchhhhh
Confidence            9999886542  3577888876   788999999999875

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.95  E-value=1.8e-27  Score=206.05  Aligned_cols=206  Identities=14%  Similarity=0.092  Sum_probs=149.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |||||||||||||++|+++|+++|++|++++|++...         .   +..|     +...+.+.+ +|+|||+|+..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------~---~~~~-----~~~~~~l~~-~d~vihla~~~   62 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------R---ITWD-----ELAASGLPS-CDAAVNLAGEN   62 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------E---EEHH-----HHHHHCCCS-CSEEEECCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------e---eecc-----hhhHhhccC-CCEEEEeccCc
Confidence            6899999999999999999999999999999986431         1   1222     233455777 99999999843


Q ss_pred             CC-----CCCcchhH-----H---HHHHHHHHHcCC--CEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHH
Q 022495          147 PG-----WDLFAPWK-----A---INLVEACRKRGV--NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQ  211 (296)
Q Consensus       147 ~~-----~~~~~~~~-----~---~~~l~~~~~~~~--~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~  211 (296)
                      -.     +.......     .   ++++++++..+.  .++|++||.++|+.....+.+++. +..+...|+..+...|.
T Consensus        63 i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~-p~~~~~~~~~~~~~~e~  141 (298)
T 4b4o_A           63 ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDS-PGGDFDFFSNLVTKWEA  141 (298)
T ss_dssp             SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTC-CCSCSSHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccC-CccccchhHHHHHHHHH
Confidence            11     11111111     1   788898888764  468999999999987766665543 44445556666666554


Q ss_pred             HH--HHhCCcEEEEecCcccCCCCCC-----------ceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeC
Q 022495          212 YI--RKSGINYTIIRPGGLRNEPPTG-----------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISR  278 (296)
Q Consensus       212 ~~--~~~~~~~~~lrp~~i~g~~~~~-----------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~  278 (296)
                      ..  .+.+++++++||+.+||+....           .....+....+.+|+|++|+|+++..+++++...+ +||+++ 
T Consensus       142 ~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g-~yn~~~-  219 (298)
T 4b4o_A          142 AARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHG-VLNGVA-  219 (298)
T ss_dssp             HHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCE-EEEESC-
T ss_pred             HHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCC-eEEEEC-
Confidence            33  3578999999999999975311           11112334445679999999999999999887554 999998 


Q ss_pred             CCCCCCCHHHHHHHhhc
Q 022495          279 VDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       279 ~~~~~~~~~el~~~i~~  295 (296)
                        ++++|+.|+++.+++
T Consensus       220 --~~~~t~~e~~~~ia~  234 (298)
T 4b4o_A          220 --PSSATNAEFAQTFGA  234 (298)
T ss_dssp             --SCCCBHHHHHHHHHH
T ss_pred             --CCccCHHHHHHHHHH
Confidence              799999999999875

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.95  E-value=1.6e-27  Score=211.72  Aligned_cols=221  Identities=14%  Similarity=0.181  Sum_probs=159.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-----CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-C-CCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-----FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-D-SEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~-~d~  138 (296)
                      +|+||||||+||||++++++|+++|     ++|++++|++....  .  ...+++++.+|++| .+.+.+++++ + +|+
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~--~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~d~   75 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--H--EDNPINYVQCDISD-PDDSQAKLSPLTDVTH   75 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--C--CSSCCEEEECCTTS-HHHHHHHHTTCTTCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--c--ccCceEEEEeecCC-HHHHHHHHhcCCCCCE
Confidence            3689999999999999999999999     99999999876543  1  23578999999999 8999998876 3 899


Q ss_pred             EEEcCCCCCCCCCcchh--HH---HHHHHHHHHc--CCCEEE-------EEccceeccCcc--CccCChhhhhhhhhHHH
Q 022495          139 VVCATGFQPGWDLFAPW--KA---INLVEACRKR--GVNRFI-------LISSILVNGAAM--GQILNPAYIFLNVFGLT  202 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~--~~---~~~l~~~~~~--~~~~iV-------~~SS~~~~~~~~--~~~~~~~~~~~~~~~~y  202 (296)
                      ||||||.... +.....  +.   .+++++|++.  ++++||       |+||.++||...  ..+.++......+.+.|
T Consensus        76 vih~a~~~~~-~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y  154 (364)
T 2v6g_A           76 VFYVTWANRS-TEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY  154 (364)
T ss_dssp             EEECCCCCCS-SHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred             EEECCCCCcc-hHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh
Confidence            9999996532 111111  11   8999999998  788998       799999998742  22333432211123456


Q ss_pred             HHHHHHHHHHHHHhC-CcEEEEecCcccCCCCCC--c------ee--e---cccC-c---------cccCCcCHHHHHHH
Q 022495          203 LIAKLQAEQYIRKSG-INYTIIRPGGLRNEPPTG--N------II--M---ETED-T---------LYEGTISRDQVAEV  258 (296)
Q Consensus       203 ~~sK~~~e~~~~~~~-~~~~~lrp~~i~g~~~~~--~------~~--~---~~~~-~---------~~~~~i~~~Dva~~  258 (296)
                      ...+..++.+.++.+ ++++++||+.+||+....  .      +.  .   .... .         .+..+++++|+|++
T Consensus       155 ~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a  234 (364)
T 2v6g_A          155 YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEH  234 (364)
T ss_dssp             HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHH
Confidence            444444444444456 999999999999976432  1      00  0   0100 1         11345667999999


Q ss_pred             HHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          259 AVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       259 i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++.++..+...+++||+++   +..+++.|+++.+.+
T Consensus       235 ~~~~~~~~~~~g~~~ni~~---~~~~s~~e~~~~i~~  268 (364)
T 2v6g_A          235 HIWAAVDPYAKNEAFNVSN---GDVFKWKHFWKVLAE  268 (364)
T ss_dssp             HHHHHHCGGGTTEEEEECC---SCCBCHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCceEEecC---CCcCCHHHHHHHHHH
Confidence            9999988765678999998   678999999998865

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.95  E-value=1.1e-27  Score=209.56  Aligned_cols=210  Identities=17%  Similarity=0.176  Sum_probs=156.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-c-----hhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-D-----KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~-----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      +|+|+||||||+||++++++|+++|++|++++|++ +     +...+......+++++.+|++| .+++.+++++ +|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d-~~~l~~a~~~-~d~v   81 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEE-HEKMVSVLKQ-VDIV   81 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTC-HHHHHHHHTT-CSEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCC-HHHHHHHHcC-CCEE
Confidence            57899999999999999999999999999999986 2     2111100012579999999999 8999999999 9999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh-hHHHHHHHHHHHHHHHHhC
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV-FGLTLIAKLQAEQYIRKSG  217 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~-~~~y~~sK~~~e~~~~~~~  217 (296)
                      |||++...      ....++++++|++.| +++||+ |   +||....    +. .+..+ ...| .+|..+|+++++.+
T Consensus        82 i~~a~~~~------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~----~~-~~~~p~~~~y-~sK~~~e~~~~~~~  145 (321)
T 3c1o_A           82 ISALPFPM------ISSQIHIINAIKAAGNIKRFLP-S---DFGCEED----RI-KPLPPFESVL-EKKRIIRRAIEAAA  145 (321)
T ss_dssp             EECCCGGG------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSCGG----GC-CCCHHHHHHH-HHHHHHHHHHHHHT
T ss_pred             EECCCccc------hhhHHHHHHHHHHhCCccEEec-c---ccccCcc----cc-ccCCCcchHH-HHHHHHHHHHHHcC
Confidence            99998532      122289999999998 999983 3   2443211    11 11122 5678 99999999999999


Q ss_pred             CcEEEEecCcccCCC------------CCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCC
Q 022495          218 INYTIIRPGGLRNEP------------PTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       218 ~~~~~lrp~~i~g~~------------~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~  285 (296)
                      +++++|||+.++++.            ..+.+...........+++++|+|++++.++.++...++++++.+.  ++.++
T Consensus       146 ~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~--~~~~t  223 (321)
T 3c1o_A          146 LPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPP--KNIIS  223 (321)
T ss_dssp             CCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCG--GGEEE
T ss_pred             CCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCC--CCccc
Confidence            999999999887632            1112222222333456899999999999999887666777887652  37899


Q ss_pred             HHHHHHHhhc
Q 022495          286 YEDLFGSIKQ  295 (296)
Q Consensus       286 ~~el~~~i~~  295 (296)
                      +.|+++.+++
T Consensus       224 ~~e~~~~~~~  233 (321)
T 3c1o_A          224 QNELISLWEA  233 (321)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.95  E-value=5.5e-27  Score=201.42  Aligned_cols=212  Identities=18%  Similarity=0.146  Sum_probs=152.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      +++|+++||||+||||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.      ++|
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTD-GERIDVVAADVLARYGRVD   81 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCS
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCC-HHHHHHHHHHHHHhCCCCC
Confidence            457999999999999999999999999999999999887665543344689999999999 8887776652      399


Q ss_pred             EEEEcCCCCCCCC----CcchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          138 AVVCATGFQPGWD----LFAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       138 ~vv~~ag~~~~~~----~~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      +||||||......    ....+.    .         +.+++.+++.+.++||++||...+..            ..+..
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~~~  149 (281)
T 3m1a_A           82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS------------FAGFS  149 (281)
T ss_dssp             EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC------------CTTCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC------------CCCch
Confidence            9999999643211    111111    1         77888888888889999999876532            22356


Q ss_pred             HHHHHHHHHHHHHH----H---hCCcEEEEecCcccCCCCCCceee-ccc----------------CccccCCcCHHHHH
Q 022495          201 LTLIAKLQAEQYIR----K---SGINYTIIRPGGLRNEPPTGNIIM-ETE----------------DTLYEGTISRDQVA  256 (296)
Q Consensus       201 ~y~~sK~~~e~~~~----~---~~~~~~~lrp~~i~g~~~~~~~~~-~~~----------------~~~~~~~i~~~Dva  256 (296)
                      .|+.+|++++.+.+    +   +|+++++|+||.+.++........ ...                ......+.+++|+|
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  229 (281)
T 3m1a_A          150 AYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAA  229 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHH
Confidence            79999999998764    2   689999999999988754321110 000                01112378899999


Q ss_pred             HHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHH
Q 022495          257 EVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGS  292 (296)
Q Consensus       257 ~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~  292 (296)
                      ++++.++..+.. +..|++++   +....+.+....
T Consensus       230 ~a~~~~~~~~~~-~~~~~l~s---~~~~~i~g~~~~  261 (281)
T 3m1a_A          230 AAIRLALDTEKT-PLRLALGG---DAVDFLTGHLDS  261 (281)
T ss_dssp             HHHHHHHHSSSC-CSEEEESH---HHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCC-CeEEecCc---hHHHHHHHHHHH
Confidence            999999988764 56888877   343444444433

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.95  E-value=1.7e-28  Score=202.26  Aligned_cols=186  Identities=18%  Similarity=0.146  Sum_probs=145.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++.+       ...+++++.+|++| .+.+.+++   +|+||||
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------~~~~~~~~~~D~~~-~~~~~~~~---~d~vi~~   72 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLDNPVGPLAE-LLPQLDGS---IDTAFCC   72 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEECCBSCHHH-HGGGCCSC---CSEEEEC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------cCCCceEEeccccC-HHHHHHhh---hcEEEEC
Confidence            468999999999999999999999998  99999998765       13578899999999 77777766   7999999


Q ss_pred             CCCCCCC--CCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 022495          143 TGFQPGW--DLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK  215 (296)
Q Consensus       143 ag~~~~~--~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  215 (296)
                      ||.....  +......     ..++++++++.++++||++||..+|+.              +...|+.+|.++|+++++
T Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~--------------~~~~y~~sK~~~e~~~~~  138 (215)
T 2a35_A           73 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK--------------SSIFYNRVKGELEQALQE  138 (215)
T ss_dssp             CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------------CSSHHHHHHHHHHHHHTT
T ss_pred             eeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC--------------CccHHHHHHHHHHHHHHH
Confidence            9965321  1111111     188999999999999999999988753              134699999999999999


Q ss_pred             hCCc-EEEEecCcccCCCCCCceeec---ccC---ccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          216 SGIN-YTIIRPGGLRNEPPTGNIIME---TED---TLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       216 ~~~~-~~~lrp~~i~g~~~~~~~~~~---~~~---~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      .+++ ++++||+.++|+.....+...   ...   .....+++++|+|++++.++.++.  +.+|++.+
T Consensus       139 ~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~  205 (215)
T 2a35_A          139 QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG--KGVRFVES  205 (215)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEH
T ss_pred             cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC--CCceEEcH
Confidence            9999 999999999998643211100   000   012357999999999999998875  66899887

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.95  E-value=8.7e-28  Score=208.80  Aligned_cols=210  Identities=19%  Similarity=0.259  Sum_probs=155.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh------hhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA------KTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      +|+|+||||||+||++++++|+++|++|++++|+....      ..+......+++++.+|++| .+++.+++++ +|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-~~~l~~~~~~-~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD-HASLVEAVKN-VDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTC-HHHHHHHHHT-CSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCC-HHHHHHHHcC-CCEE
Confidence            57899999999999999999999999999999985422      11100013579999999999 8999999999 9999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh-hHHHHHHHHHHHHHHHHhC
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV-FGLTLIAKLQAEQYIRKSG  217 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~-~~~y~~sK~~~e~~~~~~~  217 (296)
                      ||+++...      ....++++++|++.+ +++||+ |+   ||....    +. .+..+ ...| .+|..+|+++++.+
T Consensus        82 i~~a~~~~------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~----~~-~~~~p~~~~y-~sK~~~e~~~~~~~  145 (308)
T 1qyc_A           82 ISTVGSLQ------IESQVNIIKAIKEVGTVKRFFP-SE---FGNDVD----NV-HAVEPAKSVF-EVKAKVRRAIEAEG  145 (308)
T ss_dssp             EECCCGGG------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSCTT----SC-CCCTTHHHHH-HHHHHHHHHHHHHT
T ss_pred             EECCcchh------hhhHHHHHHHHHhcCCCceEee-cc---cccCcc----cc-ccCCcchhHH-HHHHHHHHHHHhcC
Confidence            99998532      112289999999998 999984 43   342211    10 11122 3567 99999999999999


Q ss_pred             CcEEEEecCcccCCCCC------------CceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCC
Q 022495          218 INYTIIRPGGLRNEPPT------------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       218 ~~~~~lrp~~i~g~~~~------------~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~  285 (296)
                      ++++++||+.+++....            +.+...........+++++|+|++++.++.++...++++++.+.  ++.+|
T Consensus       146 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~--~~~~s  223 (308)
T 1qyc_A          146 IPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLP--ANTLS  223 (308)
T ss_dssp             CCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCG--GGEEE
T ss_pred             CCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCC--CCccC
Confidence            99999999988763211            11112222233456899999999999999887666777887652  36799


Q ss_pred             HHHHHHHhhc
Q 022495          286 YEDLFGSIKQ  295 (296)
Q Consensus       286 ~~el~~~i~~  295 (296)
                      +.|+++.+++
T Consensus       224 ~~e~~~~~~~  233 (308)
T 1qyc_A          224 LNELVALWEK  233 (308)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.95  E-value=1.1e-27  Score=213.57  Aligned_cols=186  Identities=18%  Similarity=0.103  Sum_probs=148.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      |+||||||+||||++++++|+++|+ +|++++|+                      .| .+.+.+++++ +|+|||+||.
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------~d-~~~l~~~~~~-~d~Vih~a~~   56 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------TK-EEELESALLK-ADFIVHLAGV   56 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------CC-HHHHHHHHHH-CSEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------CC-HHHHHHHhcc-CCEEEECCcC
Confidence            5899999999999999999999998 77776554                      66 7889999998 9999999997


Q ss_pred             CCCCCCcch-----hHHHHHHHHHHHcCCC-EEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH----
Q 022495          146 QPGWDLFAP-----WKAINLVEACRKRGVN-RFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK----  215 (296)
Q Consensus       146 ~~~~~~~~~-----~~~~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~----  215 (296)
                      ....+....     ....++++++++.+++ +|||+||..+|+                .+.|+.+|.++|+++++    
T Consensus        57 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------------~~~Y~~sK~~~E~~~~~~~~~  120 (369)
T 3st7_A           57 NRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----------------DNPYGESKLQGEQLLREYAEE  120 (369)
T ss_dssp             BCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------------CSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----------------CCCchHHHHHHHHHHHHHHHH
Confidence            543322211     1229999999999987 999999998876                24599999999998865    


Q ss_pred             hCCcEEEEecCcccCCCCCCc---e-------------eecccCccccCCcCHHHHHHHHHHHhcCCCCC-CCeEEEEeC
Q 022495          216 SGINYTIIRPGGLRNEPPTGN---I-------------IMETEDTLYEGTISRDQVAEVAVEALLHPESS-YKVVEIISR  278 (296)
Q Consensus       216 ~~~~~~~lrp~~i~g~~~~~~---~-------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~-~~~~~i~~~  278 (296)
                      .+++++++||+++||+.....   +             ...........+++++|+|++++.++..+... +++|++.+ 
T Consensus       121 ~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~-  199 (369)
T 3st7_A          121 YGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPN-  199 (369)
T ss_dssp             HCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSC-
T ss_pred             hCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCC-
Confidence            799999999999999854321   1             01111233346899999999999999987653 67999987 


Q ss_pred             CCCCCCCHHHHHHHhhc
Q 022495          279 VDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       279 ~~~~~~~~~el~~~i~~  295 (296)
                        +..+++.|+++.+.+
T Consensus       200 --~~~~s~~e~~~~~~~  214 (369)
T 3st7_A          200 --VFKVTLGEIVDLLYK  214 (369)
T ss_dssp             --CEEEEHHHHHHHHHH
T ss_pred             --CCceeHHHHHHHHHH
Confidence              689999999999875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=2.4e-27  Score=207.09  Aligned_cols=210  Identities=20%  Similarity=0.211  Sum_probs=156.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-hhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      +++|+||||||+||++++++|+++|++|++++|+++ +...+......+++++.+|++| .+++.+++++ +|+|||+++
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d-~~~l~~a~~~-~d~vi~~a~   88 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDE-HEKLVELMKK-VDVVISALA   88 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTC-HHHHHHHHTT-CSEEEECCC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCC-HHHHHHHHcC-CCEEEECCc
Confidence            468999999999999999999999999999999875 2211100012578999999999 8999999999 999999998


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh-hHHHHHHHHHHHHHHHHhCCcEEE
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV-FGLTLIAKLQAEQYIRKSGINYTI  222 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~-~~~y~~sK~~~e~~~~~~~~~~~~  222 (296)
                      ...      ....++++++|++.+ +++||+ |+   ||....    +. .+..+ ...| .+|..+|+++++.++++++
T Consensus        89 ~~~------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~----~~-~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~  152 (318)
T 2r6j_A           89 FPQ------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEED----RI-NALPPFEALI-ERKRMIRRAIEEANIPYTY  152 (318)
T ss_dssp             GGG------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCTT----TC-CCCHHHHHHH-HHHHHHHHHHHHTTCCBEE
T ss_pred             hhh------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCcc----cc-cCCCCcchhH-HHHHHHHHHHHhcCCCeEE
Confidence            532      112389999999998 999985 43   443211    11 11122 4567 9999999999999999999


Q ss_pred             EecCcccCCC---------CCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHh
Q 022495          223 IRPGGLRNEP---------PTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSI  293 (296)
Q Consensus       223 lrp~~i~g~~---------~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i  293 (296)
                      |||+.+++..         ..+.+...........+++++|+|++++.++.++...++++++.+.  ++.+++.|+++.+
T Consensus       153 lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~--~~~~s~~e~~~~~  230 (318)
T 2r6j_A          153 VSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPS--TNIITQLELISRW  230 (318)
T ss_dssp             EECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCG--GGEEEHHHHHHHH
T ss_pred             EEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCC--CCccCHHHHHHHH
Confidence            9999877631         1122222223334456899999999999999887656677777642  4689999999988


Q ss_pred             hc
Q 022495          294 KQ  295 (296)
Q Consensus       294 ~~  295 (296)
                      ++
T Consensus       231 ~~  232 (318)
T 2r6j_A          231 EK  232 (318)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1e-26  Score=199.36  Aligned_cols=214  Identities=18%  Similarity=0.125  Sum_probs=143.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc------cCCCCCeEEEEcccCCChHHHHHHhc----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL------SKDNPSLQIVKADVTEGSAKLSEAIG----  133 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~~----  133 (296)
                      +++|+++||||+|+||+++++.|+++|++|++++|++++..+..      .....++.++.+|++| .+++.++++    
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~   82 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG   82 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC-HHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999977654321      1123468999999999 888777765    


Q ss_pred             ---CCCCEEEEcCCCCCCCC--------CcchhHH-------------HHHHHHHHHcCCCEEEEEcccee-ccCccCcc
Q 022495          134 ---DDSEAVVCATGFQPGWD--------LFAPWKA-------------INLVEACRKRGVNRFILISSILV-NGAAMGQI  188 (296)
Q Consensus       134 ---~~~d~vv~~ag~~~~~~--------~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~-~~~~~~~~  188 (296)
                         + +|+||||||......        ....+..             +.+++.+++.+ ++||++||... +...    
T Consensus        83 ~~g~-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~----  156 (278)
T 1spx_A           83 KFGK-LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT----  156 (278)
T ss_dssp             HHSC-CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC----
T ss_pred             HcCC-CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC----
Confidence               5 999999999653211        1111111             55666666666 89999999875 4321    


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecc-c-------C-----ccccC
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMET-E-------D-----TLYEG  248 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~-~-------~-----~~~~~  248 (296)
                              .+...|+.+|++.+.+.+.       .|+++++|+||.+.++.......... .       .     .....
T Consensus       157 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  228 (278)
T 1spx_A          157 --------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGV  228 (278)
T ss_dssp             --------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSS
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcC
Confidence                    2246799999999987652       58999999999999875432110000 0       0     01134


Q ss_pred             CcCHHHHHHHHHHHhcCCC---CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          249 TISRDQVAEVAVEALLHPE---SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       249 ~i~~~Dva~~i~~~l~~~~---~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.+++|+|++++.++..+.   ..|+++++.+   +...++.|+++.+.+
T Consensus       229 ~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdg---G~~~~~~~~~~~~~~  275 (278)
T 1spx_A          229 MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG---GSSLIMGLHCQDFAK  275 (278)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST---TGGGC----------
T ss_pred             CCCHHHHHHHHHHHcCccccCcccCcEEEECC---CcccccCcccccHHH
Confidence            7899999999998887543   3477777766   688999999988865

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.95  E-value=6.1e-27  Score=217.47  Aligned_cols=209  Identities=16%  Similarity=0.097  Sum_probs=154.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +|+||||||+||||++|++.|+++|++|++++|++.+.           ..+.+|+.| .  +.+++.+ +|+||||||.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------~~v~~d~~~-~--~~~~l~~-~D~Vih~A~~  211 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------GKRFWDPLN-P--ASDLLDG-ADVLVHLAGE  211 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------TCEECCTTS-C--CTTTTTT-CSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------cceeecccc-h--hHHhcCC-CCEEEECCCC
Confidence            78999999999999999999999999999999987642           126678876 3  3566777 9999999996


Q ss_pred             CCC--CCCcchh-----H---HHHHHHH-HHHcCCCEEEEEccceecc-CccCccCChhhhhhhhhHHHHHHHHHHHHHH
Q 022495          146 QPG--WDLFAPW-----K---AINLVEA-CRKRGVNRFILISSILVNG-AAMGQILNPAYIFLNVFGLTLIAKLQAEQYI  213 (296)
Q Consensus       146 ~~~--~~~~~~~-----~---~~~~l~~-~~~~~~~~iV~~SS~~~~~-~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~  213 (296)
                      ...  +......     +   ..+++++ +++.++++|||+||.++|+ .....+.++....  +.+.|+.+|...|.++
T Consensus       212 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~--~~~~y~~~~~~~E~~~  289 (516)
T 3oh8_A          212 PIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES--GDDFLAEVCRDWEHAT  289 (516)
T ss_dssp             -----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC--CSSHHHHHHHHHHHTT
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC--CcChHHHHHHHHHHHH
Confidence            432  1111111     1   1899998 6667789999999999998 4433344444322  4567888888888654


Q ss_pred             ---HHhCCcEEEEecCcccCCCCC-----------CceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCC
Q 022495          214 ---RKSGINYTIIRPGGLRNEPPT-----------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRV  279 (296)
Q Consensus       214 ---~~~~~~~~~lrp~~i~g~~~~-----------~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~  279 (296)
                         ++.|+++++||||.+||+...           +.............+++++|+|++++.++.++... .+||+++  
T Consensus       290 ~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~-g~~ni~~--  366 (516)
T 3oh8_A          290 APASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQIS-GPINAVA--  366 (516)
T ss_dssp             HHHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCC-EEEEESC--
T ss_pred             HHHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccC-CcEEEEC--
Confidence               467999999999999997521           00011122233457899999999999999987644 4899988  


Q ss_pred             CCCCCCHHHHHHHhhc
Q 022495          280 DAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       280 ~~~~~~~~el~~~i~~  295 (296)
                       +..+++.|+++.+.+
T Consensus       367 -~~~~s~~el~~~i~~  381 (516)
T 3oh8_A          367 -PNPVSNADMTKILAT  381 (516)
T ss_dssp             -SCCEEHHHHHHHTTC
T ss_pred             -CCCCCHHHHHHHHHH
Confidence             689999999999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.94  E-value=2.1e-26  Score=195.45  Aligned_cols=202  Identities=15%  Similarity=0.174  Sum_probs=144.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.      ++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTR-QDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHSSSC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC-HHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999999999877665433234578999999999 8887776651      39


Q ss_pred             CEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |+||||||.......    .+.+..             +.+++.+++.+ .++||++||...+...            ..
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~  151 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE------------AL  151 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------TT
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC------------CC
Confidence            999999997543221    111111             55556665554 5699999999765422            22


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc--------------ee-ecccCccccCCcCHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN--------------II-METEDTLYEGTISRDQVA  256 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~--------------~~-~~~~~~~~~~~i~~~Dva  256 (296)
                      ...|+.+|++.+.+.+       ..++++++|+||.++++.....              .. ..........+.+++|+|
T Consensus       152 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva  231 (259)
T 4e6p_A          152 VAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLT  231 (259)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHH
Confidence            5679999999998775       2489999999999999753211              00 000011123478999999


Q ss_pred             HHHHHHhcCCC--CCCCeEEEEe
Q 022495          257 EVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       257 ~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++++.++....  ..|+++++.+
T Consensus       232 ~~v~~L~s~~~~~itG~~i~vdg  254 (259)
T 4e6p_A          232 GMAIFLASAESDYIVSQTYNVDG  254 (259)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCCccCCCCCCEEEECc
Confidence            99888776432  3467777766

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.94  E-value=3.3e-26  Score=192.26  Aligned_cols=202  Identities=18%  Similarity=0.147  Sum_probs=145.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++|++|+++||||+++||+++|+.|+++|++|++.+|+++++++..   .....++.++++|++| .++++++++.    
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK-KKDVEEFVRRTFET   81 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999987765432   2245789999999999 7777665542    


Q ss_pred             --CCCEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|++|||||+......     .+.++.             +.+++.|++.+.++||++||+..+...          
T Consensus        82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~----------  151 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG----------  151 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS----------
T ss_pred             cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC----------
Confidence              59999999997543211     112221             889999998888899999999754322          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeeccc--------CccccCCcCHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE--------DTLYEGTISRDQVAEVA  259 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~--------~~~~~~~i~~~Dva~~i  259 (296)
                        .....|+++|+++..+.+       .+||+++.|.||.+.++...........        ......+..++|+|.++
T Consensus       152 --~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v  229 (254)
T 4fn4_A          152 --FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVI  229 (254)
T ss_dssp             --SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHH
T ss_pred             --CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence              124569999999987765       4699999999999998754332211100        00112356899999998


Q ss_pred             HHHhcCCC--CCCCeEEEE
Q 022495          260 VEALLHPE--SSYKVVEII  276 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~  276 (296)
                      +.++.+..  ..|+++.+-
T Consensus       230 ~fLaSd~a~~iTG~~i~VD  248 (254)
T 4fn4_A          230 VFLASDEASFVNGDAVVVD  248 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCchhcCCcCCEEEeC
Confidence            87775432  234444443

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.94  E-value=6.3e-26  Score=192.60  Aligned_cols=206  Identities=13%  Similarity=0.030  Sum_probs=143.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|+.++..+.+.  ..++.++.+|++| .+++.++++.      +
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~   99 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR--QAGAVALYGDFSC-ETGIMAFIDLLKTQTSS   99 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH--HHTCEEEECCTTS-HHHHHHHHHHHHHHCSC
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--hcCCeEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence            46778999999999999999999999999999999999876544332  1348899999999 8877776642      4


Q ss_pred             CCEEEEcCCCCCCCCCcchhH---H-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDLFAPWK---A-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~~~~~---~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      +|+||||||............   .             +.+++.+++.+.++||++||...+...            .+.
T Consensus       100 iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~  167 (260)
T 3gem_A          100 LRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS------------SKH  167 (260)
T ss_dssp             CSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC------------SSC
T ss_pred             CCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC------------CCc
Confidence            999999999754322111111   1             666677777777899999998765432            235


Q ss_pred             HHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCceeecc--cCccccCCcCHHHHHHHHHHHhcCCCCCCC
Q 022495          200 GLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIMET--EDTLYEGTISRDQVAEVAVEALLHPESSYK  271 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~~~--~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~  271 (296)
                      ..|+.+|++.+.+.+.      .++++++|+||.+.++..........  .......+.+++|+|++++.++......|+
T Consensus       168 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~~~~itG~  247 (260)
T 3gem_A          168 IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLDSTYVTGT  247 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHHCSSCCSC
T ss_pred             HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhCCCCCCC
Confidence            6799999999987652      25999999999998865322111110  011112356799999999999976666788


Q ss_pred             eEEEEeCCCCCCCC
Q 022495          272 VVEIISRVDAPKRS  285 (296)
Q Consensus       272 ~~~i~~~~~~~~~~  285 (296)
                      ++++.+   |..++
T Consensus       248 ~i~vdG---G~~~~  258 (260)
T 3gem_A          248 TLTVNG---GRHVK  258 (260)
T ss_dssp             EEEEST---TTTTC
T ss_pred             EEEECC---CcccC
Confidence            888866   55543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.94  E-value=4.1e-26  Score=192.99  Aligned_cols=208  Identities=16%  Similarity=0.158  Sum_probs=148.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhc-----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      +++++|+|+||||+|+||++++++|+++|++|++++|++++..+..   .....++.++.+|++| .+.+.++++     
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISK   85 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999999999976554322   1124578999999999 888887765     


Q ss_pred             --CCCCEEEEcCCCCCCCCC---cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          134 --DDSEAVVCATGFQPGWDL---FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       134 --~~~d~vv~~ag~~~~~~~---~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        + +|+||||||.......   ...+..             +.+++.+++.+.++||++||..++...           
T Consensus        86 ~~~-~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------  153 (255)
T 1fmc_A           86 LGK-VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----------  153 (255)
T ss_dssp             HSS-CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------
T ss_pred             cCC-CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------
Confidence              5 9999999997543211   111110             445555566677899999999776432           


Q ss_pred             hhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceee---c--ccCccccCCcCHHHHHHHHHHHh
Q 022495          196 LNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIM---E--TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~---~--~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                       .+...|+.+|++.+.+++.       .++++++++||.++++........   .  ........+.+++|+|++++.++
T Consensus       154 -~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  232 (255)
T 1fmc_A          154 -INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHH
T ss_pred             -CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHh
Confidence             2356799999999987652       489999999999998642211100   0  00111234789999999999988


Q ss_pred             cCCC--CCCCeEEEEeCCCCCCCCH
Q 022495          264 LHPE--SSYKVVEIISRVDAPKRSY  286 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~~~~~~~~~~  286 (296)
                      ..+.  ..++++++.+   +..+++
T Consensus       233 ~~~~~~~~G~~~~v~g---g~~~s~  254 (255)
T 1fmc_A          233 SPAASWVSGQILTVSG---GGVQEL  254 (255)
T ss_dssp             SGGGTTCCSCEEEEST---TSCCCC
T ss_pred             CCccccCCCcEEEECC---ceeccC
Confidence            7543  3467888876   565554

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.94  E-value=2.2e-26  Score=195.79  Aligned_cols=206  Identities=16%  Similarity=0.143  Sum_probs=147.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC---C-CCCeEEEEcccCCChHHHHHHhc-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---D-NPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~-~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++..+....   . ..++.++.+|++| .+++.++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT-PEGVDAVVESVRSS   82 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999997765432210   1 3578999999999 887777665     


Q ss_pred             --CCCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          134 --DDSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       134 --~~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        + +|+||||||......    ....+..             +.+++.+++.+.++||++||..++...          
T Consensus        83 ~g~-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  151 (263)
T 3ai3_A           83 FGG-ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL----------  151 (263)
T ss_dssp             HSS-CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             cCC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC----------
Confidence              5 999999999754221    1111111             666677777777899999999876532          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---------ecc------cC-ccccCCcC
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---------MET------ED-TLYEGTIS  251 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---------~~~------~~-~~~~~~i~  251 (296)
                        .+...|+.+|++.+.+.+       .+|+++++|+||+++++.......         ...      .. .....+.+
T Consensus       152 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  229 (263)
T 3ai3_A          152 --WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFAS  229 (263)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBC
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcC
Confidence              124679999999998765       258999999999999864221100         000      00 11234789


Q ss_pred             HHHHHHHHHHHhcCCC--CCCCeEEEEeCCCCCCCC
Q 022495          252 RDQVAEVAVEALLHPE--SSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~~--~~~~~~~i~~~~~~~~~~  285 (296)
                      ++|+|++++.++..+.  ..++++++.+   |...+
T Consensus       230 ~~dvA~~~~~l~s~~~~~~~G~~~~vdg---G~~~s  262 (263)
T 3ai3_A          230 PEELANFFVFLCSERATYSVGSAYFVDG---GMLKT  262 (263)
T ss_dssp             HHHHHHHHHHHTSTTCTTCCSCEEEEST---TCCCC
T ss_pred             HHHHHHHHHHHcCccccCCCCcEEEECC---Ccccc
Confidence            9999999998887543  3467777765   45443

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.94  E-value=8.1e-26  Score=191.98  Aligned_cols=199  Identities=19%  Similarity=0.180  Sum_probs=145.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc-------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DD  135 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~~  135 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+........+.++.+|++| .+++.++++       + 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~-   81 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGG-   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSC-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCC-HHHHHHHHHHHHHHcCC-
Confidence            3568999999999999999999999999999999999876554322112358899999999 888877776       5 


Q ss_pred             CCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||......    ....+..             +.+++.+++.+.++||++||..++...            .+
T Consensus        82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~  149 (260)
T 1nff_A           82 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT------------VA  149 (260)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC------------CC
Confidence            999999999754221    1111111             677888888777899999999765432            12


Q ss_pred             hHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeeccc-CccccCCcCHHHHHHHHHHHhcCCC--C
Q 022495          199 FGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMETE-DTLYEGTISRDQVAEVAVEALLHPE--S  268 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~~-~~~~~~~i~~~Dva~~i~~~l~~~~--~  268 (296)
                      ...|+.+|++.+.+.+.       .|+++++|+||.++++...  ...... ......+.+++|+|++++.++..+.  .
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~  227 (260)
T 1nff_A          150 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYS  227 (260)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cchhhHHhCccCCCCCHHHHHHHHHHHhCccccCC
Confidence            46799999999987652       5899999999999987532  000000 1111346889999999999886533  3


Q ss_pred             CCCeEEEEe
Q 022495          269 SYKVVEIIS  277 (296)
Q Consensus       269 ~~~~~~i~~  277 (296)
                      .++++++.+
T Consensus       228 ~G~~~~v~g  236 (260)
T 1nff_A          228 TGAEFVVDG  236 (260)
T ss_dssp             CSCEEEEST
T ss_pred             cCCEEEECC
Confidence            467777765

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.94  E-value=9.7e-26  Score=191.48  Aligned_cols=199  Identities=14%  Similarity=0.186  Sum_probs=146.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|+.+...      ..++.++.+|++| .+++.++++.      +
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~   96 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA------DPDIHTVAGDISK-PETADRIVREGIERFGR   96 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS------STTEEEEESCTTS-HHHHHHHHHHHHHHHSC
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------cCceEEEEccCCC-HHHHHHHHHHHHHHCCC
Confidence            4567899999999999999999999999999999999876532      2478999999999 8887776651      3


Q ss_pred             CCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||+.......    +.+..             +.+++.+++.+.++||++||..++....          ..+
T Consensus        97 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~  166 (260)
T 3un1_A           97 IDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMV----------GMP  166 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBT----------TCC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCC----------CCc
Confidence            99999999975432211    11111             5566666788888999999987653221          123


Q ss_pred             hHHHHHHHHHHHHHHH----H---hCCcEEEEecCcccCCCCCCceeec-ccCccccCCcCHHHHHHHHHHHhcCCCCCC
Q 022495          199 FGLTLIAKLQAEQYIR----K---SGINYTIIRPGGLRNEPPTGNIIME-TEDTLYEGTISRDQVAEVAVEALLHPESSY  270 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~----~---~~~~~~~lrp~~i~g~~~~~~~~~~-~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~  270 (296)
                      ...|+.+|++.+.+.+    +   .|+++++|+||.++++......... ........+.+++|+|++++.+.......|
T Consensus       167 ~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L~~~~~itG  246 (260)
T 3un1_A          167 SALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYLEHAGFITG  246 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHhcccCCCCC
Confidence            4679999999998775    2   4899999999999998644322110 111122347789999999998865555677


Q ss_pred             CeEEEEe
Q 022495          271 KVVEIIS  277 (296)
Q Consensus       271 ~~~~i~~  277 (296)
                      +++++.+
T Consensus       247 ~~i~vdG  253 (260)
T 3un1_A          247 EILHVDG  253 (260)
T ss_dssp             CEEEEST
T ss_pred             cEEEECC
Confidence            8888865

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.94  E-value=2.5e-25  Score=188.63  Aligned_cols=203  Identities=15%  Similarity=0.119  Sum_probs=138.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.+...+.......++.++.+|++| .+++.++++.      +
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~   81 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTN-EADATAALAFAKQEFGH   81 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999999877665443334578999999999 8877776651      3


Q ss_pred             CCEEEEcCCCCCCCCCc--------chhHH-------------HHHHHHHHHc------CCCEEEEEccceeccCccCcc
Q 022495          136 SEAVVCATGFQPGWDLF--------APWKA-------------INLVEACRKR------GVNRFILISSILVNGAAMGQI  188 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~--------~~~~~-------------~~~l~~~~~~------~~~~iV~~SS~~~~~~~~~~~  188 (296)
                      +|+||||||........        +.+..             +.+++.+++.      +.++||++||...+...    
T Consensus        82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~----  157 (257)
T 3tpc_A           82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ----  157 (257)
T ss_dssp             CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC----
T ss_pred             CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC----
Confidence            99999999976432211        11111             4555555553      45799999998765322    


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-----ecccCccccCCcCHHHHH
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQVA  256 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-----~~~~~~~~~~~i~~~Dva  256 (296)
                              .+...|+.+|++.+.+.+       ..|+++++|+||.+.++.......     ..........+.+++|+|
T Consensus       158 --------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva  229 (257)
T 3tpc_A          158 --------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYA  229 (257)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHH
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHH
Confidence                    235679999999997764       268999999999999875432110     001111113478999999


Q ss_pred             HHHHHHhcCCCCCCCeEEEEe
Q 022495          257 EVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       257 ~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      ++++.++......|+++++.+
T Consensus       230 ~~v~~l~s~~~itG~~i~vdG  250 (257)
T 3tpc_A          230 ALVKHICENTMLNGEVIRLDG  250 (257)
T ss_dssp             HHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHHHcccCCcCCcEEEECC
Confidence            999999987666777887765

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.94  E-value=1.9e-25  Score=189.00  Aligned_cols=201  Identities=13%  Similarity=0.098  Sum_probs=145.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc-------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DD  135 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~~  135 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++..+.......++.++.+|++| .+++.++++       + 
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~-   79 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGS-   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSC-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHHcCC-
Confidence            3568999999999999999999999999999999999876654432223468899999999 888777665       5 


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    .+.+..             +.+++.|++.+.++||++||...+...            .+
T Consensus        80 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~  147 (254)
T 1hdc_A           80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL------------AL  147 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC------------CC
Confidence            9999999997543211    111111             578888888877899999999765422            22


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC---ceeecccCc-cccCCc-CHHHHHHHHHHHhcCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG---NIIMETEDT-LYEGTI-SRDQVAEVAVEALLHP  266 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~---~~~~~~~~~-~~~~~i-~~~Dva~~i~~~l~~~  266 (296)
                      ...|+.+|++.+.+.+       ..++++++|+||+++++....   ......... ....+. +++|+|++++.++..+
T Consensus       148 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~  227 (254)
T 1hdc_A          148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT  227 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCch
Confidence            4679999999998764       258999999999999864211   000000000 112356 9999999999988754


Q ss_pred             C--CCCCeEEEEe
Q 022495          267 E--SSYKVVEIIS  277 (296)
Q Consensus       267 ~--~~~~~~~i~~  277 (296)
                      .  ..++.+++.+
T Consensus       228 ~~~~tG~~~~vdg  240 (254)
T 1hdc_A          228 SSYVTGAELAVDG  240 (254)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             hcCCCCCEEEECC
Confidence            2  3567777655

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.94  E-value=2.9e-25  Score=185.77  Aligned_cols=197  Identities=13%  Similarity=0.035  Sum_probs=142.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~v  139 (296)
                      +|+||||||+++||+++|+.|+++|++|++.+|+++...+... ...++.++++|++| .++++++++.      ++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-ERPNLFYFHGDVAD-PLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hcCCEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999999999999887766544 45689999999999 7776665532      49999


Q ss_pred             EEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          140 VCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       140 v~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |||||........    +.+..             +.+++.|++.+ ++||++||...+...            .....|
T Consensus        80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~------------~~~~~Y  146 (247)
T 3ged_A           80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSE------------PDSEAY  146 (247)
T ss_dssp             EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCC------------TTCHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCC------------CCCHHH
Confidence            9999975432211    11221             77788888766 799999999754322            124569


Q ss_pred             HHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEE
Q 022495          203 LIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEII  276 (296)
Q Consensus       203 ~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~  276 (296)
                      +++|+++..+.+.      .+++++.|.||++.++.................+..++|+|++++.++......|+++.+-
T Consensus       147 ~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~~~iTG~~i~VD  226 (247)
T 3ged_A          147 ASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQDFITGETIIVD  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHHCSSCCSCEEEES
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhCCCCCCCeEEEC
Confidence            9999999876652      4899999999999887543221110011111236789999999999887554556666664


Q ss_pred             e
Q 022495          277 S  277 (296)
Q Consensus       277 ~  277 (296)
                      +
T Consensus       227 G  227 (247)
T 3ged_A          227 G  227 (247)
T ss_dssp             T
T ss_pred             c
Confidence            4

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.94  E-value=2.1e-26  Score=196.52  Aligned_cols=204  Identities=19%  Similarity=0.174  Sum_probs=152.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |+|+||||+||||++++++|++ |++|++++|++...        .+   +.+|++| .+.+.+++++ ++|+||||||.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~--------~~---~~~Dl~~-~~~~~~~~~~~~~d~vi~~a~~   67 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ--------GG---YKLDLTD-FPRLEDFIIKKRPDVIINAAAM   67 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT--------TC---EECCTTS-HHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC--------CC---ceeccCC-HHHHHHHHHhcCCCEEEECCcc
Confidence            4799999999999999999994 89999999987421        12   8899999 8889888874 49999999996


Q ss_pred             CCCC----CCcchhH-----HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          146 QPGW----DLFAPWK-----AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       146 ~~~~----~~~~~~~-----~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      ....    +......     ..++++++++.+. +||++||..+|+...+ +..+. .+..+.+.|+.+|.++|.+++. 
T Consensus        68 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~-~~~~~~~~Y~~sK~~~e~~~~~-  143 (273)
T 2ggs_A           68 TDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEE-DIPNPINYYGLSKLLGETFALQ-  143 (273)
T ss_dssp             CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTT-SCCCCSSHHHHHHHHHHHHHCC-
T ss_pred             cChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCC-CCCCCCCHHHHHHHHHHHHHhC-
Confidence            5421    1111111     1899999998886 9999999999976543 33333 2345567899999999999976 


Q ss_pred             CCcEEEEecCcccCCCCCCcee----ecc-----cCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHH
Q 022495          217 GINYTIIRPGGLRNEPPTGNII----MET-----EDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYE  287 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~~~~----~~~-----~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~  287 (296)
                       +++++|||+.+||+.......    ...     ... ...+++++|+|++++.++..+.  ..+|++.+    ..+++.
T Consensus       144 -~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~----~~~s~~  215 (273)
T 2ggs_A          144 -DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK--TGIIHVAG----ERISRF  215 (273)
T ss_dssp             -TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC--CEEEECCC----CCEEHH
T ss_pred             -CCeEEEeccccccccHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc--CCeEEECC----CcccHH
Confidence             899999999999732100000    000     011 4568999999999999998753  33777754    789999


Q ss_pred             HHHHHhhc
Q 022495          288 DLFGSIKQ  295 (296)
Q Consensus       288 el~~~i~~  295 (296)
                      |+++.+.+
T Consensus       216 e~~~~~~~  223 (273)
T 2ggs_A          216 ELALKIKE  223 (273)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998865

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.94  E-value=4.4e-25  Score=186.29  Aligned_cols=201  Identities=16%  Similarity=0.207  Sum_probs=139.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhhcccCCCCCeEEEEcccCCChHHHHHHh-------cC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI-------GD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++ ++..+.+.....++.++.+|++| .+++.+++       ++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999999999999998 65543332234578999999999 88777664       45


Q ss_pred             CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                       +|+||||||.......    .+.+..             +.+++.|++.+.++||++||...+...            .
T Consensus        83 -id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~  149 (249)
T 2ew8_A           83 -CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI------------E  149 (249)
T ss_dssp             -CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC------------S
T ss_pred             -CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC------------C
Confidence             9999999997543211    111111             666677887777899999999766432            2


Q ss_pred             hhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeec--c-cC---ccccCCcCHHHHHHHHHHHhc
Q 022495          198 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME--T-ED---TLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~--~-~~---~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      +...|+.+|.+.+.+.+.       .|+++++|+||.+.++.........  . ..   .....+.+++|+|++++.++.
T Consensus       150 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s  229 (249)
T 2ew8_A          150 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS  229 (249)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTS
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcC
Confidence            246799999999987652       5899999999999987543111000  0 00   111346899999999998886


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      .+.  ..|+++++.+
T Consensus       230 ~~~~~~tG~~~~vdG  244 (249)
T 2ew8_A          230 DDASFITGQTLAVDG  244 (249)
T ss_dssp             GGGTTCCSCEEEESS
T ss_pred             cccCCCCCcEEEECC
Confidence            532  3566777655

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.94  E-value=1.3e-25  Score=192.78  Aligned_cols=203  Identities=15%  Similarity=0.176  Sum_probs=145.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc------------hhhh---cccCCCCCeEEEEcccCCChH
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD------------KAKT---TLSKDNPSLQIVKADVTEGSA  126 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~------------~~~~---~~~~~~~~~~~~~~D~~d~~~  126 (296)
                      .++++|++|||||+|+||+++++.|+++|++|++++|++.            ...+   .+.....++.++.+|++| .+
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~   84 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD-RA   84 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC-HH
Confidence            3567899999999999999999999999999999999732            2211   111234679999999999 88


Q ss_pred             HHHHHhcC------CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccC
Q 022495          127 KLSEAIGD------DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGA  183 (296)
Q Consensus       127 ~~~~~~~~------~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~  183 (296)
                      ++.++++.      ++|+||||||+.....    ..+.+..             +.+++.+++.+.++||++||...+..
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence            77776652      3999999999754321    1111111             56666677777789999999976543


Q ss_pred             ccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-----ee----c-------
Q 022495          184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----IM----E-------  240 (296)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-----~~----~-------  240 (296)
                      .            .+...|+.+|++.+.+.+       .+|+++++|+||.++++......     ..    .       
T Consensus       165 ~------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (281)
T 3s55_A          165 N------------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVES  232 (281)
T ss_dssp             C------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHH
T ss_pred             C------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHH
Confidence            2            235679999999998765       25899999999999998654311     00    0       


Q ss_pred             ---ccCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          241 ---TEDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       241 ---~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                         ........+.+++|+|++++.++....  ..|+++++.+
T Consensus       233 ~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  274 (281)
T 3s55_A          233 VFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA  274 (281)
T ss_dssp             HHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence               001112457899999999998887543  3467777765

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.94  E-value=1.3e-25  Score=186.66  Aligned_cols=185  Identities=18%  Similarity=0.148  Sum_probs=135.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv~  141 (296)
                      ++||++|||||+++||+++++.|+++|++|++.+|+.+...+.   ...++..+.+|++| .+.++++++.  ++|++||
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---~~~~~~~~~~Dv~~-~~~v~~~~~~~g~iDiLVN   84 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---RHPRIRREELDITD-SQRLQRLFEALPRLDVLVN   84 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---CCTTEEEEECCTTC-HHHHHHHHHHCSCCSEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---hcCCeEEEEecCCC-HHHHHHHHHhcCCCCEEEE
Confidence            4699999999999999999999999999999999998776543   34689999999999 8888777654  5999999


Q ss_pred             cCCCCCCCCCc--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHH
Q 022495          142 ATGFQPGWDLF--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK  206 (296)
Q Consensus       142 ~ag~~~~~~~~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK  206 (296)
                      |||+.......  +.++.             +.+++.+++.+ ++||++||+..+...            .....|+++|
T Consensus        85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~------------~~~~~Y~asK  151 (242)
T 4b79_A           85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGS------------ADRPAYSASK  151 (242)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCC------------SSCHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCC------------CCCHHHHHHH
Confidence            99986532211  11211             77788887766 799999999754322            1245799999


Q ss_pred             HHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHHHHhcC
Q 022495          207 LQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       207 ~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .++..+.+       .+|||++.|.||.+.++.......-..      .......+..++|+|.+++.++.+
T Consensus       152 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd  223 (242)
T 4b79_A          152 GAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGP  223 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            99998765       369999999999999875432211000      001112367899999998777643

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.94  E-value=1.1e-25  Score=192.98  Aligned_cols=203  Identities=15%  Similarity=0.180  Sum_probs=147.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|+.+...+.......++.++.+|++| .+++.++++.      +
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~  101 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSS-AKDAESMVEKTTAKWGR  101 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence            56788999999999999999999999999999999999877655433234678999999999 8877766652      3


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    .+.+..             +.+++.+++.+.++||++||...+...            .+
T Consensus       102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~  169 (277)
T 4dqx_A          102 VDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI------------AD  169 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC------------TT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC------------CC
Confidence            9999999997543211    111111             667777777777899999998765432            23


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-------ee---cccCccccCCcCHHHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-------IM---ETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-------~~---~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      ...|+.+|++.+.+.+       ..|+++++|+||.+.++......       ..   .........+.+++|+|++++.
T Consensus       170 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~  249 (277)
T 4dqx_A          170 RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLF  249 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHH
Confidence            5679999999998765       25899999999999886411100       00   0011112346789999999998


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++....  ..|+++++.+
T Consensus       250 L~s~~~~~itG~~i~vdG  267 (277)
T 4dqx_A          250 LASDRSRFATGSILTVDG  267 (277)
T ss_dssp             HHSGGGTTCCSCEEEESS
T ss_pred             HhCCccCCCcCCEEEECC
Confidence            887543  3567777765

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.94  E-value=2.1e-25  Score=189.96  Aligned_cols=198  Identities=19%  Similarity=0.233  Sum_probs=144.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|++|||||+|+||+++++.|+++|++|++++|+.++..+..   ..++.++.+|++| .+++.++++.      ++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN---LPNTLCAQVDVTD-KYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC---CTTEEEEECCTTC-HHHHHHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh---cCCceEEEecCCC-HHHHHHHHHHHHHHCCCC
Confidence            456899999999999999999999999999999999988766543   2478999999999 8777766651      39


Q ss_pred             CEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||||.......    .+.+..             +.+++.+++.+.++||++||...+...            ...
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------------~~~  156 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF------------PDH  156 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------TTC
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC------------CCC
Confidence            999999997543211    111111             667788888888899999999765432            225


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec---cc---CccccCCcCHHHHHHHHHHHhcCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME---TE---DTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~---~~---~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ..|+.+|++.+.+.+       ..|+++++|+||.+.++.........   ..   ......+++++|+|++++.++..+
T Consensus       157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~  236 (266)
T 3p19_A          157 AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQP  236 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSC
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCC
Confidence            679999999997764       25899999999999987533211000   00   001234789999999999999887


Q ss_pred             CCCCCeEEEEe
Q 022495          267 ESSYKVVEIIS  277 (296)
Q Consensus       267 ~~~~~~~~i~~  277 (296)
                      .. ..+.++.-
T Consensus       237 ~~-~~~~~i~i  246 (266)
T 3p19_A          237 QN-VCIREIAL  246 (266)
T ss_dssp             TT-EEEEEEEE
T ss_pred             CC-ccceeeEE
Confidence            54 33555543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.94  E-value=1.8e-25  Score=190.20  Aligned_cols=202  Identities=16%  Similarity=0.158  Sum_probs=144.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc-------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------D  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~  134 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|++++..+.......++.++.+|++| .+++.++++       +
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTK-RASVDAAMQKAIDALGG   86 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTC-HHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence            45678999999999999999999999999999999999876654432222368899999999 888877765       5


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       +|+||||||........    +.+..             +.+++.+++.+ .++||++||...+...            
T Consensus        87 -iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------  153 (263)
T 3ak4_A           87 -FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA------------  153 (263)
T ss_dssp             -CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC------------
T ss_pred             -CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC------------
Confidence             99999999975432111    11111             55566666666 6899999998765321            


Q ss_pred             hhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee----e-----cc------cCccccCCcCHHH
Q 022495          197 NVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII----M-----ET------EDTLYEGTISRDQ  254 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~----~-----~~------~~~~~~~~i~~~D  254 (296)
                      .+...|+.+|++.+.+.+.       .|+++++|+||.++++.......    .     ..      .......+.+++|
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  233 (263)
T 3ak4_A          154 PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPED  233 (263)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHH
Confidence            1246799999999987652       49999999999999864211000    0     00      0011134789999


Q ss_pred             HHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          255 VAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       255 va~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|++++.++..+.  ..++++++.+
T Consensus       234 vA~~v~~l~s~~~~~~tG~~~~vdg  258 (263)
T 3ak4_A          234 VADVVVFLASDAARFMTGQGINVTG  258 (263)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHhCccccCCCCCEEEECc
Confidence            9999999887542  3567777765

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.94  E-value=7.1e-26  Score=192.33  Aligned_cols=207  Identities=14%  Similarity=0.145  Sum_probs=147.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhc-----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      .++++|+++||||+|+||+++++.|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++     
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   88 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK-AEDRERLVAMAVNL   88 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999976654322   1124578899999999 777776664     


Q ss_pred             --CCCCEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          134 --DDSEAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       134 --~~~d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                        + +|+||||||.......     .+.+..             +.+++.+++.+.++||++||..+|...         
T Consensus        89 ~g~-iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  158 (260)
T 2zat_A           89 HGG-VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF---------  158 (260)
T ss_dssp             HSC-CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------
T ss_pred             cCC-CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC---------
Confidence              5 9999999997432111     111111             566677777778899999999876432         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~  260 (296)
                         .+...|+.+|++.+.+.+.       .++++++|+||.+.++..........      .......+.+++|+|++++
T Consensus       159 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~  235 (260)
T 2zat_A          159 ---PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVS  235 (260)
T ss_dssp             ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHH
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence               2356799999999987752       48999999999999875321100000      0001134789999999998


Q ss_pred             HHhcCCC--CCCCeEEEEeCCCCCCCC
Q 022495          261 EALLHPE--SSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~~~~~~~~~  285 (296)
                      .++..+.  ..++++++.+   |...+
T Consensus       236 ~l~s~~~~~~tG~~~~vdg---G~~~s  259 (260)
T 2zat_A          236 FLCSEDASYITGETVVVGG---GTASR  259 (260)
T ss_dssp             HHTSGGGTTCCSCEEEEST---TCCCC
T ss_pred             HHcCcccCCccCCEEEECC---Ccccc
Confidence            8886543  2567777766   55554

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.94  E-value=2e-25  Score=190.23  Aligned_cols=203  Identities=14%  Similarity=0.119  Sum_probs=144.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-----CCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      .++++|+++||||+|+||+++++.|+++|++|++++|++++..+....     ...++.++.+|++| .+++.++++.  
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~   87 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATT   87 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC-HHHHHHHHHHHH
Confidence            456789999999999999999999999999999999998665432210     14578999999999 8877776652  


Q ss_pred             ----CCCEEEEcCCCCCC-CCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          135 ----DSEAVVCATGFQPG-WDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~-~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                          ++|+||||||.... ...    .+.+..             +.+++.|++.+.++||++||...+...        
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  159 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--------  159 (267)
T ss_dssp             HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC--------
Confidence                39999999997543 111    111111             677888888777899999998765321        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC-------ceee----cc-cCccccCCcCHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG-------NIIM----ET-EDTLYEGTISRD  253 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~-------~~~~----~~-~~~~~~~~i~~~  253 (296)
                          .+...|+.+|++.+.+.+       ..|+++++|+||.++++....       ....    .. .......+.+++
T Consensus       160 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  235 (267)
T 1iy8_A          160 ----GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP  235 (267)
T ss_dssp             ----SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHH
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHH
Confidence                225679999999998765       258999999999998864211       0000    00 000113467999


Q ss_pred             HHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          254 QVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       254 Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |+|++++.++..+.  ..|+++++.+
T Consensus       236 dvA~~v~~l~s~~~~~~tG~~i~vdG  261 (267)
T 1iy8_A          236 EIAAVVAFLLSDDASYVNATVVPIDG  261 (267)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHcCccccCCCCCEEEECC
Confidence            99999998886542  3566776655

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.94  E-value=1.8e-25  Score=189.37  Aligned_cols=209  Identities=14%  Similarity=0.111  Sum_probs=149.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.+...+..   .....++.++.+|++| .+++.++++.    
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD-EQHREAVIKAALDQ   86 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999987654322   2234689999999999 7777766641    


Q ss_pred             --CCCEEEEcCCCCCCCCC---cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 --DSEAVVCATGFQPGWDL---FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~---~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                        ++|+||||||.......   .+.+..             +.+++.+++.+.++||++||...+...            
T Consensus        87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------  154 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN------------  154 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC------------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC------------
Confidence              39999999997543221   111111             666777777777899999999765322            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce----ee-cccCccccCCcCHHHHHHHHHHHhc
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI----IM-ETEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~----~~-~~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      .+...|+.+|++.+.+.+       ..+++++.|+||.+.++......    .. .........+.+++|+|++++.++.
T Consensus       155 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s  234 (256)
T 3gaf_A          155 VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCS  234 (256)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            235679999999998775       25899999999999986421110    00 0011112347899999999998886


Q ss_pred             CCC--CCCCeEEEEeCCCCCCCCH
Q 022495          265 HPE--SSYKVVEIISRVDAPKRSY  286 (296)
Q Consensus       265 ~~~--~~~~~~~i~~~~~~~~~~~  286 (296)
                      ...  ..|+++++.+   |...++
T Consensus       235 ~~~~~itG~~i~vdg---G~~~~~  255 (256)
T 3gaf_A          235 PAAAWISGQVLTVSG---GGVQEL  255 (256)
T ss_dssp             GGGTTCCSCEEEEST---TSCCC-
T ss_pred             CcccCccCCEEEECC---CccccC
Confidence            432  3567777765   555543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.94  E-value=1e-25  Score=189.41  Aligned_cols=201  Identities=14%  Similarity=0.088  Sum_probs=143.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv  140 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+... ...+++++.+|++| .+.+.++++.  ++|+||
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK-ECPGIEPVCVDLGD-WDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HSTTCEEEECCTTC-HHHHHHHHTTCCCCSEEE
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hccCCCcEEecCCC-HHHHHHHHHHcCCCCEEE
Confidence            4678999999999999999999999999999999999876554332 12467888999999 8999988864  489999


Q ss_pred             EcCCCCCCCCC----cchhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          141 CATGFQPGWDL----FAPWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       141 ~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      ||||.......    ...+..             +.+++.+++.+ .++||++||..+|...            .+...|
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y  149 (244)
T 1cyd_A           82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------------PNLITY  149 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TTBHHH
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC------------CCcchh
Confidence            99996542211    111110             44555555556 6799999999876532            124679


Q ss_pred             HHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceee----c--ccCccccCCcCHHHHHHHHHHHhcCCC--
Q 022495          203 LIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIM----E--TEDTLYEGTISRDQVAEVAVEALLHPE--  267 (296)
Q Consensus       203 ~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~----~--~~~~~~~~~i~~~Dva~~i~~~l~~~~--  267 (296)
                      +.+|++.+.+++.       .++++++++||.++++........    .  ........+++++|+|++++.++..+.  
T Consensus       150 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (244)
T 1cyd_A          150 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAS  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhc
Confidence            9999999987752       589999999999998642211000    0  000112458999999999999997643  


Q ss_pred             CCCCeEEEEe
Q 022495          268 SSYKVVEIIS  277 (296)
Q Consensus       268 ~~~~~~~i~~  277 (296)
                      ..++.+++.+
T Consensus       230 ~~G~~~~v~g  239 (244)
T 1cyd_A          230 TSGGGILVDA  239 (244)
T ss_dssp             CCSSEEEEST
T ss_pred             ccCCEEEECC
Confidence            3466666654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.94  E-value=2.9e-25  Score=188.56  Aligned_cols=201  Identities=15%  Similarity=0.204  Sum_probs=144.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-----CCCCeEEEEcccCCChHHHHHHhc----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIG----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~----  133 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+....     ...++.++.+|++| .+++.++++    
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~   82 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE-PGDIDRLFEKARD   82 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999998665432210     02378999999999 888888887    


Q ss_pred             --CCCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          134 --DDSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       134 --~~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        + +|+||||||.......    .+.+..             +.+++.+++.+.++||++||..++...          
T Consensus        83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  151 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW----------  151 (260)
T ss_dssp             TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC----------
Confidence              6 9999999997543211    111111             677788888788899999999776432          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC---------cee----eccc--CccccCCcCH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG---------NII----METE--DTLYEGTISR  252 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~---------~~~----~~~~--~~~~~~~i~~  252 (296)
                        .+...|+.+|++.+.+.+       ..|+++++|+||+++++....         ...    ....  ......+.++
T Consensus       152 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  229 (260)
T 2z1n_A          152 --QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKP  229 (260)
T ss_dssp             --TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCH
Confidence              224679999999987764       248999999999999876431         000    0000  0011236799


Q ss_pred             HHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          253 DQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|+|++++.++..+.  ..|+++++.+
T Consensus       230 ~dva~~v~~l~s~~~~~~tG~~i~vdG  256 (260)
T 2z1n_A          230 EELASVVAFLASEKASFITGAVIPVDG  256 (260)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            999999998887532  3566776654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=2.7e-25  Score=186.83  Aligned_cols=201  Identities=13%  Similarity=0.124  Sum_probs=144.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv  140 (296)
                      ++++|+|+||||+|+||++++++|+++|++|++++|++++..+... ...++.++.+|++| .+++.++++.  ++|+||
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR-ECPGIEPVCVDLGD-WEATERALGSVGPVDLLV   81 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HSTTCEEEECCTTC-HHHHHHHHTTCCCCCEEE
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCCCEEEEeCCC-HHHHHHHHHHcCCCCEEE
Confidence            4678999999999999999999999999999999999876654332 11357788999999 8999988863  499999


Q ss_pred             EcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          141 CATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       141 ~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      ||||........    ..+..             +.+++.+++.+ .++||++||...+...            .+...|
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y  149 (244)
T 3d3w_A           82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------------TNHSVY  149 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TTBHHH
T ss_pred             ECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC------------CCCchH
Confidence            999975422111    11111             45555565556 6899999998765422            235679


Q ss_pred             HHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHHHHhcCCC--
Q 022495          203 LIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAVEALLHPE--  267 (296)
Q Consensus       203 ~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~~l~~~~--  267 (296)
                      +.+|+++|.+++.       .++++++|+||.++++..........      .......+++++|+|++++.++..+.  
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (244)
T 3d3w_A          150 CSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGM  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            9999999987752       58999999999999875321100000      00112357899999999999987542  


Q ss_pred             CCCCeEEEEe
Q 022495          268 SSYKVVEIIS  277 (296)
Q Consensus       268 ~~~~~~~i~~  277 (296)
                      ..++++++.+
T Consensus       230 ~~G~~~~v~g  239 (244)
T 3d3w_A          230 TTGSTLPVEG  239 (244)
T ss_dssp             CCSCEEEEST
T ss_pred             CCCCEEEECC
Confidence            3577887765

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.94  E-value=1.8e-26  Score=198.21  Aligned_cols=208  Identities=19%  Similarity=0.230  Sum_probs=146.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCC---CCeEEEEcccCCChHHHHHHhcC-
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDN---PSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~---~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|++++..+..   ....   .++.++.+|++| .+++.++++. 
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~   85 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN-EDETARAVDAV   85 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS-HHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC-HHHHHHHHHHH
Confidence            3567899999999999999999999999999999999987654322   1111   278999999999 7777766642 


Q ss_pred             -----CCCEEEEcCCCCCCCCCc-----chhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          135 -----DSEAVVCATGFQPGWDLF-----APWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 -----~~d~vv~~ag~~~~~~~~-----~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                           ++|+||||||........     +.+.      .       +.+++.+++.+.++||++||...+...       
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  158 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH-------  158 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-------
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC-------
Confidence                 499999999973221111     1111      1       566667777777799999999765432       


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEV  258 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~  258 (296)
                           .+...|+.+|++.+.+.+       ..++++++|+||.+.++.........      ........+.+++|+|++
T Consensus       159 -----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  233 (281)
T 3svt_A          159 -----RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANM  233 (281)
T ss_dssp             -----TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHH
T ss_pred             -----CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence                 224679999999998775       25799999999999987532210000      000111346789999999


Q ss_pred             HHHHhcCCC--CCCCeEEEEeCCCCCCCC
Q 022495          259 AVEALLHPE--SSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~~~~~~~~~~  285 (296)
                      ++.++....  ..|+++++.+   |...+
T Consensus       234 ~~~l~s~~~~~itG~~~~vdg---G~~~~  259 (281)
T 3svt_A          234 AMFLLSDAASFVTGQVINVDG---GQMLR  259 (281)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST---TGGGS
T ss_pred             HHHHhCcccCCCCCCEEEeCC---Chhcc
Confidence            998887543  3577888765   45444

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.7e-26  Score=196.86  Aligned_cols=209  Identities=17%  Similarity=0.174  Sum_probs=148.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc---ccC--CCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSK--DNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~--~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||+|+||+++++.|+++|++|++++|++++..+.   +..  ...++.++.+|++| .+++.++++.    
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC-HHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999997654321   111  13468899999999 7877766543    


Q ss_pred             --CCCEEEEcCCCCCCCCCcchhHH---------HHHHHHHHHcC---CCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          135 --DSEAVVCATGFQPGWDLFAPWKA---------INLVEACRKRG---VNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~~~~~~---------~~~l~~~~~~~---~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                        ++|+||||||.....+.......         +.+++.+++.+   .++||++||..++...            ....
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~  151 (267)
T 2gdz_A           84 FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------------AQQP  151 (267)
T ss_dssp             HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------TTCH
T ss_pred             cCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC------------CCCc
Confidence              38999999997542221111111         67788887653   5799999999776432            1245


Q ss_pred             HHHHHHHHHHHHHH---------HhCCcEEEEecCcccCCCCCCcee---eccc---------CccccCCcCHHHHHHHH
Q 022495          201 LTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGNII---METE---------DTLYEGTISRDQVAEVA  259 (296)
Q Consensus       201 ~y~~sK~~~e~~~~---------~~~~~~~~lrp~~i~g~~~~~~~~---~~~~---------~~~~~~~i~~~Dva~~i  259 (296)
                      .|+.+|++.+.+.+         ..++++++|+||.+.++.......   ....         .....++++++|+|+++
T Consensus       152 ~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v  231 (267)
T 2gdz_A          152 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL  231 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHH
Confidence            69999999987654         258999999999998863211000   0000         00112478999999999


Q ss_pred             HHHhcCCCCCCCeEEEEeCCCCCCCCHHH
Q 022495          260 VEALLHPESSYKVVEIISRVDAPKRSYED  288 (296)
Q Consensus       260 ~~~l~~~~~~~~~~~i~~~~~~~~~~~~e  288 (296)
                      +.++.++...++++++.+   +...++.|
T Consensus       232 ~~l~s~~~~~G~~~~v~g---g~~~~~~~  257 (267)
T 2gdz_A          232 ITLIEDDALNGAIMKITT---SKGIHFQD  257 (267)
T ss_dssp             HHHHHCTTCSSCEEEEET---TTEEEECC
T ss_pred             HHHhcCcCCCCcEEEecC---CCcccccC
Confidence            999987767788998877   45555443

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.93  E-value=6.8e-25  Score=187.40  Aligned_cols=202  Identities=16%  Similarity=0.099  Sum_probs=146.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.      ++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTN-EVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence            5678999999999999999999999999999999999877654433224678999999999 8877776652      39


Q ss_pred             CEEEEcCCCCCC-CCC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          137 EAVVCATGFQPG-WDL-----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       137 d~vv~~ag~~~~-~~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      |+||||||.... ...     .+.+..             +.+++.+++.+.++||++||...+...            .
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~  154 (271)
T 3tzq_B           87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY------------D  154 (271)
T ss_dssp             CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC------------S
T ss_pred             CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC------------C
Confidence            999999997522 111     111111             566666688888899999999765432            2


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      +...|+.+|++.+.+.+       .+|+++++|+||.++++.........     ........+.+++|+|++++.++..
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~  234 (271)
T 3tzq_B          155 MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASD  234 (271)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            35679999999998765       26899999999999998644221100     0011113467899999999988875


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      ..  ..|+++++.+
T Consensus       235 ~~~~itG~~i~vdG  248 (271)
T 3tzq_B          235 RAAFITGQVIAADS  248 (271)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             ccCCcCCCEEEECC
Confidence            43  3567777765

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.93  E-value=6.4e-27  Score=197.72  Aligned_cols=206  Identities=13%  Similarity=0.070  Sum_probs=141.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc----CCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG----DDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~~~d~vv~  141 (296)
                      ||+||||||+||||++++++|+++|++|++++|++++...          .+.+|++| .+.+.++++    + +|+|||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~D~~~-~~~~~~~~~~~~~~-~d~vi~   68 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------DLSTPGGR-ETAVAAVLDRCGGV-LDGLVC   68 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------CTTSHHHH-HHHHHHHHHHHTTC-CSEEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------cccCCccc-HHHHHHHHHHcCCC-ccEEEE
Confidence            3689999999999999999999999999999998765321          16789999 888888775    6 999999


Q ss_pred             cCCCCCCC-CCcchhHH-----HHHHH----HHHHcCCCEEEEEccceeccCccCccC--------Chhh------hhhh
Q 022495          142 ATGFQPGW-DLFAPWKA-----INLVE----ACRKRGVNRFILISSILVNGAAMGQIL--------NPAY------IFLN  197 (296)
Q Consensus       142 ~ag~~~~~-~~~~~~~~-----~~~l~----~~~~~~~~~iV~~SS~~~~~~~~~~~~--------~~~~------~~~~  197 (296)
                      |||..... ........     .++++    .+++.+.++||++||..+|+.......        ++..      ....
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (255)
T 2dkn_A           69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ  148 (255)
T ss_dssp             CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence            99975522 11111111     44444    455556789999999998865421110        0000      0113


Q ss_pred             hhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee-------ecccCccccCCcCHHHHHHHHHHHh
Q 022495          198 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII-------METEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~-------~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      +...|+.+|+++|.+++.       .++++++||||.++|+.......       ..........+++++|+|++++.++
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  228 (255)
T 2dkn_A          149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLL  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence            567899999999987753       58999999999999864221100       0000002235899999999999999


Q ss_pred             cCC--CCCCCeEEEEeCCCCCCCCH
Q 022495          264 LHP--ESSYKVVEIISRVDAPKRSY  286 (296)
Q Consensus       264 ~~~--~~~~~~~~i~~~~~~~~~~~  286 (296)
                      ..+  ...++.+++.+   +...++
T Consensus       229 ~~~~~~~~G~~~~v~g---g~~~~~  250 (255)
T 2dkn_A          229 GPQASFIHGSVLFVDG---GMDALM  250 (255)
T ss_dssp             SGGGTTCCSCEEEEST---THHHHH
T ss_pred             CCCcccceeeEEEecC---CeEeee
Confidence            865  34577888876   444443

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.93  E-value=1.7e-25  Score=188.62  Aligned_cols=203  Identities=14%  Similarity=0.120  Sum_probs=145.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+++...+.......++.++.+|++| .+++.++++.      +
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~   83 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN-PESIEAVLKAITDEFGG   83 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence            45678999999999999999999999999999999999876654332222467899999999 8877776651      3


Q ss_pred             CCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||+.......    +.+..             +.+++.+++.+.++||++||...+..            ..+
T Consensus        84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~  151 (248)
T 3op4_A           84 VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG------------NAG  151 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC------------CTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC------------CCC
Confidence            99999999976432211    11111             66667777777789999999865432            223


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----cccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ...|+.+|++.+.+.+       ..|+++++|+||.+.++........    .........+.+++|+|++++.++....
T Consensus       152 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~  231 (248)
T 3op4_A          152 QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEA  231 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence            5679999999987765       3589999999999998764321100    0001112347899999999988886533


Q ss_pred             --CCCCeEEEEe
Q 022495          268 --SSYKVVEIIS  277 (296)
Q Consensus       268 --~~~~~~~i~~  277 (296)
                        ..|+++++.+
T Consensus       232 ~~itG~~i~vdg  243 (248)
T 3op4_A          232 AYITGETLHVNG  243 (248)
T ss_dssp             TTCCSCEEEEST
T ss_pred             CCccCcEEEECC
Confidence              3467777755

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.93  E-value=7.4e-26  Score=192.24  Aligned_cols=202  Identities=14%  Similarity=0.106  Sum_probs=143.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHh------
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAI------  132 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~------  132 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|++++..+...   ....++.++.+|++| .+++.+++      
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANH   83 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999876543221   123578899999999 88777766      


Q ss_pred             --cCCCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          133 --GDDSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       133 --~~~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                        .+ +|+||||||.......    .+.+..             +.+++.+++.+.++||++||...+...         
T Consensus        84 ~~g~-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  153 (260)
T 2ae2_A           84 FHGK-LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV---------  153 (260)
T ss_dssp             TTTC-CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC---------
T ss_pred             cCCC-CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---------
Confidence              45 9999999997542211    111111             555666677777899999998765321         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCc---e-eec-----ccCccccCCcCHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGN---I-IME-----TEDTLYEGTISRDQVAE  257 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~---~-~~~-----~~~~~~~~~i~~~Dva~  257 (296)
                         .+...|+.+|++.+.+.+.       .++++++|+||.+.++.....   . ...     ........+.+++|+|+
T Consensus       154 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~  230 (260)
T 2ae2_A          154 ---PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAA  230 (260)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHH
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHH
Confidence               2246799999999987752       489999999999988632110   0 000     00011134789999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEe
Q 022495          258 VAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++.++..+.  ..|+++++.+
T Consensus       231 ~v~~l~s~~~~~~tG~~~~vdg  252 (260)
T 2ae2_A          231 MVAFLCFPAASYVTGQIIYVDG  252 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHcCccccCCCCCEEEECC
Confidence            9998886532  3567777755

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.93  E-value=6.3e-26  Score=196.69  Aligned_cols=218  Identities=14%  Similarity=0.183  Sum_probs=150.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC---C-CCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---D-NPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~-~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .++++|+++||||+|+||++++++|+++|++|++++|+.++..+....   . ..++.++.+|++| .+++.++++.   
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~  100 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-HHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999998665432211   1 3578999999999 8877766643   


Q ss_pred             ---CCCEEEEcCCCCCCCCC----cchhH------H-------HHHHHHHH-HcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 ---DSEAVVCATGFQPGWDL----FAPWK------A-------INLVEACR-KRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~----~~~~~------~-------~~~l~~~~-~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                         ++|+||||||.......    ...+.      .       +.+++.++ +.+.++||++||..++..          
T Consensus       101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~----------  170 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG----------  170 (302)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC----------
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC----------
Confidence               37999999996432111    11111      1       44455555 334579999999876532          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeec-------ccCccccCCcCHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME-------TEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~-------~~~~~~~~~i~~~Dva~~i  259 (296)
                        ..+...|+.+|++.+.+.+.       .|+++++|+||.++++.........       ........+.+++|+|+++
T Consensus       171 --~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~  248 (302)
T 1w6u_A          171 --SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLA  248 (302)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             --CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHH
Confidence              12356799999999987652       6899999999999986321111000       0001112468999999999


Q ss_pred             HHHhcCCC--CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          260 VEALLHPE--SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.++..+.  ..++++++.+   +..+++.|+++.+.+
T Consensus       249 ~~l~~~~~~~~~G~~~~v~g---g~~~~~~~~~~~~~~  283 (302)
T 1w6u_A          249 AFLCSDYASWINGAVIKFDG---GEEVLISGEFNDLRK  283 (302)
T ss_dssp             HHHTSGGGTTCCSCEEEEST---THHHHHHSTTGGGGG
T ss_pred             HHHcCCcccccCCCEEEECC---CeeeccCCccccchh
Confidence            98887543  2567788776   677777777766554

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.93  E-value=2.3e-25  Score=190.15  Aligned_cols=203  Identities=18%  Similarity=0.182  Sum_probs=144.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhh---cccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|. .+...+   .+.....++.++.+|++| .+++.++++.   
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~  102 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ-ESEVEALFAAVIE  102 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHH
Confidence            45778999999999999999999999999999999984 333322   122234678999999999 8877766652   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         ++|+||||||........    +.+..             +.+++.+++.+.++||++||...+...          
T Consensus       103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  172 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN----------  172 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC----------
Confidence               399999999976432211    11111             666666777777899999998754321          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-ccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-TEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                        .....|+.+|++.+.+.+       ..|+++++|+||.+.++......... ........+.+++|+|++++.++.++
T Consensus       173 --~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~  250 (269)
T 4dmm_A          173 --PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADP  250 (269)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCG
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCc
Confidence              235679999999987764       35899999999999997643321100 00111234788999999999998874


Q ss_pred             C---CCCCeEEEEe
Q 022495          267 E---SSYKVVEIIS  277 (296)
Q Consensus       267 ~---~~~~~~~i~~  277 (296)
                      .   ..|+++++.+
T Consensus       251 ~~~~itG~~i~vdG  264 (269)
T 4dmm_A          251 AAAYITGQVINIDG  264 (269)
T ss_dssp             GGGGCCSCEEEEST
T ss_pred             ccCCCcCCEEEECC
Confidence            3   3467777755

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.93  E-value=6.5e-26  Score=188.93  Aligned_cols=196  Identities=18%  Similarity=0.214  Sum_probs=140.9

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCE
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEA  138 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~  138 (296)
                      .|+|++|+++||||+++||+++++.|+++|++|++.+|+... ..+.+.....++.++.+|++| .+.+++.+.. ++|+
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~g~iDi   82 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFAD-PLAAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTS-TTTTTTSSTTTCCCE
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCC-HHHHHHHHHhCCCCE
Confidence            478999999999999999999999999999999999998642 222333355789999999999 7777776654 6999


Q ss_pred             EEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          139 VVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       139 vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      +|||||+.......    +.|..             +.+++.|++.+ .++||++||+..+....            ...
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~------------~~~  150 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI------------RVP  150 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS------------SCH
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC------------CCh
Confidence            99999976543221    12221             77888887765 57999999987543221            245


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----ccCcc-ccCCcCHHHHHHHHHHHhcCCC
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDTL-YEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~-~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      .|+++|.++..+.+       .+||+++.|.||+|.++.......-.     ..... ...+-.++|+|.+++.++. +.
T Consensus       151 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaS-d~  229 (247)
T 4hp8_A          151 SYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSS-AA  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTS-GG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC-ch
Confidence            69999999988765       46999999999999987532111000     00111 1235689999999777664 34


Q ss_pred             CCC
Q 022495          268 SSY  270 (296)
Q Consensus       268 ~~~  270 (296)
                      ..+
T Consensus       230 a~~  232 (247)
T 4hp8_A          230 ADY  232 (247)
T ss_dssp             GTT
T ss_pred             hcC
Confidence            333

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.93  E-value=1.9e-25  Score=190.28  Aligned_cols=203  Identities=17%  Similarity=0.132  Sum_probs=143.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.      +
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~  101 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSD-RKSIKQLAEVAEREMEG  101 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTS-HHHHHHHHHHHHHHHTS
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence            45778999999999999999999999999999999999877665443234679999999999 8877776651      3


Q ss_pred             CCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||........    +.+..             +.+++.+++.+.++||++||...+..            ..+
T Consensus       102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~------------~~~  169 (266)
T 3grp_A          102 IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG------------NPG  169 (266)
T ss_dssp             CCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------------------C
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC------------CCC
Confidence            99999999975432111    11111             77778888777789999999875432            123


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---e-ecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---I-METEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~-~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ...|+.+|++.+.+.+       ..|+++++|+||.+.++......   . ..........+.+++|+|++++.++....
T Consensus       170 ~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~  249 (266)
T 3grp_A          170 QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEA  249 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            5779999999987764       25899999999999886422110   0 00001112346789999999998886543


Q ss_pred             --CCCCeEEEEe
Q 022495          268 --SSYKVVEIIS  277 (296)
Q Consensus       268 --~~~~~~~i~~  277 (296)
                        ..|+++++.+
T Consensus       250 ~~itG~~i~vdG  261 (266)
T 3grp_A          250 AYLTGQTLHING  261 (266)
T ss_dssp             TTCCSCEEEEST
T ss_pred             cCccCCEEEECC
Confidence              3567777754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.93  E-value=6e-25  Score=185.33  Aligned_cols=198  Identities=17%  Similarity=0.142  Sum_probs=143.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----cCCCCCeEEEEcccCCChHHHHHHhc-------C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKDNPSLQIVKADVTEGSAKLSEAIG-------D  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~-------~  134 (296)
                      +|+++||||+|+||++++++|+++|++|++++|++++..+..    .....++.++.+|++| .+++.++++       +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD-EGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999976654322    1123568999999999 888877765       5


Q ss_pred             CCCEEEEcCCCCCCCC---C----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 DSEAVVCATGFQPGWD---L----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~---~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                       +|+||||||......   .    ...+..             +.+++.+++.+.++||++||...+...          
T Consensus        81 -id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  149 (250)
T 2cfc_A           81 -IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF----------  149 (250)
T ss_dssp             -CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             -CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------
Confidence             999999999754221   0    011111             567777777788899999998765432          


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceee----c--ccCccccCCcCHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIM----E--TEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~----~--~~~~~~~~~i~~~Dva~~i~~  261 (296)
                        .+...|+.+|++.+.+.+.       .++++++|+||.++++........    .  ........+.+++|+|++++.
T Consensus       150 --~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  227 (250)
T 2cfc_A          150 --PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMF  227 (250)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence              2256799999999987752       389999999999999864321100    0  000111346799999999999


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++..+.  ..|+.+++.+
T Consensus       228 l~~~~~~~~~G~~~~v~g  245 (250)
T 2cfc_A          228 LAGEDATYVNGAALVMDG  245 (250)
T ss_dssp             HHSTTCTTCCSCEEEEST
T ss_pred             HcCchhhcccCCEEEECC
Confidence            987653  3467777754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.93  E-value=1.5e-25  Score=189.73  Aligned_cols=200  Identities=16%  Similarity=0.135  Sum_probs=143.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccCCCCCeEEEEcccCCChHHHHHHhc-------CC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------DD  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~~  135 (296)
                      +++|+++||||+|+||++++++|+++|++|++++|+++. ..+.+.....++.++.+|++| .+++.++++       + 
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~-   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSD-VAQIEALFALAEREFGG-   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTS-HHHHHHHHHHHHHHHSS-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCC-HHHHHHHHHHHHHHcCC-
Confidence            468999999999999999999999999999999998752 111222234578899999999 888887776       5 


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    ...+..             +.+++.|++.+.++||++||...+...            ..
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~  147 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS------------TG  147 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC------------TT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC------------CC
Confidence            9999999997542211    111111             677888888888899999999765432            12


Q ss_pred             hHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce----ee--------c---ccCccccCCcCHHHHH
Q 022495          199 FGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI----IM--------E---TEDTLYEGTISRDQVA  256 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~----~~--------~---~~~~~~~~~i~~~Dva  256 (296)
                      ...|+.+|.+.+.+.+.       .++++++|+||.++++......    ..        .   ........+++++|+|
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  227 (255)
T 2q2v_A          148 KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLG  227 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHH
Confidence            46799999999987752       4899999999999986422100    00        0   0011123478999999


Q ss_pred             HHHHHHhcCCC--CCCCeEEEEe
Q 022495          257 EVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       257 ~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++++.++..+.  ..++++++.+
T Consensus       228 ~~~~~l~s~~~~~~tG~~~~vdg  250 (255)
T 2q2v_A          228 ELVLFLCSEAGSQVRGAAWNVDG  250 (255)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCCccCCCCCCEEEECC
Confidence            99998887543  3467777755

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.93  E-value=2.5e-24  Score=181.75  Aligned_cols=196  Identities=12%  Similarity=0.129  Sum_probs=133.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+++..      . .++.++.+|++| .+++.++++.      +
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~------~-~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------Q-YPFATEVMDVAD-AAQVAQVCQRLLAETER   74 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS------C-CSSEEEECCTTC-HHHHHHHHHHHHHHCSC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh------c-CCceEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            346789999999999999999999999999999999987521      1 238899999999 8888777651      3


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    .+.+..             +.+++.+++.+.++||++||...+...            .+
T Consensus        75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~  142 (250)
T 2fwm_X           75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR------------IG  142 (250)
T ss_dssp             CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------TT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC------------CC
Confidence            9999999997542211    111111             556666677777899999999765321            23


Q ss_pred             hHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee----ec-cc---------CccccCCcCHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII----ME-TE---------DTLYEGTISRDQVAE  257 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~----~~-~~---------~~~~~~~i~~~Dva~  257 (296)
                      ...|+.+|++.+.+.+.       .++++++|+||.++++.......    .. ..         ......+.+++|+|+
T Consensus       143 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~  222 (250)
T 2fwm_X          143 MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIAN  222 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHH
Confidence            56799999999987652       48999999999999875322100    00 00         001123678999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEe
Q 022495          258 VAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++.++..+.  ..|+++.+.+
T Consensus       223 ~v~~l~s~~~~~~tG~~i~vdG  244 (250)
T 2fwm_X          223 TILFLASDLASHITLQDIVVDG  244 (250)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCccccCCCCCEEEECC
Confidence            9999887642  3566776655

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.93  E-value=6.5e-25  Score=185.22  Aligned_cols=202  Identities=15%  Similarity=0.132  Sum_probs=141.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh--cccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT--TLSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++|++|++|||||+++||+++++.|+++|++|++.+|+.+....  .+.....++.++.+|++| .+.++++++.     
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQD-DAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC-HHHHHHHHHHHHHHh
Confidence            57889999999999999999999999999999999998765331  111235689999999999 7766655532     


Q ss_pred             -CCCEEEEcCCCCCCCCCc---chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF---APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~---~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                       ++|++|||||+.......   +.+..             +.+++.|++.+ ++||++||+..+...            .
T Consensus        82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~------------~  148 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQ------------G  148 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCC------------S
T ss_pred             CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCC------------C
Confidence             599999999975432211   11211             77888887765 799999999754322            1


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc---------cCccc--cCCcCHHHHHHHH
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET---------EDTLY--EGTISRDQVAEVA  259 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~---------~~~~~--~~~i~~~Dva~~i  259 (296)
                      ....|+++|++++.+.+       .+||+++.|.||.+.++..........         .....  ..+..++|+|.++
T Consensus       149 ~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v  228 (258)
T 4gkb_A          149 NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTA  228 (258)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            24679999999998765       469999999999999876443221100         01111  2367899999998


Q ss_pred             HHHhcCCC--CCCCeEEEEe
Q 022495          260 VEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~  277 (296)
                      +.++.+..  ..|+++.+-+
T Consensus       229 ~fLaS~~a~~iTG~~i~VDG  248 (258)
T 4gkb_A          229 VFLLSPRASHTTGEWLFVDG  248 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhcCccCCeEEECC
Confidence            87775432  2445555533

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.93  E-value=5.8e-25  Score=186.75  Aligned_cols=209  Identities=13%  Similarity=0.095  Sum_probs=140.9

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .+++++|+++||||+|+||++++++|+++|++|++++|++++..+.......++.++.+|++| .+++.++++.      
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISK-EADVDAAVEAALSKFG   82 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHhcC
Confidence            356789999999999999999999999999999999999887665443334679999999999 7877766652      


Q ss_pred             CCCEEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcC----CCEEEEEccceeccCccCccCChh
Q 022495          135 DSEAVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRG----VNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~----~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                      ++|+||||||........     +.+..             +.+++.+++.+    .++||++||...+...        
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  154 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR--------  154 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC--------
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC--------
Confidence            399999999975421111     11110             56666666543    4589999998754321        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-------c-ccCccccCCcCHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-------E-TEDTLYEGTISRDQVAE  257 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-------~-~~~~~~~~~i~~~Dva~  257 (296)
                          .....|+.+|++.+.+.+       ..++++++|+||.+.++........       . ........+++++|+|+
T Consensus       155 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (261)
T 3n74_A          155 ----PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAE  230 (261)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHH
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHH
Confidence                235679999999998764       2589999999999998753322100       0 00111134789999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEeCCCCCCCC
Q 022495          258 VAVEALLHPE--SSYKVVEIISRVDAPKRS  285 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~~~~~~~~~  285 (296)
                      +++.++....  ..|+++++.+   |..+.
T Consensus       231 ~~~~l~s~~~~~itG~~i~vdg---G~~~~  257 (261)
T 3n74_A          231 AAAFLCSPQASMITGVALDVDG---GRSIG  257 (261)
T ss_dssp             HHHHHTSGGGTTCCSCEEEEST---TTTC-
T ss_pred             HHHHHcCCcccCcCCcEEEecC---CcccC
Confidence            9998886432  4567777765   55544

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.93  E-value=6.8e-25  Score=186.07  Aligned_cols=205  Identities=16%  Similarity=0.129  Sum_probs=144.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|+|+||||+|+||++++++|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.    
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   87 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTN-TESVQNAVRSVHEQ   87 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999976544321   1124579999999999 8888777651    


Q ss_pred             --CCCEEEEcCCCCC-CCC--Cc--chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQP-GWD--LF--APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~-~~~--~~--~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|+||||||... ...  ..  ..+.    .         +.+++.+++.+.++||++||...+....+        
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------  159 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP--------  159 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC--------
Confidence              3999999999654 111  11  1111    1         44555555667789999999876543211        


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~  261 (296)
                        .+...|+.+|++.+.+++.       .++++++||||.++++..........      .......+++++|+|++++.
T Consensus       160 --~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (260)
T 3awd_A          160 --QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQF  237 (260)
T ss_dssp             --SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred             --CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence              1236799999999987752       68999999999999986431110000      00111347899999999999


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++..+.  ..++++++.+
T Consensus       238 l~~~~~~~~~G~~~~v~g  255 (260)
T 3awd_A          238 LASDAASLMTGAIVNVDA  255 (260)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhCchhccCCCcEEEECC
Confidence            887532  3567787765

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.93  E-value=1.1e-24  Score=184.72  Aligned_cols=202  Identities=14%  Similarity=0.129  Sum_probs=142.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++..+..   .....++.++.+|++| .+++.++++.     
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN-TDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999987655432   2234679999999999 7777766642     


Q ss_pred             -CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHH-HHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF----APWKA-------------INLVEAC-RKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~-~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||........    +.+..             +.+++.+ ++.+.++||++||...+...           
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  150 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-----------  150 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----------
Confidence             399999999965432211    11111             5555665 34446799999998765322           


Q ss_pred             hhhhHHHHHHHHHHHHHHH--------HhCCcEEEEecCcccCCCCCCceeeccc-------CccccCCcCHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR--------KSGINYTIIRPGGLRNEPPTGNIIMETE-------DTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~--------~~~~~~~~lrp~~i~g~~~~~~~~~~~~-------~~~~~~~i~~~Dva~~i~  260 (296)
                       .....|+.+|++.+.+.+        ..|+++++|+||.+.++...........       ......+.+++|+|++++
T Consensus       151 -~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  229 (257)
T 3imf_A          151 -PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAY  229 (257)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHH
T ss_pred             -CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             225679999999887653        3589999999999998753322111100       011134678999999999


Q ss_pred             HHhcCCC--CCCCeEEEEe
Q 022495          261 EALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~  277 (296)
                      .++....  ..|+++++.+
T Consensus       230 ~L~s~~~~~itG~~i~vdG  248 (257)
T 3imf_A          230 YLCSDEAAYINGTCMTMDG  248 (257)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHcCchhcCccCCEEEECC
Confidence            8887543  3566777755

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.93  E-value=5.4e-25  Score=186.02  Aligned_cols=201  Identities=14%  Similarity=0.145  Sum_probs=135.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.++..+...   ....++.++.+|++| .+++.++++.     
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN-EDEVTAFLNAADAHA   82 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC-HHHHHHHHHHHHhhC
Confidence            5678999999999999999999999999999999999877654321   134678999999999 8888777652     


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||........    +.+..             +.+++.+++.+.++||++||...+...            .
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~  150 (252)
T 3h7a_A           83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG------------S  150 (252)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC------------T
T ss_pred             CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC------------C
Confidence            389999999975432211    11111             667777888777899999998765322            2


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcE-EEEecCcccCCCCCCceee---cccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINY-TIIRPGGLRNEPPTGNIIM---ETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~-~~lrp~~i~g~~~~~~~~~---~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ....|+.+|++.+.+.+       ..|+++ ++|.||.+.++........   ........++.+++|+|++++.++..+
T Consensus       151 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~~~~l~s~~  230 (252)
T 3h7a_A          151 GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYWQLYQQP  230 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------CCHHHHHHHHHHHHHCC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCccCCCHHHHHHHHHHHHhCc
Confidence            35679999999997764       258999 8999999988754332110   011111223899999999999999876


Q ss_pred             CCCCCeEEEEe
Q 022495          267 ESSYKVVEIIS  277 (296)
Q Consensus       267 ~~~~~~~~i~~  277 (296)
                      .. ..+.++..
T Consensus       231 ~~-~~~~~i~~  240 (252)
T 3h7a_A          231 KS-AWTFEMEI  240 (252)
T ss_dssp             GG-GBCSEEEE
T ss_pred             hh-cceeeEEe
Confidence            54 33555554

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.93  E-value=2.9e-25  Score=187.25  Aligned_cols=203  Identities=14%  Similarity=0.091  Sum_probs=142.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~v  139 (296)
                      .++++|+||||||+|+||+++++.|+++|++|++++|+.++..+.......++.++.+|++| .+.+.++++.  ++|+|
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~l   88 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN-KEECSNLISKTSNLDIL   88 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTS-HHHHHHHHHTCSCCSEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCC-HHHHHHHHHhcCCCCEE
Confidence            45678999999999999999999999999999999999877665433223578999999999 8888888764  49999


Q ss_pred             EEcCCCCCCCC-----Ccch---hHH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          140 VCATGFQPGWD-----LFAP---WKA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       140 v~~ag~~~~~~-----~~~~---~~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |||||......     ....   ...         +.+++.+++.+.++||++||...+...            .+...|
T Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y  156 (249)
T 3f9i_A           89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN------------PGQANY  156 (249)
T ss_dssp             EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC------------SCSHHH
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC------------CCCchh
Confidence            99999654211     1111   111         566677777777899999998766432            125679


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----cccCccccCCcCHHHHHHHHHHHhcCCC--CC
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ETEDTLYEGTISRDQVAEVAVEALLHPE--SS  269 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~  269 (296)
                      +.+|++.+.+.+       ..++++++|+||.+.++........    .........+.+++|+|++++.++..+.  ..
T Consensus       157 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t  236 (249)
T 3f9i_A          157 CASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYIT  236 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCcc
Confidence            999999987764       2589999999999998753321100    0001112357889999999998887543  35


Q ss_pred             CCeEEEEe
Q 022495          270 YKVVEIIS  277 (296)
Q Consensus       270 ~~~~~i~~  277 (296)
                      |+++++.+
T Consensus       237 G~~~~vdg  244 (249)
T 3f9i_A          237 GQTLHVNG  244 (249)
T ss_dssp             SCEEEEST
T ss_pred             CcEEEECC
Confidence            77888765

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.93  E-value=6.5e-25  Score=186.60  Aligned_cols=210  Identities=18%  Similarity=0.111  Sum_probs=139.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC---CC-------CCeEEEEcccCCChHHHHHHh
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---DN-------PSLQIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~-------~~~~~~~~D~~d~~~~~~~~~  132 (296)
                      ++++|+|+||||+|+||+++++.|+++|++|++++|++++..+....   ..       .++.++.+|++| .+.+.+++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~   82 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSE-ARAARCLL   82 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTS-HHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCC-HHHHHHHH
Confidence            45689999999999999999999999999999999998765443211   11       468999999999 88777666


Q ss_pred             cC------CC-CEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCc
Q 022495          133 GD------DS-EAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       133 ~~------~~-d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~  187 (296)
                      ++      ++ |+||||||......    ....+..             +.+++.+++.+ .++||++||...+..    
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~----  158 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG----  158 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC----
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC----
Confidence            54      25 99999999754321    1111111             44455555555 579999999865422    


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce--eecc--cCccccCCcCHHHHH
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI--IMET--EDTLYEGTISRDQVA  256 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~--~~~~--~~~~~~~~i~~~Dva  256 (296)
                              ..+...|+.+|.+++.+.+.       .++++++|+||.++++......  ....  .......+.+++|+|
T Consensus       159 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (264)
T 2pd6_A          159 --------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVA  230 (264)
T ss_dssp             --------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHH
T ss_pred             --------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHH
Confidence                    12356799999999877642       6899999999999997543210  0000  001113467999999


Q ss_pred             HHHHHHhcCCC--CCCCeEEEEeCCCCCCCCHHH
Q 022495          257 EVAVEALLHPE--SSYKVVEIISRVDAPKRSYED  288 (296)
Q Consensus       257 ~~i~~~l~~~~--~~~~~~~i~~~~~~~~~~~~e  288 (296)
                      ++++.++..+.  ..++.+++.+   +..++...
T Consensus       231 ~~~~~l~~~~~~~~~G~~~~v~g---g~~~~~~~  261 (264)
T 2pd6_A          231 DVVAFLASEDSGYITGTSVEVTG---GLFMAENL  261 (264)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST---TC------
T ss_pred             HHHHHHcCCcccCCCCCEEEECC---Cceecccc
Confidence            99999887532  3566777765   55555443

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.93  E-value=6.9e-25  Score=184.77  Aligned_cols=202  Identities=13%  Similarity=0.127  Sum_probs=145.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.     
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISD-IESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHc
Confidence            456899999999999999999999999999999999987655332   1234679999999999 8877776643     


Q ss_pred             -CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||+.......    +.+..             +.+++.+++.+.++||++||...+..            .
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------~  148 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG------------N  148 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC------------C
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC------------C
Confidence             499999999976432211    11111             55666666677789999999875432            1


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee----ecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----METEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~----~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .....|+.+|++.+.+.+       ..++++++|+||.+.++.......    ..........+.+++|+|++++.++..
T Consensus       149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~  228 (247)
T 3lyl_A          149 PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASE  228 (247)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSG
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCC
Confidence            235679999999887764       358999999999999876433210    000111123478999999999988865


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      ..  ..|+++++.+
T Consensus       229 ~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          229 EAKYITGQTLHVNG  242 (247)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             CcCCccCCEEEECC
Confidence            43  3577787765

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.93  E-value=2.5e-25  Score=188.17  Aligned_cols=201  Identities=14%  Similarity=0.131  Sum_probs=143.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+.......++.++.+|++| .+++.++++.      ++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS-EADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTC-HHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999999876554322113578999999999 7777666543      38


Q ss_pred             CEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||||......    ..+.+..             +.+++.|++.+ ++||++||...+...            .+.
T Consensus        82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------~~~  148 (253)
T 1hxh_A           82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI------------EQY  148 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC------------TTB
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC------------CCC
Confidence            99999999754221    1111111             67778888777 899999999765422            235


Q ss_pred             HHHHHHHHHHHHHHHH-------h--CCcEEEEecCcccCCCCCC----cee---eccc--CccccCCcCHHHHHHHHHH
Q 022495          200 GLTLIAKLQAEQYIRK-------S--GINYTIIRPGGLRNEPPTG----NII---METE--DTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~~-------~--~~~~~~lrp~~i~g~~~~~----~~~---~~~~--~~~~~~~i~~~Dva~~i~~  261 (296)
                      ..|+.+|++.+.+.+.       .  ++++++|+||+++++....    ...   ....  ......+.+++|+|++++.
T Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~  228 (253)
T 1hxh_A          149 AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF  228 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHH
Confidence            6799999999987652       4  8999999999999864211    100   0000  1111236789999999999


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++..+.  ..++.+++.+
T Consensus       229 l~s~~~~~~tG~~~~vdg  246 (253)
T 1hxh_A          229 LASDESSVMSGSELHADN  246 (253)
T ss_dssp             HHSGGGTTCCSCEEEESS
T ss_pred             HcCccccCCCCcEEEECC
Confidence            887543  3466777655

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.93  E-value=6.3e-25  Score=186.69  Aligned_cols=204  Identities=17%  Similarity=0.170  Sum_probs=144.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCC-CCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKD-NPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~-~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+.++..+..   ... ..++.++.+|++| .+++.++++.   
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   84 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD-RAQCDALAGRAVE   84 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC-HHHHHHHHHHHHH
Confidence            4577899999999999999999999999999999999987654322   112 2578999999999 7877766641   


Q ss_pred             ---CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         ++|+||||||.......    .+.+..             +.+++.+++.+.++||++||...+..           
T Consensus        85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------  153 (262)
T 3pk0_A           85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT-----------  153 (262)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB-----------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC-----------
Confidence               39999999997543221    111111             66677777777789999999864211           


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCc---eeec-ccCccccCCcCHHHHHHHHHHHh
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGN---IIME-TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~---~~~~-~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      +......|+.+|++.+.+.+.       .|+++++|+||.++++.....   .... ........+.+++|+|++++.++
T Consensus       154 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~  233 (262)
T 3pk0_A          154 GYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLA  233 (262)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            112356799999999987752       689999999999998632111   0000 00111134678999999998888


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..|+++++.+
T Consensus       234 s~~~~~itG~~i~vdG  249 (262)
T 3pk0_A          234 TKEAGYITGQAIAVDG  249 (262)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CccccCCcCCEEEECC
Confidence            6543  4567777755

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.93  E-value=2.5e-25  Score=190.66  Aligned_cols=203  Identities=17%  Similarity=0.133  Sum_probs=145.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      .++++|++|||||+|+||+++++.|+++|++|++++|+.+...+.......++.++.+|++| .+++.++++.      +
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSD-EQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999999877655433224678999999999 7777766542      3


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||+......    .+.+..             +.+++.+++.+.++||++||...+...            .+
T Consensus       104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~------------~~  171 (277)
T 3gvc_A          104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV------------GG  171 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC------------TT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC------------CC
Confidence            9999999997543211    111111             667777777777899999998764322            23


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce------eeccc-----CccccCCcCHHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI------IMETE-----DTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~------~~~~~-----~~~~~~~i~~~Dva~~i~  260 (296)
                      ...|+.+|++.+.+.+       ..|+++++|+||.+.++......      .....     ......+.+++|+|++++
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~  251 (277)
T 3gvc_A          172 TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVV  251 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHH
Confidence            5679999999998765       36899999999999986321100      00000     011134789999999999


Q ss_pred             HHhcCCC--CCCCeEEEEe
Q 022495          261 EALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~  277 (296)
                      .++....  ..|+++++.+
T Consensus       252 ~L~s~~a~~itG~~i~vdG  270 (277)
T 3gvc_A          252 FLLSDDASMITGTTQIADG  270 (277)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHcCCccCCccCcEEEECC
Confidence            8886543  3566777755

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.93  E-value=9.4e-25  Score=185.71  Aligned_cols=202  Identities=14%  Similarity=0.070  Sum_probs=143.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc-------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG-------D  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~  134 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++       +
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS-EKDVQTALALAKGKFGR   86 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHCCC
Confidence            45678999999999999999999999999999999999876554332123578999999999 888887775       5


Q ss_pred             CCCEEEEcCCCCCCCCCc----------chhHH-------------HHHHHHHHHc------CCCEEEEEccceeccCcc
Q 022495          135 DSEAVVCATGFQPGWDLF----------APWKA-------------INLVEACRKR------GVNRFILISSILVNGAAM  185 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----------~~~~~-------------~~~l~~~~~~------~~~~iV~~SS~~~~~~~~  185 (296)
                       +|+||||||........          ..+..             +.+++.+++.      +.++||++||..++... 
T Consensus        87 -id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-  164 (265)
T 2o23_A           87 -VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-  164 (265)
T ss_dssp             -CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-
T ss_pred             -CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-
Confidence             99999999975432111          11111             4444444444      56799999998765322 


Q ss_pred             CccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--ee---cccCccccCCcCHH
Q 022495          186 GQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--IM---ETEDTLYEGTISRD  253 (296)
Q Consensus       186 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--~~---~~~~~~~~~~i~~~  253 (296)
                                 .+...|+.+|++.+.+.+       ..++++++|+||++.++......  ..   .........+.+++
T Consensus       165 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (265)
T 2o23_A          165 -----------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPA  233 (265)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHH
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHH
Confidence                       235679999999987764       25899999999999887533210  00   00011113468999


Q ss_pred             HHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          254 QVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       254 Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      |+|++++.++..+...++++.+.+
T Consensus       234 dva~~~~~l~~~~~~~G~~i~vdg  257 (265)
T 2o23_A          234 EYAHLVQAIIENPFLNGEVIRLDG  257 (265)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHHHHHHhhcCccCceEEEECC
Confidence            999999999987666778887765

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.93  E-value=2.2e-25  Score=188.09  Aligned_cols=202  Identities=13%  Similarity=0.129  Sum_probs=144.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|+++...+....  ...++.++.+|++| .+++.++++.      
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999999999999997655432210  12578999999999 7877766642      


Q ss_pred             CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCC-CEEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGV-NRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      ++|+||||||.......    ...+..             +.+++.+++.+. ++||++||..++...            
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------  149 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD------------  149 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC------------
Confidence            39999999997542211    111111             567777877776 799999999766432            


Q ss_pred             hhhHHHHHHHHHHHHHHH---------HhCCcEEEEecCcccCCCCCCc---eeec-c-cCccccCCcCHHHHHHHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGN---IIME-T-EDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~---------~~~~~~~~lrp~~i~g~~~~~~---~~~~-~-~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      .+...|+.+|++.+.+.+         ..++++++|+||+++++.....   .... . .......+++++|+|++++.+
T Consensus       150 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  229 (251)
T 1zk4_A          150 PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYL  229 (251)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence            225679999999997764         3589999999999998642211   0000 0 011113478999999999998


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +..+.  ..++.+++.+
T Consensus       230 ~~~~~~~~~G~~~~v~g  246 (251)
T 1zk4_A          230 ASNESKFATGSEFVVDG  246 (251)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             cCcccccccCcEEEECC
Confidence            87543  3567777765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.93  E-value=5.9e-25  Score=187.80  Aligned_cols=195  Identities=17%  Similarity=0.137  Sum_probs=134.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.      ++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTD-PDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence            3568999999999999999999999999999999999877665433223678999999999 8877776651      39


Q ss_pred             CEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcC--CCEEEEEccceeccCccCccCChhhhhh
Q 022495          137 EAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       137 d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      |+||||||.......     .+.+..             +.+++.+++.+  .++||++||...+...            
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------------  171 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR------------  171 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC------------
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC------------
Confidence            999999997533111     111111             66777777765  4799999998765322            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee---cccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---ETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~---~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      .+...|+.+|++++.+.+       ..++++++|+||.+.++........   .........+.+++|+|++++.++..+
T Consensus       172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~  251 (272)
T 4dyv_A          172 PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLP  251 (272)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHHHHSC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCC
Confidence            235679999999998765       2589999999999998753321100   000111234789999999999999877


Q ss_pred             CCCC
Q 022495          267 ESSY  270 (296)
Q Consensus       267 ~~~~  270 (296)
                      ....
T Consensus       252 ~~~~  255 (272)
T 4dyv_A          252 LDAN  255 (272)
T ss_dssp             TTSC
T ss_pred             CcCc
Confidence            6544

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.93  E-value=1.4e-24  Score=185.74  Aligned_cols=202  Identities=16%  Similarity=0.115  Sum_probs=140.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHh------
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAI------  132 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~------  132 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|++++..+..   .....++.++.+|++| .+.+.+++      
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999986654322   1124578999999999 88777666      


Q ss_pred             --cCCCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          133 --GDDSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       133 --~~~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                        .+ +|+||||||.......    .+.+..             +.+++.+++.+.++||++||..++...         
T Consensus        96 ~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------  165 (273)
T 1ae1_A           96 FDGK-LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL---------  165 (273)
T ss_dssp             TTSC-CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC---------
T ss_pred             cCCC-CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC---------
Confidence              45 9999999997532211    111111             556666677777899999999876532         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-c---------CccccCCcCHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-E---------DTLYEGTISRDQVA  256 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-~---------~~~~~~~i~~~Dva  256 (296)
                         .+...|+.+|++.+.+.+       ..|+++++|+||.++++.........+ .         ......+.+++|+|
T Consensus       166 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  242 (273)
T 1ae1_A          166 ---PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVS  242 (273)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHH
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHH
Confidence               225679999999998765       248999999999999975332111000 0         00112367999999


Q ss_pred             HHHHHHhcCCC--CCCCeEEEEe
Q 022495          257 EVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       257 ~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++++.++....  ..|+++++.+
T Consensus       243 ~~v~~l~s~~~~~~tG~~i~vdG  265 (273)
T 1ae1_A          243 ALIAFLCFPAASYITGQIIWADG  265 (273)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCccccCcCCCEEEECC
Confidence            99998886432  3566777655

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.93  E-value=1e-24  Score=187.24  Aligned_cols=203  Identities=19%  Similarity=0.162  Sum_probs=141.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhc---cc-CCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LS-KDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~---~~-~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      .++++|++|||||+|+||+++++.|+++|++|++++|+ .+...+.   +. ....++.++.+|++| .+++.++++.  
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~   99 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK-PSEIADMMAMVA   99 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC-HHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC-HHHHHHHHHHHH
Confidence            35678999999999999999999999999999999994 3333221   11 124678999999999 8877776652  


Q ss_pred             ----CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 ----DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                          ++|+||||||........    +.+..             +.+++.+++.+.++||++||...+...         
T Consensus       100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  170 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS---------  170 (281)
T ss_dssp             HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC---------
Confidence                399999999975432211    11111             566666777777899999998765322         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----------------cccCccccCCc
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----------------ETEDTLYEGTI  250 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----------------~~~~~~~~~~i  250 (296)
                         .....|+.+|++.+.+.+       ..|+++++|+||.+.++........                .........+.
T Consensus       171 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  247 (281)
T 3v2h_A          171 ---PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFI  247 (281)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCB
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCcc
Confidence               224679999999998764       2589999999999998753321100                00011123478


Q ss_pred             CHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          251 SRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       251 ~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++|+|++++.++....  ..|+++++.+
T Consensus       248 ~~edvA~~v~~L~s~~a~~itG~~i~vdG  276 (281)
T 3v2h_A          248 TVEQVASLALYLAGDDAAQITGTHVSMDG  276 (281)
T ss_dssp             CHHHHHHHHHHHHSSGGGGCCSCEEEEST
T ss_pred             CHHHHHHHHHHHcCCCcCCCCCcEEEECC
Confidence            99999999998887543  3567777755

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.93  E-value=1.1e-24  Score=187.93  Aligned_cols=214  Identities=14%  Similarity=0.083  Sum_probs=151.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~v  139 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.  ++|+|
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~iD~l   90 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQD-LSSVRRFADGVSGADVL   90 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTC-HHHHHHHHHTCCCEEEE
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCC-HHHHHHHHHhcCCCCEE
Confidence            46789999999999999999999999999999999999887766554345679999999999 8999988874  48999


Q ss_pred             EEcCCCCCCCC------CcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccC-ccCChhhhhhhhhHHHHHHHH
Q 022495          140 VCATGFQPGWD------LFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMG-QILNPAYIFLNVFGLTLIAKL  207 (296)
Q Consensus       140 v~~ag~~~~~~------~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~-~~~~~~~~~~~~~~~y~~sK~  207 (296)
                      |||||+.....      ......+     .++++++.....++||++||...+..... ........+..+...|+.+|+
T Consensus        91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  170 (291)
T 3rd5_A           91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKL  170 (291)
T ss_dssp             EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred             EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHH
Confidence            99999753211      1111111     77778777776679999999987643221 111111223556788999999


Q ss_pred             HHHHHHH-------HhC--CcEEEEecCcccCCCCCCcee--ecccCccc--cCCcCHHHHHHHHHHHhcCCCCCCCeEE
Q 022495          208 QAEQYIR-------KSG--INYTIIRPGGLRNEPPTGNII--METEDTLY--EGTISRDQVAEVAVEALLHPESSYKVVE  274 (296)
Q Consensus       208 ~~e~~~~-------~~~--~~~~~lrp~~i~g~~~~~~~~--~~~~~~~~--~~~i~~~Dva~~i~~~l~~~~~~~~~~~  274 (296)
                      +.+.+.+       ..+  +++++|+||.+.++.......  ........  ....+++|+|+.++.++..+...|+.+.
T Consensus       171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~~  250 (291)
T 3rd5_A          171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDSFVG  250 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHSCCCTTCEEE
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCCCCCCceeC
Confidence            9997764       235  999999999999876433210  00000011  1123589999999999988766777776


Q ss_pred             EE
Q 022495          275 II  276 (296)
Q Consensus       275 i~  276 (296)
                      +.
T Consensus       251 vd  252 (291)
T 3rd5_A          251 PR  252 (291)
T ss_dssp             ET
T ss_pred             Cc
Confidence            64

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=5.6e-25  Score=186.37  Aligned_cols=199  Identities=13%  Similarity=0.104  Sum_probs=139.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++ .+..... .. .++.+|++| .+++.++++.      ++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-~~-~~~~~D~~~-~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-GG-AFFQVDLED-ERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-TC-EEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-hC-CEEEeeCCC-HHHHHHHHHHHHHHcCCC
Confidence            3568999999999999999999999999999999999876 4322111 14 889999999 7777766542      39


Q ss_pred             CEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||||.......    .+.+..             +.+++.+++.+.++||++||...+...            .+.
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~  146 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE------------QEN  146 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC------------TTB
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC------------CCC
Confidence            999999997543211    111111             555667777777899999998754321            225


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC---------ceeec-ccCccccCCcCHHHHHHHHHHH
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG---------NIIME-TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~---------~~~~~-~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      ..|+.+|++.+.+.+       ..++++++|+||.+.++....         ..... ........+.+++|+|++++.+
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l  226 (256)
T 2d1y_A          147 AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFL  226 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            679999999998765       258999999999998763211         00000 0001113478999999999998


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +..+.  ..++++++.+
T Consensus       227 ~s~~~~~~~G~~~~v~g  243 (256)
T 2d1y_A          227 ASEKASFITGAILPVDG  243 (256)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCchhcCCCCCEEEECC
Confidence            87642  3567777765

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.93  E-value=1.2e-24  Score=181.76  Aligned_cols=182  Identities=17%  Similarity=0.200  Sum_probs=128.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      ++|+|+||||+|+||++++++|+++|++|++++|++++..+.... ..++.++.+|++| .+++.++++.      ++|+
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAE-LEGALPLPGDVRE-EGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-STTCEEEECCTTC-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-hhhceEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            467999999999999999999999999999999998765543321 1378999999999 7777766541      3999


Q ss_pred             EEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ||||||........    ..+..             +.+++.+++.+.++||++||..++...            .+...
T Consensus        82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~  149 (234)
T 2ehd_A           82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF------------KGGAA  149 (234)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC------------TTCHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC------------CCCch
Confidence            99999975432111    11110             577888888888899999998765421            23567


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      |+.+|++.+.+.+       ..++++++|+||++.++.....   .  .. + .+++++|+|++++.++..+.
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~--~~-~-~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          150 YNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT---P--GQ-A-WKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------CCHHHHHHHHHHHHHSCC
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc---c--cc-c-CCCCHHHHHHHHHHHhCCCc
Confidence            9999999887664       2589999999999988653321   0  01 1 16899999999999998754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.93  E-value=3.6e-24  Score=183.59  Aligned_cols=207  Identities=17%  Similarity=0.130  Sum_probs=145.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC------------cchhhhc---ccCCCCCeEEEEcccCCChH
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD------------LDKAKTT---LSKDNPSLQIVKADVTEGSA  126 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~------------~~~~~~~---~~~~~~~~~~~~~D~~d~~~  126 (296)
                      .++++|++|||||+|+||+++++.|+++|++|++++|+            .+...+.   +.....++.++.+|++| .+
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~   87 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD-RE   87 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC-HH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC-HH
Confidence            45779999999999999999999999999999999987            2222211   11124679999999999 88


Q ss_pred             HHHHHhcC------CCCEEEEcCCCCCCCCCcchhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccC
Q 022495          127 KLSEAIGD------DSEAVVCATGFQPGWDLFAPWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMG  186 (296)
Q Consensus       127 ~~~~~~~~------~~d~vv~~ag~~~~~~~~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~  186 (296)
                      ++.++++.      ++|+||||||+.......+.+..             +.+++.+++.+ .++||++||...+.....
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  167 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS  167 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc
Confidence            87776651      49999999997643322222211             66666676654 579999999876532211


Q ss_pred             ccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee--------------cccCcc
Q 022495          187 QILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--------------ETEDTL  245 (296)
Q Consensus       187 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~--------------~~~~~~  245 (296)
                              +..+...|+.+|++.+.+.+       ..++++++|+||.+.++........              ......
T Consensus       168 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (278)
T 3sx2_A          168 --------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAM  239 (278)
T ss_dssp             --------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSS
T ss_pred             --------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhc
Confidence                    12346789999999998765       2589999999999999865432100              001111


Q ss_pred             ccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          246 YEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       246 ~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ...+.+++|+|++++.++....  ..|+++++.+
T Consensus       240 p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  273 (278)
T 3sx2_A          240 PVEVLAPEDVANAVAWLVSDQARYITGVTLPVDA  273 (278)
T ss_dssp             SCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CcCcCCHHHHHHHHHHHhCcccccccCCEEeECC
Confidence            1357899999999998886532  4566777655

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.93  E-value=2.1e-25  Score=188.63  Aligned_cols=201  Identities=16%  Similarity=0.138  Sum_probs=126.1

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+++++|++|||||+|+||++++++|+++|++|++++|+.++..+...   ....++.++.+|++| .+++.++++.   
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~   82 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD-PESAKAMADRTLA   82 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999876554321   134678999999999 8877776651   


Q ss_pred             ---CCCEEEEcCCCCCCC------C-CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          135 ---DSEAVVCATGFQPGW------D-LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~------~-~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                         ++|+||||||.....      + ..+.+..             +.+++.+++.+.++||++||...|.         
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  153 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL---------  153 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC---------
Confidence               399999999973210      0 1111111             6777888887778999999997652         


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH----H---hCCcEEEEecCcccCCCCCCceee----cc-cCccccCCcCHHHHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR----K---SGINYTIIRPGGLRNEPPTGNIIM----ET-EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~----~---~~~~~~~lrp~~i~g~~~~~~~~~----~~-~~~~~~~~i~~~Dva~~i  259 (296)
                            +...|+.+|++.+.+.+    +   .++++++|+||.++++........    .. .......+.+++|+|+++
T Consensus       154 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  227 (253)
T 3qiv_A          154 ------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMC  227 (253)
T ss_dssp             ------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHHHH
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence                  23459999999998765    2   489999999999998753321100    00 001112356789999999


Q ss_pred             HHHhcCCC--CCCCeEEEEe
Q 022495          260 VEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~  277 (296)
                      +.++....  ..|+++++.+
T Consensus       228 ~~l~s~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDG  247 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC--
T ss_pred             HHHcCccccCCCCCEEEECC
Confidence            98886543  3577888766

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.93  E-value=6e-25  Score=187.32  Aligned_cols=206  Identities=16%  Similarity=0.178  Sum_probs=143.1

Q ss_pred             hhhccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           59 EENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        59 ~~~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      ++..++++|++|||||+|+||+++++.|+++|++|++++|++++..+...    ....++.++.+|++| .+++.++++.
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~   92 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEA   92 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHH
Confidence            34456789999999999999999999999999999999999766543221    113568899999999 8877766641


Q ss_pred             ------CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccce-eccCccCccCC
Q 022495          135 ------DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSIL-VNGAAMGQILN  190 (296)
Q Consensus       135 ------~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~-~~~~~~~~~~~  190 (296)
                            ++|+||||||+.......    ..+..             +.+++.|++.+.++||++||.. .+..       
T Consensus        93 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------  165 (267)
T 1vl8_A           93 VKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT-------  165 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC-------
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC-------
Confidence                  399999999975432111    11111             5556667777778999999986 3221       


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce----eecc--cCccccCCcCHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI----IMET--EDTLYEGTISRDQVAE  257 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~----~~~~--~~~~~~~~i~~~Dva~  257 (296)
                           ..+...|+.+|++++.+.+.       .|+++++|+||++.++......    ....  .......+.+++|+|+
T Consensus       166 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~  240 (267)
T 1vl8_A          166 -----MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKG  240 (267)
T ss_dssp             -----SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHH
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHH
Confidence                 12256799999999987752       5899999999999987532210    0000  0011134789999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEe
Q 022495          258 VAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++.++....  ..|+++.+.+
T Consensus       241 ~v~~l~s~~~~~itG~~i~vdG  262 (267)
T 1vl8_A          241 VAVFLASEEAKYVTGQIIFVDG  262 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHcCccccCCcCCeEEECC
Confidence            9999887532  3566666654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.93  E-value=4.9e-25  Score=186.81  Aligned_cols=199  Identities=16%  Similarity=0.092  Sum_probs=140.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc------CC
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DD  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------~~  135 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.+...+.+   ..++.++.+|++| .+++.++++      . 
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~-~~~v~~~~~~~~~~g~-   79 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL---GDRARFAAADVTD-EAAVASALDLAETMGT-   79 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT---CTTEEEEECCTTC-HHHHHHHHHHHHHHSC-
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc---CCceEEEECCCCC-HHHHHHHHHHHHHhCC-
Confidence            5677899999999999999999999999999999999766554433   3679999999999 888777665      5 


Q ss_pred             CCEEEEcCCCCCCC--------CCcchhHH-------------HHHHHHHHH--------cCCCEEEEEccceeccCccC
Q 022495          136 SEAVVCATGFQPGW--------DLFAPWKA-------------INLVEACRK--------RGVNRFILISSILVNGAAMG  186 (296)
Q Consensus       136 ~d~vv~~ag~~~~~--------~~~~~~~~-------------~~~l~~~~~--------~~~~~iV~~SS~~~~~~~~~  186 (296)
                      +|+||||||.....        ...+.+..             +.+++.+++        .+.++||++||...+..   
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  156 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG---  156 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC---
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC---
Confidence            99999999964210        11111111             555555555        34569999999876532   


Q ss_pred             ccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-----ecccCccccCCcCHHH
Q 022495          187 QILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQ  254 (296)
Q Consensus       187 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-----~~~~~~~~~~~i~~~D  254 (296)
                               ......|+.+|++.+.+.+       ..++++++|+||.+.++.......     ..........+.+++|
T Consensus       157 ---------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~d  227 (257)
T 3tl3_A          157 ---------QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDE  227 (257)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHH
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHH
Confidence                     2346789999999987764       358999999999999876432110     0001111134789999


Q ss_pred             HHHHHHHHhcCCCCCCCeEEEEe
Q 022495          255 VAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       255 va~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      +|++++.++.++...|+++++.+
T Consensus       228 va~~v~~l~s~~~itG~~i~vdG  250 (257)
T 3tl3_A          228 YGALAVHIIENPMLNGEVIRLDG  250 (257)
T ss_dssp             HHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHHHHHhcCCCCCCCEEEECC
Confidence            99999999988666788887765

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.93  E-value=8.1e-26  Score=190.03  Aligned_cols=201  Identities=15%  Similarity=0.128  Sum_probs=143.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      |++++|+++||||+++||+++++.|+++|++|++.+|+++...+..   .....++.++.+|++| .++++++++.    
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~   83 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTD-ELAIEAAFSKLDAE   83 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC-HHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHH
Confidence            6889999999999999999999999999999999999987655432   2245688999999999 7777766543    


Q ss_pred             --CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHc-CCCEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKR-GVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|++|||||+.......+    .+..             +.+++.|.+. +.++||++||...+...          
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~----------  153 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR----------  153 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC----------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC----------
Confidence              5999999999765432211    1211             7888888654 45799999999754322          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-----cCc-cccCCcCHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----EDT-LYEGTISRDQVAEVAVE  261 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-----~~~-~~~~~i~~~Dva~~i~~  261 (296)
                        .....|+.+|.++..+.+       .+||+++.|.||.+.++.......-..     ... ....+..++|+|.+++.
T Consensus       154 --~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~f  231 (255)
T 4g81_D          154 --PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIF  231 (255)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHH
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence              124679999999987765       469999999999999875321110000     000 11236789999999887


Q ss_pred             HhcCCC--CCCCeEEE
Q 022495          262 ALLHPE--SSYKVVEI  275 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i  275 (296)
                      ++.+..  ..|+++.+
T Consensus       232 L~S~~a~~iTG~~i~V  247 (255)
T 4g81_D          232 LSSKASDYINGQIIYV  247 (255)
T ss_dssp             HHSGGGTTCCSCEEEE
T ss_pred             HhCchhCCCcCCEEEE
Confidence            774322  24444444

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=2.3e-24  Score=184.93  Aligned_cols=203  Identities=18%  Similarity=0.151  Sum_probs=143.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-------------cchhhh---cccCCCCCeEEEEcccCCCh
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-------------LDKAKT---TLSKDNPSLQIVKADVTEGS  125 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-------------~~~~~~---~~~~~~~~~~~~~~D~~d~~  125 (296)
                      .++++|+++||||+|+||++++++|+++|++|++++|+             .++..+   .+.....++.++.+|++| .
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~   89 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD-D   89 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC-H
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC-H
Confidence            35678999999999999999999999999999999983             333222   122245678999999999 8


Q ss_pred             HHHHHHhcC------CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcC-CCEEEEEccceec
Q 022495          126 AKLSEAIGD------DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRG-VNRFILISSILVN  181 (296)
Q Consensus       126 ~~~~~~~~~------~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~  181 (296)
                      +++.++++.      ++|+||||||.......    .+.+..             +.+++.+++.+ .++||++||...+
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL  169 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence            877776642      49999999997543221    111111             66667777765 5799999998765


Q ss_pred             cCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee----------ec---c
Q 022495          182 GAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----------ME---T  241 (296)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~----------~~---~  241 (296)
                      ...            .....|+.+|++.+.+.+       .+|+++++|+||.+.++.......          ..   .
T Consensus       170 ~~~------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  237 (280)
T 3pgx_A          170 KAT------------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP  237 (280)
T ss_dssp             SCC------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC
T ss_pred             cCC------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh
Confidence            432            225679999999998764       268999999999999986443100          00   0


Q ss_pred             cCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          242 EDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       242 ~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      .......+.+++|+|++++.++....  ..|+++++.+
T Consensus       238 ~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  275 (280)
T 3pgx_A          238 MPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDK  275 (280)
T ss_dssp             BTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEEST
T ss_pred             cccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            11111247899999999998886543  3566777654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.93  E-value=4.4e-25  Score=186.59  Aligned_cols=204  Identities=16%  Similarity=0.139  Sum_probs=144.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCe-EEEEcccCCChHHHHHHh------cC
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSL-QIVKADVTEGSAKLSEAI------GD  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~------~~  134 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|++++..+.......++ .++.+|++| .+.+.+++      .+
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   85 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTD-AEAMTAAAAEAEAVAP   85 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC-HHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCC-HHHHHHHHHHHHhhCC
Confidence            35678999999999999999999999999999999999876554321112356 889999999 88887766      45


Q ss_pred             CCCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                       +|+||||||.......    ...+.    .         +.+++.+++.+.++||++||..++.....          .
T Consensus        86 -id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------~  154 (254)
T 2wsb_A           86 -VSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP----------Q  154 (254)
T ss_dssp             -CCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS----------S
T ss_pred             -CcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCC----------C
Confidence             9999999997543211    11111    0         56677777777889999999976643211          1


Q ss_pred             hhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCc-----eeec-ccCccccCCcCHHHHHHHHHHHhc
Q 022495          198 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGN-----IIME-TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~-----~~~~-~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      +...|+.+|++.+.+.+.       .++++++|+||.++++.....     .... ........+.+++|+|++++.++.
T Consensus       155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  234 (254)
T 2wsb_A          155 FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLAS  234 (254)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            236799999999987652       489999999999998642210     0000 000111347899999999999886


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      .+.  ..|+++++.+
T Consensus       235 ~~~~~~~G~~~~v~g  249 (254)
T 2wsb_A          235 PAASYVTGAILAVDG  249 (254)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             cccccccCCEEEECC
Confidence            532  3567777754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.93  E-value=1.4e-24  Score=182.90  Aligned_cols=201  Identities=14%  Similarity=0.148  Sum_probs=141.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhh---cccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++|+++||||+|+||++++++|+++|++|++++|.. +...+   .+.....++.++.+|++| .+++.++++.     
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD-ADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999988854 33322   122234678999999999 8877776652     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||.......    .+.+..             +.+++.+++.+.++||++||...+...            
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------  148 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN------------  148 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC------------
Confidence             39999999997543211    111111             555566677777899999998754321            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee---c-ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---E-TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~---~-~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .+...|+.+|++.+.+.+       ..|+++++|+||.+.++........   . ........+.+++|+|++++.++..
T Consensus       149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~  228 (246)
T 3osu_A          149 PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASD  228 (246)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            235679999999998765       3589999999999998764322100   0 0011123467899999999888865


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      +.  ..|+++++.+
T Consensus       229 ~~~~itG~~i~vdg  242 (246)
T 3osu_A          229 KAKYITGQTIHVNG  242 (246)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             cccCCCCCEEEeCC
Confidence            43  3467777765

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.93  E-value=1.2e-24  Score=184.69  Aligned_cols=201  Identities=19%  Similarity=0.156  Sum_probs=139.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccC---C-CCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSK---D-NPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~---~-~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||+|+||+++++.|+++|++|++++|+++. ..+....   . ..++.++.+|++| .+++.++++.    
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK-GEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999998766 4432210   1 3568899999999 8877776641    


Q ss_pred             --CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||......    ..+.+..             +.+++.+++.+.++||++||...+...           
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  149 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----------  149 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----------
Confidence              3999999999754321    1111111             566777777777899999999765422           


Q ss_pred             hhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee---e------cc-cCc------cccCCcCH
Q 022495          196 LNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII---M------ET-EDT------LYEGTISR  252 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~---~------~~-~~~------~~~~~i~~  252 (296)
                       .+...|+.+|.+.+.+.+.       .++++++|+||++.++.......   .      .. ...      ....+.++
T Consensus       150 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p  228 (260)
T 1x1t_A          150 -ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP  228 (260)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCH
Confidence             2246799999999987752       48999999999999875332110   0      00 000      11346899


Q ss_pred             HHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          253 DQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|+|++++.++..+.  ..|+++++.+
T Consensus       229 ~dva~~~~~l~s~~~~~~tG~~~~vdg  255 (260)
T 1x1t_A          229 EQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            999999998886532  3566776654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.93  E-value=4e-24  Score=183.74  Aligned_cols=205  Identities=18%  Similarity=0.193  Sum_probs=142.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|+.++..+.   +.....++.++.+|++| .+++.++++.    
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD-ELQMRNAVRDLVLK  102 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            355789999999999999999999999999999999998765432   22245678999999999 7777766642    


Q ss_pred             --CCCEEEEcCCCCCCC---CCc--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGW---DLF--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~---~~~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|+||||||+....   ...  +.+..             +.+++.+++.+.++||++||...+...          
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------  172 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF----------  172 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC----------
Confidence              499999999975321   111  11111             666666777777899999998754311          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec----------ccCcc-c--cCCcCHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME----------TEDTL-Y--EGTISRDQ  254 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~----------~~~~~-~--~~~i~~~D  254 (296)
                      +..+...|+.+|++.+.+.+       ..|+++++|+||.+.++.........          ..... .  ..+.+++|
T Consensus       173 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~ped  252 (283)
T 3v8b_A          173 TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSED  252 (283)
T ss_dssp             CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHH
Confidence            11235679999999998775       25899999999999987643321100          00000 1  33578999


Q ss_pred             HHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          255 VAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       255 va~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|++++.++....  ..|+++++.+
T Consensus       253 vA~~v~fL~s~~a~~itG~~i~vdG  277 (283)
T 3v8b_A          253 VAELIRFLVSERARHVTGSPVWIDG  277 (283)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHcCccccCCcCCEEEECc
Confidence            9999988886533  3466666644

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.93  E-value=7.1e-25  Score=184.64  Aligned_cols=201  Identities=16%  Similarity=0.135  Sum_probs=141.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-Ccchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++|+++||||+|+||+++++.|+++|++|++++| ++++..+..   .....++.++.+|++| .+++.++++.     
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN-AEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999 665543321   1124578999999999 8877776651     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||.......    .+.+..             +.+++.|++.+.++||++||...+...            
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------  148 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN------------  148 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC------------
Confidence             39999999997543211    111111             667777877777899999998654321            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .....|+.+|.+.+.+.+       ..++++++|+||.+.++......  ...  ........+.+++|+|++++.++..
T Consensus       149 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~  228 (246)
T 2uvd_A          149 PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASD  228 (246)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            124679999999987754       35899999999999887533210  000  0001113478999999999998865


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      +.  ..++++++.+
T Consensus       229 ~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          229 QSKYITGQTLNVDG  242 (246)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             hhcCCCCCEEEECc
Confidence            32  3466776654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.93  E-value=5.9e-25  Score=183.87  Aligned_cols=185  Identities=17%  Similarity=0.131  Sum_probs=131.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~  138 (296)
                      ++|+++||||+|+||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.      ++|+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAH-HEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTS-HHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHhcCCCcE
Confidence            47899999999999999999999999999999999876654332112368999999999 7877766542      4999


Q ss_pred             EEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          139 VVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       139 vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      ||||||......    ..+.+..             +.+++.+++.+ ++||++||...+...            .....
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~------------~~~~~  147 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGK------------ANESL  147 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSC------------SSHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCC------------CCCcH
Confidence            999999753221    1111111             55666666655 499999998765422            12567


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      |+.+|++.+.+.+       ..|++++.|+||.+.++.......     .....+++++|+|++++.++..+..
T Consensus       148 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          148 YCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----VDPSGFMTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------CBCHHHHHHHHHHHTCCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----CCCcCCCCHHHHHHHHHHHHhCCCC
Confidence            9999999998775       258999999999998875332211     1123578999999999999987654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.93  E-value=5.7e-25  Score=188.03  Aligned_cols=203  Identities=16%  Similarity=0.132  Sum_probs=143.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh--hcccCCCCCeEEEEcccCCChHHHHHHhc-----C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TTLSKDNPSLQIVKADVTEGSAKLSEAIG-----D  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~  134 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|++....  +.+.....++.++.+|++| .+++.++.+     +
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLAD-LEGAANVAEELAATR  105 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHhcC
Confidence            5678999999999999999999999999999999997753211  1222244678999999999 777665543     1


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||+.......    +.+..             +.+++.+++.+.++||++||...+...            .
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~------------~  173 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG------------R  173 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------S
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC------------C
Confidence            499999999976432211    11111             666677777777899999999765432            2


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHHHHhc
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      +...|+.+|++.+.+.+       ..|+++++|+||.+.++.........      ........+.+++|+|++++.++.
T Consensus       174 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s  253 (273)
T 3uf0_A          174 NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLAS  253 (273)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHS
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            25679999999998765       26899999999999986532110000      000111347889999999998887


Q ss_pred             CC--CCCCCeEEEEe
Q 022495          265 HP--ESSYKVVEIIS  277 (296)
Q Consensus       265 ~~--~~~~~~~~i~~  277 (296)
                      ..  ...|+++++.+
T Consensus       254 ~~a~~itG~~i~vdG  268 (273)
T 3uf0_A          254 DAASYVHGQVLAVDG  268 (273)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             chhcCCcCCEEEECc
Confidence            53  24567777755

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.93  E-value=4.5e-25  Score=185.80  Aligned_cols=201  Identities=16%  Similarity=0.137  Sum_probs=143.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC----CCCCeEEEEcccCCChHHHHHHhc-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+....    ...++.++.+|++| .+++.++++     
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS-EESINKAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC-HHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999987655432210    13578999999999 888887775     


Q ss_pred             --CCCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          134 --DDSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       134 --~~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        + +|+||||||.......    ...+..             +.+++.+++.+.++||++||...+...          
T Consensus        83 ~~~-~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  151 (248)
T 2pnf_A           83 VDG-IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN----------  151 (248)
T ss_dssp             SSC-CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC----------
T ss_pred             cCC-CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC----------
Confidence              5 9999999997543211    111111             556677777778899999998653221          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHHHHHHHh
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                        .+...|+.+|.+.+.+.+       ..++++++++||.++++......  ...  ........+++++|+|++++.++
T Consensus       152 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  229 (248)
T 2pnf_A          152 --VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLC  229 (248)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence              124569999999988764       24899999999999987532110  000  00011234789999999999988


Q ss_pred             cCC--CCCCCeEEEEe
Q 022495          264 LHP--ESSYKVVEIIS  277 (296)
Q Consensus       264 ~~~--~~~~~~~~i~~  277 (296)
                      ...  ...++++++.+
T Consensus       230 ~~~~~~~~G~~~~v~g  245 (248)
T 2pnf_A          230 SELASYITGEVIHVNG  245 (248)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CchhhcCCCcEEEeCC
Confidence            753  23577887765

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.93  E-value=4.2e-24  Score=181.58  Aligned_cols=196  Identities=18%  Similarity=0.191  Sum_probs=136.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++..+..   .....++.++.+|++| .+++.++++.     
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH-SDAIAAFATGVLAAH  104 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999999987655432   1234678999999999 7877766542     


Q ss_pred             -CCCEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||.......     ...+..             +.+++.+++.+.++||++||...+...           
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  173 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV-----------  173 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC-----------
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC-----------
Confidence             49999999997321111     111111             666666777777899999998765322           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                       .+...|+.+|++.+.+.+       ..++++++|+||.+.++......    .......+++++|+|++++.++..+..
T Consensus       174 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          174 -ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS----AKKSALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc----cccccccCCCHHHHHHHHHHHhcCccc
Confidence             235679999999998764       25899999999999887533221    111223578999999999988877654


Q ss_pred             CCCeEEEE
Q 022495          269 SYKVVEII  276 (296)
Q Consensus       269 ~~~~~~i~  276 (296)
                       ..+.++.
T Consensus       249 -~~~g~~~  255 (262)
T 3rkr_A          249 -SFISEVL  255 (262)
T ss_dssp             -CCEEEEE
T ss_pred             -cccCcEE
Confidence             3344443

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.93  E-value=8.7e-25  Score=186.12  Aligned_cols=202  Identities=16%  Similarity=0.128  Sum_probs=130.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHh------
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAI------  132 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~------  132 (296)
                      +++++|+|+||||+|+||++++++|+++|++|++++|++++..+...   ....++.++.+|++| .+.+.+++      
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSM   88 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999766543221   124578999999999 88777766      


Q ss_pred             --cCCCCEEEEcCCCCCCCC----CcchhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          133 --GDDSEAVVCATGFQPGWD----LFAPWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       133 --~~~~d~vv~~ag~~~~~~----~~~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                        .+ +|+||||||......    ....+.      .       +.+++.+++.+.++||++||..++...         
T Consensus        89 ~~~~-id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  158 (266)
T 1xq1_A           89 FGGK-LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA---------  158 (266)
T ss_dssp             HTTC-CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred             hCCC-CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC---------
Confidence              45 999999999753221    111111      1       444555567778899999998765421         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee---ecc--cCccccCCcCHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII---MET--EDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~---~~~--~~~~~~~~i~~~Dva~~i~~  261 (296)
                         .+...|+.+|++.+.+.+.       .++++++|+||.++++.......   ...  .......+.+++|+|++++.
T Consensus       159 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (266)
T 1xq1_A          159 ---SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAF  235 (266)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence               2245799999999987752       48999999999999975432210   000  00111246899999999998


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++..+.  ..++++++.+
T Consensus       236 l~~~~~~~~~G~~~~v~g  253 (266)
T 1xq1_A          236 LCMPAASYITGQTICVDG  253 (266)
T ss_dssp             HTSGGGTTCCSCEEECCC
T ss_pred             HcCccccCccCcEEEEcC
Confidence            886532  3466777655

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.93  E-value=6.4e-25  Score=187.06  Aligned_cols=203  Identities=14%  Similarity=0.079  Sum_probs=143.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC----CCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|+.++..+....    ...++.++.+|++| .+++.++++.   
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   94 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE-PDAPAELARRAAE   94 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-TTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998765533211    24679999999999 7776665541   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhh
Q 022495          135 ---DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                         ++|+||||||........    +.+..             +.+++.+++.+ .++||++||...+...         
T Consensus        95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  165 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL---------  165 (266)
T ss_dssp             HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC---------
Confidence               399999999975432211    11111             56667776665 5699999999765422         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-----eec-ccCccccCCcCHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----IME-TEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-----~~~-~~~~~~~~~i~~~Dva~~i~  260 (296)
                         .....|+.+|++.+.+.+       ..|++++.|+||.+.++......     ... ........+.+++|+|++++
T Consensus       166 ---~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~  242 (266)
T 4egf_A          166 ---PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVV  242 (266)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             ---CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence               225679999999998764       25899999999999986421110     000 00111134678999999999


Q ss_pred             HHhcCCC--CCCCeEEEEe
Q 022495          261 EALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~  277 (296)
                      .++....  ..|+++++.+
T Consensus       243 ~L~s~~~~~itG~~i~vdG  261 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDG  261 (266)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhcCccCcEEEECC
Confidence            8887532  3566777654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=2.5e-24  Score=181.16  Aligned_cols=199  Identities=17%  Similarity=0.153  Sum_probs=141.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+.....  ++.++.+|++| .+++.+++++      ++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--GAHPVVMDVAD-PASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--TCEEEECCTTC-HHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence            356899999999999999999999999999999999987765543211  38899999999 7777766542      49


Q ss_pred             CEEEEcCCCCCCCCC----cchhH------H-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL----FAPWK------A-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~------~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||||.......    .+.+.      .       +.+++.+++.+.++||++||...++.             ...
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------------~~~  145 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-------------LGQ  145 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-------------TTC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC-------------CCc
Confidence            999999997543211    11111      1       55566666667789999999873221             124


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--eecc--cCccccCCcCHHHHHHHHHHHhcCCC-
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--IMET--EDTLYEGTISRDQVAEVAVEALLHPE-  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--~~~~--~~~~~~~~i~~~Dva~~i~~~l~~~~-  267 (296)
                      ..|+.+|++.+.+.+       ..|+++++|+||++.++......  ....  .......+.+++|+|++++.++..+. 
T Consensus       146 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~  225 (245)
T 1uls_A          146 ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESS  225 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            579999999987664       35899999999999887543210  0000  00011247899999999999887542 


Q ss_pred             -CCCCeEEEEe
Q 022495          268 -SSYKVVEIIS  277 (296)
Q Consensus       268 -~~~~~~~i~~  277 (296)
                       ..|+.+.+.+
T Consensus       226 ~~tG~~~~vdg  236 (245)
T 1uls_A          226 FITGQVLFVDG  236 (245)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCcCCEEEECC
Confidence             3566766654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.5e-24  Score=185.99  Aligned_cols=203  Identities=14%  Similarity=0.112  Sum_probs=145.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|++|||||+|+||+++++.|+++|++|++++|+.++..+..   .....++.++.+|++| .+.+.++++.     
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGD-EALHEALVELAVRRF   83 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999987655432   2235678999999999 7877766641     


Q ss_pred             -CCCEEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||........     +.+..             +.+++.+++.+.++||++||...+...           
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  152 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG-----------  152 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC-----------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC-----------
Confidence             399999999965321111     11111             666777777777899999998765211           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee--c------ccCccccCCcCHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--E------TEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~--~------~~~~~~~~~i~~~Dva~~i~  260 (296)
                      ..+...|+.+|++.+.+.+       ..|+++++|+||.+.++........  .      ........+.+++|+|++++
T Consensus       153 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  232 (280)
T 3tox_A          153 FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAAL  232 (280)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHH
Confidence            1235679999999998765       2489999999999999754321100  0      00111134689999999999


Q ss_pred             HHhcCCC--CCCCeEEEEe
Q 022495          261 EALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~  277 (296)
                      .++....  ..|+++++.+
T Consensus       233 ~L~s~~a~~itG~~i~vdG  251 (280)
T 3tox_A          233 YLASDGASFVTGAALLADG  251 (280)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCccccCCcCcEEEECC
Confidence            8887543  3567777765

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.93  E-value=2.4e-24  Score=180.99  Aligned_cols=184  Identities=14%  Similarity=0.175  Sum_probs=136.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      +|+|+||||+|+||++++++|+++|+       +|++++|++++.....   .....++.++.+|++| .+.+.++++. 
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC-HHHHHHHHHHH
Confidence            67999999999999999999999999       9999999876654322   1124578999999999 8877776651 


Q ss_pred             -----CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          135 -----DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 -----~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                           ++|+||||||.......    ...+..             +.+++.+++.+.++||++||..++...        
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  152 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF--------  152 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC--------
Confidence                 39999999997543211    111111             555566666677899999999776432        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                          .+...|+.+|++.+.+.+       ..++++++|+||.++++......   ...  ...+++++|+|++++.++..
T Consensus       153 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~--~~~~~~~~dva~~~~~l~~~  223 (244)
T 2bd0_A          153 ----RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD---DEM--QALMMMPEDIAAPVVQAYLQ  223 (244)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC---STT--GGGSBCHHHHHHHHHHHHTS
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc---ccc--cccCCCHHHHHHHHHHHHhC
Confidence                235679999999998764       35899999999999998643311   111  23579999999999999986


Q ss_pred             CC
Q 022495          266 PE  267 (296)
Q Consensus       266 ~~  267 (296)
                      +.
T Consensus       224 ~~  225 (244)
T 2bd0_A          224 PS  225 (244)
T ss_dssp             CT
T ss_pred             Cc
Confidence            54

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=6e-25  Score=190.12  Aligned_cols=210  Identities=16%  Similarity=0.148  Sum_probs=146.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCC---CeEEEEcccCCChHHHHHHhcC--
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNP---SLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~---~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++..+...   ....   ++.++.+|++| .+++.++++.  
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~  101 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTL  101 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC-HHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999876543221   1122   68999999999 8877766641  


Q ss_pred             ----CCCEEEEcCCCCCCCC--Cc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          135 ----DSEAVVCATGFQPGWD--LF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~--~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                          ++|+||||||......  ..    +.+..             +.+++.+++.+ ++||++||...+....      
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~------  174 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH------  174 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC------
T ss_pred             HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCC------
Confidence                3999999999754321  11    11110             66677777767 8999999987654220      


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-----------eec-ccC-ccccCCcC
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----------IME-TED-TLYEGTIS  251 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-----------~~~-~~~-~~~~~~i~  251 (296)
                           .+...|+.+|++.+.+.+       ..|+++++|+||.+.++......           ... ... .....+.+
T Consensus       175 -----~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  249 (297)
T 1xhl_A          175 -----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGK  249 (297)
T ss_dssp             -----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBC
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcC
Confidence                 224679999999998764       36899999999999987422110           000 000 11134689


Q ss_pred             HHHHHHHHHHHhcCC---CCCCCeEEEEeCCCCCCCCHHH
Q 022495          252 RDQVAEVAVEALLHP---ESSYKVVEIISRVDAPKRSYED  288 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~---~~~~~~~~i~~~~~~~~~~~~e  288 (296)
                      ++|+|++++.++..+   ...|+++++.+   |....+.+
T Consensus       250 pedvA~~v~~l~s~~~~~~itG~~i~vdG---G~~~~~~~  286 (297)
T 1xhl_A          250 PEEIANIIVFLADRNLSSYIIGQSIVADG---GSTLVMGM  286 (297)
T ss_dssp             HHHHHHHHHHHHCHHHHTTCCSCEEEEST---TGGGCCGG
T ss_pred             HHHHHHHHHHHhCCcccCCccCcEEEECC---Cccccccc
Confidence            999999999988654   34567777765   55555444

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.92  E-value=7.3e-25  Score=187.67  Aligned_cols=203  Identities=19%  Similarity=0.166  Sum_probs=143.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|++++..+....  ...++.++.+|++| .+++.++++.     
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSS-EAGARRLAQALGELS  103 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTS-HHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCC-HHHHHHHHHHHHHhc
Confidence            456789999999999999999999999999999999997665432210  11278899999999 8877776641     


Q ss_pred             -CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCC----CEEEEEccceeccCccCccCChh
Q 022495          135 -DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGV----NRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~----~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                       ++|+||||||......    ..+.+..             +.+++.+++.+.    ++||++||..++....+      
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~------  177 (276)
T 2b4q_A          104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE------  177 (276)
T ss_dssp             SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC------
Confidence             3999999999654321    1111111             666777776665    79999999976643211      


Q ss_pred             hhhhhhhH-HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-e-cc--c--CccccCCcCHHHHHHH
Q 022495          193 YIFLNVFG-LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-M-ET--E--DTLYEGTISRDQVAEV  258 (296)
Q Consensus       193 ~~~~~~~~-~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-~-~~--~--~~~~~~~i~~~Dva~~  258 (296)
                            .. .|+.+|++.+.+.+       ..++++++|+||.+.++....... . ..  .  ......+.+++|+|++
T Consensus       178 ------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  251 (276)
T 2b4q_A          178 ------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAAL  251 (276)
T ss_dssp             ------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHH
T ss_pred             ------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHH
Confidence                  23 69999999998765       258999999999999875332100 0 00  0  1111347899999999


Q ss_pred             HHHHhcCCC--CCCCeEEEEe
Q 022495          259 AVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++.++..+.  ..|+++.+.+
T Consensus       252 v~~l~s~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          252 AISLAGTAGAYMTGNVIPIDG  272 (276)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCccccCCCCCEEEeCC
Confidence            999887542  3566776654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.92  E-value=6e-24  Score=185.90  Aligned_cols=192  Identities=18%  Similarity=0.205  Sum_probs=129.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-----hhhh---cccCCCCCeEEEEcccCCChHHHHHHhc-
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-----KAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIG-  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~-  133 (296)
                      ++++|++|||||+||||+++++.|+++|++|++++|+..     +..+   .......++.++.+|++| .+++.++++ 
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~   80 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS-QVSVDRAIDQ   80 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHH
Confidence            346789999999999999999999999999999998742     1111   111124679999999999 888877765 


Q ss_pred             ------CCCCEEEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCC
Q 022495          134 ------DDSEAVVCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       134 ------~~~d~vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                            + +|+||||||+.......    +.+.    .         +.+++.+++.+.++||++||...+....     
T Consensus        81 ~~~~~g~-iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~-----  154 (324)
T 3u9l_A           81 IIGEDGR-IDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP-----  154 (324)
T ss_dssp             HHHHHSC-CSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC-----
T ss_pred             HHHHcCC-CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC-----
Confidence                  5 99999999975322111    1111    1         5566666888888999999997653221     


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-c------------ccC-------
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-E------------TED-------  243 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-~------------~~~-------  243 (296)
                            ...+.|+++|++++.+.+       ..|+++++|+||.+.++........ .            +..       
T Consensus       155 ------~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (324)
T 3u9l_A          155 ------PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIK  228 (324)
T ss_dssp             ------SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHH
T ss_pred             ------CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHH
Confidence                  124679999999998764       2589999999999986532110000 0            000       


Q ss_pred             ----ccccCCcCHHHHHHHHHHHhcCCC
Q 022495          244 ----TLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       244 ----~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                          .......+++|+|++++.++..+.
T Consensus       229 ~~~~~l~~~~~~p~~vA~aiv~~~~~~~  256 (324)
T 3u9l_A          229 KAFAAIVPPDADVSLVADAIVRVVGTAS  256 (324)
T ss_dssp             HHHHHTSCTTCCTHHHHHHHHHHHTSCT
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHhcCCC
Confidence                000123688999999999998875

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=6.5e-25  Score=184.90  Aligned_cols=200  Identities=15%  Similarity=0.114  Sum_probs=142.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHh---cCCCCEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI---GDDSEAV  139 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~~~d~v  139 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++..+..  ...++.++.+|++| .+++.+++   ++ +|+|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~D~~~-~~~~~~~~~~~~~-id~l   78 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE--KYPGIQTRVLDVTK-KKQIDQFANEVER-LDVL   78 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG--GSTTEEEEECCTTC-HHHHHHHHHHCSC-CSEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--hccCceEEEeeCCC-HHHHHHHHHHhCC-CCEE
Confidence            356899999999999999999999999999999999987765543  12378999999999 88877654   45 9999


Q ss_pred             EEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          140 VCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       140 v~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |||||.......    ...+..             +.+++.+++.+.++||++||...+....           .+...|
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~~Y  147 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV-----------VNRCVY  147 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC-----------TTBHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC-----------CCCccH
Confidence            999997543211    111111             5566666677778999999987653221           124679


Q ss_pred             HHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee--------ec-c-cCccccCCcCHHHHHHHHHHHhcC
Q 022495          203 LIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII--------ME-T-EDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       203 ~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~--------~~-~-~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      +.+|++.+.+.+.       .++++++|+||+++++.......        .. . .......+.+++|+|++++.++..
T Consensus       148 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~  227 (246)
T 2ag5_A          148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASD  227 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            9999999987753       48999999999999864221000        00 0 000112467899999999998865


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      +.  ..|+++.+.+
T Consensus       228 ~~~~~tG~~i~vdg  241 (246)
T 2ag5_A          228 ESAYVTGNPVIIDG  241 (246)
T ss_dssp             GGTTCCSCEEEECT
T ss_pred             cccCCCCCEEEECC
Confidence            43  3566777654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.3e-24  Score=185.68  Aligned_cols=187  Identities=14%  Similarity=0.133  Sum_probs=139.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|+|+||||+|+||+++++.|+++|++|++++|+++...+..   .....++.++.+|++| .+.+.++++.    
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC-HHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999976654322   1124578999999999 8877766641    


Q ss_pred             --CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||.........    .+..             +.+++.+++.+.++||++||..++..            
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------  173 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS------------  173 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC------------
T ss_pred             CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC------------
Confidence              3999999999754322111    1100             56777777778889999999976542            


Q ss_pred             hhhhHHHHHHHHHHHHHHH----H------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          196 LNVFGLTLIAKLQAEQYIR----K------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~----~------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ..+...|+.+|++.+.+++    +      .++++++|+||++.++.....      ......+++++|+|++++.++..
T Consensus       174 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~~~~dva~~i~~~~~~  247 (272)
T 1yb1_A          174 VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP------STSLGPTLEPEEVVNRLMHGILT  247 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT------HHHHCCCCCHHHHHHHHHHHHHT
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc------cccccCCCCHHHHHHHHHHHHHc
Confidence            2346779999999997764    2      279999999999988763211      11123578999999999999986


Q ss_pred             CC
Q 022495          266 PE  267 (296)
Q Consensus       266 ~~  267 (296)
                      +.
T Consensus       248 ~~  249 (272)
T 1yb1_A          248 EQ  249 (272)
T ss_dssp             TC
T ss_pred             CC
Confidence            53

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.92  E-value=1.7e-24  Score=186.83  Aligned_cols=204  Identities=16%  Similarity=0.148  Sum_probs=142.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCC-CCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDN-PSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~-~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|+.++..+..   .... .++.++.+|++| .+++.++++.   
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~  115 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD-PGSCADAARTVVD  115 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC-HHHHHHHHHHHHH
Confidence            4678899999999999999999999999999999999987655432   1122 578999999999 7776665542   


Q ss_pred             ---CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         ++|+||||||.......    .+.+..             +.+++.+++.+.++||++||...+..           
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~-----------  184 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT-----------  184 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB-----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC-----------
Confidence               39999999997543221    111111             55556667777789999999864311           


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc---eeec-ccCccccCCcCHHHHHHHHHHHh
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN---IIME-TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~---~~~~-~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      +......|+.+|++.+.+.+       ..|+++++|+||.++++.....   .... ........+..++|+|++++.++
T Consensus       185 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~  264 (293)
T 3rih_A          185 GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLA  264 (293)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            11235679999999998765       2589999999999998632111   0000 00111123678999999998888


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..|+++++.+
T Consensus       265 s~~a~~itG~~i~vdG  280 (293)
T 3rih_A          265 TDEAGYITGQAIVVDG  280 (293)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CccccCCCCCEEEECC
Confidence            6432  3567777755

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.92  E-value=9e-25  Score=184.99  Aligned_cols=210  Identities=14%  Similarity=0.122  Sum_probs=146.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+.......++.++.+|++| .+++.++++.      ++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIAD-LNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSSE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999999877665433223578999999999 7777655431      39


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          137 EAVVCATGFQPGWDLF----APWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      |+||||||........    +.+..         .++++++...  ..++||++||...+...            .+...
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~  151 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH------------PGMSV  151 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC------------TTBHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC------------CCchH
Confidence            9999999975432211    11111         4455555432  13599999999765432            23567


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec----------ccCccccCCcCHHHHHHHHHHHhc
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME----------TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~----------~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      |+.+|++.+.+.+       ..|++++.|+||.+.++.........          ........+.+++|+|++++.++.
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  231 (255)
T 4eso_A          152 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999998765       25899999999999987533210000          000111346789999999998876


Q ss_pred             C-CCCCCCeEEEEeCCCCCCCCHHH
Q 022495          265 H-PESSYKVVEIISRVDAPKRSYED  288 (296)
Q Consensus       265 ~-~~~~~~~~~i~~~~~~~~~~~~e  288 (296)
                      . ....|+++++.+   |...++.+
T Consensus       232 ~~~~itG~~i~vdG---G~~~~l~~  253 (255)
T 4eso_A          232 EATFTTGAKLAVDG---GLGQKLST  253 (255)
T ss_dssp             TCTTCCSCEEEEST---TTTTTBCC
T ss_pred             cCcCccCCEEEECC---CccccCcC
Confidence            5 223566676655   66665544

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.92  E-value=1.1e-24  Score=185.85  Aligned_cols=202  Identities=14%  Similarity=0.101  Sum_probs=143.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|++|||||+|+||+++++.|+++|++|++++|+.+...+..   .....++.++.+|++| .+++.++++.     
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND-ATAVDALVESTLKEF  103 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC-HHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999987654322   1124578999999999 7777766651     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||+......    .+.+..             +.+++.+++.+.++||++||...+..            .
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------~  171 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG------------N  171 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC------------C
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC------------C
Confidence             39999999997543211    111111             56666666667789999999875432            2


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---e-ecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---I-METEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~-~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .+...|+.+|++.+.+.+       ..|+++++|+||.+.++......   . ..........+.+++|+|++++.++..
T Consensus       172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  251 (270)
T 3ftp_A          172 PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASP  251 (270)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCC
Confidence            235679999999987764       25899999999999886421110   0 000011123467999999999888854


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      ..  ..|+++++.+
T Consensus       252 ~~~~itG~~i~vdG  265 (270)
T 3ftp_A          252 QAGYITGTTLHVNG  265 (270)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             CcCCccCcEEEECC
Confidence            32  3567777755

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.92  E-value=2.9e-24  Score=182.62  Aligned_cols=192  Identities=18%  Similarity=0.212  Sum_probs=133.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++|++|||||+|+||+++++.|+++|++|++++|+.++..+..   .....++.++.+|++| .+++.++++.      
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD-RHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999987655432   1234678899999999 7777766541      


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||+.......    +.+..             +.+++.+++.+.++||++||...+...            .
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~------------~  148 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV------------P  148 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC------------T
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC------------C
Confidence            399999999975432211    11111             677777877777899999999765432            2


Q ss_pred             hhHHHHHHHHHHHHHHHH-----hCCcEEEEecCcccCCCCCCceee---cccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          198 VFGLTLIAKLQAEQYIRK-----SGINYTIIRPGGLRNEPPTGNIIM---ETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~---~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      ....|+.+|++.+.+.+.     .++++++|+||.+.++........   .........+.+++|+|++++.++..+..
T Consensus       149 ~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          149 TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCcc
Confidence            256799999999987642     389999999999988753321100   00001112257899999999999987653

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=4.6e-24  Score=179.59  Aligned_cols=192  Identities=15%  Similarity=0.094  Sum_probs=131.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc---------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG---------  133 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---------  133 (296)
                      ++|+|+||||+|+||++++++|+++|  ++|++++|+.++..++......++.++.+|++| .+++.++++         
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCC-HHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999  999999999876654432124578999999999 888777765         


Q ss_pred             CCCCEEEEcCCCCC-CCC----CcchhHH-------------HHHHHHHHHc------C-----CCEEEEEccceeccCc
Q 022495          134 DDSEAVVCATGFQP-GWD----LFAPWKA-------------INLVEACRKR------G-----VNRFILISSILVNGAA  184 (296)
Q Consensus       134 ~~~d~vv~~ag~~~-~~~----~~~~~~~-------------~~~l~~~~~~------~-----~~~iV~~SS~~~~~~~  184 (296)
                      + +|+||||||... ...    ....+..             +.+++.+++.      +     .++||++||...+...
T Consensus        81 ~-id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           81 G-LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             C-CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             C-CcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence            6 999999999754 111    1111111             4455555554      4     6799999999765432


Q ss_pred             cCccCChhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHH
Q 022495          185 MGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAE  257 (296)
Q Consensus       185 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~  257 (296)
                      ...     ..+..+...|+.+|++.+.+++.       .++++++|+||++.++....           ..+++++|+|+
T Consensus       160 ~~~-----~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~~~~a~  223 (250)
T 1yo6_A          160 NTS-----GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------NAALTVEQSTA  223 (250)
T ss_dssp             CCS-----TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------HHHHH
T ss_pred             ccc-----ccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------CCCCCHHHHHH
Confidence            110     00113456799999999987742       48999999999998865321           24689999999


Q ss_pred             HHHHHhcCCC--CCCCeEE
Q 022495          258 VAVEALLHPE--SSYKVVE  274 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~  274 (296)
                      .++.++..+.  ..+..+.
T Consensus       224 ~~~~~~~~~~~~~~G~~~~  242 (250)
T 1yo6_A          224 ELISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             HHHHHHTTCCGGGTTCEEE
T ss_pred             HHHHHHhcccccCCCeEEE
Confidence            9999998764  2444443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.92  E-value=2.1e-24  Score=182.85  Aligned_cols=198  Identities=20%  Similarity=0.149  Sum_probs=140.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhc-------CC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG-------DD  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~-------~~  135 (296)
                      +|+++||||+|+||++++++|+++|++|++++|++++..+...   ....++.++.+|++| .+++.++++       + 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~-   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGG-   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTC-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC-
Confidence            5899999999999999999999999999999999766543221   123578999999999 888877765       5 


Q ss_pred             CCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhh
Q 022495          136 SEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      +|+||||||........    +.+..             +.+++.+++.+ .++||++||...+...            .
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~  147 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------P  147 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------T
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC------------C
Confidence            99999999975422111    11110             66777777766 6799999998754321            1


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc--------------eeec-ccCccccCCcCHHHH
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN--------------IIME-TEDTLYEGTISRDQV  255 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~--------------~~~~-~~~~~~~~~i~~~Dv  255 (296)
                      ....|+.+|++.+.+.+       ..++++++|+||++.++.....              .... ........+.+++|+
T Consensus       148 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  227 (256)
T 1geg_A          148 ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDV  227 (256)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHH
Confidence            24679999999998765       2589999999999988642110              0000 000011247899999


Q ss_pred             HHHHHHHhcCCC--CCCCeEEEEe
Q 022495          256 AEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       256 a~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |++++.++..+.  ..|+++.+.+
T Consensus       228 A~~v~~l~s~~~~~~tG~~i~vdG  251 (256)
T 1geg_A          228 AACVSYLASPDSDYMTGQSLLIDG  251 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHhCccccCCCCCEEEeCC
Confidence            999998886542  3566776655

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.92  E-value=3.2e-25  Score=189.37  Aligned_cols=203  Identities=18%  Similarity=0.185  Sum_probs=146.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.    
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS-ESEIIEAFARLDEQ  100 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999987655432   1234679999999999 8887776652    


Q ss_pred             --CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||+......    .+.+..             +.+++.+++.+.++||++||...+..            
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~------------  168 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA------------  168 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB------------
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC------------
Confidence              49999999997543221    111111             66677777777789999999875432            


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      ..+...|+.+|++.+.+.+       ..|+++++|+||.+.++.........      ........+.+++|+|++++.+
T Consensus       169 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L  248 (271)
T 4ibo_A          169 RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFL  248 (271)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            1235679999999998765       25899999999999987532211000      0001113467899999999988


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +....  ..|+++++.+
T Consensus       249 ~s~~~~~itG~~i~vdG  265 (271)
T 4ibo_A          249 SASASDYVNGQIIYVDG  265 (271)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCccccCCCCcEEEECC
Confidence            76533  3566777755

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.92  E-value=1.7e-24  Score=183.62  Aligned_cols=200  Identities=17%  Similarity=0.165  Sum_probs=142.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ++|++|||||+|+||+++++.|+++|++|+++ .|+.+...+.   +.....++.++.+|++| .+++.++++.      
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ-PAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999987 7776554432   22234679999999999 7777766643      


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||........    +.+..             +.+++.+++.+.++||++||...+..            ..
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~  149 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY------------LE  149 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB------------CT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC------------CC
Confidence            489999999964432111    11111             66677778777789999999876532            22


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHHHHhc
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      +...|+.+|++.+.+.+       ..++++++|+||.+.++.........      ........+.+++|+|++++.++.
T Consensus       150 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s  229 (258)
T 3oid_A          150 NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVS  229 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            35779999999998775       25899999999999987532211000      000111347899999999998887


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      ...  ..|+++++.+
T Consensus       230 ~~~~~itG~~i~vdG  244 (258)
T 3oid_A          230 SKADMIRGQTIIVDG  244 (258)
T ss_dssp             STTTTCCSCEEEEST
T ss_pred             cccCCccCCEEEECC
Confidence            643  3567777755

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.92  E-value=1.6e-24  Score=184.95  Aligned_cols=197  Identities=18%  Similarity=0.147  Sum_probs=141.1

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ..++++|+||||||+|+||++++++|+++|++|++++|+.+...       ..+.++++|++| .+++.++++.      
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-------NVSDHFKIDVTN-EEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-------TSSEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-------CceeEEEecCCC-HHHHHHHHHHHHHHcC
Confidence            34667999999999999999999999999999999999876531       367889999999 8877776642      


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|+||||||+.......    +.+.    +         +.+++.+++.+.++||++||...|...            .
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~  148 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT------------K  148 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC------------T
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC------------C
Confidence            399999999975432211    1111    1         666677777777899999999876532            2


Q ss_pred             hhHHHHHHHHHHHHHHH----Hh--CCcEEEEecCcccCCCCCCceee---------c------ccCccccCCcCHHHHH
Q 022495          198 VFGLTLIAKLQAEQYIR----KS--GINYTIIRPGGLRNEPPTGNIIM---------E------TEDTLYEGTISRDQVA  256 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~----~~--~~~~~~lrp~~i~g~~~~~~~~~---------~------~~~~~~~~~i~~~Dva  256 (296)
                      ....|+.+|++.+.+.+    +.  ++++++|+||.+.++........         .      ........+.+++|+|
T Consensus       149 ~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA  228 (269)
T 3vtz_A          149 NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVA  228 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHH
Confidence            25679999999998775    22  89999999999998642111000         0      0001113467899999


Q ss_pred             HHHHHHhcCCC--CCCCeEEEEe
Q 022495          257 EVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       257 ~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++++.++....  ..|+++++.+
T Consensus       229 ~~v~~L~s~~~~~itG~~i~vdG  251 (269)
T 3vtz_A          229 EVVAFLASDRSSFITGACLTVDG  251 (269)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCCccCCCcCcEEEECC
Confidence            99998887543  3567777755

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.92  E-value=5.7e-24  Score=182.07  Aligned_cols=205  Identities=13%  Similarity=0.144  Sum_probs=146.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.+...+..   .....++.++.+|++| .+++.++++.    
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ-PDQVRGMLDQMTGE  106 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999987655432   2234678999999999 8887776652    


Q ss_pred             --CCCEEEEcCCCCCCCCC----cchhH----H---------HHHHHHHHHcCC-CEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGWDL----FAPWK----A---------INLVEACRKRGV-NRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~----~~~~~----~---------~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|+||||||.......    .+.+.    .         +.+++.+++.+. ++||++||...+.....        
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~--------  178 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP--------  178 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC--------
Confidence              39999999997543221    11111    1         666677776653 79999999876532211        


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec---ccCccccCCcCHHHHHHHHHHHhc
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME---TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~---~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                        .+...|+.+|++.+.+.+       ..++++++|+||.+.++.........   ........+.+++|+|++++.++.
T Consensus       179 --~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  256 (276)
T 3r1i_A          179 --QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLAS  256 (276)
T ss_dssp             --SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHS
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence              124679999999998765       25899999999999987643221000   001111346789999999998887


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      ...  ..|+++++.+
T Consensus       257 ~~~~~itG~~i~vdG  271 (276)
T 3r1i_A          257 AASSYMTGSDIVIDG  271 (276)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             ccccCccCcEEEECc
Confidence            533  3566776654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.92  E-value=9.3e-25  Score=184.06  Aligned_cols=202  Identities=17%  Similarity=0.185  Sum_probs=144.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.      ++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISD-PGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHCCCC
Confidence            4678999999999999999999999999999999999877665433234678999999999 8877776652      39


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |+||||||........    +.+..             +.+++.+++.+ .++||++||...+..            ...
T Consensus        82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~  149 (247)
T 3rwb_A           82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG------------TPN  149 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT------------CTT
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC------------CCC
Confidence            9999999975432211    11111             56666687776 679999999865432            223


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-----ecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-----~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ...|+.+|++.+.+.+       ..|+++++|+||.+.++.......     ..........+.+++|+|++++.++...
T Consensus       150 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~  229 (247)
T 3rwb_A          150 MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD  229 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCcc
Confidence            5679999999987764       268999999999998863211100     0000011234678999999998888654


Q ss_pred             C--CCCCeEEEEe
Q 022495          267 E--SSYKVVEIIS  277 (296)
Q Consensus       267 ~--~~~~~~~i~~  277 (296)
                      .  ..|+++++.+
T Consensus       230 ~~~itG~~i~vdG  242 (247)
T 3rwb_A          230 ARWITGQTLNVDA  242 (247)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             ccCCCCCEEEECC
Confidence            3  3566666654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.92  E-value=6.7e-24  Score=181.05  Aligned_cols=202  Identities=16%  Similarity=0.155  Sum_probs=140.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      .+++|+++||||+|+||++++++|+++|++|+++++. .+...+.   ......++.++.+|++| .+++.++++.    
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD-FESCERCAEKVLAD  100 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999844 3333221   12234679999999999 7877766641    


Q ss_pred             --CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||+......    ...+..             +.+++.+++.+.++||++||...+..            
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------  168 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG------------  168 (269)
T ss_dssp             HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC------------
T ss_pred             cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC------------
Confidence              39999999997543221    111111             56666667777789999999865432            


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----cc-cCccccCCcCHHHHHHHHHHHh
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ET-EDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~~-~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      ..+...|+.+|++.+.+.+       ..|+++++|+||.+.++........    .. .......+.+++|+|++++.++
T Consensus       169 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~  248 (269)
T 3gk3_A          169 AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLC  248 (269)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHT
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHh
Confidence            2235679999999987764       2589999999999998764332110    00 0111134678999999999888


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..|+++++.+
T Consensus       249 s~~~~~itG~~i~vdg  264 (269)
T 3gk3_A          249 SDDAGFVTGADLAING  264 (269)
T ss_dssp             STTCTTCCSCEEEEST
T ss_pred             CCCcCCeeCcEEEECC
Confidence            7643  4567777765

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.92  E-value=5.9e-24  Score=179.36  Aligned_cols=197  Identities=16%  Similarity=0.193  Sum_probs=139.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+++...+.     ..+.++ +|+.+..+.+.+.+.+ +|+|||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~-~D~~~~~~~~~~~~~~-iD~lv~   87 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----GHRYVV-CDLRKDLDLLFEKVKE-VDILVL   87 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-----CSEEEE-CCTTTCHHHHHHHSCC-CSEEEE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-----CCeEEE-eeHHHHHHHHHHHhcC-CCEEEE
Confidence            456799999999999999999999999999999999997544332     256777 9994324555555556 999999


Q ss_pred             cCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          142 ATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       142 ~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      |||.......    ...+..             +.+++.|++.+.++||++||..++...            .+...|+.
T Consensus        88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~  155 (249)
T 1o5i_A           88 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI------------ENLYTSNS  155 (249)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TTBHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC------------CCCchHHH
Confidence            9997543211    111111             677888888888899999999876532            22467999


Q ss_pred             HHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc---eee-c-ccCccccCCcCHHHHHHHHHHHhcCCC--CCC
Q 022495          205 AKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN---IIM-E-TEDTLYEGTISRDQVAEVAVEALLHPE--SSY  270 (296)
Q Consensus       205 sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~---~~~-~-~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~  270 (296)
                      +|.+.+.+.+       ..|+++++|+||.+.++.....   ... . ........+.+++|+|++++.++..+.  ..|
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG  235 (249)
T 1o5i_A          156 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTG  235 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCC
Confidence            9999987764       2589999999999999753210   000 0 000111346899999999998887543  346


Q ss_pred             CeEEEEe
Q 022495          271 KVVEIIS  277 (296)
Q Consensus       271 ~~~~i~~  277 (296)
                      +++++.+
T Consensus       236 ~~~~vdg  242 (249)
T 1o5i_A          236 QTIVVDG  242 (249)
T ss_dssp             CEEEEST
T ss_pred             CEEEECC
Confidence            7777765

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=2.4e-24  Score=183.36  Aligned_cols=201  Identities=12%  Similarity=0.185  Sum_probs=142.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++..+..   .....++.++.+|++| .+++.++++.     
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD-DAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999987655432   1234679999999999 8877766642     


Q ss_pred             -CCCEEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||........     +.+..             +.+++.+++.+ ++||++||...+...           
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------  154 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQ-----------  154 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCC-----------
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCC-----------
Confidence             499999999874322111     11111             55556666655 799999998765322           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-------------e--cccCccccCCcCHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------------M--ETEDTLYEGTISRD  253 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-------------~--~~~~~~~~~~i~~~  253 (296)
                       .....|+.+|++.+.+.+       ..|+++++|+||.++++.......             .  .........+.+++
T Consensus       155 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  233 (264)
T 3ucx_A          155 -AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED  233 (264)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHH
T ss_pred             -CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHH
Confidence             235679999999998764       268999999999998864221100             0  00011123478899


Q ss_pred             HHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          254 QVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       254 Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |+|++++.++....  ..|+++++.+
T Consensus       234 dvA~~v~~L~s~~~~~itG~~i~vdG  259 (264)
T 3ucx_A          234 EVASAILFMASDLASGITGQALDVNC  259 (264)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHcCccccCCCCCEEEECC
Confidence            99999998886532  3567777755

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.92  E-value=5.2e-24  Score=181.35  Aligned_cols=203  Identities=17%  Similarity=0.108  Sum_probs=141.4

Q ss_pred             ccCCCCeEEEEcCCc-hHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----cCCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATG-SSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      +.+++|+++||||+| +||++++++|+++|++|++++|+.++..+..    .....++.++.+|++| .+++.++++.  
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~   96 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS-TEAVDALITQTV   96 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC-HHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC-HHHHHHHHHHHH
Confidence            456789999999997 7999999999999999999999987654322    1123579999999999 8877766642  


Q ss_pred             ----CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHc-CCCEEEEEccceeccCccCccCChh
Q 022495          135 ----DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKR-GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                          ++|+||||||+.......    +.+..             +.+++.+++. +.++||++||...+...        
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  168 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ--------  168 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC--------
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC--------
Confidence                499999999975432211    11111             5555666655 56799999998765322        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-----cccCccccCCcCHHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-----~~~~~~~~~~i~~~Dva~~i~  260 (296)
                          .+...|+.+|++.+.+.+       ..++++++|+||.+.++........     .........+.+++|+|++++
T Consensus       169 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~  244 (266)
T 3o38_A          169 ----HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIA  244 (266)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence                235679999999998765       2689999999999998753321110     001111234789999999999


Q ss_pred             HHhcCCC--CCCCeEEEEe
Q 022495          261 EALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~  277 (296)
                      .++....  ..|+++++.+
T Consensus       245 ~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          245 FLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESS
T ss_pred             HHcCccccCccCCEEEEcC
Confidence            8887532  4567777755

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.92  E-value=2.8e-24  Score=181.09  Aligned_cols=191  Identities=16%  Similarity=0.219  Sum_probs=135.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++..+...   ....++.++.+|++| .+++.++++.     
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD-RQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999999999999776543221   124578999999999 8877766541     


Q ss_pred             -CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 -DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                       ++|+||||||.......    ...+..             +.+++.+++.+ ++||++||...+...            
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------  149 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV------------  149 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC------------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC------------
Confidence             39999999997532211    111111             56667776667 899999998765321            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec--c-cCc--cccCCcCHHHHHHHHHHHhc
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME--T-EDT--LYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~--~-~~~--~~~~~i~~~Dva~~i~~~l~  264 (296)
                      .....|+.+|++.+.+.+       ..|+++++|+||++.++.........  . ...  ...++++++|+|++++.++.
T Consensus       150 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s  229 (247)
T 2jah_A          150 RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVT  229 (247)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcccccCCCCHHHHHHHHHHHhC
Confidence            225679999999987664       35899999999999987532210000  0 000  01124899999999999987


Q ss_pred             CCC
Q 022495          265 HPE  267 (296)
Q Consensus       265 ~~~  267 (296)
                      .+.
T Consensus       230 ~~~  232 (247)
T 2jah_A          230 APH  232 (247)
T ss_dssp             SCT
T ss_pred             CCc
Confidence            653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.92  E-value=3.3e-24  Score=181.25  Aligned_cols=195  Identities=14%  Similarity=0.126  Sum_probs=135.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|++++.        ..+.++.+|++| .+++.++++.      +
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g~   87 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP--------EGFLAVKCDITD-TEQVEQAYKEIEETHGP   87 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------TTSEEEECCTTS-HHHHHHHHHHHHHHTCS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh--------ccceEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999999987543        237899999999 8877766543      4


Q ss_pred             CCEEEEcCCCCCCCC----Ccchh------HH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWD----LFAPW------KA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~----~~~~~------~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||......    ..+.+      +.       +.+++.+++.+.++||++||...+..            ...
T Consensus        88 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~  155 (253)
T 2nm0_A           88 VEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG------------SAG  155 (253)
T ss_dssp             CSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC------------HHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC------------CCC
Confidence            899999999753211    11111      11       55666777767789999999865431            223


Q ss_pred             hHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          199 FGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ...|+.+|++.+.+.+.       .++++++|+||.+.++......  ...  ........+++++|+|++++.++..+.
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~  235 (253)
T 2nm0_A          156 QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDA  235 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            56799999999987652       5899999999999887532210  000  000111347899999999999887543


Q ss_pred             --CCCCeEEEEe
Q 022495          268 --SSYKVVEIIS  277 (296)
Q Consensus       268 --~~~~~~~i~~  277 (296)
                        ..++.+.+.+
T Consensus       236 ~~~tG~~i~vdG  247 (253)
T 2nm0_A          236 SYITGAVIPVDG  247 (253)
T ss_dssp             TTCCSCEEEEST
T ss_pred             cCCcCcEEEECC
Confidence              3566766654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.92  E-value=4.9e-24  Score=181.28  Aligned_cols=204  Identities=20%  Similarity=0.216  Sum_probs=140.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh----cccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----TLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.....+    .......++.++.+|++| .+++.++++.    
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK-KEDLHKIVEEAMSH   82 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999887644322    222223579999999999 8887777651    


Q ss_pred             --CCCEEEEcCCC--CCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 --DSEAVVCATGF--QPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 --~~d~vv~~ag~--~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                        ++|+||||||.  ......    .+.+..             +.+++.+++.+.++||++||...++..         
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  153 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP---------  153 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC---------
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC---------
Confidence              39999999994  221111    111111             556666678777899999998543211         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----cccCccccCCcCHHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                       +..+...|+.+|++.+.+.+       ..++++++|+||.++++........    .........+.+++|+|++++.+
T Consensus       154 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l  232 (264)
T 3i4f_A          154 -GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFL  232 (264)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHH
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence             12235679999999998764       2689999999999998754332100    00111123467899999999998


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +..+.  ..|+++++.+
T Consensus       233 ~s~~~~~itG~~i~vdG  249 (264)
T 3i4f_A          233 CEDDSDMITGTIIEVTG  249 (264)
T ss_dssp             HSGGGTTCCSCEEEESC
T ss_pred             cCcccCCCCCcEEEEcC
Confidence            87543  3577888866

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.92  E-value=7.3e-24  Score=180.99  Aligned_cols=203  Identities=14%  Similarity=0.134  Sum_probs=143.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-hh---cccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|+|+||||+|+||++++++|+++|++|++++|+.... ..   .+.....++.++.+|++| .+++.++++.   
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~  103 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAAS-ESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHH
Confidence            467789999999999999999999999999999999964432 21   222234689999999999 8877776651   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         ++|+||||||........    +.+..             +.+++.+++.+.++||++||...+..           
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  172 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG-----------  172 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-----------
Confidence               499999999976543211    11111             66777777777789999999865432           


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---ec-ccCccccCCcCHHHHHHHHHHHh
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---ME-TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~~-~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                       ..+...|+.+|++.+.+.+       ..++++++|+||.+.++.......   .. ........+.+++|+|++++.++
T Consensus       173 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~  251 (271)
T 4iin_A          173 -NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLL  251 (271)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred             -CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHh
Confidence             2235679999999998764       258999999999999875332110   00 00111234789999999999888


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ..+.  ..|+++++.+
T Consensus       252 s~~~~~itG~~i~vdG  267 (271)
T 4iin_A          252 SDHSSYITGETLKVNG  267 (271)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CCCcCCCcCCEEEeCC
Confidence            7543  4567777755

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.92  E-value=3.5e-24  Score=181.85  Aligned_cols=201  Identities=15%  Similarity=0.131  Sum_probs=141.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-Ccchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhc-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      ++++|+|+||||+|+||++++++|+++|++|++++| +++...+..   .....++.++.+|++| .+.+.++++     
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   82 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKE   82 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999 655443321   1123568899999999 887777665     


Q ss_pred             --CCCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhh
Q 022495          134 --DDSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       134 --~~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                        + +|+||||||.......    ...+..             +.+++.+++.+ .++||++||...+..          
T Consensus        83 ~g~-id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~----------  151 (261)
T 1gee_A           83 FGK-LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP----------  151 (261)
T ss_dssp             HSC-CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC----------
T ss_pred             cCC-CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC----------
Confidence              5 9999999997543211    111110             55667777766 679999999865432          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~  260 (296)
                        ..+...|+.+|++.+.+.+       ..++++++|+||.++++.........      ........+.+++|+|++++
T Consensus       152 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  229 (261)
T 1gee_A          152 --WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAA  229 (261)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              2235679999999987664       24899999999999987532110000      00011134789999999999


Q ss_pred             HHhcCC--CCCCCeEEEEe
Q 022495          261 EALLHP--ESSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~--~~~~~~~~i~~  277 (296)
                      .++..+  ...++.+++.+
T Consensus       230 ~l~~~~~~~~~G~~~~v~g  248 (261)
T 1gee_A          230 WLASSEASYVTGITLFADG  248 (261)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCccccCCCCcEEEEcC
Confidence            988753  23566777765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.92  E-value=1.3e-24  Score=182.96  Aligned_cols=200  Identities=16%  Similarity=0.137  Sum_probs=133.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhc-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      ++++|+++||||+|+||++++++|+++|++|+++ .|+++...+.   +.....++.++.+|++| .+.+.++++     
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN-PEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999998 5665544322   11124578999999999 888877665     


Q ss_pred             --CCCCEEEEcCCCCCCC-----CCcc---hhHH---------HHHHHHHHHcCCCEEEEEcccee-ccCccCccCChhh
Q 022495          134 --DDSEAVVCATGFQPGW-----DLFA---PWKA---------INLVEACRKRGVNRFILISSILV-NGAAMGQILNPAY  193 (296)
Q Consensus       134 --~~~d~vv~~ag~~~~~-----~~~~---~~~~---------~~~l~~~~~~~~~~iV~~SS~~~-~~~~~~~~~~~~~  193 (296)
                        + +|+||||||.....     ....   ....         +.+++.+++.+.++||++||... |+.          
T Consensus        81 ~~~-~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  149 (247)
T 2hq1_A           81 FGR-IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN----------  149 (247)
T ss_dssp             HSC-CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             cCC-CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC----------
Confidence              5 99999999975321     1111   1111         55666666777789999999854 321          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                         .+...|+.+|++.+.+.+.       .++++++++||.+.++......  ...  ........+++++|+|++++.+
T Consensus       150 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (247)
T 2hq1_A          150 ---AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFL  226 (247)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             ---CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHH
Confidence               1246799999999987752       4899999999999875321100  000  0011123478999999999988


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +..+.  ..++++++.+
T Consensus       227 ~~~~~~~~~G~~~~v~g  243 (247)
T 2hq1_A          227 ASDDSNYITGQVINIDG  243 (247)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             cCcccccccCcEEEeCC
Confidence            87542  3567888865

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.92  E-value=2.6e-24  Score=184.57  Aligned_cols=201  Identities=16%  Similarity=0.204  Sum_probs=139.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++..+..   .....++.++.+|++| .+++.++++.      
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS-TDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999987655322   2235679999999999 7877766542      


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHH--HHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWKA-------------INLVE--ACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~--~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      ++|+||||||........    +.+..             +.+++  .+++.+.++||++||...+...           
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~-----------  169 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV-----------  169 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC-----------
Confidence            499999999975432211    11111             44444  3555667899999999765322           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---------ee------cccCccccCCcCHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---------IM------ETEDTLYEGTISRD  253 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---------~~------~~~~~~~~~~i~~~  253 (296)
                       .....|+.+|++++.+.+       ..|+++++|+||.+.++......         ..      .........+.+++
T Consensus       170 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  248 (279)
T 3sju_A          170 -MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE  248 (279)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHH
T ss_pred             -CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHH
Confidence             225679999999988765       26899999999999886321100         00      00011113468899


Q ss_pred             HHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          254 QVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       254 Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |+|++++.++....  ..|+++++.+
T Consensus       249 dvA~~v~~L~s~~a~~itG~~i~vdG  274 (279)
T 3sju_A          249 EVAGLVGYLVTDAAASITAQALNVCG  274 (279)
T ss_dssp             HHHHHHHHHTSSGGGGCCSCEEEEST
T ss_pred             HHHHHHHHHhCccccCcCCcEEEECC
Confidence            99999988886543  4567777755

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.92  E-value=1.4e-23  Score=180.56  Aligned_cols=202  Identities=18%  Similarity=0.124  Sum_probs=142.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc----------------chhhh---cccCCCCCeEEEEcccCC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL----------------DKAKT---TLSKDNPSLQIVKADVTE  123 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~----------------~~~~~---~~~~~~~~~~~~~~D~~d  123 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.                +...+   .+.....++.++.+|++|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            46789999999999999999999999999999999872                22221   122245679999999999


Q ss_pred             ChHHHHHHhcC------CCCEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcC-CCEEEEEccc
Q 022495          124 GSAKLSEAIGD------DSEAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRG-VNRFILISSI  178 (296)
Q Consensus       124 ~~~~~~~~~~~------~~d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~  178 (296)
                       .+++.++++.      ++|+||||||+......     .+.+..             +.+++.+++.+ .++||++||.
T Consensus        88 -~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (286)
T 3uve_A           88 -YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV  166 (286)
T ss_dssp             -HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             -HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence             8877776642      49999999997543321     111111             66667776655 5799999999


Q ss_pred             eeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce----ee-----c--
Q 022495          179 LVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI----IM-----E--  240 (296)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~----~~-----~--  240 (296)
                      ..+...            .....|+.+|++++.+.+       ..|+++++|+||++.++......    ..     .  
T Consensus       167 ~~~~~~------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  234 (286)
T 3uve_A          167 GGLKAY------------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGP  234 (286)
T ss_dssp             GGTSCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCH
T ss_pred             hhccCC------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccch
Confidence            765322            235679999999998765       26899999999999998654210    00     0  


Q ss_pred             --------ccCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          241 --------TEDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       241 --------~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                              ........+.+++|+|++++.++....  ..|+++++.+
T Consensus       235 ~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  281 (286)
T 3uve_A          235 DDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDA  281 (286)
T ss_dssp             HHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence                    011111457899999999998886432  3566776654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=2.1e-24  Score=185.22  Aligned_cols=202  Identities=17%  Similarity=0.141  Sum_probs=141.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCC---CeEEEEcccCCChHHHHHHhcC--
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNP---SLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~---~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++..+..   .....   ++.++.+|++| .+++.++++.  
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~   81 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTL   81 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC-HHHHHHHHHHHH
Confidence            356899999999999999999999999999999999987654322   11222   68999999999 7877766542  


Q ss_pred             ----CCCEEEEcCCCCCCCC----C----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccC
Q 022495          135 ----DSEAVVCATGFQPGWD----L----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~----~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~  189 (296)
                          ++|+||||||......    .    .+.+..             +.+++.+++.+ ++||++||...+....    
T Consensus        82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----  156 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ----  156 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC----
T ss_pred             HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCC----
Confidence                3999999999754321    0    011111             55666666666 8999999987654320    


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-----------eec-c-cCccccCC
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----------IME-T-EDTLYEGT  249 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-----------~~~-~-~~~~~~~~  249 (296)
                             .+...|+.+|++.+.+.+       ..|+++++|+||++.++......           ... . .......+
T Consensus       157 -------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  229 (280)
T 1xkq_A          157 -------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAA  229 (280)
T ss_dssp             -------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCC
Confidence                   124679999999998764       25899999999999987422110           000 0 00111346


Q ss_pred             cCHHHHHHHHHHHhcCC---CCCCCeEEEEe
Q 022495          250 ISRDQVAEVAVEALLHP---ESSYKVVEIIS  277 (296)
Q Consensus       250 i~~~Dva~~i~~~l~~~---~~~~~~~~i~~  277 (296)
                      .+++|+|++++.++..+   ...++++++.+
T Consensus       230 ~~pedvA~~v~~l~s~~~~~~~tG~~i~vdg  260 (280)
T 1xkq_A          230 GKPEHIANIILFLADRNLSFYILGQSIVADG  260 (280)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CCHHHHHHHHHHhcCcccccCccCCeEEECC
Confidence            89999999999988654   24567777755

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.92  E-value=4.4e-24  Score=183.71  Aligned_cols=203  Identities=17%  Similarity=0.106  Sum_probs=141.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +.+++|+|+||||+|+||+++++.|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.    
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~  118 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTE  118 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC-HHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999998876554322   2224578999999999 8888777631    


Q ss_pred             --CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||......    ....+..             +.+++.+++.+.++||++||...+...           
T Consensus       119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------  187 (285)
T 2c07_A          119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-----------  187 (285)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------
Confidence              3999999999754321    1111111             566666767777899999998654321           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHHHHHHHhc
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                       .+...|+.+|.+.+.+.+       ..++++++|+||.+.++......  ...  ........+++++|+|++++.++.
T Consensus       188 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~  266 (285)
T 2c07_A          188 -VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSS  266 (285)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhC
Confidence             124679999999987764       24899999999999987533210  000  000111347899999999999887


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      .+.  ..++.+++.+
T Consensus       267 ~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          267 DKSGYINGRVFVIDG  281 (285)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             CCcCCCCCCEEEeCC
Confidence            543  3567777755

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.92  E-value=1.7e-24  Score=184.40  Aligned_cols=195  Identities=16%  Similarity=0.137  Sum_probs=137.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.+...        ....+.+|++| .+.+.++++.      +
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--------~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~   94 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------ADLHLPGDLRE-AAYADGLPGAVAAGLGR   94 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--------CSEECCCCTTS-HHHHHHHHHHHHHHHSC
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------hhhccCcCCCC-HHHHHHHHHHHHHhcCC
Confidence            4567899999999999999999999999999999999876542        22445799999 7766655431      3


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    .+.+..             +.+++.+++.+.++||++||...+..            ..+
T Consensus        95 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~  162 (266)
T 3uxy_A           95 LDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP------------GPG  162 (266)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC------------CTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC------------CCC
Confidence            9999999997543221    111111             66666678777789999999876532            123


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-----------cccCccccCCcCHHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----------ETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-----------~~~~~~~~~~i~~~Dva~~i~  260 (296)
                      ...|+.+|++++.+.+       ..|+++++|+||.+.++........           .........+.+++|+|++++
T Consensus       163 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  242 (266)
T 3uxy_A          163 HALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVL  242 (266)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            5679999999998765       2489999999999998642111000           000111234679999999999


Q ss_pred             HHhcCCC--CCCCeEEEEe
Q 022495          261 EALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~  277 (296)
                      .++....  ..|+++++.+
T Consensus       243 ~L~s~~~~~itG~~i~vdG  261 (266)
T 3uxy_A          243 FLASDAARYLCGSLVEVNG  261 (266)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhcCCcCCEEEECc
Confidence            8887643  3467777755

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.92  E-value=2.1e-24  Score=181.66  Aligned_cols=198  Identities=20%  Similarity=0.198  Sum_probs=123.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHH---HHHhcC--CCC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKL---SEAIGD--DSE  137 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~~~--~~d  137 (296)
                      ++++|++|||||+|+||++++++|++ |+.|++++|+++...+...  ..++.++.+|++| .+..   .+.++.  ++|
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~--~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE--IEGVEPIESDIVK-EVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT--STTEEEEECCHHH-HHHTSSSCGGGTTCSCCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh--hcCCcceecccch-HHHHHHHHHHHHhcCCCC
Confidence            45689999999999999999999987 9999999999877665542  3578999999988 5431   122221  499


Q ss_pred             EEEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          138 AVVCATGFQPGWDLF----APWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      +||||||........    +.+.    .         +.+++.+++.+ ++||++||...+...            ....
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~------------~~~~  144 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPH------------PGNT  144 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------------------CH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCC------------CCch
Confidence            999999975432211    1111    0         66666676666 799999999766432            2356


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeE
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVV  273 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~  273 (296)
                      .|+.+|++.+.+.+       ..|+++++|+||.+.++.................+++++|+|++++.++..+. .+.++
T Consensus       145 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~-~~~~~  223 (245)
T 3e9n_A          145 IYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGE-TTQIT  223 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHTSCT-TEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCC-cccee
Confidence            79999999998775       25899999999999987543322111111112347899999999999998765 45677


Q ss_pred             EEEeC
Q 022495          274 EIISR  278 (296)
Q Consensus       274 ~i~~~  278 (296)
                      ++.-.
T Consensus       224 ~i~~~  228 (245)
T 3e9n_A          224 NVDVR  228 (245)
T ss_dssp             EEEEE
T ss_pred             eeEEE
Confidence            76553

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.92  E-value=1e-23  Score=178.81  Aligned_cols=198  Identities=18%  Similarity=0.150  Sum_probs=140.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch--hhhc---ccCCCCCeEEEEcccCCChHHHHHHhc-------
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIG-------  133 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~-------  133 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+++.  ..+.   +.....++.++.+|++| .+++.++++       
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD-KANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999998766  4332   11124578999999999 887777665       


Q ss_pred             CCCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCC-CEEEEEccceeccCccCccCChhhhh
Q 022495          134 DDSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGV-NRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      + +|+||||||.......    .+.+..             +.+++.+++.+. ++||++||...+...           
T Consensus        81 ~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  148 (258)
T 3a28_C           81 G-FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF-----------  148 (258)
T ss_dssp             C-CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC-----------
T ss_pred             C-CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC-----------
Confidence            5 9999999997543211    111111             566677776676 899999998765321           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-------------ee-cc-cCccccCCcCHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-------------IM-ET-EDTLYEGTISRD  253 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-------------~~-~~-~~~~~~~~i~~~  253 (296)
                       .+...|+.+|++.+.+.+       ..++++++|+||.+.++......             .. .. .......+.+++
T Consensus       149 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  227 (258)
T 3a28_C          149 -PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPE  227 (258)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHH
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHH
Confidence             225679999999997765       25899999999999886421100             00 00 000112378999


Q ss_pred             HHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          254 QVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       254 Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |+|++++.++..+.  ..|+++.+.+
T Consensus       228 dvA~~v~~l~s~~~~~~tG~~i~vdG  253 (258)
T 3a28_C          228 DVAGLVSFLASENSNYVTGQVMLVDG  253 (258)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHhCcccCCCCCCEEEECC
Confidence            99999998886542  3566776655

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.92  E-value=9.7e-24  Score=181.05  Aligned_cols=202  Identities=14%  Similarity=0.125  Sum_probs=133.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-Ccchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++| +.+...+.   +.....++.++.+|++| .+++.++++.    
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  104 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD-LSSHQATVDAVVAE  104 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS-GGGHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999996 44433322   11234679999999999 7777766651    


Q ss_pred             --CCCEEEEcCCCC--CCCC----CcchhHH-------------HHHHHHHHHcC---CCEEEEEccceeccCccCccCC
Q 022495          135 --DSEAVVCATGFQ--PGWD----LFAPWKA-------------INLVEACRKRG---VNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 --~~d~vv~~ag~~--~~~~----~~~~~~~-------------~~~l~~~~~~~---~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                        ++|+||||||+.  ....    ..+.+..             +.+++.+++.+   .++||++||...+...      
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------  178 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS------  178 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC------
Confidence              399999999973  2111    1111111             66777777654   5699999998765321      


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-----ecccCccccCCcCHHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQVAEV  258 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-----~~~~~~~~~~~i~~~Dva~~  258 (296)
                            .....|+.+|++.+.+.+       ..|+++++|+||.+.++.......     ..........+.+++|+|++
T Consensus       179 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  252 (280)
T 4da9_A          179 ------PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNI  252 (280)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHH
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHH
Confidence                  224679999999998765       258999999999999875332110     00001112346789999999


Q ss_pred             HHHHhcCCC--CCCCeEEEEe
Q 022495          259 AVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++.++....  ..|+++++.+
T Consensus       253 v~~L~s~~~~~itG~~i~vdG  273 (280)
T 4da9_A          253 VAGLAGGQFGFATGSVIQADG  273 (280)
T ss_dssp             HHHHHTSTTGGGTTCEEEEST
T ss_pred             HHHHhCccccCCCCCEEEECC
Confidence            998887654  4577777755

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.92  E-value=1.3e-24  Score=185.31  Aligned_cols=203  Identities=19%  Similarity=0.216  Sum_probs=145.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc-----CCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.+...+...     .....+.++.+|++| .+.+.++++.  
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~g   84 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT-EQGCQDVIEKYP   84 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS-HHHHHHHHHHCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC-HHHHHHHHHhcC
Confidence            35678999999999999999999999999999999999876543221     113567889999999 8887777652  


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      ++|++|||||........    +.+..             +.+++.+++.+.++||++||...+...            .
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~  152 (267)
T 3t4x_A           85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS------------Q  152 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC------------T
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC------------C
Confidence            499999999975432211    11111             677888888877899999999765322            2


Q ss_pred             hhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCc---------eeec--------c--cCccccCCcC
Q 022495          198 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGN---------IIME--------T--EDTLYEGTIS  251 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~---------~~~~--------~--~~~~~~~~i~  251 (296)
                      ....|+.+|++.+.+.+.       .+++++.|+||.+.++.....         ....        .  .......+.+
T Consensus       153 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  232 (267)
T 3t4x_A          153 EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIR  232 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBC
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccC
Confidence            356799999999987752       479999999999988621110         0000        0  0011235789


Q ss_pred             HHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          252 RDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++|+|++++.++....  ..|+++++.+
T Consensus       233 pedvA~~v~fL~s~~~~~itG~~i~vdG  260 (267)
T 3t4x_A          233 PEEIAHLVTFLSSPLSSAINGSALRIDG  260 (267)
T ss_dssp             THHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHcCccccCccCCeEEECC
Confidence            9999999988887432  3566777755

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.92  E-value=5.6e-24  Score=182.60  Aligned_cols=200  Identities=18%  Similarity=0.167  Sum_probs=136.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC----CCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .++++|++|||||+|+||+++++.|+++|++|++++|+.++..+....    ....+.++.+|++| .+++.++++.   
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD-PDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC-HHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999998765543211    12235899999999 7877766542   


Q ss_pred             ---CCCEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcC--CCEEEEEccceeccCccCccCCh
Q 022495          135 ---DSEAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRG--VNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                         ++|+||||||.......     .+.+..             +.+++.+++.+  .++||++||...+...       
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------  180 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR-------  180 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC-------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC-------
Confidence               49999999997533111     111111             66777777764  5799999998754321       


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---eecccCccccCCcCHHHHHHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---IMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                           .+...|+.+|++.+.+.+       ..++++++|+||.+.++......   ...........+.+++|+|++++.
T Consensus       181 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~f  255 (281)
T 4dry_A          181 -----PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVY  255 (281)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHH
T ss_pred             -----CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHH
Confidence                 235679999999998765       36899999999999987543211   101111122347899999999999


Q ss_pred             HhcCCCCCCCeEEE
Q 022495          262 ALLHPESSYKVVEI  275 (296)
Q Consensus       262 ~l~~~~~~~~~~~i  275 (296)
                      ++..+.... +.++
T Consensus       256 L~s~~~~~~-i~~~  268 (281)
T 4dry_A          256 MASLPLSAN-VLTM  268 (281)
T ss_dssp             HHHSCTTEE-EEEE
T ss_pred             HhCCCccCc-cccE
Confidence            998876533 4443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.92  E-value=9.6e-24  Score=181.63  Aligned_cols=213  Identities=14%  Similarity=0.075  Sum_probs=143.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc------------chhhh---cccCCCCCeEEEEcccCCChHH
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL------------DKAKT---TLSKDNPSLQIVKADVTEGSAK  127 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~------------~~~~~---~~~~~~~~~~~~~~D~~d~~~~  127 (296)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.            ....+   .+.....++.++.+|++| .++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~   85 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD-RAA   85 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC-HHH
Confidence            56789999999999999999999999999999999872            22211   111134679999999999 887


Q ss_pred             HHHHhcC------CCCEEEEcCCCCCCCC--CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCcc
Q 022495          128 LSEAIGD------DSEAVVCATGFQPGWD--LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQI  188 (296)
Q Consensus       128 ~~~~~~~------~~d~vv~~ag~~~~~~--~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~  188 (296)
                      +.++++.      ++|+||||||+.....  ..+.+..         .++++++...  +.++||++||...+......+
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  165 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP  165 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc
Confidence            7766651      3999999999754321  1111111         5555655543  346999999987654332211


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee----e---------------ccc
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----M---------------ETE  242 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~----~---------------~~~  242 (296)
                      . .+..+..+...|+.+|++.+.+.+       ..|+++++|+||.+.++.......    .               ...
T Consensus       166 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (287)
T 3pxx_A          166 G-AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAM  244 (287)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGG
T ss_pred             c-ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhh
Confidence            1 112233557789999999998765       248999999999999986542110    0               011


Q ss_pred             CccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          243 DTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       243 ~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ......+.+++|+|++++.++....  ..|+++++.+
T Consensus       245 ~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG  281 (287)
T 3pxx_A          245 QAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDA  281 (287)
T ss_dssp             CSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccCCCCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence            1111457899999999998886432  3566776655

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.92  E-value=3.9e-25  Score=181.12  Aligned_cols=178  Identities=15%  Similarity=0.141  Sum_probs=132.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc---CCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG---DDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~~~d~vv~~a  143 (296)
                      |+++||||+|+||++++++|+++  +|++++|++++..+..... .. .++.+|++| .+++.++++   + +|+|||||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-~~-~~~~~D~~~-~~~~~~~~~~~~~-id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-GA-RALPADLAD-ELEAKALLEEAGP-LDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-TC-EECCCCTTS-HHHHHHHHHHHCS-EEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-cC-cEEEeeCCC-HHHHHHHHHhcCC-CCEEEECC
Confidence            58999999999999999999998  9999999987655432211 12 888999999 898988887   6 99999999


Q ss_pred             CCCCCCC----CcchhH------H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHH
Q 022495          144 GFQPGWD----LFAPWK------A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAE  210 (296)
Q Consensus       144 g~~~~~~----~~~~~~------~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e  210 (296)
                      |......    ....+.      .   .++++++++.+.++||++||..+|..            ..+...|+.+|.+.+
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~  142 (207)
T 2yut_A           75 GKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ------------VPGFAAYAAAKGALE  142 (207)
T ss_dssp             CCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS------------STTBHHHHHHHHHHH
T ss_pred             CcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC------------CCCcchHHHHHHHHH
Confidence            9754221    111111      1   67777776666789999999977642            223567999999999


Q ss_pred             HHHHH-------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          211 QYIRK-------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       211 ~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      .+++.       .+++++++|||.++++...+      .......+++++|+|++++.++.++..
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------~~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLWAP------LGGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG------GTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCccc------cCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            87753       58999999999999865211      112225689999999999999987653

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.92  E-value=3.1e-24  Score=181.20  Aligned_cols=188  Identities=16%  Similarity=0.135  Sum_probs=134.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC------CCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK------DNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      ++++|++|||||+|+||+++++.|+++|++|++++|+.++..+....      ...++.++.+|++| .+++.++++.  
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~   82 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD-CTKADTEIKDIH   82 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC-HHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC-HHHHHHHHHHHH
Confidence            45689999999999999999999999999999999998765543211      12678999999999 7777766542  


Q ss_pred             ----CCCEEEEcCCCCCCCCCcchh---HH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ----DSEAVVCATGFQPGWDLFAPW---KA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~~~~~---~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                          ++|+||||||+..........   ..             +.+++.+++.+.++||++||...+...          
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  152 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF----------  152 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC----------
Confidence                499999999975432221111   11             666777777777899999998754311          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                        .+...|+.+|++.+.+.+       ..|++++.|+||++.++.....    ........+++++|+|++++.++..+.
T Consensus       153 --~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          153 --ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKA----GTPFKDEEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             --CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHT----TCCSCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhc----CCCcccccCCCHHHHHHHHHHHHcCCC
Confidence              124679999999987765       2589999999999988632111    011112347899999999999998665

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.92  E-value=7e-24  Score=176.73  Aligned_cols=187  Identities=17%  Similarity=0.120  Sum_probs=131.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC---CCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~d~vv~~  142 (296)
                      ||++|||||+|+||++++++|+++|++|++++|++++..+.......++.++.+|++| .+++.++++.   ..|+||||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~d~lv~~   79 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLAS-HQEVEQLFEQLDSIPSTVVHS   79 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTC-HHHHHHHHHSCSSCCSEEEEC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCC-HHHHHHHHHHHhhcCCEEEEe
Confidence            4689999999999999999999999999999999887765544345678999999999 8999988876   24999999


Q ss_pred             CCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHH
Q 022495          143 TGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA  205 (296)
Q Consensus       143 ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s  205 (296)
                      ||........    +.+..             +.+++.+++.+. +||++||...+...            .....|+.+
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~------------~~~~~Y~as  146 (230)
T 3guy_A           80 AGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPK------------AQESTYCAV  146 (230)
T ss_dssp             CCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCC------------TTCHHHHHH
T ss_pred             CCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCC------------CCCchhHHH
Confidence            9975432211    11111             455555555554 99999998765422            235679999


Q ss_pred             HHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCC
Q 022495          206 KLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSY  270 (296)
Q Consensus       206 K~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~  270 (296)
                      |++.+.+.+.       .|++++.|+||.+.++......    .......+++++|+|++++.++.++...+
T Consensus       147 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~dvA~~i~~l~~~~~~~~  214 (230)
T 3guy_A          147 KWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG----KSLDTSSFMSAEDAALMIHGALANIGNGY  214 (230)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------CCCHHHHHHHHHHHCCEETTEE
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC----CCCCcccCCCHHHHHHHHHHHHhCcCCCC
Confidence            9999987652       4899999999999987533221    11112457899999999999988665433

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.92  E-value=3.9e-24  Score=182.02  Aligned_cols=194  Identities=12%  Similarity=0.118  Sum_probs=139.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|++|||||+|+||+++++.|+++|++|++++|++++        ..++.++.+|++| .+++.++++.      ++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDVTN-PDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999998754        2568999999999 8877776651      39


Q ss_pred             CEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||||......    ....+..             +.+++.+++.+.++||++||..++...            .+.
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~  143 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT------------KNA  143 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC------------TTB
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC------------CCc
Confidence            99999999754221    1111111             556666666677899999999765432            235


Q ss_pred             HHHHHHHHHHHHHHHH----hC--CcEEEEecCcccCCCCCCce-------------eecc--cCccccCCcCHHHHHHH
Q 022495          200 GLTLIAKLQAEQYIRK----SG--INYTIIRPGGLRNEPPTGNI-------------IMET--EDTLYEGTISRDQVAEV  258 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~~----~~--~~~~~lrp~~i~g~~~~~~~-------------~~~~--~~~~~~~~i~~~Dva~~  258 (296)
                      ..|+.+|++.+.+.+.    .+  +++++|+||.+.++......             ....  .......+++++|+|++
T Consensus       144 ~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  223 (264)
T 2dtx_A          144 SAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA  223 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            6799999999987752    22  99999999999886421100             0000  00011347899999999


Q ss_pred             HHHHhcCCC--CCCCeEEEEe
Q 022495          259 AVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++.++..+.  ..|+++++.+
T Consensus       224 v~~l~s~~~~~~tG~~i~vdG  244 (264)
T 2dtx_A          224 VAFLASREASFITGTCLYVDG  244 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCchhcCCCCcEEEECC
Confidence            999887542  3566777655

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.92  E-value=4.7e-25  Score=188.98  Aligned_cols=202  Identities=14%  Similarity=0.109  Sum_probs=140.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+...    ....++.++.+|++| .+++.++++.    
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA-PPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999766543221    124678999999999 7777766642    


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||........    +.+..             +.+++.+++.+.++||++||...+..            
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------  170 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG------------  170 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT------------
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC------------
Confidence              499999999965432211    11111             44555555555679999999875432            


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-----ee--cccCccccCCcCHHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----IM--ETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-----~~--~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      ......|+.+|++.+.+.+       ..|+++++|+||.+.++......     ..  .........+.+++|+|++++.
T Consensus       171 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~f  250 (277)
T 4fc7_A          171 QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY  250 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence            2235679999999998765       25899999999999986311100     00  0001111346789999999998


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++....  ..|+++++.+
T Consensus       251 L~s~~~~~itG~~i~vdG  268 (277)
T 4fc7_A          251 LASPLASYVTGAVLVADG  268 (277)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HcCCccCCcCCCEEEECC
Confidence            887432  3566666654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.92  E-value=4.2e-24  Score=181.89  Aligned_cols=203  Identities=14%  Similarity=0.121  Sum_probs=141.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc-----CCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      +++++|++|||||+|+||+++++.|+++|++|++++|+.++..+...     ....++.++.+|++| .+++.++++.  
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~   82 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD-ALQVRAFAEACE   82 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC-HHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999876543221     123358999999999 7777666542  


Q ss_pred             ----CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 ----DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                          ++|+||||||.......    .+.+..             +.+++.+++.+.++||++||...+...         
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  153 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE---------  153 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC---------
Confidence                49999999997543211    111111             566666677767899999998765322         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee------ec---------c-cCccccCCc
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII------ME---------T-EDTLYEGTI  250 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~------~~---------~-~~~~~~~~i  250 (296)
                         .....|+.+|++.+.+.+       ..|++++.|+||.+.++.......      ..         . .......+.
T Consensus       154 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  230 (265)
T 3lf2_A          154 ---PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLG  230 (265)
T ss_dssp             ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCB
T ss_pred             ---CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCc
Confidence               235679999999998765       258999999999998863211100      00         0 001123467


Q ss_pred             CHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          251 SRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       251 ~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++|+|++++.++....  ..|+++++.+
T Consensus       231 ~pedvA~~v~fL~s~~~~~itG~~i~vdG  259 (265)
T 3lf2_A          231 KPIEAARAILFLASPLSAYTTGSHIDVSG  259 (265)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred             CHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence            89999999998886432  3455565544

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.92  E-value=1.1e-24  Score=185.22  Aligned_cols=210  Identities=12%  Similarity=0.090  Sum_probs=143.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|+|+||||+|+||++++++|+++|++|++++|+..+..+...    ....++.++.+|++| .+++.++++.   
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~   88 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDA   88 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC-HHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999997654332111    113578999999999 7877766542   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc----chhH----H---------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhh
Q 022495          135 ---DSEAVVCATGFQPGWDLF----APWK----A---------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~----~~~~----~---------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                         ++|+||||||........    ..+.    .         +.+++.+++.+ .++||++||..++....+.     .
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----~  163 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-----L  163 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-----T
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-----c
Confidence               499999999975432111    1111    0         44455555544 4799999998765432110     0


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      .+..+...|+.+|++.+.+++.       .++++++|+||.++++......  ...  ........+.+++|+|++++.+
T Consensus       164 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (265)
T 1h5q_A          164 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILL  243 (265)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHH
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhh
Confidence            1223467899999999987752       4899999999999987533210  000  0001113478999999999998


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +..+.  ..++.+++.+
T Consensus       244 ~~~~~~~~~G~~~~v~g  260 (265)
T 1h5q_A          244 LSDHATYMTGGEYFIDG  260 (265)
T ss_dssp             HSGGGTTCCSCEEEECT
T ss_pred             ccCchhcCcCcEEEecC
Confidence            87643  4577787765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=8.1e-24  Score=181.44  Aligned_cols=193  Identities=17%  Similarity=0.217  Sum_probs=137.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc-----CCCCCeEEEEcccCCChHHHHHHhc----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIG----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~----  133 (296)
                      ++++|++|||||+|+||+++++.|+++|++|++++|++++..+...     .....+.++.+|++| .+++.++++    
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~  107 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRS  107 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC-HHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999766543221     012458889999999 888777665    


Q ss_pred             ---CCCCEEEEcCCCCCCCCC----cchhH-------------HHHHHHHHHHcCC--CEEEEEccceeccCccCccCCh
Q 022495          134 ---DDSEAVVCATGFQPGWDL----FAPWK-------------AINLVEACRKRGV--NRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       134 ---~~~d~vv~~ag~~~~~~~----~~~~~-------------~~~~l~~~~~~~~--~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                         + +|+||||||.......    ...+.             .+.+++.+++.+.  ++||++||..++...       
T Consensus       108 ~~g~-iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~-------  179 (279)
T 1xg5_A          108 QHSG-VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL-------  179 (279)
T ss_dssp             HHCC-CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC-------
T ss_pred             hCCC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC-------
Confidence               5 9999999996542211    11111             1778888888875  799999999765321       


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH---------HhCCcEEEEecCcccCCCCCCcee----ecccCccccCCcCHHHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGNII----METEDTLYEGTISRDQVAEV  258 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~---------~~~~~~~~lrp~~i~g~~~~~~~~----~~~~~~~~~~~i~~~Dva~~  258 (296)
                         +..+...|+.+|++.+.+.+         ..++++++|+||++.++.......    ..........+++++|+|++
T Consensus       180 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~  256 (279)
T 1xg5_A          180 ---PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEA  256 (279)
T ss_dssp             ---SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHH
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHH
Confidence               12335679999999987653         347999999999998864211000    00000011247899999999


Q ss_pred             HHHHhcCCC
Q 022495          259 AVEALLHPE  267 (296)
Q Consensus       259 i~~~l~~~~  267 (296)
                      ++.++..+.
T Consensus       257 i~~l~~~~~  265 (279)
T 1xg5_A          257 VIYVLSTPA  265 (279)
T ss_dssp             HHHHHHSCT
T ss_pred             HHHHhcCCc
Confidence            999998764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.92  E-value=1.3e-23  Score=179.97  Aligned_cols=202  Identities=15%  Similarity=0.162  Sum_probs=141.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-------------cchhhhc---ccCCCCCeEEEEcccCCChH
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-------------LDKAKTT---LSKDNPSLQIVKADVTEGSA  126 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-------------~~~~~~~---~~~~~~~~~~~~~D~~d~~~  126 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+             .+...+.   +.....++.++.+|++| .+
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~   86 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD-FD   86 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HH
Confidence            4678999999999999999999999999999999983             3332221   11234679999999999 88


Q ss_pred             HHHHHhcC------CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceecc
Q 022495          127 KLSEAIGD------DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNG  182 (296)
Q Consensus       127 ~~~~~~~~------~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~  182 (296)
                      ++.++++.      ++|+||||||+.......    +.+..             +.+++.+++.+ .++||++||...+.
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            77766542      499999999976432211    11111             66666677765 57999999997654


Q ss_pred             CccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---------ec-----c
Q 022495          183 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---------ME-----T  241 (296)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---------~~-----~  241 (296)
                      ..            .....|+.+|++.+.+.+       ..|++++.|+||.+.++.......         ..     .
T Consensus       167 ~~------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  234 (277)
T 3tsc_A          167 MQ------------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVL  234 (277)
T ss_dssp             CC------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTT
T ss_pred             CC------------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHh
Confidence            32            124679999999998775       258999999999999875432100         00     0


Q ss_pred             cCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          242 EDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       242 ~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      .......+.+++|+|++++.++....  ..|+++++.+
T Consensus       235 ~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  272 (277)
T 3tsc_A          235 TPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQ  272 (277)
T ss_dssp             CCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCC
Confidence            01111236889999999998886543  3566666654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.92  E-value=9.3e-25  Score=185.24  Aligned_cols=198  Identities=14%  Similarity=0.126  Sum_probs=136.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      .|++|++|||||+++||+++|+.|+++|++|++.+|+.+.+.+.......++..+++|++| .++++++++.      ++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSAN-LAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999999887766544345678999999999 7776665543      49


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||........    +.+..             +.+++.|++.  ++||++||...+...            ...
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~~------------~~~  170 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGT------------PAF  170 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSCC------------TTC
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccCC------------CCc
Confidence            9999999975432211    12221             5555555443  589999998754321            124


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc----------cCcc-ccCCcCHHHHHHHHHH
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET----------EDTL-YEGTISRDQVAEVAVE  261 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~----------~~~~-~~~~i~~~Dva~~i~~  261 (296)
                      ..|+++|+++..+.+       .+||+++.|.||.+.++.........+          .... ...+..++|+|.+++.
T Consensus       171 ~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~F  250 (273)
T 4fgs_A          171 SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            679999999998775       368999999999998875332211000          0001 1235689999999887


Q ss_pred             HhcCCC--CCCCeEEE
Q 022495          262 ALLHPE--SSYKVVEI  275 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i  275 (296)
                      ++.+..  ..|+++.+
T Consensus       251 LaSd~a~~iTG~~i~V  266 (273)
T 4fgs_A          251 LASDDSSFVTGAELFV  266 (273)
T ss_dssp             HHSGGGTTCCSCEEEE
T ss_pred             HhCchhcCccCCeEeE
Confidence            775432  23444444

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.92  E-value=3.5e-23  Score=173.03  Aligned_cols=193  Identities=19%  Similarity=0.256  Sum_probs=137.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+.++..+...    ....++.++.+|++| .+++.++++.      +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK-AESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC-HHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999999999999999876543221    134679999999999 8888877763      4


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    .+.+..             +.+++.+++.+ +++|++||...+...            ..
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~------------~~  147 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-GLALVTTSDVSARLI------------PY  147 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSCC------------TT
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcEEEEecchhcccC------------CC
Confidence            9999999997543221    111111             55555554444 578888877543221            12


Q ss_pred             hHHHHHHHHHHHHHHHH-----hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeE
Q 022495          199 FGLTLIAKLQAEQYIRK-----SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVV  273 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~  273 (296)
                      ...|+.+|++.+.+.+.     .++++++|+||.+.++.......    ......+++++|+|++++.++..+.. ..+.
T Consensus       148 ~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~----~~~~~~~~~p~dva~~v~~l~~~~~~-~~~~  222 (235)
T 3l77_A          148 GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG----KPKEKGYLKPDEIAEAVRCLLKLPKD-VRVE  222 (235)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC----CCGGGTCBCHHHHHHHHHHHHTSCTT-CCCC
T ss_pred             cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC----cccccCCCCHHHHHHHHHHHHcCCCC-Cccc
Confidence            45799999999987753     58999999999999876433211    11123578999999999999987764 3344


Q ss_pred             EEEe
Q 022495          274 EIIS  277 (296)
Q Consensus       274 ~i~~  277 (296)
                      ++.-
T Consensus       223 ~~~~  226 (235)
T 3l77_A          223 ELML  226 (235)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            4443

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.92  E-value=1.2e-24  Score=184.20  Aligned_cols=202  Identities=15%  Similarity=0.128  Sum_probs=140.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhc-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      ++++|+|+||||+|+||++++++|+++|++|++++|+ +++..+..   .....++.++.+|++| .+++.++++     
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   82 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT-SEACQQLVDEFVAK   82 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999998 65544321   1124578999999999 888887776     


Q ss_pred             --CCCCEEEEcCCC-CCCCCC----cchhH----H---------HHHHHHHHHcC--C---CEEEEEccceeccCccCcc
Q 022495          134 --DDSEAVVCATGF-QPGWDL----FAPWK----A---------INLVEACRKRG--V---NRFILISSILVNGAAMGQI  188 (296)
Q Consensus       134 --~~~d~vv~~ag~-~~~~~~----~~~~~----~---------~~~l~~~~~~~--~---~~iV~~SS~~~~~~~~~~~  188 (296)
                        + +|+||||||. ......    ...+.    .         +.+++.+++.+  .   ++||++||...+..     
T Consensus        83 ~g~-id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----  156 (258)
T 3afn_B           83 FGG-IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-----  156 (258)
T ss_dssp             HSS-CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-----
T ss_pred             cCC-CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-----
Confidence              5 9999999996 322111    01111    0         44555555433  2   69999999865531     


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHH
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAE  257 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~  257 (296)
                            +..+...|+.+|++.+.+.+.       .++++++|+||.++++......  ...  ........+++++|+|+
T Consensus       157 ------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (258)
T 3afn_B          157 ------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAP  230 (258)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHH
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHH
Confidence                  112356799999999987652       4899999999999987533210  000  00111234789999999


Q ss_pred             HHHHHhcCCC---CCCCeEEEEe
Q 022495          258 VAVEALLHPE---SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~---~~~~~~~i~~  277 (296)
                      +++.++..+.   ..++++++.+
T Consensus       231 ~~~~l~~~~~~~~~~G~~~~v~g  253 (258)
T 3afn_B          231 AFLFFASHLASGYITGQVLDING  253 (258)
T ss_dssp             HHHHHHCHHHHTTCCSEEEEEST
T ss_pred             HHHHHhCcchhccccCCEEeECC
Confidence            9999887542   2567787765

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.92  E-value=7.6e-24  Score=179.32  Aligned_cols=201  Identities=12%  Similarity=0.032  Sum_probs=133.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC---CCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---DSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~d~vv~~  142 (296)
                      ||+|+||||+|+||+++++.|+++|++|++++|++++...         . +.+|++| .+++.++++.   ++|+||||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~-~~~Dl~~-~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------D-LSTAEGR-KQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------C-TTSHHHH-HHHHHHHHTTCTTCCSEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------c-cccCCCC-HHHHHHHHHHhCCCCCEEEEC
Confidence            3689999999999999999999999999999998765321         1 6789999 8888888754   37999999


Q ss_pred             CCCCC-CCCCcchhHH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh----------------hhhh
Q 022495          143 TGFQP-GWDLFAPWKA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA----------------YIFL  196 (296)
Q Consensus       143 ag~~~-~~~~~~~~~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~----------------~~~~  196 (296)
                      ||... ..........         +.+++.+++.+.++||++||..++.........+.                ..+.
T Consensus        70 Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (257)
T 1fjh_A           70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ  149 (257)
T ss_dssp             CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT
T ss_pred             CCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCC
Confidence            99754 2211111111         55666666777789999999987732111110000                0123


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---ecc-c---CccccCCcCHHHHHHHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---MET-E---DTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~~~-~---~~~~~~~i~~~Dva~~i~~~  262 (296)
                      .+...|+.+|.+.+.+.+       ..++++++|+||.+.++.......   ... .   ......+.+++|+|++++.+
T Consensus       150 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l  229 (257)
T 1fjh_A          150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFL  229 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHH
Confidence            457789999999998774       258999999999999875432200   000 0   11112478999999999999


Q ss_pred             hcCC--CCCCCeEEEEe
Q 022495          263 LLHP--ESSYKVVEIIS  277 (296)
Q Consensus       263 l~~~--~~~~~~~~i~~  277 (296)
                      +..+  ...|+.+.+.+
T Consensus       230 ~~~~~~~~tG~~~~vdg  246 (257)
T 1fjh_A          230 MSPAASYVHGAQIVIDG  246 (257)
T ss_dssp             TSGGGTTCCSCEEEEST
T ss_pred             hCchhcCCcCCEEEECC
Confidence            8765  23466666654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.92  E-value=4.8e-24  Score=180.34  Aligned_cols=200  Identities=14%  Similarity=0.101  Sum_probs=136.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcc--hhhhcccC-CCCCeEEEEcccCCCh-HHHHHHhc----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLD--KAKTTLSK-DNPSLQIVKADVTEGS-AKLSEAIG----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~d~~-~~~~~~~~----  133 (296)
                      ++++|+++||||+|+||++++++|+++|++ |++++|+..  ...++... ...++.++.+|++| . +++.++++    
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   80 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV-PVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS-CHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC-ChHHHHHHHHHHHH
Confidence            457899999999999999999999999997 999999863  22222111 13468899999999 6 66665554    


Q ss_pred             ---CCCCEEEEcCCCCCCCCCcchhHH---------HHHHHHHHHcC---CCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          134 ---DDSEAVVCATGFQPGWDLFAPWKA---------INLVEACRKRG---VNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       134 ---~~~d~vv~~ag~~~~~~~~~~~~~---------~~~l~~~~~~~---~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                         + +|+||||||.....+.......         +.+++.+++.+   .++||++||...+...            ..
T Consensus        81 ~~g~-id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~  147 (254)
T 1sby_A           81 QLKT-VDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------------HQ  147 (254)
T ss_dssp             HHSC-CCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------TT
T ss_pred             hcCC-CCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC------------CC
Confidence               5 9999999997533222111111         44455554442   4689999999776432            22


Q ss_pred             hHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecc-cC---c--cccCCcCHHHHHHHHHHHhcC
Q 022495          199 FGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMET-ED---T--LYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~-~~---~--~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ...|+.+|++.+.+.+.       .++++++|+||.+.++.......... ..   .  ......+++|+|++++.++..
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~~  227 (254)
T 1sby_A          148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA  227 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHHc
Confidence            46799999999987642       68999999999998864221100000 00   0  012345899999999998864


Q ss_pred             CCCCCCeEEEEe
Q 022495          266 PESSYKVVEIIS  277 (296)
Q Consensus       266 ~~~~~~~~~i~~  277 (296)
                       ...++++++.+
T Consensus       228 -~~~G~~~~v~g  238 (254)
T 1sby_A          228 -NKNGAIWKLDL  238 (254)
T ss_dssp             -CCTTCEEEEET
T ss_pred             -CCCCCEEEEeC
Confidence             34577888765

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.92  E-value=1.3e-24  Score=186.18  Aligned_cols=202  Identities=17%  Similarity=0.172  Sum_probs=140.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.     
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERY   97 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999999986654322   1124578999999999 8877766651     


Q ss_pred             -CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHH--HHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF----APWKA-------------INLVEA--CRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~--~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                       ++|+||||||........    ..+..             +.+++.  +++.+.++||++||...+...          
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------  167 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV----------  167 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC----------
Confidence             399999999975432111    11111             334444  555566899999998754321          


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee---e------cc------cCccccCCcCH
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII---M------ET------EDTLYEGTISR  252 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~---~------~~------~~~~~~~~i~~  252 (296)
                        .+...|+.+|++.+.+.+.       .++++++|+||.+.++.......   .      ..      .......++++
T Consensus       168 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  245 (277)
T 2rhc_B          168 --VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP  245 (277)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCH
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCH
Confidence              2246799999999987652       48999999999999864211100   0      00      00011347899


Q ss_pred             HHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          253 DQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|+|++++.++..+.  ..++++++.+
T Consensus       246 ~dvA~~v~~l~s~~~~~~tG~~~~vdG  272 (277)
T 2rhc_B          246 SEVAEMVAYLIGPGAAAVTAQALNVCG  272 (277)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCchhcCCCCcEEEECC
Confidence            999999999887542  3567777765

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.92  E-value=8.9e-24  Score=178.13  Aligned_cols=198  Identities=18%  Similarity=0.218  Sum_probs=135.6

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCCEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSEAVV  140 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d~vv  140 (296)
                      |+++||||+|+||+++++.|+++|++|++++|++++..+.......++.++.+|++| .+++.++++.      ++|+||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence            589999999999999999999999999999999876554332112478999999999 8888887752      499999


Q ss_pred             EcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          141 CATGFQPGWDL-----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       141 ~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      ||||+......     .+.+..             +.+++.|++.+.++||++||...+...            .+...|
T Consensus        80 nnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~~Y  147 (248)
T 3asu_A           80 NNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY------------AGGNVY  147 (248)
T ss_dssp             ECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------TTCHHH
T ss_pred             ECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC------------CCCchH
Confidence            99997531111     111111             566677767777899999998765321            225679


Q ss_pred             HHHHHHHHHHHHH-------hCCcEEEEecCccc-CCCCCCceeecc--cCcc--ccCCcCHHHHHHHHHHHhcCCC-CC
Q 022495          203 LIAKLQAEQYIRK-------SGINYTIIRPGGLR-NEPPTGNIIMET--EDTL--YEGTISRDQVAEVAVEALLHPE-SS  269 (296)
Q Consensus       203 ~~sK~~~e~~~~~-------~~~~~~~lrp~~i~-g~~~~~~~~~~~--~~~~--~~~~i~~~Dva~~i~~~l~~~~-~~  269 (296)
                      +.+|++.+.+.+.       .|+++++|+||.+. ++..........  ....  ...+++++|+|++++.++..+. ..
T Consensus       148 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~~~~~  227 (248)
T 3asu_A          148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVN  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHSCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCCccce
Confidence            9999999987652       48999999999999 664321110000  0010  1235799999999999987653 34


Q ss_pred             CCeEEEEe
Q 022495          270 YKVVEIIS  277 (296)
Q Consensus       270 ~~~~~i~~  277 (296)
                      +..+.+..
T Consensus       228 g~~i~v~~  235 (248)
T 3asu_A          228 INTLEMMP  235 (248)
T ss_dssp             CCEEEECC
T ss_pred             eeEEEEcc
Confidence            44555543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=1e-23  Score=176.78  Aligned_cols=189  Identities=17%  Similarity=0.163  Sum_probs=136.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc------CCCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DDSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------~~~d~v  139 (296)
                      +|+++||||+|+||++++++|+++|++|++++|+++ .        .++.++.+|++| .+++.++++      + +|+|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------~~~~~~~~D~~~-~~~~~~~~~~~~~~~~-~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------EDLIYVEGDVTR-EEDVRRAVARAQEEAP-LFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------SSSEEEECCTTC-HHHHHHHHHHHHHHSC-EEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------cceEEEeCCCCC-HHHHHHHHHHHHhhCC-ceEE
Confidence            689999999999999999999999999999999875 1        356899999999 888888776      5 9999


Q ss_pred             EEcCCCCCCCCCc----c----hhHH---------HHHHHH----HHHcC------CCEEEEEccceeccCccCccCChh
Q 022495          140 VCATGFQPGWDLF----A----PWKA---------INLVEA----CRKRG------VNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       140 v~~ag~~~~~~~~----~----~~~~---------~~~l~~----~~~~~------~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                      |||||........    .    .+..         .+++++    +++.+      .++||++||..++...        
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  142 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ--------  142 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC--------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--------
Confidence            9999975432111    0    1111         344444    43332      2399999999766432        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCcee-----ecccCccccCCcCHHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNII-----METEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~-----~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                          .+...|+.+|++.+.+.+.       .++++++|+||.++++.......     ..........+++++|+|++++
T Consensus       143 ----~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  218 (242)
T 1uay_A          143 ----IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVL  218 (242)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHH
T ss_pred             ----CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHH
Confidence                2356799999999877642       48999999999999864222100     0001111134689999999999


Q ss_pred             HHhcCCCCCCCeEEEEe
Q 022495          261 EALLHPESSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~~~~~~~~i~~  277 (296)
                      .++.++...++.+++.+
T Consensus       219 ~l~~~~~~~G~~~~v~g  235 (242)
T 1uay_A          219 HILENPMLNGEVVRLDG  235 (242)
T ss_dssp             HHHHCTTCCSCEEEEST
T ss_pred             HHhcCCCCCCcEEEEcC
Confidence            99987556678888766

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.92  E-value=4.7e-24  Score=182.59  Aligned_cols=200  Identities=16%  Similarity=0.135  Sum_probs=135.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-CcchhhhcccC---C-CCCeEEEEcccCCCh----HHHHHHhc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTLSK---D-NPSLQIVKADVTEGS----AKLSEAIG  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~---~-~~~~~~~~~D~~d~~----~~~~~~~~  133 (296)
                      .+++|+++||||+|+||+++++.|+++|++|++++| ++++..+....   . ..++.++.+|++| .    +.+.++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL-SSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-STTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC-ccccHHHHHHHHH
Confidence            356899999999999999999999999999999999 76654432211   1 3578999999999 7    77776664


Q ss_pred             -------CCCCEEEEcCCCCCCCCCc---------------chhHH---------HHHHHHHHH---cCC------CEEE
Q 022495          134 -------DDSEAVVCATGFQPGWDLF---------------APWKA---------INLVEACRK---RGV------NRFI  173 (296)
Q Consensus       134 -------~~~d~vv~~ag~~~~~~~~---------------~~~~~---------~~~l~~~~~---~~~------~~iV  173 (296)
                             + +|+||||||+.......               ..+..         .++++++..   .+.      ++||
T Consensus        87 ~~~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv  165 (276)
T 1mxh_A           87 CSFRAFGR-CDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHHHSC-CCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred             HHHHhcCC-CCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence                   5 99999999975322111               11111         445555444   344      7999


Q ss_pred             EEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc-eeec-c-cC
Q 022495          174 LISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN-IIME-T-ED  243 (296)
Q Consensus       174 ~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~-~~~~-~-~~  243 (296)
                      ++||...+...            .+...|+.+|++++.+.+       ..|+++++|+||.+.++ ..-. .... . ..
T Consensus       166 ~isS~~~~~~~------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~  232 (276)
T 1mxh_A          166 NLCDAMTDLPL------------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRK  232 (276)
T ss_dssp             EECCGGGGSCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHHTT
T ss_pred             EECchhhcCCC------------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHHhc
Confidence            99999765422            235679999999998764       24899999999999997 2100 0000 0 00


Q ss_pred             ccccC-CcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          244 TLYEG-TISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       244 ~~~~~-~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ..... +.+++|+|++++.++..+.  ..|+++++.+
T Consensus       233 ~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  269 (276)
T 1mxh_A          233 VPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDG  269 (276)
T ss_dssp             CTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            11123 7899999999999887533  2466777654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.92  E-value=4.4e-24  Score=182.35  Aligned_cols=201  Identities=16%  Similarity=0.199  Sum_probs=140.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-Ccchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhc----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG----  133 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~----  133 (296)
                      +++++|+|+||||+|+||++++++|+++|++|++++| +++...+..   .....++.++.+|++| .+.+.++++    
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~   95 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK-PSEVVALFDKAVS   95 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999 554443221   1124578999999999 888877775    


Q ss_pred             ---CCCCEEEEcCCCCCCCCCc----chhHH---------HHHHHHHHHc---CCCEEEEEccceec-cCccCccCChhh
Q 022495          134 ---DDSEAVVCATGFQPGWDLF----APWKA---------INLVEACRKR---GVNRFILISSILVN-GAAMGQILNPAY  193 (296)
Q Consensus       134 ---~~~d~vv~~ag~~~~~~~~----~~~~~---------~~~l~~~~~~---~~~~iV~~SS~~~~-~~~~~~~~~~~~  193 (296)
                         + +|+||||||........    ..+..         .++++++.+.   + ++||++||..++ ...         
T Consensus        96 ~~~~-~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~---------  164 (274)
T 1ja9_A           96 HFGG-LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI---------  164 (274)
T ss_dssp             HHSC-EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC---------
T ss_pred             HcCC-CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC---------
Confidence               5 99999999975432110    11111         4555555443   4 699999999876 322         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCC-----------cee-ec-----ccCccccCC
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTG-----------NII-ME-----TEDTLYEGT  249 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~-----------~~~-~~-----~~~~~~~~~  249 (296)
                         .+...|+.+|++.|.+++.       .++++++++||.++++....           ... ..     ........+
T Consensus       165 ---~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (274)
T 1ja9_A          165 ---PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRI  241 (274)
T ss_dssp             ---CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSC
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCc
Confidence               1245699999999987752       48999999999998863220           000 00     000112347


Q ss_pred             cCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          250 ISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       250 i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++++|+|++++.++..+.  ..++++++.+
T Consensus       242 ~~~~dva~~i~~l~~~~~~~~~G~~~~v~g  271 (274)
T 1ja9_A          242 GYPADIGRAVSALCQEESEWINGQVIKLTG  271 (274)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCcccccccCcEEEecC
Confidence            899999999999987643  2577888765

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.91  E-value=1.3e-23  Score=182.18  Aligned_cols=192  Identities=14%  Similarity=0.154  Sum_probs=137.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.++..+..   .....++.++.+|++| .+++.++++.     
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH-LDEMVRLADEAFRLL  106 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhC
Confidence            367899999999999999999999999999999999987665432   1234679999999999 8887776651     


Q ss_pred             -CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||+.......    +.+..             +.+++.+++.+ .++||++||...+...           
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  175 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN-----------  175 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-----------
Confidence             399999999975432111    11111             55666667666 5799999999765322           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-------ee--c-----ccCccccCCcCHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-------IM--E-----TEDTLYEGTISRDQ  254 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-------~~--~-----~~~~~~~~~i~~~D  254 (296)
                       .....|+.+|++.+.+.+       ..|+++++|+||.+.++......       ..  .     ........+++++|
T Consensus       176 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ped  254 (301)
T 3tjr_A          176 -AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADD  254 (301)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHH
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHH
Confidence             235679999999987764       25899999999999886422100       00  0     00011134789999


Q ss_pred             HHHHHHHHhcCCC
Q 022495          255 VAEVAVEALLHPE  267 (296)
Q Consensus       255 va~~i~~~l~~~~  267 (296)
                      +|++++.++..+.
T Consensus       255 vA~~i~~~l~~~~  267 (301)
T 3tjr_A          255 VARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCC
Confidence            9999999998653

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.91  E-value=8.4e-24  Score=178.72  Aligned_cols=205  Identities=14%  Similarity=0.144  Sum_probs=140.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEccc--CCChHHHHHHhcC--
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADV--TEGSAKLSEAIGD--  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~--~d~~~~~~~~~~~--  134 (296)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...    ....++.++.+|+  +| .+.+.++++.  
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~   87 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT-SENCQQLAQRIA   87 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCC-HHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCC-HHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999876554321    1123789999999  88 7776665542  


Q ss_pred             ----CCCEEEEcCCCCCCC---CCc--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          135 ----DSEAVVCATGFQPGW---DLF--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~---~~~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                          ++|+||||||.....   ...  +.+..             +.+++.+++.+.++||++||...+...        
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  159 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR--------  159 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC--------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC--------
Confidence                499999999974321   111  11111             666777787777899999998765322        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHH----h--CCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIRK----S--GINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~~----~--~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                          .....|+.+|++.+.+.+.    .  .++++.|.||.+.++.....  ..  ......+.+++|+|++++.++...
T Consensus       160 ----~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~--~~--~~~~~~~~~p~dva~~~~~L~s~~  231 (252)
T 3f1l_A          160 ----ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASA--FP--TEDPQKLKTPADIMPLYLWLMGDD  231 (252)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHH--CT--TCCGGGSBCTGGGHHHHHHHHSGG
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhh--CC--ccchhccCCHHHHHHHHHHHcCcc
Confidence                2256799999999987652    2  39999999999988532111  00  111234678999999998888754


Q ss_pred             C--CCCCeEEEEeCCCCCCCCHH
Q 022495          267 E--SSYKVVEIISRVDAPKRSYE  287 (296)
Q Consensus       267 ~--~~~~~~~i~~~~~~~~~~~~  287 (296)
                      .  ..|+++++.+   |...++.
T Consensus       232 ~~~itG~~i~vdg---G~~~~~~  251 (252)
T 3f1l_A          232 SRRKTGMTFDAQP---GRKPGIS  251 (252)
T ss_dssp             GTTCCSCEEESSC---C------
T ss_pred             ccCCCCCEEEeCC---CcCCCCC
Confidence            3  3455555544   6665554

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.91  E-value=1.2e-23  Score=179.79  Aligned_cols=191  Identities=16%  Similarity=0.205  Sum_probs=133.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      +|+ |++|||||+|+||+++++.|+++|++|++++|++++..+....  ...++.++.+|++| .+.+.++++.      
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRD-RAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHTCCGGGS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence            445 8999999999999999999999999999999998765543211  11478999999999 8888887754      


Q ss_pred             CCCEEEEcCCCCCC-CCC----cchhHH-------------HHHHHHHHHcCCC-EEEEEccceeccCccCccCChhhhh
Q 022495          135 DSEAVVCATGFQPG-WDL----FAPWKA-------------INLVEACRKRGVN-RFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ~~d~vv~~ag~~~~-~~~----~~~~~~-------------~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      ++|+||||||.... ...    .+.+..             +.+++.|++.+.+ +||++||...+...           
T Consensus        97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~-----------  165 (272)
T 2nwq_A           97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY-----------  165 (272)
T ss_dssp             SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC-----------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC-----------
Confidence            47999999997542 111    111111             6777888787777 99999998765321           


Q ss_pred             hhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecc--cCcc--ccCCcCHHHHHHHHHHHhc
Q 022495          196 LNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMET--EDTL--YEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~--~~~~--~~~~i~~~Dva~~i~~~l~  264 (296)
                       .....|+.+|++.+.+.+.       .|+++++|+||.+.++..........  ....  ...+++++|+|++++.++.
T Consensus       166 -~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s  244 (272)
T 2nwq_A          166 -PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMN  244 (272)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHHHHT
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhC
Confidence             2246799999999988753       58999999999999875322110000  0000  1135899999999999997


Q ss_pred             CCC
Q 022495          265 HPE  267 (296)
Q Consensus       265 ~~~  267 (296)
                      .+.
T Consensus       245 ~~~  247 (272)
T 2nwq_A          245 QPA  247 (272)
T ss_dssp             SCT
T ss_pred             CCc
Confidence            643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.91  E-value=2.2e-23  Score=179.75  Aligned_cols=203  Identities=11%  Similarity=0.121  Sum_probs=142.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh----hcccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK----TTLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.+...    +.......++.++.+|++| .+++.++++.   
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~  121 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD-EQHCKDIVQETVR  121 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS-HHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999875422    2222245689999999999 7877766642   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc-----chhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 ---DSEAVVCATGFQPGWDLF-----APWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~-----~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                         ++|+||||||........     +.+..         .++++++...  +.++||++||...+...           
T Consensus       122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------  190 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN-----------  190 (291)
T ss_dssp             HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC-----------
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC-----------
Confidence               399999999975432211     11111         5566666543  24599999998765432           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce----e-ecccCccccCCcCHHHHHHHHHHHh
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI----I-METEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~----~-~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                       .....|+.+|++.+.+.+       ..|+++++|+||.++++......    . ..........+.+++|+|++++.++
T Consensus       191 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~  269 (291)
T 3ijr_A          191 -ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLA  269 (291)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHH
T ss_pred             -CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHh
Confidence             224679999999998765       24899999999999987421110    0 0001111234678999999999888


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..|+++++.+
T Consensus       270 s~~~~~itG~~i~vdG  285 (291)
T 3ijr_A          270 SSDSSYVTGQMIHVNG  285 (291)
T ss_dssp             SGGGTTCCSCEEEESS
T ss_pred             CCccCCCcCCEEEECC
Confidence            6543  4567777755

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.91  E-value=2e-23  Score=180.72  Aligned_cols=202  Identities=14%  Similarity=0.104  Sum_probs=141.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc------------chhhhc---ccCCCCCeEEEEcccCCChHH
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL------------DKAKTT---LSKDNPSLQIVKADVTEGSAK  127 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~------------~~~~~~---~~~~~~~~~~~~~D~~d~~~~  127 (296)
                      ++++|++|||||+|+||+++++.|+++|++|++++|++            +...+.   +.....++.++.+|++| .++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~  103 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD-FDA  103 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC-HHH
Confidence            46789999999999999999999999999999999873            222221   11234679999999999 887


Q ss_pred             HHHHhcC------CCCEEEEcCCCCCCCC-----CcchhHH-------------HHHHHHHHHcC-CCEEEEEccceecc
Q 022495          128 LSEAIGD------DSEAVVCATGFQPGWD-----LFAPWKA-------------INLVEACRKRG-VNRFILISSILVNG  182 (296)
Q Consensus       128 ~~~~~~~------~~d~vv~~ag~~~~~~-----~~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~  182 (296)
                      +.++++.      ++|+||||||+.....     ..+.+..             +.+++.+++.+ .++||++||...+.
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~  183 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR  183 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence            7776642      4999999999754322     1111111             55666665554 67999999987653


Q ss_pred             CccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee----ec-----------
Q 022495          183 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----ME-----------  240 (296)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~----~~-----------  240 (296)
                      ..            .....|+.+|++++.+.+       ..|+++++|+||.+.++.......    ..           
T Consensus       184 ~~------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  251 (299)
T 3t7c_A          184 GA------------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQ  251 (299)
T ss_dssp             CC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred             CC------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHH
Confidence            22            225679999999998765       248999999999999986442110    00           


Q ss_pred             ----ccCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          241 ----TEDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       241 ----~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                          ........+.+++|+|++++.++....  ..|+++++.+
T Consensus       252 ~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  294 (299)
T 3t7c_A          252 VASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDG  294 (299)
T ss_dssp             HHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence                000111346799999999998886543  3566776654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.91  E-value=1.1e-23  Score=182.03  Aligned_cols=203  Identities=14%  Similarity=0.130  Sum_probs=139.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc--hhh---hcccCCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~--~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++|+..  ...   +.......++.++.+|++| .+++.++++.  
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~  123 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSD-ESFARSLVHKAR  123 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTS-HHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHH
Confidence            4678999999999999999999999999999999988733  121   1222234678999999999 7777666541  


Q ss_pred             ----CCCEEEEcCCCCCCCCC-----cchhHH---------HHHHHHHHHcC--CCEEEEEccceeccCccCccCChhhh
Q 022495          135 ----DSEAVVCATGFQPGWDL-----FAPWKA---------INLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~-----~~~~~~---------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                          ++|+||||||.......     .+.+..         .++++++...-  .++||++||...+...          
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~----------  193 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS----------  193 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC----------
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC----------
Confidence                49999999997542211     111111         55556554432  2599999999876532          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC-----ceeec-ccCccccCCcCHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG-----NIIME-TEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~-----~~~~~-~~~~~~~~~i~~~Dva~~i~~  261 (296)
                        .....|+.+|++.+.+.+       ..|+++++|+||.+.++....     ..... ........+.+++|+|++++.
T Consensus       194 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  271 (294)
T 3r3s_A          194 --PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVY  271 (294)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHH
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence              225679999999998764       248999999999999864110     00000 011112346789999999998


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++....  ..|+++++.+
T Consensus       272 L~s~~~~~itG~~i~vdG  289 (294)
T 3r3s_A          272 LASQESSYVTAEVHGVCG  289 (294)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhCccccCCCCCEEEECC
Confidence            886533  3566777755

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.91  E-value=4.4e-24  Score=182.68  Aligned_cols=204  Identities=13%  Similarity=0.079  Sum_probs=144.9

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+++++|+++||||+|+||+++++.|+++|++|++++|++++..+..   .....++.++.+|++| .+.+.++++.   
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~  106 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE-AGAGTDLIERAEA  106 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS-TTHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHH
Confidence            35778999999999999999999999999999999999987654332   1135679999999999 7777666541   


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||........    +.+..             +.+++.+++.+.++||++||...+..            
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~------------  174 (275)
T 4imr_A          107 IAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP------------  174 (275)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC------------
Confidence              499999999975432211    11111             66667777777789999999876542            


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cC-c-cccCCcCHHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------ED-T-LYEGTISRDQVAEVAV  260 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~-~-~~~~~i~~~Dva~~i~  260 (296)
                      ..+...|+.+|++.+.+.+       ..++++++|+||.+.++..........      .. . ....+..++|+|++++
T Consensus       175 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  254 (275)
T 4imr_A          175 KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAAL  254 (275)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHH
Confidence            2235679999999998765       248999999999998864211100000      00 0 1234678999999999


Q ss_pred             HHhcCCC--CCCCeEEEEe
Q 022495          261 EALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~  277 (296)
                      .++....  ..|+++++.+
T Consensus       255 fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          255 FLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             HHHSGGGTTCCSCEEEESS
T ss_pred             HHcCcccCCCCCCEEEeCC
Confidence            8887533  3566666644

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=8.5e-24  Score=180.50  Aligned_cols=209  Identities=15%  Similarity=0.108  Sum_probs=141.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+... ...++.++.+|++| .+++.++++.      ++
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQ-ELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhcCCeEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999999999876554332 11358899999999 8877776642      39


Q ss_pred             CEEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |+||||||........     +.+..             +.+++.+++. .++||++||...+...            ..
T Consensus        84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~------------~~  150 (270)
T 1yde_A           84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ------------AQ  150 (270)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC------------TT
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCC------------CC
Confidence            9999999975321111     11111             4445555444 3799999998643211            12


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC------cee--ec--ccCccccCCcCHHHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG------NII--ME--TEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~------~~~--~~--~~~~~~~~~i~~~Dva~~i~~  261 (296)
                      ...|+.+|++.+.+.+       .+|+++++|+||+++++....      ...  ..  ........+.+++|+|++++.
T Consensus       151 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~  230 (270)
T 1yde_A          151 AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVF  230 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence            4579999999998765       258999999999999863211      000  00  000111236789999999988


Q ss_pred             HhcCC-CCCCCeEEEEeCCCCCCCCHHHH
Q 022495          262 ALLHP-ESSYKVVEIISRVDAPKRSYEDL  289 (296)
Q Consensus       262 ~l~~~-~~~~~~~~i~~~~~~~~~~~~el  289 (296)
                      ++.+. ...|+++.+.+   |....+.+.
T Consensus       231 L~s~~~~itG~~i~vdG---G~~~~~~~~  256 (270)
T 1yde_A          231 LASEANFCTGIELLVTG---GAELGYGCK  256 (270)
T ss_dssp             HHHHCTTCCSCEEEEST---TTTSCC---
T ss_pred             HcccCCCcCCCEEEECC---CeecccCcC
Confidence            88642 23566776655   555554443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.91  E-value=1e-23  Score=180.94  Aligned_cols=203  Identities=17%  Similarity=0.134  Sum_probs=144.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-----CC
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-----DS  136 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----~~  136 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.     ++
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~i  104 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS-EDSVLAAIEAANQLGRL  104 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHTTSSEE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhCCC
Confidence            45678999999999999999999999999999999999877665443234679999999999 8888776652     48


Q ss_pred             CEEEEc-CCCCCCCCC-------cch--hHH-------------HHHHHHHHH------cCCCEEEEEccceeccCccCc
Q 022495          137 EAVVCA-TGFQPGWDL-------FAP--WKA-------------INLVEACRK------RGVNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       137 d~vv~~-ag~~~~~~~-------~~~--~~~-------------~~~l~~~~~------~~~~~iV~~SS~~~~~~~~~~  187 (296)
                      |++||| ||.......       ...  +..             +.+++.+.+      .+.++||++||...+...   
T Consensus       105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  181 (281)
T 3ppi_A          105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ---  181 (281)
T ss_dssp             EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC---
T ss_pred             CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC---
Confidence            999999 554322111       110  111             444445544      345699999999765432   


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---e--ecccCccccCCcCHHHH
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---I--METEDTLYEGTISRDQV  255 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~--~~~~~~~~~~~i~~~Dv  255 (296)
                               .....|+.+|++.+.+.+       ..++++++|+||.+.++......   .  ..........+.+++|+
T Consensus       182 ---------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  252 (281)
T 3ppi_A          182 ---------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEF  252 (281)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHH
T ss_pred             ---------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHH
Confidence                     235679999999987764       25899999999999886322110   0  00011111347899999


Q ss_pred             HHHHHHHhcCCCCCCCeEEEEe
Q 022495          256 AEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       256 a~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      |++++.++.++...|+++++.+
T Consensus       253 A~~v~~l~s~~~~tG~~i~vdG  274 (281)
T 3ppi_A          253 ADAAAFLLTNGYINGEVMRLDG  274 (281)
T ss_dssp             HHHHHHHHHCSSCCSCEEEEST
T ss_pred             HHHHHHHHcCCCcCCcEEEECC
Confidence            9999999987666788888766

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.91  E-value=1.5e-23  Score=176.66  Aligned_cols=194  Identities=18%  Similarity=0.148  Sum_probs=135.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+        +..+.+|++| .+++.++++.      ++
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~D~~~-~~~~~~~~~~~~~~~g~i   82 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG--------LFGVEVDVTD-SDAVDRAFTAVEEHQGPV   82 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------SEEEECCTTC-HHHHHHHHHHHHHHHSSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------hcCeeccCCC-HHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999998765432        2248899999 7777766542      39


Q ss_pred             CEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |+||||||......    ..+.+..             +.+++.+++.+.++||++||...+...            ...
T Consensus        83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~  150 (247)
T 1uzm_A           83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI------------GNQ  150 (247)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------CC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC------------CCC
Confidence            99999999754211    1111111             566667777777899999998654321            124


Q ss_pred             HHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCc--eeec--ccCccccCCcCHHHHHHHHHHHhcCCC-
Q 022495          200 GLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGN--IIME--TEDTLYEGTISRDQVAEVAVEALLHPE-  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~--~~~~--~~~~~~~~~i~~~Dva~~i~~~l~~~~-  267 (296)
                      ..|+.+|++.+.+.+.       .++++++|+||.+.++.....  ....  ........+.+++|+|++++.++..+. 
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~  230 (247)
T 1uzm_A          151 ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDAS  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            6799999999877652       589999999999987642110  0000  000011347899999999999887532 


Q ss_pred             -CCCCeEEEEe
Q 022495          268 -SSYKVVEIIS  277 (296)
Q Consensus       268 -~~~~~~~i~~  277 (296)
                       ..++++++.+
T Consensus       231 ~~~G~~i~vdg  241 (247)
T 1uzm_A          231 YISGAVIPVDG  241 (247)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCcCCEEEECC
Confidence             3566777655

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.91  E-value=8e-24  Score=181.69  Aligned_cols=201  Identities=10%  Similarity=0.073  Sum_probs=140.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++..+.......++.++.+|++| .+++.++++.      ++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRS-LQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcCCC
Confidence            4578999999999999999999999999999999999877665443334689999999999 7776665542      49


Q ss_pred             CEEEEcCCCCCCCCCc-----c----hhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          137 EAVVCATGFQPGWDLF-----A----PWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~-----~----~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                      |+||||||+.......     .    .+.    .         +.+++.+++.+ ++||++||...+...          
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------  149 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPN----------  149 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSS----------
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCC----------
Confidence            9999999975321110     0    111    1         66666666655 699999998765322          


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCcee------ecc--------cCccccCCcCHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNII------MET--------EDTLYEGTISRDQ  254 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~------~~~--------~~~~~~~~i~~~D  254 (296)
                        .....|+.+|++.+.+.+.      ..++++.|+||.+.++.......      ...        .......+.+++|
T Consensus       150 --~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  227 (281)
T 3zv4_A          150 --GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEE  227 (281)
T ss_dssp             --SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGG
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHH
Confidence              2245699999999987652      24999999999999875322100      000        0011134678999


Q ss_pred             HHHHHHHHhcCCC---CCCCeEEEEe
Q 022495          255 VAEVAVEALLHPE---SSYKVVEIIS  277 (296)
Q Consensus       255 va~~i~~~l~~~~---~~~~~~~i~~  277 (296)
                      +|++++.++.++.   ..|+++++.+
T Consensus       228 vA~~v~fL~s~~~~~~itG~~i~vdG  253 (281)
T 3zv4_A          228 YTGAYVFFATRGDSLPATGALLNYDG  253 (281)
T ss_dssp             GSHHHHHHHSTTTSTTCSSCEEEESS
T ss_pred             HHHHHHHhhcccccccccCcEEEECC
Confidence            9999999887444   3566666654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.91  E-value=1.5e-23  Score=182.99  Aligned_cols=202  Identities=15%  Similarity=0.170  Sum_probs=140.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc------------chhhhc---ccCCCCCeEEEEcccCCChHH
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL------------DKAKTT---LSKDNPSLQIVKADVTEGSAK  127 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~------------~~~~~~---~~~~~~~~~~~~~D~~d~~~~  127 (296)
                      ++++|++|||||+|+||+++++.|+++|++|++++|+.            +...+.   +.....++.++.+|++| .++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~  121 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD-LAS  121 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHH
Confidence            56789999999999999999999999999999998862            222211   11234678999999999 887


Q ss_pred             HHHHhcC------CCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcC-CCEEEEEccceeccC
Q 022495          128 LSEAIGD------DSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRG-VNRFILISSILVNGA  183 (296)
Q Consensus       128 ~~~~~~~------~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~  183 (296)
                      +.++++.      ++|+||||||+.....    ..+.+..             +.+++.+++.+ .++||++||...+..
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~  201 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG  201 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence            7776642      4999999999754321    1111111             66677777665 579999999876532


Q ss_pred             ccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce----e--------------
Q 022495          184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI----I--------------  238 (296)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~----~--------------  238 (296)
                      .            .....|+.+|++.+.+.+       ..|+++++|+||++.++......    .              
T Consensus       202 ~------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (317)
T 3oec_A          202 A------------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAE  269 (317)
T ss_dssp             C------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHH
T ss_pred             C------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHH
Confidence            2            235679999999998765       25899999999999986421100    0              


Q ss_pred             -ecccCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          239 -METEDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       239 -~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                       ..........+.+++|+|++++.++....  ..|+++++.+
T Consensus       270 ~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdG  311 (317)
T 3oec_A          270 LFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG  311 (317)
T ss_dssp             HHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECc
Confidence             00111111457899999999888875432  3566777654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=6.4e-24  Score=180.55  Aligned_cols=201  Identities=15%  Similarity=0.164  Sum_probs=140.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+.......++.++.+|++| .+++.++++.      ++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD-PKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence            3568999999999999999999999999999999999877655433223578999999999 7877766543      48


Q ss_pred             CEEEEcCCCCCCCCC----cchhH------H---HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          137 EAVVCATGFQPGWDL----FAPWK------A---INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~------~---~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      |+||||||.......    .+.+.      .   .++++++...  ..++||++||..++ .            ......
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~------------~~~~~~  148 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-G------------AFGLAH  148 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-C------------HHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-C------------CCCcHH
Confidence            999999997543211    11111      1   3444444332  14699999999765 1            123567


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHHHHHHHhcCCC--C
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAEVAVEALLHPE--S  268 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~~i~~~l~~~~--~  268 (296)
                      |+.+|++.+.+.+       ..|+++++|+||.+.++......  ...  ........+.+++|+|++++.++..+.  .
T Consensus       149 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~  228 (263)
T 2a4k_A          149 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYI  228 (263)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999887764       25899999999999987533210  000  000011347899999999999887543  3


Q ss_pred             CCCeEEEEe
Q 022495          269 SYKVVEIIS  277 (296)
Q Consensus       269 ~~~~~~i~~  277 (296)
                      .++.+.+.+
T Consensus       229 tG~~i~vdg  237 (263)
T 2a4k_A          229 TGQALYVDG  237 (263)
T ss_dssp             CSCEEEEST
T ss_pred             cCCEEEECC
Confidence            566776655

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.91  E-value=9e-24  Score=181.73  Aligned_cols=192  Identities=13%  Similarity=0.135  Sum_probs=133.6

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc----------ccCCCCCeEEEEcccCCChHHHHH
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT----------LSKDNPSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~~~~~D~~d~~~~~~~  130 (296)
                      .+++++|+++||||+|+||++++++|+++|++|++++|+.++..++          +.....++.++.+|++| .+++.+
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~   82 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD-GDAVAA   82 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS-HHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHH
Confidence            3567899999999999999999999999999999999997642211          11124578999999999 887777


Q ss_pred             HhcC------CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCc
Q 022495          131 AIGD------DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       131 ~~~~------~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~  187 (296)
                      +++.      ++|++|||||+.......    +.+..             +.+++.+++.+.++||++||...+...   
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---  159 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK---  159 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG---
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC---
Confidence            6652      399999999975432211    11111             444445555567899999998654321   


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCc-ccCCCCCCceeecccCccccCCcCHHHHHHHH
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGG-LRNEPPTGNIIMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~-i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                              ......|+.+|++.+.+.+       ..|+++++|+||+ +.++.....   .........+.+++|+|+++
T Consensus       160 --------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~---~~~~~~~~r~~~pedvA~~~  228 (285)
T 3sc4_A          160 --------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL---LGGDEAMARSRKPEVYADAA  228 (285)
T ss_dssp             --------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHH---HTSCCCCTTCBCTHHHHHHH
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhh---ccccccccCCCCHHHHHHHH
Confidence                    1224679999999998765       3689999999994 544321110   01111123467899999999


Q ss_pred             HHHhcCCC
Q 022495          260 VEALLHPE  267 (296)
Q Consensus       260 ~~~l~~~~  267 (296)
                      +.++..+.
T Consensus       229 ~~l~s~~~  236 (285)
T 3sc4_A          229 YVVLNKPS  236 (285)
T ss_dssp             HHHHTSCT
T ss_pred             HHHhCCcc
Confidence            99987664

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=1e-23  Score=178.47  Aligned_cols=203  Identities=17%  Similarity=0.188  Sum_probs=140.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEE-cCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV-RDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ...++|+||||||+|+||++++++|+++|++|++++ |+.+...+..   .....++.++.+|++| .+++.++++.   
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD-WDSTKQAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCC-HHHHHHHHHHHHH
Confidence            345689999999999999999999999999999988 5444332211   1234678999999999 8877776652   


Q ss_pred             ---CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         ++|+||||||.......    .+.+..             +.+++.+++.+.++||++||...+...          
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  157 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----------  157 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC----------
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC----------
Confidence               39999999997543211    111111             667777888887899999998765322          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce---eec-ccCccccCCcCHHHHHHHHHHHh
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI---IME-TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~---~~~-~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                        .+...|+.+|++.+.+.+       ..++++++|+||.+.++......   ... ........+.+++|+|++++.++
T Consensus       158 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  235 (256)
T 3ezl_A          158 --FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLA  235 (256)
T ss_dssp             --SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             --CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence              235679999999987764       25899999999999886422110   000 00011134678999999999888


Q ss_pred             cCC--CCCCCeEEEEe
Q 022495          264 LHP--ESSYKVVEIIS  277 (296)
Q Consensus       264 ~~~--~~~~~~~~i~~  277 (296)
                      ...  ...|+++++.+
T Consensus       236 s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          236 SEESGFSTGADFSLNG  251 (256)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CCcccCCcCcEEEECC
Confidence            643  24567777755

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.91  E-value=9.1e-24  Score=181.08  Aligned_cols=204  Identities=15%  Similarity=0.112  Sum_probs=144.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.+...+..   .....++.++.+|++| .+++.++++.    
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISD-PKSVEETISQQEKD  108 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCC-HHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999999999876543221   1123578999999999 7877766542    


Q ss_pred             --CCCEEEEcCCCCCC-CCC--cch---hH-------------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 --DSEAVVCATGFQPG-WDL--FAP---WK-------------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 --~~d~vv~~ag~~~~-~~~--~~~---~~-------------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                        ++|+||||||.... ...  ...   +.             .+++++.+++.+.++||++||..++...         
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  179 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---------  179 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC----------
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC---------
Confidence              49999999996543 111  111   10             1688888888888899999998754321         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce--eecc--cCccccCCcCHHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI--IMET--EDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~--~~~~--~~~~~~~~i~~~Dva~~i~~~  262 (296)
                       +..+...|+.+|++.+.+++.       .+ ++++|+||.+.++......  ....  .......+++++|+|++++.+
T Consensus       180 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  257 (279)
T 3ctm_A          180 -IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYL  257 (279)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHH
T ss_pred             -CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHH
Confidence             022356799999999987752       46 9999999999987542110  0000  000112478999999999998


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +..+.  ..|+++++.+
T Consensus       258 ~s~~~~~~tG~~i~vdg  274 (279)
T 3ctm_A          258 ASNASTFTTGSDVVIDG  274 (279)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCccccCccCCEEEECC
Confidence            87532  4567777765

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.91  E-value=2.3e-23  Score=181.96  Aligned_cols=192  Identities=18%  Similarity=0.185  Sum_probs=131.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc-----CCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ++++|+||||||+||||++++++|+++|++|++++|+.++..+...     ....++.++.+|++| .+++.++++.   
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~   83 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS-REGFKMAADEVEA   83 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC-HHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999876554321     112378999999999 8877776642   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHc------CCCEEEEEccceeccCccCcc
Q 022495          135 ---DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKR------GVNRFILISSILVNGAAMGQI  188 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~------~~~~iV~~SS~~~~~~~~~~~  188 (296)
                         ++|+||||||+.......    ..+..             +.+++.+.+.      +.++||++||...+....   
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~---  160 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG---  160 (319)
T ss_dssp             HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS---
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC---
Confidence               389999999975432211    11110             5566666554      357999999998764321   


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec----------------ccCcc
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME----------------TEDTL  245 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~----------------~~~~~  245 (296)
                               ....|+.+|++++.+.+       ..|+++++|+||.+.++.........                .....
T Consensus       161 ---------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (319)
T 3ioy_A          161 ---------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGV  231 (319)
T ss_dssp             ---------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCG
T ss_pred             ---------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHh
Confidence                     24679999997776553       35899999999999987533211100                00011


Q ss_pred             ccCCcCHHHHHHHHHHHhcCCC
Q 022495          246 YEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       246 ~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ....++++|+|+.++.+++.+.
T Consensus       232 ~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          232 HEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             GGSSBCHHHHHHHHHHHHHTTC
T ss_pred             hhcCCCHHHHHHHHHHHHHcCC
Confidence            1123899999999999998753

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.91  E-value=1.6e-23  Score=170.88  Aligned_cols=174  Identities=20%  Similarity=0.170  Sum_probs=128.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv~~ag  144 (296)
                      |+++||||+|+||++++++|+ +|++|++++|+++              ++.+|++| .+++.+++++  ++|+||||||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------~~~~D~~~-~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------DVTVDITN-IDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------SEECCTTC-HHHHHHHHHHHCCEEEEEECCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------ceeeecCC-HHHHHHHHHHhCCCCEEEECCC
Confidence            489999999999999999999 9999999999763              46899999 8888877754  4899999999


Q ss_pred             CCCCCCCc----chhHH---------HHHHHHHHHc---CCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHH
Q 022495          145 FQPGWDLF----APWKA---------INLVEACRKR---GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQ  208 (296)
Q Consensus       145 ~~~~~~~~----~~~~~---------~~~l~~~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~  208 (296)
                      ........    ..+..         .++++++.+.   + ++||++||..++...            .+...|+.+|.+
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~------------~~~~~Y~~sK~~  134 (202)
T 3d7l_A           68 SATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPI------------VQGASAAMANGA  134 (202)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCC------------TTCHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCC------------CccHHHHHHHHH
Confidence            65422211    11110         5677776655   4 699999998655321            234679999999


Q ss_pred             HHHHHHH------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEE
Q 022495          209 AEQYIRK------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEI  275 (296)
Q Consensus       209 ~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i  275 (296)
                      .|.+++.      .++++++||||+++++....     ........+++++|+|++++.++.. ...++++++
T Consensus       135 ~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~-----~~~~~~~~~~~~~dva~~~~~~~~~-~~~G~~~~v  201 (202)
T 3d7l_A          135 VTAFAKSAAIEMPRGIRINTVSPNVLEESWDKL-----EPFFEGFLPVPAAKVARAFEKSVFG-AQTGESYQV  201 (202)
T ss_dssp             HHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHH-----GGGSTTCCCBCHHHHHHHHHHHHHS-CCCSCEEEE
T ss_pred             HHHHHHHHHHHccCCeEEEEEecCccCCchhhh-----hhhccccCCCCHHHHHHHHHHhhhc-cccCceEec
Confidence            9988864      38999999999999864210     0111124589999999999988843 345667765

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.91  E-value=6e-24  Score=178.57  Aligned_cols=198  Identities=17%  Similarity=0.174  Sum_probs=139.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhcc---cCCCCCeEE-EEcccCCChHHHHHHhc-------
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTL---SKDNPSLQI-VKADVTEGSAKLSEAIG-------  133 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~---~~~~~~~~~-~~~D~~d~~~~~~~~~~-------  133 (296)
                      +|+|+||||+|+||++++++|+++|++|+++ +|++++..+..   .....++.+ +.+|++| .+.+.++++       
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE-AEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC-HHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999998 78876554321   112345666 8999999 787777653       


Q ss_pred             CCCCEEEEcCCCCCCCC----CcchhH-------------HHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          134 DDSEAVVCATGFQPGWD----LFAPWK-------------AINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~----~~~~~~-------------~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      + +|+||||||......    ....+.             .+.+++.+++.+.++||++||...+...            
T Consensus        80 ~-~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  146 (245)
T 2ph3_A           80 G-LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN------------  146 (245)
T ss_dssp             C-CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------
T ss_pred             C-CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC------------
Confidence            5 999999999754211    111111             1677788888888899999998654321            


Q ss_pred             hhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          197 NVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      .+...|+.+|.+.+.+.+.       .++++++|+||.++++......  ...  ........+++++|+|++++.++..
T Consensus       147 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  226 (245)
T 2ph3_A          147 PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSE  226 (245)
T ss_dssp             SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            1246799999999877642       4899999999999886422110  000  0001113478999999999998876


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      +.  ..++.+++.+
T Consensus       227 ~~~~~~G~~~~v~g  240 (245)
T 2ph3_A          227 KAGYITGQTLCVDG  240 (245)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             ccccccCCEEEECC
Confidence            43  3477787765

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.91  E-value=8.5e-24  Score=185.01  Aligned_cols=219  Identities=15%  Similarity=0.070  Sum_probs=145.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC----------cchhhhc---ccCCCCCeEEEEcccCCChHHHH
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD----------LDKAKTT---LSKDNPSLQIVKADVTEGSAKLS  129 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~  129 (296)
                      .+++|++|||||+|+||+++|+.|+++|++|++++|+          .+...+.   +.....++.++.+|++| .+++.
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~  102 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVAD-WDQAA  102 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTS-HHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHH
Confidence            4678999999999999999999999999999999987          3333221   11234578899999999 88777


Q ss_pred             HHhcC------CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC------CCEEEEEcccee
Q 022495          130 EAIGD------DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG------VNRFILISSILV  180 (296)
Q Consensus       130 ~~~~~------~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~------~~~iV~~SS~~~  180 (296)
                      ++++.      ++|+||||||+.......    +.+..             +.+++.+++.+      -++||++||...
T Consensus       103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            76652      399999999976432211    11111             33344444321      159999999875


Q ss_pred             ccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-ccCccccCCcCH
Q 022495          181 NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-TEDTLYEGTISR  252 (296)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-~~~~~~~~~i~~  252 (296)
                      +..            ......|+.+|++++.+.+       ..|+++++|+|| +.++......... ........++++
T Consensus       183 ~~~------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~p  249 (322)
T 3qlj_A          183 LQG------------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAP  249 (322)
T ss_dssp             HHC------------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTTCG
T ss_pred             ccC------------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCCCH
Confidence            432            1235679999999998765       268999999999 7776533221100 001111245789


Q ss_pred             HHHHHHHHHHhcCCC--CCCCeEEEEeCCC--------------CCCCCHHHHHHHhhc
Q 022495          253 DQVAEVAVEALLHPE--SSYKVVEIISRVD--------------APKRSYEDLFGSIKQ  295 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~--~~~~~~~i~~~~~--------------~~~~~~~el~~~i~~  295 (296)
                      +|+|++++.++....  ..|+++++.+...              ....++.|+++.+.+
T Consensus       250 edva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~  308 (322)
T 3qlj_A          250 ENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVAD  308 (322)
T ss_dssp             GGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHH
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHH
Confidence            999999888886543  3577777765110              123477888887754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.91  E-value=8.4e-23  Score=174.70  Aligned_cols=196  Identities=11%  Similarity=0.093  Sum_probs=137.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc----------ccCCCCCeEEEEcccCCChHHHHHH
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT----------LSKDNPSLQIVKADVTEGSAKLSEA  131 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~~~~~D~~d~~~~~~~~  131 (296)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.++..+.          +.....++.++.+|++| .+++.++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~   80 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE-EDQVRAA   80 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC-HHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHH
Confidence            467799999999999999999999999999999999997643221          11124578999999999 7877766


Q ss_pred             hcC------CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCcc
Q 022495          132 IGD------DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQI  188 (296)
Q Consensus       132 ~~~------~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~  188 (296)
                      ++.      ++|+||||||........    +.+..             +.+++.+++.+.++||++||...+...    
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----  156 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA----  156 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH----
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC----
Confidence            542      499999999975432211    11111             667777777777899999998654321    


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCc-ccCCCCCCceeecccCccccCCcCHHHHHHHHH
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGG-LRNEPPTGNIIMETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~-i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                            .......|+.+|++.+.+.+       ..|+++++|+||+ +.++... ..  .  ......+.+++|+|++++
T Consensus       157 ------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~-~~--~--~~~~~~~~~pedvA~~v~  225 (274)
T 3e03_A          157 ------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN-ML--P--GVDAAACRRPEIMADAAH  225 (274)
T ss_dssp             ------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------CCCGGGSBCTHHHHHHHH
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh-hc--c--cccccccCCHHHHHHHHH
Confidence                  12346779999999998765       3589999999994 6665431 11  1  111223678999999999


Q ss_pred             HHhcCCC--CCCCeE
Q 022495          261 EALLHPE--SSYKVV  273 (296)
Q Consensus       261 ~~l~~~~--~~~~~~  273 (296)
                      .++....  ..|+.+
T Consensus       226 ~l~s~~~~~itG~~i  240 (274)
T 3e03_A          226 AVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHTSCCTTCCSCEE
T ss_pred             HHhCccccccCCeEE
Confidence            9887543  244444

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.91  E-value=7.5e-24  Score=182.28  Aligned_cols=192  Identities=18%  Similarity=0.221  Sum_probs=138.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC---eEEEEEcCcchhhhcccC-----CCCCeEEEEcccCCChHHHHHHhcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      ++++|++|||||+|+||+++++.|+++|+   +|++.+|+.+...+....     ...++.++.+|++| .+++.++++.
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~  108 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ-AEKIKPFIEN  108 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC-GGGHHHHHHT
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHH
Confidence            46789999999999999999999999997   999999998765543211     24578999999999 8888877753


Q ss_pred             ------CCCEEEEcCCCCCCCC-----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCC
Q 022495          135 ------DSEAVVCATGFQPGWD-----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 ------~~d~vv~~ag~~~~~~-----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                            ++|+||||||......     ..+.+..             +.+++.+++.+.++||++||...+...      
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~------  182 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY------  182 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC------
Confidence                  4999999999753211     1111111             666777777777899999998765322      


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee--cccCc--cccCCcCHHHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--ETEDT--LYEGTISRDQVAEVA  259 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~--~~~~~--~~~~~i~~~Dva~~i  259 (296)
                            .....|+.+|++.+.+.+       ..|+++++|+||.+.++........  .....  ....+++++|+|+++
T Consensus       183 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v  256 (287)
T 3rku_A          183 ------PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLI  256 (287)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHH
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHH
Confidence                  225679999999998765       2589999999999988642100000  00000  011246899999999


Q ss_pred             HHHhcCCC
Q 022495          260 VEALLHPE  267 (296)
Q Consensus       260 ~~~l~~~~  267 (296)
                      +.++..+.
T Consensus       257 ~~l~s~~~  264 (287)
T 3rku_A          257 VYATSRKQ  264 (287)
T ss_dssp             HHHHTSCT
T ss_pred             HHHhCCCC
Confidence            99887654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.91  E-value=7e-24  Score=178.12  Aligned_cols=199  Identities=18%  Similarity=0.140  Sum_probs=137.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      +|+|+||||+|+||++++++|+++|++|+++ .|+++...+..   .....++.++.+|++| .+++.++++.      +
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999985 78765544321   1123568899999999 8888777652      3


Q ss_pred             CCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      +|+||||||.......    ...+..             +.+++.+++.+.++||++||...+...            .+
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~  147 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN------------IG  147 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------TT
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC------------CC
Confidence            9999999997543211    111110             555566666677899999998654221            12


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--eec--ccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--IME--TEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--~~~--~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ...|+.+|.+.+.+.+       ..++++++|+||.++++......  ...  ........+++++|+|++++.++.++.
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (244)
T 1edo_A          148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPA  227 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSG
T ss_pred             CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            4679999999987664       25899999999999986422110  000  000111347899999999999885443


Q ss_pred             ---CCCCeEEEEe
Q 022495          268 ---SSYKVVEIIS  277 (296)
Q Consensus       268 ---~~~~~~~i~~  277 (296)
                         ..++.+++.+
T Consensus       228 ~~~~~G~~~~v~g  240 (244)
T 1edo_A          228 ASYITGQAFTIDG  240 (244)
T ss_dssp             GGGCCSCEEEEST
T ss_pred             cCCcCCCEEEeCC
Confidence               3467777765

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.91  E-value=8.6e-23  Score=171.13  Aligned_cols=195  Identities=20%  Similarity=0.243  Sum_probs=135.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH------HHHHHhcCCCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA------KLSEAIGDDSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~------~~~~~~~~~~d~v  139 (296)
                      +|+++||||+|+||++++++|+++|++|++++|++++..+.+     ++.++.+|++| .+      .+.+.+++ +|+|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~-id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL-----GAVPLPTDLEK-DDPKGLVKRALEALGG-LHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----TCEEEECCTTT-SCHHHHHHHHHHHHTS-CCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhh-----CcEEEecCCch-HHHHHHHHHHHHHcCC-CCEE
Confidence            589999999999999999999999999999999987643322     27889999997 32      12223456 9999


Q ss_pred             EEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          140 VCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       140 v~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |||||.......    .+.+..             +.+++.|++.+.++||++||...+....          ..+...|
T Consensus        75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~~Y  144 (239)
T 2ekp_A           75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG----------PVPIPAY  144 (239)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TSCCHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC----------CCCCccH
Confidence            999997542211    111111             6677777777788999999998765321          1235679


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce----eec--ccCccccCCcCHHHHHHHHHHHhcCCC--
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI----IME--TEDTLYEGTISRDQVAEVAVEALLHPE--  267 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~----~~~--~~~~~~~~~i~~~Dva~~i~~~l~~~~--  267 (296)
                      +.+|++.+.+.+       ..|+++++|+||++.++......    ...  ........+.+++|+|++++.++..+.  
T Consensus       145 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~  224 (239)
T 2ekp_A          145 TTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEY  224 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            999999998764       24899999999999987532100    000  000111246899999999998886532  


Q ss_pred             CCCCeEEEEe
Q 022495          268 SSYKVVEIIS  277 (296)
Q Consensus       268 ~~~~~~~i~~  277 (296)
                      ..++.+.+.+
T Consensus       225 ~tG~~~~vdg  234 (239)
T 2ekp_A          225 LTGQAVAVDG  234 (239)
T ss_dssp             CCSCEEEEST
T ss_pred             CCCCEEEECC
Confidence            3566666654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.91  E-value=1.2e-23  Score=178.73  Aligned_cols=201  Identities=12%  Similarity=0.034  Sum_probs=138.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++|++++..+..   .....++.++.+|++| .+++.++++.     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999999976654322   1234578999999999 7777665541     


Q ss_pred             -CCCEEEEcCCCC-CCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQ-PGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~-~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|+||||||.. .....    .+.+..             +.+++.+++.+.++||++||...+...           
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  151 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------  151 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------
Confidence             399999999975 21111    111111             566666766677899999998765322           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc------------ee-ecc-------cCccccC
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN------------II-MET-------EDTLYEG  248 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~------------~~-~~~-------~~~~~~~  248 (296)
                       .....|+.+|++.+.+.+       ..++++++|+||++.++.....            .. ...       .......
T Consensus       152 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  230 (262)
T 1zem_A          152 -PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRR  230 (262)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSS
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCC
Confidence             124679999999987664       3589999999999988642110            00 000       0001123


Q ss_pred             CcCHHHHHHHHHHHhcCCC--CCCCeEEEE
Q 022495          249 TISRDQVAEVAVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       249 ~i~~~Dva~~i~~~l~~~~--~~~~~~~i~  276 (296)
                      +.+++|+|++++.++....  ..|+++.+.
T Consensus       231 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vd  260 (262)
T 1zem_A          231 YGDINEIPGVVAFLLGDDSSFMTGVNLPIA  260 (262)
T ss_dssp             CBCGGGSHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCcEEecC
Confidence            6789999999998886532  245555543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=3.7e-23  Score=175.00  Aligned_cols=198  Identities=17%  Similarity=0.157  Sum_probs=137.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      +|+++||||+|+||++++++|+++|  +.|++.+|+.+...+.......++.++.+|++| .+++.++++.      ++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE-DSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHhcCCcc
Confidence            6899999999999999999999985  789889999877654432223578999999999 8877776642      499


Q ss_pred             EEEEcCCCCCC-CC--C--cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          138 AVVCATGFQPG-WD--L--FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       138 ~vv~~ag~~~~-~~--~--~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      +||||||.... ..  .  .+.+..             +.+++.+++.+ ++||++||...+...            .+.
T Consensus        81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~------------~~~  147 (254)
T 3kzv_A           81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYF------------SSW  147 (254)
T ss_dssp             EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSS------------CCS
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCC------------CCc
Confidence            99999997432 11  1  111111             66666667766 799999998765432            235


Q ss_pred             HHHHHHHHHHHHHHHH-----hCCcEEEEecCcccCCCCCCceeecc----cC---------ccccCCcCHHHHHHHHHH
Q 022495          200 GLTLIAKLQAEQYIRK-----SGINYTIIRPGGLRNEPPTGNIIMET----ED---------TLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~----~~---------~~~~~~i~~~Dva~~i~~  261 (296)
                      ..|+.+|++.+.+.+.     .+++++.|+||.+.++..........    ..         .....+.+++|+|++++.
T Consensus       148 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~  227 (254)
T 3kzv_A          148 GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAK  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHH
Confidence            6799999999987752     48999999999999876433211000    00         011236789999999999


Q ss_pred             HhcCCC---CCCCeEEEEe
Q 022495          262 ALLHPE---SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~---~~~~~~~i~~  277 (296)
                      ++....   ..|+.+++.+
T Consensus       228 L~s~~~~~~itG~~i~vdg  246 (254)
T 3kzv_A          228 LALHGIPDGVNGQYLSYND  246 (254)
T ss_dssp             HHHHCCCGGGTTCEEETTC
T ss_pred             HHhhcccCCCCccEEEecC
Confidence            887653   4566665543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.91  E-value=1.5e-22  Score=172.79  Aligned_cols=204  Identities=17%  Similarity=0.179  Sum_probs=138.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-hhhh---cccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++++.. ...+   .+.....++.++.+|++| .+++.++++.   
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~  105 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD-AEAIEQAIRETVE  105 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999877653 2222   122235678999999999 8877776652   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc----chhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 ---DSEAVVCATGFQPGWDLF----APWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~----~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                         ++|+||||||+.......    +.+..         .++++++...  +.++||++||......           +.
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~-----------~~  174 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV-----------PW  174 (271)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC-----------CS
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC-----------CC
Confidence               399999999975432211    11111         4445554433  2469999999753211           11


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec---ccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME---TEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~---~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      .+...|+.+|++.+.+.+       ..|+++++|+||.+.++.........   ........+.+++|+|++++.++...
T Consensus       175 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~  254 (271)
T 3v2g_A          175 PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQ  254 (271)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            235679999999998764       25899999999999987643211000   00111134678999999998888543


Q ss_pred             C--CCCCeEEEEe
Q 022495          267 E--SSYKVVEIIS  277 (296)
Q Consensus       267 ~--~~~~~~~i~~  277 (296)
                      .  ..|+++++.+
T Consensus       255 ~~~itG~~i~vdG  267 (271)
T 3v2g_A          255 GKFVTGASLTIDG  267 (271)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             cCCccCCEEEeCc
Confidence            2  4566776654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.90  E-value=8.8e-23  Score=178.89  Aligned_cols=200  Identities=18%  Similarity=0.101  Sum_probs=140.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEE-cCcchhhhccc----CCCCCeEEEEcccCCChH------------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV-RDLDKAKTTLS----KDNPSLQIVKADVTEGSA------------  126 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~------------  126 (296)
                      +++|++|||||+|+||+++++.|+++|++|++++ |+++...+...    ....++.++.+|++| .+            
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN-VATAPVSGADGSAP  122 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-SCBCC-------CC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCC-chhccccccccccc
Confidence            6789999999999999999999999999999999 98765543221    123578999999999 67            


Q ss_pred             -----HHHHHhcC------CCCEEEEcCCCCCCCCC------------------cchhHH-------------HHHHHHH
Q 022495          127 -----KLSEAIGD------DSEAVVCATGFQPGWDL------------------FAPWKA-------------INLVEAC  164 (296)
Q Consensus       127 -----~~~~~~~~------~~d~vv~~ag~~~~~~~------------------~~~~~~-------------~~~l~~~  164 (296)
                           ++.++++.      ++|+||||||+......                  ...+..             +.+++.+
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 77766541      39999999997532211                  111110             5666667


Q ss_pred             HHcC------CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCC
Q 022495          165 RKRG------VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNE  231 (296)
Q Consensus       165 ~~~~------~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~  231 (296)
                      ++.+      .++||++||...+...            .+...|+.+|++++.+.+       ..++++++|+||++.++
T Consensus       203 ~~~~~~~~~~~g~IV~isS~~~~~~~------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~  270 (328)
T 2qhx_A          203 AGTPAKHRGTNYSIINMVDAMTNQPL------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV  270 (328)
T ss_dssp             HHSCGGGSCSCEEEEEECCTTTTSCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             HhcCCcCCCCCcEEEEECchhhccCC------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCC
Confidence            6766      6899999998765321            235679999999998765       25899999999999998


Q ss_pred             CCCCcee-ec-ccCcc-cc-CCcCHHHHHHHHHHHhcCC--CCCCCeEEEEe
Q 022495          232 PPTGNII-ME-TEDTL-YE-GTISRDQVAEVAVEALLHP--ESSYKVVEIIS  277 (296)
Q Consensus       232 ~~~~~~~-~~-~~~~~-~~-~~i~~~Dva~~i~~~l~~~--~~~~~~~~i~~  277 (296)
                      . ..... .. ..... .. .+.+++|+|++++.++...  ...|+++++.+
T Consensus       271 ~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  321 (328)
T 2qhx_A          271 D-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  321 (328)
T ss_dssp             C-CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             c-cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            6 22100 00 00011 12 4688999999999988643  23566666654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.90  E-value=8e-23  Score=175.64  Aligned_cols=204  Identities=17%  Similarity=0.179  Sum_probs=139.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-hh---cccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+.+.. .+   .+.....++.++.+|++| .+++.++++.   
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~  103 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV-VEDIVRMFEEAVK  103 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCC-HHHHHHHHHHHHH
Confidence            467789999999999999999999999999999999987542 21   112134578999999999 7777665531   


Q ss_pred             ---CCCEEEEcCCCCCCCCC----cchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 ---DSEAVVCATGFQPGWDL----FAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~----~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                         ++|+||||||.......    .+.+..         .++++++...  +.++||++||...+....           
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  172 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV-----------  172 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC-----------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC-----------
Confidence               39999999997543211    111111         5555665554  557999999987543211           


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-------------eecc--c--CccccCCcCH
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-------------IMET--E--DTLYEGTISR  252 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-------------~~~~--~--~~~~~~~i~~  252 (296)
                      .+...|+.+|++.+.+.+       ..|+++++|+||.+.++......             ....  .  ......+.++
T Consensus       173 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  252 (283)
T 1g0o_A          173 PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLP  252 (283)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCH
Confidence            124679999999998765       25899999999999886321100             0000  0  1111236789


Q ss_pred             HHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          253 DQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +|+|++++.++....  ..|+++++.+
T Consensus       253 ~dvA~~v~~l~s~~~~~itG~~i~vdg  279 (283)
T 1g0o_A          253 IDIARVVCFLASNDGGWVTGKVIGIDG  279 (283)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            999999998887543  3566666654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.90  E-value=2.8e-23  Score=175.66  Aligned_cols=197  Identities=17%  Similarity=0.161  Sum_probs=137.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------C
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------D  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~  135 (296)
                      ++|++|++|||||+++||+++++.|+++|++|++.+|+....       ..+..++++|++| .+.+.++++.      +
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~   78 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-------LPEELFVEADLTT-KEGCAIVAEATRQRLGG   78 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-------SCTTTEEECCTTS-HHHHHHHHHHHHHHTSS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-------CCcEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999999976431       1344578999999 7766655432      4


Q ss_pred             CCEEEEcCCCCCCC-CC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          136 SEAVVCATGFQPGW-DL-----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       136 ~d~vv~~ag~~~~~-~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      +|++|||||+.... ..     .+.+..             +.+++.|++.+-++||++||+......           .
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~-----------~  147 (261)
T 4h15_A           79 VDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL-----------P  147 (261)
T ss_dssp             CSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------T
T ss_pred             CCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC-----------C
Confidence            99999999964321 11     111111             888899988888899999998643211           0


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-----------------eecccCcc-ccCCcC
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-----------------IMETEDTL-YEGTIS  251 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-----------------~~~~~~~~-~~~~i~  251 (296)
                      .....|+.+|++++.+.+       .+||+++.|.||++.++......                 ........ ...+..
T Consensus       148 ~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~  227 (261)
T 4h15_A          148 ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAK  227 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcC
Confidence            124668999999997765       36999999999999886321100                 00000111 123678


Q ss_pred             HHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          252 RDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++|+|++++.++.+..  ..|+++.+-+
T Consensus       228 peevA~~v~fLaS~~a~~itG~~i~VDG  255 (261)
T 4h15_A          228 PEEVANLIAFLASDRAASITGAEYTIDG  255 (261)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhCchhcCccCcEEEECC
Confidence            9999999887775322  2445555533

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.90  E-value=2e-23  Score=177.35  Aligned_cols=201  Identities=18%  Similarity=0.204  Sum_probs=137.2

Q ss_pred             cCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcc---hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ++++|+++||||+  |+||+++++.|+++|++|++++|+++   ...++.. ....+.++.+|++| .+++.++++.   
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~-~~~~~~~~~~D~~~-~~~v~~~~~~~~~   82 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAE-ALGGALLFRADVTQ-DEELDALFAGVKE   82 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHH-HTTCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH-hcCCcEEEECCCCC-HHHHHHHHHHHHH
Confidence            4678999999999  99999999999999999999999874   2222211 11347899999999 8877776652   


Q ss_pred             ---CCCEEEEcCCCCCC----CC----CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChh
Q 022495          135 ---DSEAVVCATGFQPG----WD----LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~----~~----~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                         ++|+||||||....    ..    ....+..         .++++++...  +.++||++||...+...        
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------  154 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV--------  154 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC--------
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC--------
Confidence               39999999997542    11    1111111         5566666543  12599999998654321        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i  259 (296)
                          .+...|+.+|++.+.+.+.       .++++++|+||.++++..........      .......+.+++|+|+++
T Consensus       155 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v  230 (261)
T 2wyu_A          155 ----PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLG  230 (261)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                2246799999999987652       48999999999999875322100000      000112367899999999


Q ss_pred             HHHhcCCC--CCCCeEEEEe
Q 022495          260 VEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~  277 (296)
                      +.++....  ..++++++.+
T Consensus       231 ~~l~s~~~~~~tG~~~~vdg  250 (261)
T 2wyu_A          231 LFLLSPLASGITGEVVYVDA  250 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHcChhhcCCCCCEEEECC
Confidence            98886432  3466777765

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.90  E-value=6.3e-23  Score=176.98  Aligned_cols=199  Identities=17%  Similarity=0.107  Sum_probs=139.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEE-cCcchhhhccc----CCCCCeEEEEcccCCChH-----------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV-RDLDKAKTTLS----KDNPSLQIVKADVTEGSA-----------  126 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~-----------  126 (296)
                      ++++|+++||||+|+||+++++.|+++|++|++++ |+++...+...    ....++.++.+|++| .+           
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~   84 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN-VATAPVSGADGSA   84 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-SCBCCCC----CC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCC-ccccccccccccc
Confidence            46789999999999999999999999999999999 98765543221    124578999999999 67           


Q ss_pred             ------HHHHHhcC------CCCEEEEcCCCCCCCCC------------------cchhHH-------------HHHHHH
Q 022495          127 ------KLSEAIGD------DSEAVVCATGFQPGWDL------------------FAPWKA-------------INLVEA  163 (296)
Q Consensus       127 ------~~~~~~~~------~~d~vv~~ag~~~~~~~------------------~~~~~~-------------~~~l~~  163 (296)
                            ++.++++.      ++|+||||||+......                  ...+..             +.+++.
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                  77766541      39999999997532211                  111111             566666


Q ss_pred             HHHcC------CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccC
Q 022495          164 CRKRG------VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRN  230 (296)
Q Consensus       164 ~~~~~------~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g  230 (296)
                      +++.+      .++||++||...+...            .....|+.+|++++.+.+       ..+++++.|+||++.+
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T  232 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQPL------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL  232 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCCC------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccC
Confidence            76666      6799999998765422            235679999999997764       2589999999999988


Q ss_pred             CCCCCceeec----ccCccc-c-CCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          231 EPPTGNIIME----TEDTLY-E-GTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       231 ~~~~~~~~~~----~~~~~~-~-~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +. .  ....    ...... . .+.+++|+|++++.++....  ..|.++.+.+
T Consensus       233 ~~-~--~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  284 (291)
T 1e7w_A          233 VD-D--MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  284 (291)
T ss_dssp             GG-G--SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Cc-c--CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence            76 2  1000    000111 2 46789999999999886432  3455665544

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.90  E-value=1.4e-23  Score=177.64  Aligned_cols=201  Identities=14%  Similarity=0.159  Sum_probs=133.8

Q ss_pred             ccCCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcchhhhc---ccC-CCCCeEEEEcccCCChHHHHHHhcC-
Q 022495           62 VSVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSK-DNPSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~-~~~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      ++|++|+++||||+|  +||+++++.|+++|++|++.+|+++..++.   +.. ...++.++++|++| .+++.++++. 
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~   80 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS-DEEVINGFEQI   80 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC-HHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC-HHHHHHHHHHH
Confidence            568899999999876  999999999999999999999997655432   211 34578999999999 7776655532 


Q ss_pred             -----CCCEEEEcCCCCCCCC--------CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCC
Q 022495          135 -----DSEAVVCATGFQPGWD--------LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 -----~~d~vv~~ag~~~~~~--------~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                           ++|++|||||+.....        ..+.+..         ..+.+.+...  +-++||++||......       
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~-------  153 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA-------  153 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC-------
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC-------
Confidence                 4999999999753211        0111111         2222222221  2369999999864322       


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-----cCcc-ccCCcCHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----EDTL-YEGTISRDQVAE  257 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-----~~~~-~~~~i~~~Dva~  257 (296)
                           ...+..|+.+|++++.+.+       .+||+++.|.||++.++..........     .... ...+..++|+|+
T Consensus       154 -----~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~  228 (256)
T 4fs3_A          154 -----VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGK  228 (256)
T ss_dssp             -----CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred             -----cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                 2235679999999987765       369999999999998865332110000     0001 123678999999


Q ss_pred             HHHHHhcCCC--CCCCeEEE
Q 022495          258 VAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i  275 (296)
                      +++.++.+..  ..|+++.+
T Consensus       229 ~v~fL~Sd~a~~iTG~~i~V  248 (256)
T 4fs3_A          229 TAAYLLSDLSSGVTGENIHV  248 (256)
T ss_dssp             HHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHhCchhcCccCCEEEE
Confidence            9887775432  24445444

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=1.4e-22  Score=175.78  Aligned_cols=201  Identities=15%  Similarity=0.155  Sum_probs=136.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--------CCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--------KDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.++..+...        ....++.++.+|++| .+.+.++++.
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~   93 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKS   93 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC-HHHHHHHHHH
Confidence            4568999999999999999999999999999999999765543211        024579999999999 8877776642


Q ss_pred             ------CCCEEEEcCCCCCCCCC----cchhH----H-----HHHHHHHHH----cCCCEEEEEccceeccCccCccCCh
Q 022495          135 ------DSEAVVCATGFQPGWDL----FAPWK----A-----INLVEACRK----RGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 ------~~d~vv~~ag~~~~~~~----~~~~~----~-----~~~l~~~~~----~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                            ++|+||||||.......    ...+.    .     .++++++..    .+.++||++||.. +...       
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~-------  165 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGF-------  165 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCC-------
Confidence                  39999999996432211    11111    1     444554332    3357999999986 2211       


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee------eccc-C-ccccCCcCHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII------METE-D-TLYEGTISRDQVA  256 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~------~~~~-~-~~~~~~i~~~Dva  256 (296)
                           .....|+.+|.+.+.+.+       ..|+++++|+||+++|+.......      .... . .....+.+++|+|
T Consensus       166 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  240 (303)
T 1yxm_A          166 -----PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS  240 (303)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHH
T ss_pred             -----CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHH
Confidence                 124568899998887664       248999999999999973111110      0000 0 0112368999999


Q ss_pred             HHHHHHhcCCC--CCCCeEEEEe
Q 022495          257 EVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       257 ~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++++.++....  ..|+.+++.+
T Consensus       241 ~~i~~l~~~~~~~~~G~~~~v~g  263 (303)
T 1yxm_A          241 SVVCFLLSPAASFITGQSVDVDG  263 (303)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCcccccCCCcEEEECC
Confidence            99999886533  3567777765

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.90  E-value=8.5e-23  Score=174.47  Aligned_cols=201  Identities=11%  Similarity=0.150  Sum_probs=132.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ++|+|+||||+|+||++++++|+++|++|+++ .|+.+...+.   +.....++.++.+|++| .+++.++++.      
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN-AADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999887 5555444322   11234678999999999 7777766642      


Q ss_pred             CCCEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHc---CCCEEEEEccceeccCccCccCChhh
Q 022495          135 DSEAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKR---GVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                      ++|+||||||.......     .+.+..             +.+++.+++.   +.++||++||...+....        
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  175 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--------  175 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT--------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC--------
Confidence            39999999997543111     111111             3444545442   356999999987643221        


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-----cccCccccCCcCHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-----~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                         ..+..|+.+|++.+.+.+       ..|+++++|+||.+.++........     .........+.+++|+|++++.
T Consensus       176 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~  252 (272)
T 4e3z_A          176 ---TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILY  252 (272)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHH
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHH
Confidence               124569999999998764       2489999999999998753321100     0011112346789999999999


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++....  ..|+++++.+
T Consensus       253 l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          253 LLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhCCccccccCCEEeecC
Confidence            886543  3567777754

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.90  E-value=1.6e-22  Score=171.49  Aligned_cols=203  Identities=18%  Similarity=0.120  Sum_probs=134.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-Ccchhhh---cccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|++|||||+|+||++++++|+++|++|+++++ +.+...+   .+.....++.++.+|++| .+++.++++.   
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   82 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN-AAEVEAAISAAAD   82 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999844 4433322   122235678999999999 8877776652   


Q ss_pred             ---CCCEEEEcCCCCCC-CC--Cc--chhHH---------HHHHHHHHHcC--CCEEEEEccceec-cCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPG-WD--LF--APWKA---------INLVEACRKRG--VNRFILISSILVN-GAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~-~~--~~--~~~~~---------~~~l~~~~~~~--~~~iV~~SS~~~~-~~~~~~~~~~~~~  194 (296)
                         ++|+||||||.... ..  ..  +.+..         .++++++...-  .++||++||...+ ..           
T Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  151 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG-----------  151 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC-----------
T ss_pred             HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC-----------
Confidence               39999999986522 11  11  11111         55555554432  2489999998765 21           


Q ss_pred             hhhhhHHHHHHHHHHHHHHH----H--hCCcEEEEecCcccCCCCCCceee---c--ccCccccCCcCHHHHHHHHHHHh
Q 022495          195 FLNVFGLTLIAKLQAEQYIR----K--SGINYTIIRPGGLRNEPPTGNIIM---E--TEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~----~--~~~~~~~lrp~~i~g~~~~~~~~~---~--~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                       ......|+.+|++.+.+.+    +  ..++++.|+||.+.++........   .  ........+.+++|+|++++.++
T Consensus       152 -~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          152 -GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             -STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence             1235679999999998775    2  249999999999998753321100   0  00111134678999999999888


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      ....  ..|+++++.+
T Consensus       231 s~~~~~itG~~i~vdG  246 (259)
T 3edm_A          231 SDDAAYVTGACYDING  246 (259)
T ss_dssp             SGGGTTCCSCEEEESB
T ss_pred             CccccCccCCEEEECC
Confidence            6543  3567777765

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.90  E-value=1.4e-22  Score=171.16  Aligned_cols=190  Identities=16%  Similarity=0.125  Sum_probs=135.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      +.++|+|+||||+|+||++++++|+++|++|++++|+.++..         ...+.+|++| .+++.++++.      ++
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------~~~~~~d~~d-~~~v~~~~~~~~~~~g~i   88 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------DHSFTIKDSG-EEEIKSVIEKINSKSIKV   88 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------SEEEECSCSS-HHHHHHHHHHHHTTTCCE
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------ccceEEEeCC-HHHHHHHHHHHHHHcCCC
Confidence            345789999999999999999999999999999999986532         2457889999 7777766543      48


Q ss_pred             CEEEEcCCCCCCCCC---c--chhH------H---HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          137 EAVVCATGFQPGWDL---F--APWK------A---INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       137 d~vv~~ag~~~~~~~---~--~~~~------~---~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      |+||||||.......   .  ..+.      .   .++++++...  ..++||++||...+...            ....
T Consensus        89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~  156 (251)
T 3orf_A           89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT------------SGMI  156 (251)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TTBH
T ss_pred             CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC------------CCCc
Confidence            999999997543221   1  1111      1   4455555442  12589999998765321            2356


Q ss_pred             HHHHHHHHHHHHHH----H-----hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC---CCC
Q 022495          201 LTLIAKLQAEQYIR----K-----SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH---PES  268 (296)
Q Consensus       201 ~y~~sK~~~e~~~~----~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~---~~~  268 (296)
                      .|+.+|++.+.+.+    +     .++++++|+||.+.++.....    ........+++++|+|++++.++..   ...
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~  232 (251)
T 3orf_A          157 AYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY----MSDANFDDWTPLSEVAEKLFEWSTNSDSRPT  232 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH----CTTSCGGGSBCHHHHHHHHHHHHHCGGGCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh----cccccccccCCHHHHHHHHHHHhcCccccCC
Confidence            79999999998875    2     579999999999988642111    1111234578999999999999987   445


Q ss_pred             CCCeEEEEeC
Q 022495          269 SYKVVEIISR  278 (296)
Q Consensus       269 ~~~~~~i~~~  278 (296)
                      .|+++++...
T Consensus       233 tG~~i~v~~g  242 (251)
T 3orf_A          233 NGSLVKFETK  242 (251)
T ss_dssp             TTCEEEEEEE
T ss_pred             cceEEEEecC
Confidence            7888888773

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.90  E-value=8.6e-23  Score=175.87  Aligned_cols=202  Identities=14%  Similarity=0.146  Sum_probs=132.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhhccc----CCCCCeEEEEcccCCC---hHHHHHHh-
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTLS----KDNPSLQIVKADVTEG---SAKLSEAI-  132 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~----~~~~~~~~~~~D~~d~---~~~~~~~~-  132 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+. ++..+...    ....++.++.+|++|+   .+.+.+++ 
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            457789999999999999999999999999999999998 55432211    1245789999999982   13344333 


Q ss_pred             ------cCCCCEEEEcCCCCCCCCC-----cc---------hhHH-------------HHHHHHHHHcC------CCEEE
Q 022495          133 ------GDDSEAVVCATGFQPGWDL-----FA---------PWKA-------------INLVEACRKRG------VNRFI  173 (296)
Q Consensus       133 ------~~~~d~vv~~ag~~~~~~~-----~~---------~~~~-------------~~~l~~~~~~~------~~~iV  173 (296)
                            .+ +|+||||||+......     ..         .+..             +.+++.+++.+      .++||
T Consensus        99 ~~~~~~g~-iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           99 SCFRAFGR-CDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHSC-CCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHhcCC-CCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence                  35 9999999997543221     11         1110             44455555544      56999


Q ss_pred             EEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce-eecc-cC-
Q 022495          174 LISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI-IMET-ED-  243 (296)
Q Consensus       174 ~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~-~~~~-~~-  243 (296)
                      ++||...+...            .....|+.+|++++.+.+       ..|+++++|+||.++++. .... .... .. 
T Consensus       178 ~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~  244 (288)
T 2x9g_A          178 NLCDAMVDQPC------------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDKWRRK  244 (288)
T ss_dssp             EECCTTTTSCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHHHHHT
T ss_pred             EEecccccCCC------------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHHHHhh
Confidence            99998765421            235679999999987764       248999999999999986 2100 0000 00 


Q ss_pred             ccccCC-cCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          244 TLYEGT-ISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       244 ~~~~~~-i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      .....+ .+++|+|++++.++....  ..|..+.+.+
T Consensus       245 ~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  281 (288)
T 2x9g_A          245 VPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDG  281 (288)
T ss_dssp             CTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence            011234 799999999999887532  3455665544

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.90  E-value=1.2e-22  Score=173.12  Aligned_cols=202  Identities=21%  Similarity=0.194  Sum_probs=137.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEE-cCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGV-RDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++|+|+||||+|+||++++++|+++|++|+++. |+.+...+..   .....++.++.+|++| .+++.++++.    
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVAN-REQCREVLEHEIAQ  101 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHH
Confidence            56789999999999999999999999999997765 4444333221   1234689999999999 8887776652    


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhHH---------HHHHHH----HH-HcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWKA---------INLVEA----CR-KRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~~---------~~~l~~----~~-~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|+||||||........    +.+..         .+++++    +. +.+.++||++||...+...          
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  171 (267)
T 4iiu_A          102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN----------  171 (267)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC----------
T ss_pred             hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC----------
Confidence              499999999976532211    11111         333333    33 4556799999998754322          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee--c-ccCccccCCcCHHHHHHHHHHHhc
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM--E-TEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~--~-~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                        .+...|+.+|++.+.+.+       ..++++++|+||.+.++........  . ........+.+++|+|++++.++.
T Consensus       172 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s  249 (267)
T 4iiu_A          172 --RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMS  249 (267)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHS
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence              235679999998887664       2489999999999999764322100  0 001111346789999999998887


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      ...  ..|+++++.+
T Consensus       250 ~~~~~itG~~i~vdG  264 (267)
T 4iiu_A          250 DIAGYVTRQVISING  264 (267)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             CcccCccCCEEEeCC
Confidence            532  4567777654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.90  E-value=7.8e-23  Score=175.41  Aligned_cols=200  Identities=14%  Similarity=0.169  Sum_probs=138.4

Q ss_pred             cCCCCeEEEEcCCch--HHHHHHHHHHHCCCeEEEEEcCc--chhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGS--SGKRIVEQLLAKGFAVKAGVRDL--DKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~--iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      .+++|+++||||+|+  ||++++++|+++|++|++++|+.  +...++.. ...++.++.+|++| .+++.++++.    
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCA-EFNPAAVLPCDVIS-DQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHG-GGCCSEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHH-hcCCceEEEeecCC-HHHHHHHHHHHHHH
Confidence            467899999999955  99999999999999999999987  33333322 23468999999999 8877776643    


Q ss_pred             --CCCEEEEcCCCCCCC----C-----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCC
Q 022495          135 --DSEAVVCATGFQPGW----D-----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~----~-----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                        ++|+||||||+....    .     ....+..             +.+++.+++. .++||++||...+..       
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~-------  172 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKA-------  172 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSC-------
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccC-------
Confidence              489999999975431    0     1111110             3344444433 479999999876532       


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAE  257 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~  257 (296)
                           ......|+.+|++.+.+.+       ..++++++|+||.+.++..........      .......+.+++|+|+
T Consensus       173 -----~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~  247 (280)
T 3nrc_A          173 -----MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGN  247 (280)
T ss_dssp             -----CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHH
T ss_pred             -----CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                 2235679999999998764       268999999999999875332110000      0011234688999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEe
Q 022495          258 VAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++.++....  ..|+++++.+
T Consensus       248 ~v~~l~s~~~~~~tG~~i~vdg  269 (280)
T 3nrc_A          248 TVAFLCSDMATGITGEVVHVDA  269 (280)
T ss_dssp             HHHHTTSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCcccCCcCCcEEEECC
Confidence            9998887532  4577777755

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.90  E-value=2.1e-22  Score=171.39  Aligned_cols=183  Identities=14%  Similarity=0.136  Sum_probs=132.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCC---CeEEEEEcCcchhhhcc--cCCCCCeEEEEcccCCChHHHHHHhc---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKAKTTL--SKDNPSLQIVKADVTEGSAKLSEAIG---  133 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~---  133 (296)
                      .++++|+|+||||+|+||++++++|+++|   ++|++++|+.++...+.  .....++.++.+|++| .+++.++++   
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~   95 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIE   95 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCC-hHHHHHHHHHHH
Confidence            35678999999999999999999999999   99999999976543221  1123579999999999 787777665   


Q ss_pred             ------CCCCEEEEcCCCCC-CCCC----cchhHH-------------HHHHHHHHHc------C-----CCEEEEEccc
Q 022495          134 ------DDSEAVVCATGFQP-GWDL----FAPWKA-------------INLVEACRKR------G-----VNRFILISSI  178 (296)
Q Consensus       134 ------~~~d~vv~~ag~~~-~~~~----~~~~~~-------------~~~l~~~~~~------~-----~~~iV~~SS~  178 (296)
                            + +|+||||||... ....    ...+..             +.+++.+++.      +     .++||++||.
T Consensus        96 ~~~g~~~-id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           96 GVTKDQG-LNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHGGGC-CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HhcCCCC-ccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence                  6 999999999754 1111    111110             4455555544      2     4799999999


Q ss_pred             eeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecccCccccCCcC
Q 022495          179 LVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTIS  251 (296)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~  251 (296)
                      ..+.....         ..+...|+.+|++.+.+.+.       .++++++|+||++.++....           ..+++
T Consensus       175 ~~~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~  234 (267)
T 1sny_A          175 LGSIQGNT---------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------SAPLD  234 (267)
T ss_dssp             GGCSTTCC---------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------TCSBC
T ss_pred             cccccCCC---------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------CCCCC
Confidence            77643210         11345699999999987642       58999999999998875321           24689


Q ss_pred             HHHHHHHHHHHhcCC
Q 022495          252 RDQVAEVAVEALLHP  266 (296)
Q Consensus       252 ~~Dva~~i~~~l~~~  266 (296)
                      ++|+|+.++.++...
T Consensus       235 ~~~~a~~~~~~~~~~  249 (267)
T 1sny_A          235 VPTSTGQIVQTISKL  249 (267)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999999754

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=6.9e-23  Score=171.38  Aligned_cols=189  Identities=14%  Similarity=0.079  Sum_probs=132.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--------CCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--------DDS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--------~~~  136 (296)
                      ++|+++||||+|+||++++++|+++|++|++++|++++..       ....++.+|++| .+++.++++        +++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------DSNILVDGNKNW-TEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------SEEEECCTTSCH-HHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------cccEEEeCCCCC-HHHHHHHHHHHHHHhCCCCC
Confidence            5789999999999999999999999999999999876532       245778899999 777776654        239


Q ss_pred             CEEEEcCCCCCCCCC-c----chhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          137 EAVVCATGFQPGWDL-F----APWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       137 d~vv~~ag~~~~~~~-~----~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      |+||||||....... .    ..+..         .++++++...  ..++||++||...+..            ..+..
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~  141 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP------------TPSMI  141 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------CTTBH
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC------------CCCcH
Confidence            999999997542211 1    11111         3444444432  1259999999876532            12356


Q ss_pred             HHHHHHHHHHHHHHH---------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC---C
Q 022495          201 LTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE---S  268 (296)
Q Consensus       201 ~y~~sK~~~e~~~~~---------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~---~  268 (296)
                      .|+.+|++.+.+.+.         .++++++|+||++.++.....  . . ......+++++|+|++++.++.++.   .
T Consensus       142 ~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~--~-~-~~~~~~~~~~~dvA~~i~~~l~s~~~~~~  217 (236)
T 1ooe_A          142 GYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW--M-P-NADHSSWTPLSFISEHLLKWTTETSSRPS  217 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH--S-T-TCCGGGCBCHHHHHHHHHHHHHCGGGCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhc--C-C-CccccccCCHHHHHHHHHHHHcCCCcccc
Confidence            799999999987752         359999999999988642111  0 0 1112346889999999997884433   3


Q ss_pred             CCCeEEEEe
Q 022495          269 SYKVVEIIS  277 (296)
Q Consensus       269 ~~~~~~i~~  277 (296)
                      .|+.+.+.+
T Consensus       218 ~G~~~~v~g  226 (236)
T 1ooe_A          218 SGALLKITT  226 (236)
T ss_dssp             TTCEEEEEE
T ss_pred             cccEEEEec
Confidence            477787766

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.89  E-value=2.2e-23  Score=177.46  Aligned_cols=200  Identities=20%  Similarity=0.251  Sum_probs=136.1

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcc---hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||+  |+||+++++.|+++|++|++++|++.   ...++.. ......++.+|++| .+++.++++.    
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~-~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAA-QLGSDIVLQCDVAE-DASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHH-HTTCCCEEECCTTC-HHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHH-hcCCcEEEEccCCC-HHHHHHHHHHHHHH
Confidence            567899999999  99999999999999999999999872   2222211 11235789999999 8887776652    


Q ss_pred             --CCCEEEEcCCCCCC----CC-----CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChh
Q 022495          135 --DSEAVVCATGFQPG----WD-----LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 --~~d~vv~~ag~~~~----~~-----~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                        ++|+||||||....    ..     ....+..         .++++++...  +.++||++||...+...        
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------  156 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI--------  156 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC--------
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC--------
Confidence              39999999997542    11     1111111         5566666543  12599999998765321        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i  259 (296)
                          .+...|+.+|++.+.+.+.       .++++++|+||.++++..........      .......+.+++|+|+++
T Consensus       157 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v  232 (265)
T 1qsg_A          157 ----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSA  232 (265)
T ss_dssp             ----TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                2245799999999987752       48999999999999975322100000      000112468999999999


Q ss_pred             HHHhcCCC--CCCCeEEEEe
Q 022495          260 VEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~  277 (296)
                      +.++..+.  ..++++++.+
T Consensus       233 ~~l~s~~~~~~tG~~~~vdg  252 (265)
T 1qsg_A          233 AFLCSDLSAGISGEVVHVDG  252 (265)
T ss_dssp             HHHTSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhcCccCCEEEECC
Confidence            98886533  2466777765

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.89  E-value=7.5e-23  Score=174.29  Aligned_cols=202  Identities=18%  Similarity=0.164  Sum_probs=130.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      .+++|++|||||+|+||++++++|+++|++|++.++. .+...+.   +.....++.++.+|++| .+++.++++.    
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD-PAAVRRLFATAEEA  102 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999988554 4333321   22234678999999999 8877776642    


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                        ++|+||||||+.......    +.+..         .++++++...  ..++||++||...+..            ..
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~  170 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL------------HP  170 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC------------CT
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC------------CC
Confidence              499999999975432211    11111         3444444332  1359999999865432            12


Q ss_pred             hhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCCCCCceeec-----ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          198 VFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRNEPPTGNIIME-----TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ....|+.+|++.+.+.+.       .|+++++|+||.+.++.........     ........+.+++|+|++++.++..
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  250 (267)
T 3u5t_A          171 SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGP  250 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHST
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            356799999999987752       4899999999999987532211000     0011113467899999999988865


Q ss_pred             CC--CCCCeEEEEe
Q 022495          266 PE--SSYKVVEIIS  277 (296)
Q Consensus       266 ~~--~~~~~~~i~~  277 (296)
                      ..  ..|+++++.+
T Consensus       251 ~~~~itG~~i~vdG  264 (267)
T 3u5t_A          251 DGAWVNGQVLRANG  264 (267)
T ss_dssp             TTTTCCSEEEEESS
T ss_pred             cccCccCCEEEeCC
Confidence            43  2455555543

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.89  E-value=1.9e-22  Score=172.08  Aligned_cols=204  Identities=16%  Similarity=0.126  Sum_probs=136.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhh---cccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .++++|++|||||+|+||++++++|+++|++|++++++... ..+   .+.....++.++.+|++| .+++.++++.   
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   92 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ-VPEIVKLFDQAVA   92 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHH
Confidence            35678999999999999999999999999999998876432 221   122235679999999999 7877766642   


Q ss_pred             ---CCCEEEEcCCCCCCCCC----cchhHH---------HHHHHHHHHcC--CCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 ---DSEAVVCATGFQPGWDL----FAPWKA---------INLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~----~~~~~~---------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                         ++|+||||||.......    .+.+..         .++++++...-  .++||++||......           +.
T Consensus        93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  161 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF-----------SV  161 (270)
T ss_dssp             HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC-----------CC
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC-----------CC
Confidence               49999999997543221    111111         34444443331  359999999752110           12


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc----------eeec------ccCccccCCcCHH
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN----------IIME------TEDTLYEGTISRD  253 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~----------~~~~------~~~~~~~~~i~~~  253 (296)
                      .+...|+.+|++.+.+.+       ..|++++.|+||.+.++.....          ....      ........+.+++
T Consensus       162 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  241 (270)
T 3is3_A          162 PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ  241 (270)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHH
Confidence            235679999999998765       2589999999999998753210          0000      0001112367799


Q ss_pred             HHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          254 QVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       254 Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |+|++++.++....  ..|+++++.+
T Consensus       242 dvA~~v~~L~s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          242 DVANVVGFLVSKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHcCCccCCccCcEEEeCC
Confidence            99999988886432  3566676654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.89  E-value=3.8e-23  Score=175.64  Aligned_cols=203  Identities=13%  Similarity=0.156  Sum_probs=133.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch---hhh---cccCCCCCeEEEEcccCCChHHHHHHhcC-
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK---AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++|....   ..+   .+.....++.++.+|++| .+++.++++. 
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~   85 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN-EEEVAKLFDFA   85 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS-HHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHH
Confidence            46789999999999999999999999999999999876432   221   122235678999999999 8887776652 


Q ss_pred             -----CCCEEEEcCCCCCCCCCc----chhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhh
Q 022495          135 -----DSEAVVCATGFQPGWDLF----APWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 -----~~d~vv~~ag~~~~~~~~----~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                           ++|+||||||+.......    +.+..         .++++++...  +.++||++||...+..           
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~-----------  154 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY-----------  154 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH-----------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC-----------
Confidence                 499999999975432211    11111         4555555543  3469999999865432           


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc----e-eecccCccccCCcCHHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN----I-IMETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~----~-~~~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                       ......|+.+|++.+.+.+       ..+++++.|+||.+.++.....    . ...........+.+++|+|++++.+
T Consensus       155 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L  233 (262)
T 3ksu_A          155 -TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFL  233 (262)
T ss_dssp             -HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHH
Confidence             1224569999999998775       2489999999999987532111    0 0000111113467899999999988


Q ss_pred             hcCCC-CCCCeEEEEe
Q 022495          263 LLHPE-SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~-~~~~~~~i~~  277 (296)
                      +.... ..|+.+++.+
T Consensus       234 ~s~~~~itG~~i~vdG  249 (262)
T 3ksu_A          234 TTDGWWINGQTIFANG  249 (262)
T ss_dssp             HTTTTTCCSCEEEEST
T ss_pred             cCCCCCccCCEEEECC
Confidence            87521 3466666654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.89  E-value=9.1e-23  Score=171.70  Aligned_cols=187  Identities=13%  Similarity=0.137  Sum_probs=132.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEccc--CCChHHHHHHhcC--
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADV--TEGSAKLSEAIGD--  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~--~d~~~~~~~~~~~--  134 (296)
                      .+++|+++||||+|+||++++++|+++|++|++++|++++..+...    ....++.++.+|+  +| .+.+.++++.  
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~-~~~~~~~~~~~~   89 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENAT-AQQYRELAARVE   89 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCC-HHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCC-HHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999876554321    1235677888887  77 6666655431  


Q ss_pred             ----CCCEEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          135 ----DSEAVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                          ++|+||||||........     +.+..             +.+++.+++.+.++||++||...+...        
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  161 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR--------  161 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC--------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC--------
Confidence                399999999974322111     11111             556666677777899999998754322        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH----H----hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhc
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR----K----SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~----~----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                          .....|+.+|++.+.+.+    +    .+++++.|+||.+.++......    .......+..++|+|++++.++.
T Consensus       162 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~p~dva~~~~~l~s  233 (247)
T 3i1j_A          162 ----ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAY----PDENPLNNPAPEDIMPVYLYLMG  233 (247)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHS----TTSCGGGSCCGGGGTHHHHHHHS
T ss_pred             ----CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcc----cccCccCCCCHHHHHHHHHHHhC
Confidence                235679999999998764    2    4799999999999885321110    11112346789999999988886


Q ss_pred             CC
Q 022495          265 HP  266 (296)
Q Consensus       265 ~~  266 (296)
                      ..
T Consensus       234 ~~  235 (247)
T 3i1j_A          234 PD  235 (247)
T ss_dssp             GG
T ss_pred             ch
Confidence            43

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.89  E-value=2.4e-22  Score=172.78  Aligned_cols=200  Identities=16%  Similarity=0.133  Sum_probs=135.4

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcc---hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||+  |+||+++++.|+++|++|++++|+++   ...++.. ...++.++.+|++| .+++.++++.    
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~-~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   96 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAK-GFGSDLVVKCDVSL-DEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH-HTTCCCEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH-hcCCeEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            568999999999  99999999999999999999999874   1222211 11347889999999 8877776642    


Q ss_pred             --CCCEEEEcCCCCCC----CC----CcchhHH---------HHHHHHHHHc---CCCEEEEEccceeccCccCccCChh
Q 022495          135 --DSEAVVCATGFQPG----WD----LFAPWKA---------INLVEACRKR---GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 --~~d~vv~~ag~~~~----~~----~~~~~~~---------~~~l~~~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                        ++|+||||||....    ..    ....+..         .++++++...   +.++||++||...+...        
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--------  168 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV--------  168 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC--------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC--------
Confidence              39999999997542    11    1111111         4455554433   23799999998654321        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i  259 (296)
                          .....|+.+|++++.+.+       ..|+++++|+||.+.++..........      .......+.+++|+|+++
T Consensus       169 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~  244 (285)
T 2p91_A          169 ----PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTA  244 (285)
T ss_dssp             ----TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                224579999999998764       248999999999999975432100000      000112367899999999


Q ss_pred             HHHhcCCC--CCCCeEEEEe
Q 022495          260 VEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~  277 (296)
                      +.++....  ..|+++++.+
T Consensus       245 ~~l~s~~~~~~tG~~~~vdg  264 (285)
T 2p91_A          245 VFLCSDWARAITGEVVHVDN  264 (285)
T ss_dssp             HHHTSGGGTTCCSCEEEEST
T ss_pred             HHHcCCcccCCCCCEEEECC
Confidence            98886432  2466777755

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.89  E-value=2.5e-22  Score=170.96  Aligned_cols=203  Identities=15%  Similarity=0.150  Sum_probs=138.9

Q ss_pred             ccCCCCeEEEEcCCch--HHHHHHHHHHHCCCeEEEEEcCcchhh---hcccC-CCCCeEEEEcccCCChHHHHHHhcC-
Q 022495           62 VSVKQKKIFVAGATGS--SGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLSK-DNPSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~--iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      +++++|+++||||+|+  ||++++++|+++|++|++++|+.....   +.... ...++.++.+|++| .+++.++++. 
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~   81 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN-DAEIETCFASI   81 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS-SHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC-HHHHHHHHHHH
Confidence            3567899999999977  999999999999999999999864322   22211 22379999999999 7777766642 


Q ss_pred             -----CCCEEEEcCCCCCC----CCC----cchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCC
Q 022495          135 -----DSEAVVCATGFQPG----WDL----FAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 -----~~d~vv~~ag~~~~----~~~----~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                           ++|+||||||....    ...    ...+..         .++++++...  +.++||++||...+..       
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------  154 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-------  154 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-------
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-------
Confidence                 49999999997541    110    111110         4455555443  1359999999876532       


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAE  257 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~  257 (296)
                           ......|+.+|++.+.+.+       ..|+++++|+||.+.++.........      ........+.+++|+|+
T Consensus       155 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~  229 (266)
T 3oig_A          155 -----MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGD  229 (266)
T ss_dssp             -----CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                 1235679999999998764       25899999999999986433211000      00011134689999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEe
Q 022495          258 VAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++.++....  ..|+++++.+
T Consensus       230 ~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          230 TAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHcCCchhcCcCCEEEECC
Confidence            9999887533  4567777755

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.89  E-value=2.3e-23  Score=177.70  Aligned_cols=212  Identities=15%  Similarity=0.168  Sum_probs=141.3

Q ss_pred             ccCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcchhh---hcccCCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           62 VSVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      ..+++|+|+||||+  |+||++++++|+++|++|++++|+.....   +... ...++.++.+|++| .+++.++++.  
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dv~~-~~~v~~~~~~~~   87 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAA-EFGSELVFPCDVAD-DAQIDALFASLK   87 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH-HTTCCCEEECCTTC-HHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHH-HcCCcEEEECCCCC-HHHHHHHHHHHH
Confidence            45678999999999  99999999999999999999999853322   1111 22458899999999 8887776652  


Q ss_pred             ----CCCEEEEcCCCCCC----CCC---cc--hhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCC
Q 022495          135 ----DSEAVVCATGFQPG----WDL---FA--PWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~----~~~---~~--~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                          ++|+||||||+...    ...   ..  .+..         .++++++...  ..++||++||...+...      
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------  161 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI------  161 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC------
Confidence                49999999997542    111   11  1111         4555555443  13589999998765322      


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAE  257 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~  257 (296)
                            .....|+.+|++.+.+.+       ..++++++|+||.+.++..........      .......+.+++|+|+
T Consensus       162 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~  235 (271)
T 3ek2_A          162 ------PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGN  235 (271)
T ss_dssp             ------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred             ------CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHH
Confidence                  235679999999998764       258999999999999875433211000      0111134689999999


Q ss_pred             HHHHHhcCC--CCCCCeEEEEeCCCCCCCCHHHHH
Q 022495          258 VAVEALLHP--ESSYKVVEIISRVDAPKRSYEDLF  290 (296)
Q Consensus       258 ~i~~~l~~~--~~~~~~~~i~~~~~~~~~~~~el~  290 (296)
                      +++.++...  ...|+++++.+   |...++.++.
T Consensus       236 ~i~~l~s~~~~~~tG~~i~vdg---G~~~~~~~~~  267 (271)
T 3ek2_A          236 AGAFLLSDLASGVTAEVMHVDS---GFNAVVGGMA  267 (271)
T ss_dssp             HHHHHHSGGGTTCCSEEEEEST---TGGGBCCCC-
T ss_pred             HHHHHcCcccCCeeeeEEEECC---Ceeeehhhhh
Confidence            999888753  23566666655   6666655543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.89  E-value=7.5e-23  Score=172.02  Aligned_cols=193  Identities=17%  Similarity=0.142  Sum_probs=135.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHH-CCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----CCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLA-KGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----DSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----~~d~v  139 (296)
                      ++|++|||||+|+||++++++|++ .|++|++.+|+++.       ....+.++.+|++| .+++.++++.    ++|+|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-------~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-------SAENLKFIKADLTK-QQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-------CCTTEEEEECCTTC-HHHHHHHHHHTTTCCEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-------ccccceEEecCcCC-HHHHHHHHHHHHhCCCCEE
Confidence            478999999999999999999999 78999998887652       12567999999999 8888877751    39999


Q ss_pred             EEcCCCCCCCCC----cchhHH---------HHHHHHHHHcC--CCEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          140 VCATGFQPGWDL----FAPWKA---------INLVEACRKRG--VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       140 v~~ag~~~~~~~----~~~~~~---------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      |||||.......    .+.+..         .++++++...-  .++||++||...+...            .....|+.
T Consensus        75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~~~~~Y~a  142 (244)
T 4e4y_A           75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK------------PNSFAYTL  142 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC------------TTBHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC------------CCCchhHH
Confidence            999997543211    111111         45555544331  1589999999765432            22467999


Q ss_pred             HHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--------------e-cccCccccCCcCHHHHHHHHHHH
Q 022495          205 AKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--------------M-ETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       205 sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--------------~-~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      +|++.+.+.+       ..|+++++|+||.+.++.......              . .........+.+++|+|++++.+
T Consensus       143 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  222 (244)
T 4e4y_A          143 SKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence            9999998765       358999999999998864221100              0 00011113478999999999998


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +..+.  ..|+++++.+
T Consensus       223 ~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          223 LSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hcCccccccCCeEeECC
Confidence            87543  3466777654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.89  E-value=5.8e-22  Score=168.15  Aligned_cols=190  Identities=16%  Similarity=0.183  Sum_probs=130.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---CCCCCeEEEEcccCCChHHHHHHhc-------
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---KDNPSLQIVKADVTEGSAKLSEAIG-------  133 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~-------  133 (296)
                      +++|+++||||+|+||+++++.|+++|++|++++|++++..+...   ....++.++.+|++| .+++.++++       
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ-ESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence            568999999999999999999999999999999999776543321   113568899999999 777665442       


Q ss_pred             CCCCEEEEcCC--CC-------CC-CC-CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccC
Q 022495          134 DDSEAVVCATG--FQ-------PG-WD-LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       134 ~~~d~vv~~ag--~~-------~~-~~-~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~  189 (296)
                      +++|+||||||  ..       .. .+ ..+.+..             +.+++.+++.+.++||++||...+...     
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  156 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-----  156 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-----
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-----
Confidence            13899999995  21       11 11 1111111             566677777777899999998765311     


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cC---ccccCCcCHH
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------ED---TLYEGTISRD  253 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~---~~~~~~i~~~  253 (296)
                              +...|+.+|++.+.+.+       ..|+++++|+||++.++..........      ..   .......+++
T Consensus       157 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  228 (260)
T 2qq5_A          157 --------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTE  228 (260)
T ss_dssp             --------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHH
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHH
Confidence                    13569999999998764       358999999999999876432110000      00   0011135689


Q ss_pred             HHHHHHHHHhcCCC
Q 022495          254 QVAEVAVEALLHPE  267 (296)
Q Consensus       254 Dva~~i~~~l~~~~  267 (296)
                      |+|++++.++..+.
T Consensus       229 ~va~~v~~l~s~~~  242 (260)
T 2qq5_A          229 LSGKCVVALATDPN  242 (260)
T ss_dssp             HHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHhcCcc
Confidence            99999998887653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.89  E-value=3e-22  Score=176.44  Aligned_cols=197  Identities=14%  Similarity=0.133  Sum_probs=138.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh----------cccCCCCCeEEEEcccCCChHHHHHH
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT----------TLSKDNPSLQIVKADVTEGSAKLSEA  131 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~~~~~D~~d~~~~~~~~  131 (296)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.++.++          .+.....++.++.+|++| .+++.++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~  119 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD-EQQISAA  119 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHH
Confidence            56789999999999999999999999999999999999765321          111134678999999999 8877776


Q ss_pred             hcC------CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCcc
Q 022495          132 IGD------DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQI  188 (296)
Q Consensus       132 ~~~------~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~  188 (296)
                      ++.      ++|+||||||+.......    +.+..             +.+++.+++.+.++||++||...+...    
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~----  195 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV----  195 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC----
Confidence            651      399999999975432111    11111             666666677777899999998765421    


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHHHHH----H--hCCcEEEEecCc-ccCCCCCCceeecccCccccCCcCHHHHHHHHHH
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQYIR----K--SGINYTIIRPGG-LRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~~~~----~--~~~~~~~lrp~~-i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                            .......|+.+|++++.+.+    +  .+++++.|.||. +.++... .   .........+.+++|+|++++.
T Consensus       196 ------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~-~---~~~~~~~~r~~~pedvA~~v~~  265 (346)
T 3kvo_A          196 ------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMD-M---LGGPGIESQCRKVDIIADAAYS  265 (346)
T ss_dssp             ------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHH-H---HCC--CGGGCBCTHHHHHHHHH
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHH-h---hccccccccCCCHHHHHHHHHH
Confidence                  12235679999999987764    2  489999999996 5443210 0   0111112346789999999999


Q ss_pred             HhcCCC-CCCCeE
Q 022495          262 ALLHPE-SSYKVV  273 (296)
Q Consensus       262 ~l~~~~-~~~~~~  273 (296)
                      ++.... ..|+++
T Consensus       266 L~s~~~~itG~~i  278 (346)
T 3kvo_A          266 IFQKPKSFTGNFV  278 (346)
T ss_dssp             HHTSCTTCCSCEE
T ss_pred             HHhcCCCCCceEE
Confidence            997632 244444

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.89  E-value=2.3e-22  Score=172.95  Aligned_cols=186  Identities=11%  Similarity=0.146  Sum_probs=131.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC----CCCCeEEEEcccCCChHHHHHHhc-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIG-----  133 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~-----  133 (296)
                      .+++|+|+||||+|+||+++++.|+++|++|++++|++++..+....    ...++.++.+|++| .+++.++++     
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED-MTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC-HHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999998765543210    12368999999999 777776654     


Q ss_pred             --CCCCEEEEc-CCCCCCCCC---cchhH----H---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          134 --DDSEAVVCA-TGFQPGWDL---FAPWK----A---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       134 --~~~d~vv~~-ag~~~~~~~---~~~~~----~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        + +|+|||| ||.......   ...+.    .         +.+++.+++.+ ++||++||...+...          
T Consensus       104 ~g~-iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~----------  171 (286)
T 1xu9_A          104 MGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAY----------  171 (286)
T ss_dssp             HTS-CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSCC----------
T ss_pred             cCC-CCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-CEEEEECCcccccCC----------
Confidence              5 9999999 565432111   11111    0         44555554443 799999998765322          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH----H-----hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          195 FLNVFGLTLIAKLQAEQYIR----K-----SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~----~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                        .+...|+.+|++.+.+.+    +     .++++++++||++.++......    ........++++|+|+.++.++..
T Consensus       172 --~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          172 --PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV----SGIVHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS----CGGGGGGCBCHHHHHHHHHHHHHT
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhc----cccccCCCCCHHHHHHHHHHHHhc
Confidence              235679999999987653    2     3899999999999886421111    111123578999999999999976


Q ss_pred             CC
Q 022495          266 PE  267 (296)
Q Consensus       266 ~~  267 (296)
                      +.
T Consensus       246 ~~  247 (286)
T 1xu9_A          246 RQ  247 (286)
T ss_dssp             TC
T ss_pred             CC
Confidence            53

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.89  E-value=1.9e-22  Score=169.22  Aligned_cols=190  Identities=14%  Similarity=0.120  Sum_probs=133.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc--------CC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG--------DD  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--------~~  135 (296)
                      .++|+++||||+|+||++++++|+++|++|++++|++++..       ....++.+|++| .+++.++++        ++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------SASVIVKMTDSF-TEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------SEEEECCCCSCH-HHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------CCcEEEEcCCCC-HHHHHHHHHHHHHHhCCCC
Confidence            35789999999999999999999999999999999876532       245778899999 777776654        23


Q ss_pred             CCEEEEcCCCCCCCCC-c----chhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          136 SEAVVCATGFQPGWDL-F----APWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~-~----~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      +|+||||||....... .    +.+..         .++++++...  +.++||++||...+...            .+.
T Consensus        77 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~  144 (241)
T 1dhr_A           77 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------------PGM  144 (241)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TTB
T ss_pred             CCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC------------CCc
Confidence            9999999997542211 1    11111         3444444332  12599999998765422            235


Q ss_pred             HHHHHHHHHHHHHHH---------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC--C
Q 022495          200 GLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE--S  268 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~---------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--~  268 (296)
                      ..|+.+|++.+.+.+         ..++++++|+||.+.++.....  . . ......+++++|+|++++.++....  .
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~--~-~-~~~~~~~~~~~~vA~~v~~l~~~~~~~~  220 (241)
T 1dhr_A          145 IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS--M-P-EADFSSWTPLEFLVETFHDWITGNKRPN  220 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH--S-T-TSCGGGSEEHHHHHHHHHHHHTTTTCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccccc--C-c-chhhccCCCHHHHHHHHHHHhcCCCcCc
Confidence            679999999998775         2469999999999987632110  0 0 1112346788999999999887543  3


Q ss_pred             CCCeEEEEe
Q 022495          269 SYKVVEIIS  277 (296)
Q Consensus       269 ~~~~~~i~~  277 (296)
                      .|+.+.+.+
T Consensus       221 ~G~~~~v~g  229 (241)
T 1dhr_A          221 SGSLIQVVT  229 (241)
T ss_dssp             TTCEEEEEE
T ss_pred             cceEEEEeC
Confidence            567777766

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.89  E-value=1.7e-22  Score=174.64  Aligned_cols=203  Identities=15%  Similarity=0.116  Sum_probs=139.3

Q ss_pred             ccCCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|+++||||+|  +||+++++.|+++|++|++++|+.+.......  .....+.++.+|++| .+++.++++.   
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~  104 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD-AESVDNMFKVLAE  104 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCC-HHHHHHHHHHHHH
Confidence            456789999999997  99999999999999999999999653322110  012357899999999 8877776642   


Q ss_pred             ---CCCEEEEcCCCCCC----CC----CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChh
Q 022495          135 ---DSEAVVCATGFQPG----WD----LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~----~~----~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                         ++|+||||||+...    ..    ..+.+..         .++++++...  ..++||++||...+...        
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~--------  176 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV--------  176 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC--------
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC--------
Confidence               49999999997642    11    1111111         4455555432  13599999998765321        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i  259 (296)
                          ..+..|+.+|++++.+.+       ..|+++++|+||++.++.........      ........+.+++|+|+++
T Consensus       177 ----~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  252 (296)
T 3k31_A          177 ----PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAA  252 (296)
T ss_dssp             ----TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             ----CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                235679999999998765       25899999999999997643321100      0001113467899999999


Q ss_pred             HHHhcCC--CCCCCeEEEEe
Q 022495          260 VEALLHP--ESSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~--~~~~~~~~i~~  277 (296)
                      +.++...  ...|+++++.+
T Consensus       253 ~fL~s~~a~~itG~~i~vdG  272 (296)
T 3k31_A          253 LYLLSDLGRGTTGETVHVDC  272 (296)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHcCCccCCccCCEEEECC
Confidence            9988753  24567777755

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.89  E-value=2.2e-22  Score=171.72  Aligned_cols=189  Identities=16%  Similarity=0.107  Sum_probs=134.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHH-CCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhc-------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLA-KGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG-------  133 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~-------  133 (296)
                      ++|+|+||||+||||+++++.|++ +|++|++++|+.++..+..   .....++.++.+|++| .+++.++++       
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence            478999999999999999999999 9999999999976554322   1123578999999999 888877765       


Q ss_pred             CCCCEEEEcCCCCCCCCCc----chhHH---------HHHHHHHHHcC--CCEEEEEccceeccCccC-----------c
Q 022495          134 DDSEAVVCATGFQPGWDLF----APWKA---------INLVEACRKRG--VNRFILISSILVNGAAMG-----------Q  187 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~~----~~~~~---------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~-----------~  187 (296)
                      + +|+||||||........    ..+..         .++++++.+.-  .++||++||..++.....           .
T Consensus        82 ~-id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           82 G-LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             S-EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             C-CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence            5 99999999975432111    11111         66777766542  259999999877632100           0


Q ss_pred             cCChhhh------------------hhhhhHHHHHHHHHHHHHHH-------H----hCCcEEEEecCcccCCCCCCcee
Q 022495          188 ILNPAYI------------------FLNVFGLTLIAKLQAEQYIR-------K----SGINYTIIRPGGLRNEPPTGNII  238 (296)
Q Consensus       188 ~~~~~~~------------------~~~~~~~y~~sK~~~e~~~~-------~----~~~~~~~lrp~~i~g~~~~~~~~  238 (296)
                      ...+...                  +..+...|+.+|++.+.+++       .    .++++++|+||++.++....   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence            1111100                  01123789999999987764       2    48999999999999875332   


Q ss_pred             ecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          239 METEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       239 ~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                              ..+.+++|+|+.++.++..+
T Consensus       238 --------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 --------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             --------TCSBCHHHHTHHHHHHHSCC
T ss_pred             --------cccCChhHhhhhHhhhhcCc
Confidence                    24789999999999999765

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.89  E-value=2.8e-22  Score=173.04  Aligned_cols=201  Identities=14%  Similarity=0.117  Sum_probs=135.0

Q ss_pred             cCCCCeEEEEcCCch--HHHHHHHHHHHCCCeEEEEEcCcchhh---hcccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGS--SGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~--iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ++++|+++||||+|+  ||+++++.|+++|++|++++|+....+   +... ...++.++.+|++| .+++.++++.   
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dv~d-~~~v~~~~~~~~~  105 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAE-ELGAFVAGHCDVAD-AASIDAVFETLEK  105 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHH-HHTCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH-hcCCceEEECCCCC-HHHHHHHHHHHHH
Confidence            567899999999977  999999999999999999999854222   1111 12468899999999 8877776652   


Q ss_pred             ---CCCEEEEcCCCCCC----CC----CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChh
Q 022495          135 ---DSEAVVCATGFQPG----WD----LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~----~~----~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                         ++|+||||||+...    ..    ..+.+..         .++++++...  ..++||++||...+...        
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~--------  177 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM--------  177 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC--------
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC--------
Confidence               49999999997641    11    1111111         4444444332  23699999998765422        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i  259 (296)
                          ..+..|+.+|++.+.+.+       ..|+++++|+||.+.++..........      .......+.+++|+|+++
T Consensus       178 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  253 (293)
T 3grk_A          178 ----PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVG  253 (293)
T ss_dssp             ----TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                235679999999998765       258999999999999875332110000      001113467899999999


Q ss_pred             HHHhcCCC--CCCCeEEEEe
Q 022495          260 VEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~  277 (296)
                      +.++....  ..|+++++.+
T Consensus       254 ~~L~s~~~~~itG~~i~vdG  273 (293)
T 3grk_A          254 LYFLSDLSRSVTGEVHHADS  273 (293)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHcCccccCCcceEEEECC
Confidence            98887532  4566777654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.89  E-value=1.6e-22  Score=167.76  Aligned_cols=185  Identities=13%  Similarity=0.088  Sum_probs=130.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv  140 (296)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+                 +|++| .+++.++++.  ++|+||
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------~D~~~-~~~v~~~~~~~g~id~lv   64 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------LDISD-EKSVYHYFETIGAFDHLI   64 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------CCTTC-HHHHHHHHHHHCSEEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------cCCCC-HHHHHHHHHHhCCCCEEE
Confidence            456899999999999999999999999999999988753                 79999 8888877652  499999


Q ss_pred             EcCCCCCCCC---Cc--chhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          141 CATGFQPGWD---LF--APWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       141 ~~ag~~~~~~---~~--~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      ||||......   ..  +.+..         .++++++...  ..++||++||...+...            .+...|+.
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~~~~~Y~a  132 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV------------ANTYVKAA  132 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC------------TTCHHHHH
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC------------CCchHHHH
Confidence            9999752211   11  11111         4455555443  12589999999765432            23567999


Q ss_pred             HHHHHHHHHH----Hh-CCcEEEEecCcccCCCCCCceeec--------ccCccccCCcCHHHHHHHHHHHhcCCCCCCC
Q 022495          205 AKLQAEQYIR----KS-GINYTIIRPGGLRNEPPTGNIIME--------TEDTLYEGTISRDQVAEVAVEALLHPESSYK  271 (296)
Q Consensus       205 sK~~~e~~~~----~~-~~~~~~lrp~~i~g~~~~~~~~~~--------~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~  271 (296)
                      +|++.+.+.+    +. .++++.|+||.+.++.........        ........+.+++|+|++++.++......|+
T Consensus       133 sK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG~  212 (223)
T 3uce_A          133 INAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTGT  212 (223)
T ss_dssp             HHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCCCCc
Confidence            9999998765    33 399999999999987533221000        0001123467899999999999987666788


Q ss_pred             eEEEEe
Q 022495          272 VVEIIS  277 (296)
Q Consensus       272 ~~~i~~  277 (296)
                      ++++.+
T Consensus       213 ~i~vdg  218 (223)
T 3uce_A          213 VIDVDG  218 (223)
T ss_dssp             EEEEST
T ss_pred             EEEecC
Confidence            888765

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.88  E-value=4.1e-22  Score=169.65  Aligned_cols=206  Identities=14%  Similarity=0.072  Sum_probs=142.4

Q ss_pred             hccCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcchh-h----hcccCCCCCeEEEEcccCCChHHHHHHhc
Q 022495           61 NVSVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKA-K----TTLSKDNPSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      .+++++|+++||||+  |+||++++++|+++|++|++++|+.... .    ++......++.++.+|++| .+++.++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~   93 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDS-YESCEKLVK   93 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTC-HHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCC-HHHHHHHHH
Confidence            356789999999999  9999999999999999999998886543 1    1111124679999999999 787776664


Q ss_pred             C------CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCC
Q 022495          134 D------DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILN  190 (296)
Q Consensus       134 ~------~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~  190 (296)
                      .      ++|+||||||+.......    +.+..             +.+++.+++.+.++||++||...+.....    
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  169 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP----  169 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC----
Confidence            2      489999999975432211    11111             56666677777789999999876432211    


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHH----h--CCcEEEEecCcccCCCCCCcee----ecccCccccCCcCHHHHHHHHH
Q 022495          191 PAYIFLNVFGLTLIAKLQAEQYIRK----S--GINYTIIRPGGLRNEPPTGNII----METEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       191 ~~~~~~~~~~~y~~sK~~~e~~~~~----~--~~~~~~lrp~~i~g~~~~~~~~----~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                            .+...|+.+|++.+.+.+.    .  .++++.|.||.+.++.......    ..........+.+++|+|++++
T Consensus       170 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~  243 (267)
T 3gdg_A          170 ------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYV  243 (267)
T ss_dssp             ------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHH
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhh
Confidence                  1256799999999987752    2  3899999999998865321100    0000111123567999999999


Q ss_pred             HHhcCCC--CCCCeEEEEe
Q 022495          261 EALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~  277 (296)
                      .++....  ..|+++++.+
T Consensus       244 ~l~s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          244 YFASDASTYTTGADLLIDG  262 (267)
T ss_dssp             HHHSTTCTTCCSCEEEEST
T ss_pred             eeecCccccccCCEEEECC
Confidence            8886532  3566676654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.88  E-value=5.2e-22  Score=169.87  Aligned_cols=200  Identities=15%  Similarity=0.172  Sum_probs=136.0

Q ss_pred             CCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcc---hhhhcccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||+  |+||+++++.|+++|++|++++|+.+   ...++.. ...++.++.+|++| .+++.++++.    
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~-~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQ-ELNSPYVYELDVSK-EEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHH-HTTCCCEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            568999999999  99999999999999999999999875   2222211 11347899999999 8877766642    


Q ss_pred             --CCCEEEEcCCCCCC----CC----CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhh
Q 022495          135 --DSEAVVCATGFQPG----WD----LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 --~~d~vv~~ag~~~~----~~----~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                        ++|+||||||....    ..    ....+..         .++++++...  +.++||++||...+..          
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------  151 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY----------  151 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC----------
Confidence              39999999997542    11    1111111         5555655543  1269999999865432          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCccccCCcCHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~  260 (296)
                        ..+...|+.+|++.+.+.+       ..|+++++|+||.+.++..........      .......+.+++|+|++++
T Consensus       152 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~  229 (275)
T 2pd4_A          152 --MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGM  229 (275)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence              1235679999999998764       248999999999999875322100000      0001123678999999999


Q ss_pred             HHhcCCC--CCCCeEEEEe
Q 022495          261 EALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~~  277 (296)
                      .++....  ..|+.+++.+
T Consensus       230 ~l~s~~~~~~tG~~~~vdg  248 (275)
T 2pd4_A          230 YLLSSLSSGVSGEVHFVDA  248 (275)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCccccCCCCCEEEECC
Confidence            9886432  3566666654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.88  E-value=9e-22  Score=166.36  Aligned_cols=201  Identities=16%  Similarity=0.160  Sum_probs=137.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-EcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-VRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +++|+++||||+|+||++++++|+++|++|+++ .|+.+...+..   .....++.++.+|++| .+.+.++++.     
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES-LHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCC-HHHHHHHHHHHHHHh
Confidence            568999999999999999999999999999986 45554433221   1234678899999999 7777665532     


Q ss_pred             -------CCCEEEEcCCCCCCCCCc----chhH----H-----HHHHHHHHHc--CCCEEEEEccceeccCccCccCChh
Q 022495          135 -------DSEAVVCATGFQPGWDLF----APWK----A-----INLVEACRKR--GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 -------~~d~vv~~ag~~~~~~~~----~~~~----~-----~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                             ++|+||||||+.......    ..+.    .     .++++++...  +.++||++||...+...        
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~--------  155 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL--------  155 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC--------
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC--------
Confidence                   299999999975432211    1111    1     4555555443  23599999998765422        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i  259 (296)
                          .....|+.+|++.+.+.+       ..+++++.|+||.+.++.........      ........+.+++|+|+++
T Consensus       156 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  231 (255)
T 3icc_A          156 ----PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTA  231 (255)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             ----CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHH
Confidence                225679999999998764       25899999999999987643321100      0011123467899999999


Q ss_pred             HHHhcCC--CCCCCeEEEEe
Q 022495          260 VEALLHP--ESSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~--~~~~~~~~i~~  277 (296)
                      +.++...  ...|+++++.+
T Consensus       232 ~~l~s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          232 AFLASPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESS
T ss_pred             HHHhCcccCCccCCEEEecC
Confidence            8888643  24567777765

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.88  E-value=2.2e-21  Score=163.98  Aligned_cols=196  Identities=16%  Similarity=0.113  Sum_probs=128.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc--cCCCCCeEEEEcccCCChHHH----HHHhcCCCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL--SKDNPSLQIVKADVTEGSAKL----SEAIGDDSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~----~~~~~~~~d~v  139 (296)
                      ||+++||||+|+||+++++.|+++|++|++++|++++..+..  .....++..+  |..+ .+.+    .+.+.+ +|+|
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~-v~~~~~~~~~~~g~-iD~l   76 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQE-PAELIEAVTSAYGQ-VDVL   76 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCS-HHHHHHHHHHHHSC-CCEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHH-HHHHHHHHHHHhCC-CCEE
Confidence            368999999999999999999999999999999876554321  1112344443  5544 3322    223445 9999


Q ss_pred             EEcCCCC-CCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          140 VCATGFQ-PGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       140 v~~ag~~-~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                      |||||.. ......    +.+..             +.+++.+++.+.++||++||...+...            .....
T Consensus        77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~  144 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW------------KELST  144 (254)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC------------TTCHH
T ss_pred             EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC------------CCchH
Confidence            9999976 321111    11111             566777777777899999998765321            22467


Q ss_pred             HHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee---cc---------cCccccCCcCHHHHHHHHHHH
Q 022495          202 TLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---ET---------EDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       202 y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~---~~---------~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      |+.+|++.+.+.+       ..++++++|+||.++|+........   ..         .......+.+++|+|++++.+
T Consensus       145 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l  224 (254)
T 1zmt_A          145 YTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFL  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence            9999999997764       2589999999999965432211100   00         000112367899999999998


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +..+.  ..|+.+.+.+
T Consensus       225 ~s~~~~~~tG~~~~vdg  241 (254)
T 1zmt_A          225 ASGSCDYLTGQVFWLAG  241 (254)
T ss_dssp             HTTSCGGGTTCEEEEST
T ss_pred             hCcccCCccCCEEEECC
Confidence            87543  3567777655

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.87  E-value=3.3e-21  Score=167.34  Aligned_cols=192  Identities=20%  Similarity=0.225  Sum_probs=133.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----cCCCCCeEEEEcccCCCh-HHHHHHh-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKDNPSLQIVKADVTEGS-AKLSEAI-----  132 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~D~~d~~-~~~~~~~-----  132 (296)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.++..+..    .....++.++.+|++| . +.+.+++     
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~v~~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD-PIATMSSLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS-CHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC-cHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999987654322    2123579999999999 6 6555544     


Q ss_pred             --cCCCCEEEEcCCCCCCCC----------------------------------Ccch----hHH---------HHHHHH
Q 022495          133 --GDDSEAVVCATGFQPGWD----------------------------------LFAP----WKA---------INLVEA  163 (296)
Q Consensus       133 --~~~~d~vv~~ag~~~~~~----------------------------------~~~~----~~~---------~~~l~~  163 (296)
                        .+ +|+||||||+.....                                  ..+.    ..+         +.+++.
T Consensus        88 ~~g~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           88 HFGK-LDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHSS-CCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             hCCC-CCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence              35 999999999753210                                  0000    011         666666


Q ss_pred             HHHcCCCEEEEEccceeccCccCc-----------cCChh--------------------hhhhhhhHHHHHHHHHHHHH
Q 022495          164 CRKRGVNRFILISSILVNGAAMGQ-----------ILNPA--------------------YIFLNVFGLTLIAKLQAEQY  212 (296)
Q Consensus       164 ~~~~~~~~iV~~SS~~~~~~~~~~-----------~~~~~--------------------~~~~~~~~~y~~sK~~~e~~  212 (296)
                      +++.+.++||++||...+......           .+...                    .....+...|+.+|++.+.+
T Consensus       167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred             hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence            777777899999998764322110           00000                    00012346799999999987


Q ss_pred             HHH-----hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          213 IRK-----SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       213 ~~~-----~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      .+.     .+++++.|+||++.++...+           .+....++.|+.++.++..+.
T Consensus       247 ~~~la~e~~~i~v~~v~PG~v~T~~~~~-----------~~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          247 TRVLANKIPKFQVNCVCPGLVKTEMNYG-----------IGNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHHHHHCTTSEEEEECCCSBCSGGGTT-----------CCSBCHHHHHHHHHHHHTCCS
T ss_pred             HHHHHhhcCCceEEEecCCceecCCcCC-----------CCCCCHHHHHHHHHHHHhCCC
Confidence            752     36999999999998864221           134689999999999888665

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.87  E-value=1.3e-21  Score=171.27  Aligned_cols=189  Identities=17%  Similarity=0.202  Sum_probs=130.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc---cc------CCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LS------KDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~------~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      +|+|+||||+|+||++++++|+++|++|++++|+..+....   ..      ....++.++.+|++| .+++.++++.  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD-SKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC-HHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCC-HHHHHHHHHHHh
Confidence            67999999999999999999999999999888765433211   10      123578999999999 8888888764  


Q ss_pred             --CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||+......    .+.+..             +.+++.|++.+.++||++||...+...           
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~-----------  149 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----------  149 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----------
Confidence              49999999997532211    111111             555666777777899999998765321           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----ccC--------cc-------ccC
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TED--------TL-------YEG  248 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~--------~~-------~~~  248 (296)
                       .....|+.+|++++.+.+       ..|+++++|+||.+.++.........     ...        ..       ...
T Consensus       150 -~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (327)
T 1jtv_A          150 -PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFRE  228 (327)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhh
Confidence             124579999999998764       26899999999999987633211000     000        00       001


Q ss_pred             -CcCHHHHHHHHHHHhcCCC
Q 022495          249 -TISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       249 -~i~~~Dva~~i~~~l~~~~  267 (296)
                       .++++|+|++++.++..+.
T Consensus       229 ~~~~pedvA~~i~~l~~~~~  248 (327)
T 1jtv_A          229 AAQNPEEVAEVFLTALRAPK  248 (327)
T ss_dssp             HCBCHHHHHHHHHHHHHCSS
T ss_pred             cCCCHHHHHHHHHHHHcCCC
Confidence             2589999999999988653

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.86  E-value=9.8e-22  Score=171.48  Aligned_cols=193  Identities=16%  Similarity=0.129  Sum_probs=128.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc---------CcchhhhcccC-CCCCeEEEEcccCCChHHHHHH
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR---------DLDKAKTTLSK-DNPSLQIVKADVTEGSAKLSEA  131 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~  131 (296)
                      +++++|+++||||+|+||+++++.|+++|++|++.+|         +.++..+.... .... ....+|++| .+.+.++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-~~~~~D~~~-~~~~~~~   82 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-GKAVANYDS-VEAGEKL   82 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-CEEEEECCC-GGGHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC-CeEEEeCCC-HHHHHHH
Confidence            4567899999999999999999999999999999755         44333321110 0011 123589998 6655444


Q ss_pred             h-------cCCCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEcccee-ccCccC
Q 022495          132 I-------GDDSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILV-NGAAMG  186 (296)
Q Consensus       132 ~-------~~~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~-~~~~~~  186 (296)
                      +       .+ +|+||||||+......    ...+..             +.+++.+++.+.++||++||... ++.   
T Consensus        83 ~~~~~~~~g~-iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~---  158 (319)
T 1gz6_A           83 VKTALDTFGR-IDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN---  158 (319)
T ss_dssp             HHHHHHHTSC-CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---
T ss_pred             HHHHHHHcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC---
Confidence            3       34 9999999997543211    111111             66667777777789999999754 321   


Q ss_pred             ccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHH
Q 022495          187 QILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       187 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                                .+...|+.+|++.+.+.+       ..|+++++|+||.+ ++.....  .   ......+++++|+|+++
T Consensus       159 ----------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~--~---~~~~~~~~~p~dvA~~~  222 (319)
T 1gz6_A          159 ----------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV--M---PEDLVEALKPEYVAPLV  222 (319)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG--S---CHHHHHHSCGGGTHHHH
T ss_pred             ----------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc--C---ChhhhccCCHHHHHHHH
Confidence                      125679999999997764       25899999999987 5432111  0   11112357899999999


Q ss_pred             HHHhcCCC-CCCCeEEEE
Q 022495          260 VEALLHPE-SSYKVVEII  276 (296)
Q Consensus       260 ~~~l~~~~-~~~~~~~i~  276 (296)
                      +.++..+. ..|+.+++.
T Consensus       223 ~~l~s~~~~~tG~~~~v~  240 (319)
T 1gz6_A          223 LWLCHESCEENGGLFEVG  240 (319)
T ss_dssp             HHHTSTTCCCCSCEEEEE
T ss_pred             HHHhCchhhcCCCEEEEC
Confidence            98887643 245666653

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.86  E-value=4.3e-22  Score=168.83  Aligned_cols=191  Identities=13%  Similarity=0.098  Sum_probs=130.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHH---CCCeEEEEEcCcchhhhcccC-----CCCCeEEEEcccCCChHHHHHHhc
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLA---KGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      +++++|+++||||+|+||++++++|++   +|++|++++|+++...+....     ...++.++.+|++| .+++.++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~   80 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT-EAGVQRLLS   80 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS-HHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC-HHHHHHHHH
Confidence            356789999999999999999999999   899999999998765533211     13568999999999 777766553


Q ss_pred             C--------CCC--EEEEcCCCCCCC-------CCcchhHH---------HHHHHHH----HHc--CCCEEEEEccceec
Q 022495          134 D--------DSE--AVVCATGFQPGW-------DLFAPWKA---------INLVEAC----RKR--GVNRFILISSILVN  181 (296)
Q Consensus       134 ~--------~~d--~vv~~ag~~~~~-------~~~~~~~~---------~~~l~~~----~~~--~~~~iV~~SS~~~~  181 (296)
                      .        ++|  +||||||+....       ...+.+..         .++++++    ++.  +.++||++||...+
T Consensus        81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
T 1oaa_A           81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence            1        378  999999975321       11111111         3344444    343  44689999999765


Q ss_pred             cCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH-----hCCcEEEEecCcccCCCCCCcee---ecc-----cC-cccc
Q 022495          182 GAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-----SGINYTIIRPGGLRNEPPTGNII---MET-----ED-TLYE  247 (296)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-----~~~~~~~lrp~~i~g~~~~~~~~---~~~-----~~-~~~~  247 (296)
                      ...            .+...|+.+|++.+.+.+.     .+++++.|+||.+.++.......   ...     .. ....
T Consensus       161 ~~~------------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~  228 (259)
T 1oaa_A          161 QPY------------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDG  228 (259)
T ss_dssp             SCC------------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTT
T ss_pred             CCC------------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcC
Confidence            321            2356799999999987753     25999999999998764211000   000     00 0013


Q ss_pred             CCcCHHHHHHHHHHHhcC
Q 022495          248 GTISRDQVAEVAVEALLH  265 (296)
Q Consensus       248 ~~i~~~Dva~~i~~~l~~  265 (296)
                      .+.+++|+|++++.++..
T Consensus       229 ~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          229 ALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             CSBCHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHhh
Confidence            478999999999998864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.86  E-value=4e-21  Score=161.48  Aligned_cols=195  Identities=15%  Similarity=0.094  Sum_probs=128.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEE-E--cCcchhhhcccCCCCCeEEEEcccCCChHHHH-H---HhcCCCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAG-V--RDLDKAKTTLSKDNPSLQIVKADVTEGSAKLS-E---AIGDDSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~---~~~~~~d~  138 (296)
                      +|+++||||+|+||+++++.|+++|++|+++ +  |++++..+..... .+..+.  |..+ .+.+. +   .+.+ +|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~~~~~--~~~~-v~~~~~~~~~~~g~-iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PGTIAL--AEQK-PERLVDATLQHGEA-IDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TTEEEC--CCCC-GGGHHHHHGGGSSC-EEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CCCccc--CHHH-HHHHHHHHHHHcCC-CCE
Confidence            4789999999999999999999999999999 6  9877665433211 122222  4443 32222 2   2334 999


Q ss_pred             EEEcCCCCCC---CCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          139 VVCATGFQPG---WDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       139 vv~~ag~~~~---~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      ||||||....   ...    .+.+..             +.+++.+++.+.++||++||...+...            ..
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~  143 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL------------AY  143 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC------------TT
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC------------CC
Confidence            9999997543   111    111111             666777777777899999998765432            12


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCC---CCce---eecc--c-CccccCCcCHHHHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP---TGNI---IMET--E-DTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~---~~~~---~~~~--~-~~~~~~~i~~~Dva~~i~~~  262 (296)
                      ...|+.+|++.+.+.+       ..++++++|+||.+.++..   ....   ....  . ......+.+++|+|++++.+
T Consensus       144 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l  223 (244)
T 1zmo_A          144 NPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFL  223 (244)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            4569999999998764       2589999999999998764   2110   0000  0 01112467899999999998


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +....  ..|+.+.+.+
T Consensus       224 ~s~~~~~~tG~~i~vdg  240 (244)
T 1zmo_A          224 ASRRAAPIVGQFFAFTG  240 (244)
T ss_dssp             HTTTTGGGTTCEEEEST
T ss_pred             cCccccCccCCEEEeCC
Confidence            87543  3466666544

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.86  E-value=2.9e-21  Score=164.70  Aligned_cols=198  Identities=16%  Similarity=0.142  Sum_probs=132.9

Q ss_pred             cCCCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEcCcchh-hhcccCCCCCeEEEEcccCCChHHHHHHhc------
Q 022495           63 SVKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KTTLSKDNPSLQIVKADVTEGSAKLSEAIG------  133 (296)
Q Consensus        63 ~~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------  133 (296)
                      ++++|+++||||  +|+||+++++.|+++|++|++++|+.++. .+.......++.++.+|++| .+++.++++      
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN-EEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCC-HHHHHHHHHHHHHHh
Confidence            356899999999  99999999999999999999999987653 33332223468899999999 787776664      


Q ss_pred             ----CCCCEEEEcCCCCCC-----CC----CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccC
Q 022495          134 ----DDSEAVVCATGFQPG-----WD----LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       134 ----~~~d~vv~~ag~~~~-----~~----~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~  189 (296)
                          + +|+||||||....     ..    ..+.+..         .++++++...  ..++||++||...++       
T Consensus        83 g~~~~-iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-------  154 (269)
T 2h7i_A           83 GAGNK-LDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-------  154 (269)
T ss_dssp             CTTCC-EEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-------
T ss_pred             CCCCC-ceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-------
Confidence                5 9999999997541     11    1111111         4455555432  125999999975422       


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCC-------cee-------ec-ccCcccc
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTG-------NII-------ME-TEDTLYE  247 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~-------~~~-------~~-~~~~~~~  247 (296)
                            ...+..|+.+|++.+.+.+       ..|+++++|+||.+.++....       ...       .. .......
T Consensus       155 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  228 (269)
T 2h7i_A          155 ------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI  228 (269)
T ss_dssp             ------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT
T ss_pred             ------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc
Confidence                  1235679999999997764       258999999999998763110       000       00 0001111


Q ss_pred             --CCcCHHHHHHHHHHHhcCCC--CCCCeEEE
Q 022495          248 --GTISRDQVAEVAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       248 --~~i~~~Dva~~i~~~l~~~~--~~~~~~~i  275 (296)
                        .+..++|+|++++.++....  ..|+++.+
T Consensus       229 ~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~v  260 (269)
T 2h7i_A          229 GWNMKDATPVAKTVCALLSDWLPATTGDIIYA  260 (269)
T ss_dssp             CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEE
T ss_pred             ccCCCCHHHHHHHHHHHhCchhccCcceEEEe
Confidence              36789999999998886432  23444444

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.85  E-value=1.1e-20  Score=172.19  Aligned_cols=201  Identities=17%  Similarity=0.097  Sum_probs=134.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch--hhhcccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+...  ..+..  ...++.++.+|++| .+++.++++.     
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~--~~~~~~~~~~Dvtd-~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVA--DKVGGTALTLDVTA-DDAVDKITAHVTEHH  285 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH--HHHTCEEEECCTTS-TTHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHH--HHcCCeEEEEecCC-HHHHHHHHHHHHHHc
Confidence            34678999999999999999999999999999999987532  22211  11356799999999 7777766642     


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhHH---------HHHHHHHHHc----CCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWKA---------INLVEACRKR----GVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~~---------~~~l~~~~~~----~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|+||||||+.......    +.+..         .++.+++...    +.++||++||+..+...           
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~-----------  354 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN-----------  354 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC-----------
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC-----------
Confidence              399999999986543211    11111         5666666554    56799999998754322           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc----cCccccCCcCHHHHHHHHHHHhc
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET----EDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~----~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                       .....|+.+|++.+.+.+       ..|+++++|.||++.++..........    .......+..++|+|++++.++.
T Consensus       355 -~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s  433 (454)
T 3u0b_A          355 -RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFAS  433 (454)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHHC
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhC
Confidence             225679999998887664       358999999999999875432111000    00111235689999999988876


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      ...  ..|+++++.+
T Consensus       434 ~~a~~itG~~i~vdG  448 (454)
T 3u0b_A          434 PASNAVTGNTIRVCG  448 (454)
T ss_dssp             GGGTTCCSCEEEESS
T ss_pred             CccCCCCCcEEEECC
Confidence            432  3556666654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.84  E-value=3.6e-20  Score=170.14  Aligned_cols=190  Identities=19%  Similarity=0.167  Sum_probs=133.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcchh---h---hcccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKA---K---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~---~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+++||||||+|+||.+++++|+++|++ |++++|+....   .   +.+.....++.++.+|++| .+.+.+++++   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d-~~~v~~~~~~i~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD-RESVRELLGGIGD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHTSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHHHHHh
Confidence            4689999999999999999999999985 99999986421   1   1122234678999999999 8988888865   


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chh------HH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APW------KA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~------~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                        ++|+||||||........    ...      +.   .++.+++++.+.++||++||+..+....+            .
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g------------~  371 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG------------L  371 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT------------C
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC------------C
Confidence              359999999975432111    111      11   78888888888899999999865322211            3


Q ss_pred             HHHHHHHHHHHHHHH---HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          200 GLTLIAKLQAEQYIR---KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ..|+.+|...+.+.+   ..|+++++|+||.+.+..-...............+++++|+++++..++..+.
T Consensus       372 ~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~~~~~~~~~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          372 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchhHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            568899999987654   56999999999998875211111111111112347999999999999998654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.83  E-value=7.5e-20  Score=168.77  Aligned_cols=189  Identities=17%  Similarity=0.176  Sum_probs=133.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchh---h---hcccCCCCCeEEEEcccCCChHHHHHHhcC-CC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA---K---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~  136 (296)
                      .+++||||||+|+||.+++++|+++|+ +|++++|+....   .   +.+.....++.++.+|++| .+.+.+++++ ++
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~~~l  336 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE-RDALAALVTAYPP  336 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC-HHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHhcCCC
Confidence            468999999999999999999999998 588889986421   1   1122234578999999999 8999888853 59


Q ss_pred             CEEEEcCCCCCCCCCc----chhH------H---HHHHHHHHHc-CCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          137 EAVVCATGFQPGWDLF----APWK------A---INLVEACRKR-GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~------~---~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |+||||||+.......    ..+.      .   .++.+++... +.++||++||+..+-..            .....|
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~------------~g~~~Y  404 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN------------AGQGAY  404 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC------------TTBHHH
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC------------CCCHHH
Confidence            9999999976532111    1111      1   6677777665 67899999998643221            124679


Q ss_pred             HHHHHHHHHHHH---HhCCcEEEEecCccc-CCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          203 LIAKLQAEQYIR---KSGINYTIIRPGGLR-NEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       203 ~~sK~~~e~~~~---~~~~~~~~lrp~~i~-g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +.+|...+.+.+   ..|+++++|+||.+. +.+..... ..........+++++|+++++..++..+.
T Consensus       405 aaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~-~~~~~~~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          405 AAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAG-EESLSRRGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHH-HHHHHHHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEECCcccCCccccccc-HHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999998775   469999999999883 33322210 00001112357999999999999997653

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.81  E-value=8e-20  Score=172.47  Aligned_cols=194  Identities=14%  Similarity=0.088  Sum_probs=124.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc---------Ccchhhhcc---cCCCCCeEEEEcccCCChHHHH
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR---------DLDKAKTTL---SKDNPSLQIVKADVTEGSAKLS  129 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~  129 (296)
                      .++++|+++||||+|+||+++|+.|+++|++|++++|         +.+......   ......   +.+|++| .+++.
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~D~~d-~~~~~   90 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE---AVADYNS-VIDGA   90 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC---EEECCCC-GGGHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe---EEEEeCC-HHHHH
Confidence            4678999999999999999999999999999999988         333332211   111122   3479998 77777


Q ss_pred             HHhcC------CCCEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccC
Q 022495          130 EAIGD------DSEAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMG  186 (296)
Q Consensus       130 ~~~~~------~~d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~  186 (296)
                      ++++.      ++|+||||||+......    .+.+..             +.+++.|++.+.++||++||...+...  
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~--  168 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN--  168 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC--
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC--
Confidence            66653      49999999997543221    111111             667777788877899999998654221  


Q ss_pred             ccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHH
Q 022495          187 QILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       187 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                                .....|+++|++++.+.+       ..|+++++|.||.+ +......     ........+.++|+|.++
T Consensus       169 ----------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~-----~~~~~~~~~~pedvA~~v  232 (613)
T 3oml_A          169 ----------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGI-----LPDILFNELKPKLIAPVV  232 (613)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC-----CCHHHHTTCCGGGTHHHH
T ss_pred             ----------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhc-----cchhhhhcCCHHHHHHHH
Confidence                      125679999999997764       35899999999964 3221111     111123457899999998


Q ss_pred             HHHhcCCC-CCCCeEEEEe
Q 022495          260 VEALLHPE-SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~-~~~~~~~i~~  277 (296)
                      +.++.... ..|+++++.+
T Consensus       233 ~~L~s~~~~~tG~~i~vdG  251 (613)
T 3oml_A          233 AYLCHESCEDNGSYIESAA  251 (613)
T ss_dssp             HHTTSTTCCCCSCEEEEET
T ss_pred             HHhcCCCcCCCceEEEECC
Confidence            88776542 3466666643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.79  E-value=2.1e-18  Score=162.22  Aligned_cols=195  Identities=17%  Similarity=0.097  Sum_probs=130.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhhcccCCCCCeEEEEccc-CCChHHH----HHHhcCCC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTLSKDNPSLQIVKADV-TEGSAKL----SEAIGDDS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~D~-~d~~~~~----~~~~~~~~  136 (296)
                      ++++|+++||||+++||+++++.|+++|++|++.+|.. +...+.+.....++..+.+|+ .+ .+.+    .+.+.. +
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~-~~~~~~~~~~~~G~-i  396 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKD-SEAIIKNVIDKYGT-I  396 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHH-HHHHHHHHHHHHSC-C
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHH-HHHHHHHHHHhcCC-C
Confidence            57789999999999999999999999999999988632 222222221234577788899 66 4432    233455 9


Q ss_pred             CEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||+.....    ..+.+..             +.+++.|++.+.++||++||...+...            ...
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~------------~~~  464 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN------------FGQ  464 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC------------TTB
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC------------CCC
Confidence            99999999754321    1111211             788888888777899999998653221            124


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC-CCCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE-SSYK  271 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~-~~~~  271 (296)
                      ..|+++|+++..+.+       .+|++++.|.||. .++......  ..  . ......++|+|.+++.++.... ..|+
T Consensus       465 ~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~--~~--~-~~~~~~pe~vA~~v~~L~s~~~~itG~  538 (604)
T 2et6_A          465 ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIM--RE--Q-DKNLYHADQVAPLLVYLGTDDVPVTGE  538 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------CCSSCGGGTHHHHHHTTSTTCCCCSC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccC--ch--h-hccCCCHHHHHHHHHHHhCCccCCCCc
Confidence            679999999987664       3699999999994 554322111  11  1 1234689999999887775432 3556


Q ss_pred             eEEEEe
Q 022495          272 VVEIIS  277 (296)
Q Consensus       272 ~~~i~~  277 (296)
                      ++.+.+
T Consensus       539 ~~~vdG  544 (604)
T 2et6_A          539 TFEIGG  544 (604)
T ss_dssp             EEEEET
T ss_pred             EEEECC
Confidence            666543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.79  E-value=9.3e-19  Score=160.44  Aligned_cols=189  Identities=15%  Similarity=0.117  Sum_probs=133.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchh---hh---cccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA---KT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++|||||+|+||.+++++|+++|+ +|+++.|+....   .+   .+.....++.++.+|++| .+.+.++++.    
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAAD-REALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHh
Confidence            58999999999999999999999998 788888874321   11   122245679999999999 8988888764    


Q ss_pred             -CCCEEEEcCCCC-CCCCC--cch--hHH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          135 -DSEAVVCATGFQ-PGWDL--FAP--WKA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       135 -~~d~vv~~ag~~-~~~~~--~~~--~~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                       ++|+||||||+. .....  ...  +..         .++.+.+...+.++||++||+..+-..            ...
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~------------~g~  385 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS------------GGQ  385 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC------------TTC
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC------------CCc
Confidence             489999999976 32211  111  111         788888888888899999998754322            124


Q ss_pred             HHHHHHHHHHHHHHH---HhCCcEEEEecCcccCCCCCCcee-ecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          200 GLTLIAKLQAEQYIR---KSGINYTIIRPGGLRNEPPTGNII-METEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~---~~~~~~~~lrp~~i~g~~~~~~~~-~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ..|+++|...+.+.+   ..|+++++|.||.+.+........ ...........+++++.++++..++..+.
T Consensus       386 ~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          386 PGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHHHcCCC
Confidence            679999999987764   479999999999887643221110 00000111235789999999998887654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.79  E-value=6.3e-19  Score=163.23  Aligned_cols=190  Identities=15%  Similarity=0.081  Sum_probs=131.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEE-EcCcch-------------hhhc---ccCCCCCeEEEEcccCCChH
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAG-VRDLDK-------------AKTT---LSKDNPSLQIVKADVTEGSA  126 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~~~---~~~~~~~~~~~~~D~~d~~~  126 (296)
                      +++++|||||+|+||.+++++|+++|++ |+++ +|+...             ..+.   +.....++.++.+|++| .+
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd-~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD-AE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS-HH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC-HH
Confidence            4789999999999999999999999987 5555 787422             1111   11134579999999999 88


Q ss_pred             HHHHHhcC-----CCCEEEEcCCCCCCCCCc--ch--h------HH---HHHHHHHHHcC-----CCEEEEEccceeccC
Q 022495          127 KLSEAIGD-----DSEAVVCATGFQPGWDLF--AP--W------KA---INLVEACRKRG-----VNRFILISSILVNGA  183 (296)
Q Consensus       127 ~~~~~~~~-----~~d~vv~~ag~~~~~~~~--~~--~------~~---~~~l~~~~~~~-----~~~iV~~SS~~~~~~  183 (296)
                      .+.+++..     ++|+||||||+.......  ..  +      +.   .++.+++....     .++||++||+..+-.
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            88888764     489999999976532211  11  1      11   56666665554     689999999876433


Q ss_pred             ccCccCChhhhhhhhhHHHHHHHHHHHHHHH---HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHH
Q 022495          184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIR---KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                      ..            ....|+++|...+.+.+   ..|+++++|.||.+.+++.................++++++++++.
T Consensus       409 ~~------------g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~  476 (525)
T 3qp9_A          409 GA------------GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPLAPATALTALD  476 (525)
T ss_dssp             CT------------TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHH
T ss_pred             CC------------CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccchhhHHHHHhcCCCCCCHHHHHHHHH
Confidence            22            24679999999998875   3689999999999955432111100001111124689999999999


Q ss_pred             HHhcCCC
Q 022495          261 EALLHPE  267 (296)
Q Consensus       261 ~~l~~~~  267 (296)
                      .++..+.
T Consensus       477 ~~l~~~~  483 (525)
T 3qp9_A          477 TALGHGD  483 (525)
T ss_dssp             HHHHHTC
T ss_pred             HHHhCCC
Confidence            9997653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.78  E-value=1.2e-17  Score=144.30  Aligned_cols=203  Identities=17%  Similarity=0.166  Sum_probs=122.7

Q ss_pred             ccCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCc-----------chhhhcccCCCCC----eEEEEccc---
Q 022495           62 VSVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDL-----------DKAKTTLSKDNPS----LQIVKADV---  121 (296)
Q Consensus        62 ~~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~----~~~~~~D~---  121 (296)
                      +++++|+++||||+  |+||+++++.|+++|++|++++|++           ++..+........    ...+.+|+   
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            35678999999999  9999999999999999999998652           1111111000011    23444432   


Q ss_pred             -----C----CC-------hHHHHH-------HhcCCCCEEEEcCCCCC--CCC----CcchhHH---------HHHHHH
Q 022495          122 -----T----EG-------SAKLSE-------AIGDDSEAVVCATGFQP--GWD----LFAPWKA---------INLVEA  163 (296)
Q Consensus       122 -----~----d~-------~~~~~~-------~~~~~~d~vv~~ag~~~--~~~----~~~~~~~---------~~~l~~  163 (296)
                           .    |+       .+++.+       .+.+ +|+||||||+..  ...    ..+.+..         .+++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~-iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGS-IDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSC-EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCC-CCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 1    10       112222       3345 999999998632  111    1111111         455555


Q ss_pred             HHHc--CCCEEEEEccceeccCccCccCChhhhhhhhh-HHHHHHHHHHHHHHH--------HhCCcEEEEecCcccCCC
Q 022495          164 CRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVF-GLTLIAKLQAEQYIR--------KSGINYTIIRPGGLRNEP  232 (296)
Q Consensus       164 ~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~-~~y~~sK~~~e~~~~--------~~~~~~~~lrp~~i~g~~  232 (296)
                      +...  ..++||++||...+....            .. ..|+.+|++.+.+.+        +.|+++++|+||.+.++.
T Consensus       163 ~~~~m~~~g~iv~isS~~~~~~~~------------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~  230 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASERIIP------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA  230 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCT------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred             HHHHhccCceEEEEeccccccCCC------------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccch
Confidence            5432  126999999987543211            12 369999999987653        269999999999999986


Q ss_pred             CCCceeecc------cCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          233 PTGNIIMET------EDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       233 ~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      .........      .......+.+++|+|++++.++....  ..|+.+++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdg  283 (297)
T 1d7o_A          231 AKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             SSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            433100000      00011236789999999988876432  3466666654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.77  E-value=1.1e-18  Score=152.84  Aligned_cols=152  Identities=16%  Similarity=0.175  Sum_probs=101.4

Q ss_pred             CCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCc---------chhh---hcccC---CCCCeEEEEcccCCCh--H
Q 022495           66 QKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDL---------DKAK---TTLSK---DNPSLQIVKADVTEGS--A  126 (296)
Q Consensus        66 ~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~---~~~~~---~~~~~~~~~~D~~d~~--~  126 (296)
                      +|+++||||++  +||+++|++|+++|++|++.+|++         ++..   .....   ....+.++.+|+++ .  +
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~   80 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASF-DTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTC-SSGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccc-cchh
Confidence            68999999975  999999999999999999777654         2111   11111   12347888999987 5  5


Q ss_pred             ------------------HHHHHhcC------CCCEEEEcCCCCC--CCCC----cchhHH-------------HHHHHH
Q 022495          127 ------------------KLSEAIGD------DSEAVVCATGFQP--GWDL----FAPWKA-------------INLVEA  163 (296)
Q Consensus       127 ------------------~~~~~~~~------~~d~vv~~ag~~~--~~~~----~~~~~~-------------~~~l~~  163 (296)
                                        ++.++++.      ++|++|||||+..  ....    ...+..             +.+++.
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              44444332      4999999999632  1111    111111             334444


Q ss_pred             HHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH-HHHHHHHHHHHHHH-------H-hCCcEEEEecCcccCCC
Q 022495          164 CRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG-LTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEP  232 (296)
Q Consensus       164 ~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~-~y~~sK~~~e~~~~-------~-~~~~~~~lrp~~i~g~~  232 (296)
                      |++.  ++||++||...+...            .... .|+.+|++.+.+.+       . .+++++.|.||++.++.
T Consensus       161 m~~~--g~Iv~isS~~~~~~~------------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~  224 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVV------------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA  224 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCC------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_pred             HhhC--CeEEEEeCccccCCC------------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechh
Confidence            4443  699999998754321            1132 69999999987653       4 69999999999998763

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.75  E-value=9.5e-18  Score=157.81  Aligned_cols=191  Identities=16%  Similarity=0.071  Sum_probs=123.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc---------chhhhc---ccCCCCCeEEEEcccCCChHH---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL---------DKAKTT---LSKDNPSLQIVKADVTEGSAK---  127 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~---~~~~~~~~~~~~~D~~d~~~~---  127 (296)
                      ++++|+++||||+++||+++++.|+++|++|++.+|+.         +...+.   +......+   .+|+.| .+.   
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d-~~~~~~   80 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNN-VLDGDK   80 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCC-TTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCC-HHHHHH
Confidence            46789999999999999999999999999999988764         332221   11112222   256666 322   


Q ss_pred             ----HHHHhcCCCCEEEEcCCCCCCCC----CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccC
Q 022495          128 ----LSEAIGDDSEAVVCATGFQPGWD----LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMG  186 (296)
Q Consensus       128 ----~~~~~~~~~d~vv~~ag~~~~~~----~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~  186 (296)
                          +.+.++. +|++|||||+.....    ..+.+..             +.+++.|++.+.++||++||....-..  
T Consensus        81 ~v~~~~~~~G~-iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~--  157 (604)
T 2et6_A           81 IVETAVKNFGT-VHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN--  157 (604)
T ss_dssp             HHHHHHHHHSC-CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC--
T ss_pred             HHHHHHHHcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC--
Confidence                2233455 999999999754221    1111111             888888888777899999998643211  


Q ss_pred             ccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHH
Q 022495          187 QILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       187 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                                .....|+++|+++..+.+       .+|++++.|.|| +.++.....     ..........++|+|.++
T Consensus       158 ----------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~-----~~~~~~~~~~pe~vA~~v  221 (604)
T 2et6_A          158 ----------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESI-----MPPPMLEKLGPEKVAPLV  221 (604)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTT-----SCHHHHTTCSHHHHHHHH
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcccccc-----CChhhhccCCHHHHHHHH
Confidence                      124579999999987764       369999999997 443221110     001112346899999999


Q ss_pred             HHHhcCCC-CCCCeEEEE
Q 022495          260 VEALLHPE-SSYKVVEII  276 (296)
Q Consensus       260 ~~~l~~~~-~~~~~~~i~  276 (296)
                      +.++.... ..|+++.+.
T Consensus       222 ~~L~s~~~~itG~~~~vd  239 (604)
T 2et6_A          222 LYLSSAENELTGQFFEVA  239 (604)
T ss_dssp             HHHTSSSCCCCSCEEEEE
T ss_pred             HHHhCCcccCCCCEEEEC
Confidence            88886542 245555554

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.74  E-value=2.3e-17  Score=143.88  Aligned_cols=202  Identities=17%  Similarity=0.166  Sum_probs=104.9

Q ss_pred             cCCCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEcCc-----------chhhhc--------------ccCCC---C
Q 022495           63 SVKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDL-----------DKAKTT--------------LSKDN---P  112 (296)
Q Consensus        63 ~~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~--------------~~~~~---~  112 (296)
                      ++++|+++||||  +|+||+++++.|+++|++|++++|++           ++..+.              +....   .
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            467899999999  89999999999999999999998742           111110              00000   0


Q ss_pred             CeEEEEccc------------CCC-------hHHHHH-------HhcCCCCEEEEcCCCCC--CCC----CcchhHH---
Q 022495          113 SLQIVKADV------------TEG-------SAKLSE-------AIGDDSEAVVCATGFQP--GWD----LFAPWKA---  157 (296)
Q Consensus       113 ~~~~~~~D~------------~d~-------~~~~~~-------~~~~~~d~vv~~ag~~~--~~~----~~~~~~~---  157 (296)
                      ...++.+|+            +|.       .+++.+       .+.. +|+||||||+..  ...    ....+..   
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~-iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQ-IDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSC-EEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCC-CCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence            135555443            220       112332       2345 999999999642  111    1111111   


Q ss_pred             ------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhhhh-HHHHHHHHHHHHHHH-------H-hCCcE
Q 022495          158 ------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVF-GLTLIAKLQAEQYIR-------K-SGINY  220 (296)
Q Consensus       158 ------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~-~~y~~sK~~~e~~~~-------~-~~~~~  220 (296)
                            .++++++...  ..++||++||...+...            ... ..|+.+|++++.+.+       . +|+++
T Consensus       165 vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrv  232 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI------------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRV  232 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------------THHHHHHHHHHHHHHHCCEE
T ss_pred             HhhHHHHHHHHHHHHHHhcCceEEEEecccccccc------------CccchhhHHHHHHHHHHHHHHHHHhccccCeeE
Confidence                  4445554432  12699999998654321            112 469999998887653       2 69999


Q ss_pred             EEEecCcccCCCCCCcee-----e-cc------cCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          221 TIIRPGGLRNEPPTGNII-----M-ET------EDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       221 ~~lrp~~i~g~~~~~~~~-----~-~~------~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      ++|+||++.++.......     . ..      .......+.+++|+|++++.++....  ..|+.+.+.+
T Consensus       233 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG  303 (319)
T 2ptg_A          233 NCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDN  303 (319)
T ss_dssp             EEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             EEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence            999999998875322100     0 00      00011236789999999998886422  3455665544

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.74  E-value=1.3e-17  Score=145.20  Aligned_cols=203  Identities=17%  Similarity=0.180  Sum_probs=120.0

Q ss_pred             ccCCCCeEEEEcC--CchHHHHHHHHHHHCCCeEEEEEcCcc-----------hhhhcccC-CCC---CeEEEEccc---
Q 022495           62 VSVKQKKIFVAGA--TGSSGKRIVEQLLAKGFAVKAGVRDLD-----------KAKTTLSK-DNP---SLQIVKADV---  121 (296)
Q Consensus        62 ~~~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~-----------~~~~~~~~-~~~---~~~~~~~D~---  121 (296)
                      +++++|+++||||  +|+||+++++.|+++|++|++++|++.           +..+.... ...   .+.++.+|+   
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            3467899999999  899999999999999999999987531           11111100 111   134544443   


Q ss_pred             ---------CC-------ChHHHHH-------HhcCCCCEEEEcCCCCC--CCCC----cchhHH---------HHHHHH
Q 022495          122 ---------TE-------GSAKLSE-------AIGDDSEAVVCATGFQP--GWDL----FAPWKA---------INLVEA  163 (296)
Q Consensus       122 ---------~d-------~~~~~~~-------~~~~~~d~vv~~ag~~~--~~~~----~~~~~~---------~~~l~~  163 (296)
                               +|       ..+++.+       .+++ +|+||||||+..  ....    ...+..         .+++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~-iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGN-IDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCS-EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCC-CCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                     22       0122333       2345 999999999642  1111    111111         444444


Q ss_pred             HHHc--CCCEEEEEccceeccCccCccCChhhhhhhhh-HHHHHHHHHHHHHHH-------H-hCCcEEEEecCcccCCC
Q 022495          164 CRKR--GVNRFILISSILVNGAAMGQILNPAYIFLNVF-GLTLIAKLQAEQYIR-------K-SGINYTIIRPGGLRNEP  232 (296)
Q Consensus       164 ~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~-~~y~~sK~~~e~~~~-------~-~~~~~~~lrp~~i~g~~  232 (296)
                      +...  ..++||++||...+....            .+ ..|+.+|++.+.+.+       . .|++++.|+||.+.++.
T Consensus       164 ~~~~m~~~g~Iv~isS~~~~~~~~------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  231 (315)
T 2o2s_A          164 FGPIMNEGGSAVTLSYLAAERVVP------------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRA  231 (315)
T ss_dssp             HSTTEEEEEEEEEEEEGGGTSCCT------------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHH
T ss_pred             HHHHHhcCCEEEEEecccccccCC------------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchh
Confidence            4332  126999999987543211            12 359999999987653       2 68999999999998753


Q ss_pred             CCCce-----ee-cc------cCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          233 PTGNI-----IM-ET------EDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       233 ~~~~~-----~~-~~------~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      .....     .. ..      .......+..++|+|++++.++....  ..|+.+.+.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  290 (315)
T 2o2s_A          232 ASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDN  290 (315)
T ss_dssp             HHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECC
Confidence            11000     00 00      00011236789999999998886422  3455555543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.73  E-value=3.6e-17  Score=145.36  Aligned_cols=187  Identities=13%  Similarity=0.046  Sum_probs=123.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHH-CCCeEEEEEcCcchhh---------------hcccCCCCCeEEEEcccCCChHHH
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLA-KGFAVKAGVRDLDKAK---------------TTLSKDNPSLQIVKADVTEGSAKL  128 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~---------------~~~~~~~~~~~~~~~D~~d~~~~~  128 (296)
                      .+|++|||||+++||+++++.|++ +|++|++++|+.+...               +........+..+.+|++| .+.+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd-~~~v  138 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFS-DAAR  138 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS-HHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCC-HHHH
Confidence            479999999999999999999999 9999999999865432               1122234578899999999 6655


Q ss_pred             HHH-------h-cCCCCEEEEcCCCC-------------CCCCC-------------------------cchhHH-----
Q 022495          129 SEA-------I-GDDSEAVVCATGFQ-------------PGWDL-------------------------FAPWKA-----  157 (296)
Q Consensus       129 ~~~-------~-~~~~d~vv~~ag~~-------------~~~~~-------------------------~~~~~~-----  157 (296)
                      .++       + ++ +|+||||||..             .....                         .+.+..     
T Consensus       139 ~~~v~~i~~~~~G~-IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          139 AQVIELIKTEMGGQ-VDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHSCSC-EEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC-CCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            543       4 44 99999999862             00000                         011111     


Q ss_pred             -----HHHHHHHHHcC----CCEEEEEccceeccCccCccCChhhhhhhhh--HHHHHHHHHHHHHHH-------HhCCc
Q 022495          158 -----INLVEACRKRG----VNRFILISSILVNGAAMGQILNPAYIFLNVF--GLTLIAKLQAEQYIR-------KSGIN  219 (296)
Q Consensus       158 -----~~~l~~~~~~~----~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~--~~y~~sK~~~e~~~~-------~~~~~  219 (296)
                           ..+++++....    -++||++||+....            +...+  ..|+++|++++.+.+       ..|++
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~------------~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIR  285 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEI------------TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGG  285 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG------------GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc------------cCCCccchHHHHHHHHHHHHHHHHHHHhCccCEE
Confidence                 13445544332    25899999986321            12234  789999999998764       36999


Q ss_pred             EEEEecCcccCCCCCCceeecc----cCccccCCcCHHHHHHHHHHHhcC
Q 022495          220 YTIIRPGGLRNEPPTGNIIMET----EDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       220 ~~~lrp~~i~g~~~~~~~~~~~----~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      +++|.||.+.++........+.    ........-..+|+|+++..++.+
T Consensus       286 VNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd  335 (422)
T 3s8m_A          286 ANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRE  335 (422)
T ss_dssp             EEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             EEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcc
Confidence            9999999999875332111000    000112244568999998887754

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.70  E-value=2.3e-16  Score=139.05  Aligned_cols=188  Identities=10%  Similarity=0.009  Sum_probs=122.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHH-CCCeEEEEEcCcchhh---------------hcccCCCCCeEEEEcccCCChHHH
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLA-KGFAVKAGVRDLDKAK---------------TTLSKDNPSLQIVKADVTEGSAKL  128 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~---------------~~~~~~~~~~~~~~~D~~d~~~~~  128 (296)
                      .+|++|||||+++||+++++.|++ +|++|++++|+.+...               +........+..+.+|++| .+.+
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd-~~~v  124 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS-DEIK  124 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS-HHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC-HHHH
Confidence            479999999999999999999999 9999999988754321               1122234578899999999 7766


Q ss_pred             HHHhcC------CCCEEEEcCCCCC-------------CC-----------------------CCc--chhHH-------
Q 022495          129 SEAIGD------DSEAVVCATGFQP-------------GW-----------------------DLF--APWKA-------  157 (296)
Q Consensus       129 ~~~~~~------~~d~vv~~ag~~~-------------~~-----------------------~~~--~~~~~-------  157 (296)
                      .++++.      ++|++|||||...             ..                       ...  +.+..       
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            655432      4999999999741             00                       101  11111       


Q ss_pred             --H-HHHHHHHHcC----CCEEEEEccceeccCccCccCChhhhhhhhh--HHHHHHHHHHHHHHH-------Hh-CCcE
Q 022495          158 --I-NLVEACRKRG----VNRFILISSILVNGAAMGQILNPAYIFLNVF--GLTLIAKLQAEQYIR-------KS-GINY  220 (296)
Q Consensus       158 --~-~~l~~~~~~~----~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~--~~y~~sK~~~e~~~~-------~~-~~~~  220 (296)
                        . .+++++....    -++||++||+.....            ...+  ..|+++|.+++.+.+       .. |+++
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~------------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRV  272 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT------------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDA  272 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEE
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc------------CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEE
Confidence              1 3445443322    258999999864321            1123  679999999997764       36 9999


Q ss_pred             EEEecCcccCCCCCCceeec----ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          221 TIIRPGGLRNEPPTGNIIME----TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       221 ~~lrp~~i~g~~~~~~~~~~----~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ++|.||.+.++........+    ........+-..+|+++++..++.+
T Consensus       273 NaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          273 RVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             EEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             EEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence            99999999886422110000    0000112244568889988887754

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.67  E-value=1.6e-16  Score=161.74  Aligned_cols=219  Identities=16%  Similarity=0.087  Sum_probs=136.4

Q ss_pred             hhccCCCCeEEEEcCCch-HHHHHHHHHHHCCCeEEEE-EcCcchhhhc-------ccCCCCCeEEEEcccCCChHHHHH
Q 022495           60 ENVSVKQKKIFVAGATGS-SGKRIVEQLLAKGFAVKAG-VRDLDKAKTT-------LSKDNPSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        60 ~~~~~~~~~ilVtGa~G~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~-------~~~~~~~~~~~~~D~~d~~~~~~~  130 (296)
                      ..+++++|++|||||+|+ ||+++++.|+++|++|+++ .|+.++..+.       ......++.++.+|++| .+++.+
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd-~~sV~a  747 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGS-KQDVEA  747 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTC-HHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCC-HHHHHH
Confidence            334678999999999998 9999999999999999998 4666544321       11124568999999999 777776


Q ss_pred             Hhc-----------C-CCCEEEEcCCCCCCC-CCc--c----hhHH---------HHHHHHHHHc------CCCEEEEEc
Q 022495          131 AIG-----------D-DSEAVVCATGFQPGW-DLF--A----PWKA---------INLVEACRKR------GVNRFILIS  176 (296)
Q Consensus       131 ~~~-----------~-~~d~vv~~ag~~~~~-~~~--~----~~~~---------~~~l~~~~~~------~~~~iV~~S  176 (296)
                      +++           + ++|+||||||+.... ...  .    .+..         ..++++++..      +.++||++|
T Consensus       748 lv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnIS  827 (1887)
T 2uv8_A          748 LIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  827 (1887)
T ss_dssp             HHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEC
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEc
Confidence            552           1 399999999975433 111  1    1111         3444544322      226999999


Q ss_pred             cceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH-HH----Hh--CCcEEEEecCccc-CCCCCC-ceeecccCcccc
Q 022495          177 SILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY-IR----KS--GINYTIIRPGGLR-NEPPTG-NIIMETEDTLYE  247 (296)
Q Consensus       177 S~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~----~~--~~~~~~lrp~~i~-g~~~~~-~~~~~~~~~~~~  247 (296)
                      |...+..              ....|+.+|++++.+ .+    +.  .++++.|.||++. ++.... ............
T Consensus       828 S~ag~~g--------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~pl  893 (1887)
T 2uv8_A          828 PNHGTFG--------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGV  893 (1887)
T ss_dssp             SCTTCSS--------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHTTSC
T ss_pred             ChHhccC--------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHhcCC
Confidence            9864322              134699999999987 32    11  2999999999998 443221 000000001111


Q ss_pred             CCcCHHHHHHHHHHHhcCC-C--CCCCeEEEE-eCCCCCCCCHHHHHHHh
Q 022495          248 GTISRDQVAEVAVEALLHP-E--SSYKVVEII-SRVDAPKRSYEDLFGSI  293 (296)
Q Consensus       248 ~~i~~~Dva~~i~~~l~~~-~--~~~~~~~i~-~~~~~~~~~~~el~~~i  293 (296)
                      .+.+++|+|++++.++... .  ..+..+.+. +.+......+.++...+
T Consensus       894 r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~l  943 (1887)
T 2uv8_A          894 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKL  943 (1887)
T ss_dssp             CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHH
Confidence            3568999999988777653 1  134566653 22222334566665443

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.67  E-value=1.7e-16  Score=161.27  Aligned_cols=219  Identities=14%  Similarity=0.090  Sum_probs=138.3

Q ss_pred             hhccCCCCeEEEEcCCch-HHHHHHHHHHHCCCeEEEEE-cCcchhhh----c---ccCCCCCeEEEEcccCCChHHHHH
Q 022495           60 ENVSVKQKKIFVAGATGS-SGKRIVEQLLAKGFAVKAGV-RDLDKAKT----T---LSKDNPSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        60 ~~~~~~~~~ilVtGa~G~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----~---~~~~~~~~~~~~~D~~d~~~~~~~  130 (296)
                      ..+++++|++|||||+|+ ||.++++.|+++|++|++++ |+.+...+    +   +...+.++.++.+|++| .+.+.+
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd-~esV~a  724 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGS-KQDVEA  724 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTC-HHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCC-HHHHHH
Confidence            345678999999999999 99999999999999999985 55544321    1   11124568999999999 887776


Q ss_pred             Hhc---------C-CCCEEEEcCCCCCCC-C--Ccc----hhHH---------HHHHHHH------HHcCCCEEEEEccc
Q 022495          131 AIG---------D-DSEAVVCATGFQPGW-D--LFA----PWKA---------INLVEAC------RKRGVNRFILISSI  178 (296)
Q Consensus       131 ~~~---------~-~~d~vv~~ag~~~~~-~--~~~----~~~~---------~~~l~~~------~~~~~~~iV~~SS~  178 (296)
                      ++.         + ++|+||||||+.... .  ...    .+..         .++++.+      ++.+.++||++||.
T Consensus       725 lv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~  804 (1878)
T 2uv9_A          725 LVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPN  804 (1878)
T ss_dssp             HHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSC
T ss_pred             HHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcch
Confidence            653         1 399999999975432 1  111    1111         2333332      12233699999998


Q ss_pred             eeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCccc-CCCCCCc-eeecccCccccCC
Q 022495          179 LVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLR-NEPPTGN-IIMETEDTLYEGT  249 (296)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~-g~~~~~~-~~~~~~~~~~~~~  249 (296)
                      ..+...              ...|+.+|++++.+.+.       ..++++.|.||++. ++..... .............
T Consensus       805 ag~~gg--------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~  870 (1878)
T 2uv9_A          805 HGTFGN--------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRT  870 (1878)
T ss_dssp             SSSSSC--------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCC
T ss_pred             hhccCC--------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHhcCCCC
Confidence            653221              24599999999887531       13899999999998 6543221 0000000111135


Q ss_pred             cCHHHHHHHHHHHhcCCC---CCCCeEEEE-eCCCCCCCCHHHHHHHh
Q 022495          250 ISRDQVAEVAVEALLHPE---SSYKVVEII-SRVDAPKRSYEDLFGSI  293 (296)
Q Consensus       250 i~~~Dva~~i~~~l~~~~---~~~~~~~i~-~~~~~~~~~~~el~~~i  293 (296)
                      .+++|+|++++.++....   ..+..+.+. +.+......+.++...+
T Consensus       871 ~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          871 FSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             BCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence            689999999888775432   235666663 22112335666665544

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.67  E-value=4.8e-17  Score=160.90  Aligned_cols=190  Identities=18%  Similarity=0.155  Sum_probs=124.3

Q ss_pred             ccCCCCeEEEEcCCch-HHHHHHHHHHHCCCeEEEE-EcCcchhhhc---c-cC---CCCCeEEEEcccCCChHHHHHHh
Q 022495           62 VSVKQKKIFVAGATGS-SGKRIVEQLLAKGFAVKAG-VRDLDKAKTT---L-SK---DNPSLQIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~---~-~~---~~~~~~~~~~D~~d~~~~~~~~~  132 (296)
                      +++++|++|||||+|+ ||+++|+.|+++|++|+++ .|+.+...+.   + ..   ...++.++.+|++| .+++.+++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD-~esVeaLV  550 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGS-KQDVEALI  550 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSS-TTHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCC-HHHHHHHH
Confidence            4567899999999998 9999999999999999998 4665443321   1 11   13468899999999 77776654


Q ss_pred             c-----------C-CCCEEEEcCCCCCCC-C--Ccc----hhHH---------HHHHHHHH------HcCCCEEEEEccc
Q 022495          133 G-----------D-DSEAVVCATGFQPGW-D--LFA----PWKA---------INLVEACR------KRGVNRFILISSI  178 (296)
Q Consensus       133 ~-----------~-~~d~vv~~ag~~~~~-~--~~~----~~~~---------~~~l~~~~------~~~~~~iV~~SS~  178 (296)
                      +           + ++|+||||||+.... .  ...    .+..         ..++++++      +.+.++||++||.
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi  630 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  630 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence            2           1 399999999975432 1  111    1111         33444442      2223689999998


Q ss_pred             eeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccC-CCCCC-ceeecccCccccCC
Q 022495          179 LVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-------SGINYTIIRPGGLRN-EPPTG-NIIMETEDTLYEGT  249 (296)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~~lrp~~i~g-~~~~~-~~~~~~~~~~~~~~  249 (296)
                      ..+..              ....|+++|++++.+..+       ..++++.|.||++.+ +.... ..............
T Consensus       631 AG~~G--------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~  696 (1688)
T 2pff_A          631 HGTFG--------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRT  696 (1688)
T ss_dssp             TTTSS--------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCC
T ss_pred             HhccC--------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHHHHHhCCCCC
Confidence            64321              134699999999998321       138999999999984 43221 11000011111135


Q ss_pred             cCHHHHHHHHHHHhcCC
Q 022495          250 ISRDQVAEVAVEALLHP  266 (296)
Q Consensus       250 i~~~Dva~~i~~~l~~~  266 (296)
                      .+++|+|++++.++...
T Consensus       697 ~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          697 FSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             CCCCTTHHHHHHHTSTT
T ss_pred             CCHHHHHHHHHHHhCCC
Confidence            68899999998888654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.65  E-value=1.6e-15  Score=135.79  Aligned_cols=189  Identities=12%  Similarity=-0.018  Sum_probs=122.7

Q ss_pred             CCCCeEEEEcCCchHHHH--HHHHHHHCCCeEEEEEcCcchh---------------hhcccCCCCCeEEEEcccCCChH
Q 022495           64 VKQKKIFVAGATGSSGKR--IVEQLLAKGFAVKAGVRDLDKA---------------KTTLSKDNPSLQIVKADVTEGSA  126 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~--l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~~D~~d~~~  126 (296)
                      ..+|++|||||+++||++  +++.|+++|++|++++|+....               .+........+.++.+|++| .+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd-~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS-NE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC-HH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC-HH
Confidence            468999999999999999  9999999999999999875431               11112234578899999999 77


Q ss_pred             HHHHHhcC------CCCEEEEcCCCCC-------------CCC-----------------------CcchhHH-------
Q 022495          127 KLSEAIGD------DSEAVVCATGFQP-------------GWD-----------------------LFAPWKA-------  157 (296)
Q Consensus       127 ~~~~~~~~------~~d~vv~~ag~~~-------------~~~-----------------------~~~~~~~-------  157 (296)
                      ++.++++.      ++|++|||||...             ...                       .......       
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            76665532      5999999999730             000                       0011111       


Q ss_pred             -----HHHHHHHHHcC----CCEEEEEccceeccCccCccCChhhhhhhhh--HHHHHHHHHHHHHHH-------H-hCC
Q 022495          158 -----INLVEACRKRG----VNRFILISSILVNGAAMGQILNPAYIFLNVF--GLTLIAKLQAEQYIR-------K-SGI  218 (296)
Q Consensus       158 -----~~~l~~~~~~~----~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~--~~y~~sK~~~e~~~~-------~-~~~  218 (296)
                           ..+++++....    -+++|++||++....            ...+  +.|+++|++++.+.+       . .|+
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~------------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GI  284 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT------------YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGG  284 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC------------CCccccHHHHHHHHHHHHHHHHHHHHhCCccCe
Confidence                 13445544332    258999999853211            1224  679999999987653       5 799


Q ss_pred             cEEEEecCcccCCCCCCceeec----ccCccccCCcCHHHHHHHHHHHhcC
Q 022495          219 NYTIIRPGGLRNEPPTGNIIME----TEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       219 ~~~~lrp~~i~g~~~~~~~~~~----~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ++++|.||.+.++........+    .........-..+|+++++..++.+
T Consensus       285 rVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd  335 (418)
T 4eue_A          285 RAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSE  335 (418)
T ss_dssp             EEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             EEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhc
Confidence            9999999999886422110000    0000111234567888888887764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.62  E-value=3.1e-15  Score=144.75  Aligned_cols=188  Identities=17%  Similarity=0.116  Sum_probs=129.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHH-HCCC-eEEEEEcCcch---hhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLL-AKGF-AVKAGVRDLDK---AKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~-~~g~-~V~~~~r~~~~---~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      .++++|||||+|+||+++++.|+ ++|+ +|++++|+...   ..+.   +...+.++.++.+|++| .+++.++++.  
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd-~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVAD-RETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHH
Confidence            47899999999999999999999 7898 59999998432   2221   12245679999999999 8999888765  


Q ss_pred             ---CCCEEEEcCCCCCCCCCcc----hhHH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          135 ---DSEAVVCATGFQPGWDLFA----PWKA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~~----~~~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                         ++|+||||||+........    .+..         .++.+++ .... +||++||+..+-...            .
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~-~~~l-~iV~~SS~ag~~g~~------------g  673 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI-DPDV-ALVLFSSVSGVLGSG------------G  673 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS-CTTS-EEEEEEETHHHHTCS------------S
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH-hhCC-EEEEEccHHhcCCCC------------C
Confidence               4899999999865432211    1111         6666665 2234 899999987543222            2


Q ss_pred             hHHHHHHHHHHHHHHH---HhCCcEEEEecCcccCCCCCCcee---ecccCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          199 FGLTLIAKLQAEQYIR---KSGINYTIIRPGGLRNEPPTGNII---METEDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~---~~~~~~~~lrp~~i~g~~~~~~~~---~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ...|+++|...+.+.+   ..|++++.|.||.+.+........   ...........+..++....+..++..+.
T Consensus       674 ~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          674 QGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            4679999988887654   579999999999887653111100   00001112346888999888888887654

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.60  E-value=2e-16  Score=138.39  Aligned_cols=159  Identities=13%  Similarity=0.128  Sum_probs=107.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcCcc--hhhh---cccCCCCCeEEEEcccCCChHHHHHHhc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLD--KAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      .|+|+||||+||||++++..|+++|+       +|+++++.+.  +...   .+.  +..+.++ +|+.+ .+.+.++++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~--~~~~~~~-~di~~-~~~~~~a~~   79 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELE--DCAFPLL-AGLEA-TDDPKVAFK   79 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH--TTTCTTE-EEEEE-ESCHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhh--ccccccc-CCeEe-ccChHHHhC
Confidence            46899999999999999999999986       8999888641  1111   111  1122333 68877 667888899


Q ss_pred             CCCCEEEEcCCCCCCCCCc--chh--HH---HHHHHHHHHcC-CC-EEEEEcccee-ccCccCccCChhhh-hhhhhHHH
Q 022495          134 DDSEAVVCATGFQPGWDLF--APW--KA---INLVEACRKRG-VN-RFILISSILV-NGAAMGQILNPAYI-FLNVFGLT  202 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~~--~~~--~~---~~~l~~~~~~~-~~-~iV~~SS~~~-~~~~~~~~~~~~~~-~~~~~~~y  202 (296)
                      + +|+|||+||........  ...  +.   +++++++++.+ .+ ++|++|+... ..     +...... ..++...|
T Consensus        80 ~-~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p~~~y  153 (327)
T 1y7t_A           80 D-ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNPRNFT  153 (327)
T ss_dssp             T-CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCGGGEE
T ss_pred             C-CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCChhhee
Confidence            8 99999999976432211  111  11   89999999985 54 7887776431 00     0000111 12344568


Q ss_pred             HHHHHHHHHHH----HHhCCcEEEEecCcccCCCCC
Q 022495          203 LIAKLQAEQYI----RKSGINYTIIRPGGLRNEPPT  234 (296)
Q Consensus       203 ~~sK~~~e~~~----~~~~~~~~~lrp~~i~g~~~~  234 (296)
                      +.+|...|++.    +..|++++++||+++||+...
T Consensus       154 g~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          154 AMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             ECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             ccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            89999988765    356999999999999997543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.44  E-value=9.3e-13  Score=140.43  Aligned_cols=219  Identities=16%  Similarity=0.123  Sum_probs=130.4

Q ss_pred             ccCCCCeEEEEcCCch-HHHHHHHHHHHCCCeEEEEEcCcch-----hhhc---ccCCCCCeEEEEcccCCChHHHHHHh
Q 022495           62 VSVKQKKIFVAGATGS-SGKRIVEQLLAKGFAVKAGVRDLDK-----AKTT---LSKDNPSLQIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~  132 (296)
                      ..+++|++|||||+++ ||+++|+.|+++|++|++.+|+.+.     ..+.   +......+..+.+|++| .+++.+++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd-~~~v~~lv 2210 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMAS-YSDIDKLV 2210 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTC-HHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCC-HHHHHHHH
Confidence            3478999999999999 9999999999999999999998765     3322   22234567889999999 77776653


Q ss_pred             ----c------CCCCEEEEcCCC----CC------CCC--Cc-ch----hHH---------HHHHHHHHHcCCC---EEE
Q 022495          133 ----G------DDSEAVVCATGF----QP------GWD--LF-AP----WKA---------INLVEACRKRGVN---RFI  173 (296)
Q Consensus       133 ----~------~~~d~vv~~ag~----~~------~~~--~~-~~----~~~---------~~~l~~~~~~~~~---~iV  173 (296)
                          +      +++|++|||||+    ..      ...  .. ..    ...         +.+++.+++.+.+   .+|
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence                2      149999999997    11      000  01 01    011         5555666665532   222


Q ss_pred             EEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH----H----hCCcEEEEecCcccC-CCCCC-ceeecccC
Q 022495          174 LISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR----K----SGINYTIIRPGGLRN-EPPTG-NIIMETED  243 (296)
Q Consensus       174 ~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~----~~~~~~~lrp~~i~g-~~~~~-~~~~~~~~  243 (296)
                      ...|.. .+..            .....|+++|++++.+.+    +    .+++++.+.||++.+ +.... ........
T Consensus      2291 ~~~ss~-~g~~------------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~~ 2357 (3089)
T 3zen_D         2291 LPGSPN-RGMF------------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAVE 2357 (3089)
T ss_dssp             EEECSS-TTSC------------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHHG
T ss_pred             EECCcc-cccC------------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHHH
Confidence            222211 1100            012359999999987764    2    258899999999973 32111 10000001


Q ss_pred             ccccCCcCHHHHHHHHHHHhcCCCC---CCCeEEEE--eCCCCCCCCHHHHHHHhh
Q 022495          244 TLYEGTISRDQVAEVAVEALLHPES---SYKVVEII--SRVDAPKRSYEDLFGSIK  294 (296)
Q Consensus       244 ~~~~~~i~~~Dva~~i~~~l~~~~~---~~~~~~i~--~~~~~~~~~~~el~~~i~  294 (296)
                      ........++|+|.+++.++.....   .+....+.  +.-.....++.++...++
T Consensus      2358 ~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2358 EAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             GGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             hcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence            1112344899999998876653211   12223332  311111468888877653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.44  E-value=8.2e-13  Score=97.45  Aligned_cols=97  Identities=25%  Similarity=0.331  Sum_probs=80.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      ++++|+|+|+ |++|+.+++.|.++| ++|++++|++++.....   ..++.++.+|+.| .+.+.+.+.+ +|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~-~~~~~~~~~~-~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---RMGVATKQVDAKD-EAGLAKALGG-FDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---TTTCEEEECCTTC-HHHHHHHTTT-CSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---hCCCcEEEecCCC-HHHHHHHHcC-CCEEEECC
Confidence            3679999999 999999999999999 99999999988776544   3578889999999 8999999998 99999999


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILIS  176 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~S  176 (296)
                      +..         ...++++++.+.|+++|.+.+
T Consensus        78 ~~~---------~~~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           78 PFF---------LTPIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             CGG---------GHHHHHHHHHHTTCEEECCCS
T ss_pred             Cch---------hhHHHHHHHHHhCCCEEEecC
Confidence            632         126788999999986555443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.33  E-value=5e-12  Score=134.82  Aligned_cols=152  Identities=13%  Similarity=0.107  Sum_probs=104.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcchhh---hc---ccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAK---TT---LSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~---~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+|+++||||+|+||+++++.|+++|++ |++++|+..+..   +.   +...+.++.++.+|++| .+++.++++.   
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd-~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASS-LDGARSLITEATQ 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCC-HHHHHHHHHHHHh
Confidence            5789999999999999999999999987 777888864321   11   11134568889999999 7777665532   


Q ss_pred             --CCCEEEEcCCCCCCCC----------CcchhHH---HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          135 --DSEAVVCATGFQPGWD----------LFAPWKA---INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~----------~~~~~~~---~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                        ++|+||||||+.....          .....+.   .++.+++...  ..++||++||+......            .
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~------------~ 2029 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN------------A 2029 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC------------T
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC------------C
Confidence              4999999999743211          1111111   4444444332  24699999998754322            1


Q ss_pred             hhHHHHHHHHHHHHHHH---HhCCcEEEEecCccc
Q 022495          198 VFGLTLIAKLQAEQYIR---KSGINYTIIRPGGLR  229 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~---~~~~~~~~lrp~~i~  229 (296)
                      ....|+++|++.+.+.+   ..|++...+..|.+-
T Consensus      2030 g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2030 GQANYGFANSAMERICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcC
Confidence            24679999999998775   568888888877553

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.17  E-value=2.6e-11  Score=103.93  Aligned_cols=83  Identities=29%  Similarity=0.318  Sum_probs=68.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      .++++|+++||||+|++|+++++.|+++|++|++++|+.++..+....  ...++.++.+|++| .+.+.+++++ +|+|
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~-~Dvl  192 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-DASRAEAVKG-AHFV  192 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-HHHHHHHTTT-CSEE
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC-HHHHHHHHHh-CCEE
Confidence            457789999999999999999999999999999999997765543211  00246778899999 8999999998 9999


Q ss_pred             EEcCCCC
Q 022495          140 VCATGFQ  146 (296)
Q Consensus       140 v~~ag~~  146 (296)
                      |||+|..
T Consensus       193 Vn~ag~g  199 (287)
T 1lu9_A          193 FTAGAIG  199 (287)
T ss_dssp             EECCCTT
T ss_pred             EECCCcc
Confidence            9999853

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.14  E-value=8.2e-10  Score=96.61  Aligned_cols=158  Identities=15%  Similarity=0.044  Sum_probs=102.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHH-HCCCeEEEEEcCcchhhh---------------cccCCCCCeEEEEcccCCChHH
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLL-AKGFAVKAGVRDLDKAKT---------------TLSKDNPSLQIVKADVTEGSAK  127 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~---------------~~~~~~~~~~~~~~D~~d~~~~  127 (296)
                      ...|++|||||++++|.+.+..|+ ..|.+|+++.+..+...+               .....+.....+.+|++| .+.
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d-~e~  126 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFS-DEI  126 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTS-HHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCC-HHH
Confidence            357999999999999999999998 679999999886543221               111234678999999999 776


Q ss_pred             HHHHhcC------CCCEEEEcCCCCCCCCC------------------------------------cchhHH--------
Q 022495          128 LSEAIGD------DSEAVVCATGFQPGWDL------------------------------------FAPWKA--------  157 (296)
Q Consensus       128 ~~~~~~~------~~d~vv~~ag~~~~~~~------------------------------------~~~~~~--------  157 (296)
                      +.++++.      ++|+|||+++.....++                                    ....++        
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            6655532      59999999986421100                                    000011        


Q ss_pred             ----HHHHHHHHHcC----CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHH-----hCCcEEEEe
Q 022495          158 ----INLVEACRKRG----VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-----SGINYTIIR  224 (296)
Q Consensus       158 ----~~~l~~~~~~~----~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-----~~~~~~~lr  224 (296)
                          .-++.+....+    -.++|-.|+.+.   ..      .+ |.-..+.++.+|+++|...+.     .+++++++.
T Consensus       207 ~s~~s~w~~al~~a~lla~G~siva~SYiGs---e~------t~-P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v  276 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEEGCITLAYSYIGP---EA------TQ-ALYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSV  276 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCC---GG------GH-HHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             hhHHHHHHHHHHhhhcccCCceEEEEeccCc---ce------ee-cCCCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence                23444444444    247888887631   10      00 100123689999999976642     367889999


Q ss_pred             cCcccCCC
Q 022495          225 PGGLRNEP  232 (296)
Q Consensus       225 p~~i~g~~  232 (296)
                      ++.+.+.-
T Consensus       277 ~~a~vT~A  284 (401)
T 4ggo_A          277 NKGLVTRA  284 (401)
T ss_dssp             CCCCCCTT
T ss_pred             cCccccch
Confidence            99887753

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.12  E-value=7.9e-10  Score=84.13  Aligned_cols=103  Identities=23%  Similarity=0.197  Sum_probs=78.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~  142 (296)
                      +++++|+|+|+ |.+|+.+++.|.+.|++|++++|++++......   ....++.+|.+| .+.+.++ +++ +|+||++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~---~~~~~~~~d~~~-~~~l~~~~~~~-~d~vi~~   77 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATE-ENELLSLGIRN-FEYVIVA   77 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT---TCSEEEECCTTC-HHHHHTTTGGG-CSEEEEC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hCCEEEEeCCCC-HHHHHhcCCCC-CCEEEEC
Confidence            35678999998 999999999999999999999998876654332   345778899999 7878775 677 9999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ++..       ......+++.+++.+.+++|..++..
T Consensus        78 ~~~~-------~~~~~~~~~~~~~~~~~~ii~~~~~~  107 (144)
T 2hmt_A           78 IGAN-------IQASTLTTLLLKELDIPNIWVKAQNY  107 (144)
T ss_dssp             CCSC-------HHHHHHHHHHHHHTTCSEEEEECCSH
T ss_pred             CCCc-------hHHHHHHHHHHHHcCCCeEEEEeCCH
Confidence            8731       11124567778888877887766643

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=99.02  E-value=2.7e-09  Score=81.15  Aligned_cols=98  Identities=19%  Similarity=0.149  Sum_probs=74.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~a  143 (296)
                      ++++|+|+|+ |.+|+.+++.|.++|++|++++++++.......   .++.++.+|.+| .+.+.++ +.+ +|+||.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~---~~~~~~~gd~~~-~~~l~~~~~~~-~d~vi~~~   78 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED---EGFDAVIADPTD-ESFYRSLDLEG-VSAVLITG   78 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEECCTTC-HHHHHHSCCTT-CSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---CCCcEEECCCCC-HHHHHhCCccc-CCEEEEec
Confidence            4678999997 999999999999999999999999887765543   468899999999 8887765 345 99999887


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILIS  176 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~S  176 (296)
                      +.        ......++..+++.+..++|...
T Consensus        79 ~~--------~~~n~~~~~~a~~~~~~~iia~~  103 (141)
T 3llv_A           79 SD--------DEFNLKILKALRSVSDVYAIVRV  103 (141)
T ss_dssp             SC--------HHHHHHHHHHHHHHCCCCEEEEE
T ss_pred             CC--------HHHHHHHHHHHHHhCCceEEEEE
Confidence            61        12224566667776655555433

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.95  E-value=7.9e-09  Score=78.14  Aligned_cols=99  Identities=23%  Similarity=0.263  Sum_probs=73.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      +|+|+|+|+ |.+|..+++.|.+.|++|++++|+++.......  ..++.++.+|..+ .+.+.+. +.+ +|+||++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~--~~~~~~~~~d~~~-~~~l~~~~~~~-~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA--EIDALVINGDCTK-IKTLEDAGIED-ADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HCSSEEEESCTTS-HHHHHHTTTTT-CSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH--hcCcEEEEcCCCC-HHHHHHcCccc-CCEEEEeeC
Confidence            578999987 999999999999999999999998876654431  1256788899998 7777654 566 999999975


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      .        ......+.+.+++.+.+++|..++
T Consensus        79 ~--------~~~~~~~~~~~~~~~~~~ii~~~~  103 (140)
T 1lss_A           79 K--------EEVNLMSSLLAKSYGINKTIARIS  103 (140)
T ss_dssp             C--------HHHHHHHHHHHHHTTCCCEEEECS
T ss_pred             C--------chHHHHHHHHHHHcCCCEEEEEec
Confidence            2        112245666777777777776443

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.94  E-value=4.7e-09  Score=91.29  Aligned_cols=107  Identities=12%  Similarity=0.071  Sum_probs=73.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhh--hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAK--TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .|+|+||||+|++|..++..|+++|  .+|++++++++...  ++.. ......+ .+ +.+ ..++.+++++ +|+|||
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~-~~~~~~v-~~-~~~-t~d~~~al~g-aDvVi~   82 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISH-MDTGAVV-RG-FLG-QQQLEAALTG-MDLIIV   82 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHT-SCSSCEE-EE-EES-HHHHHHHHTT-CSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhc-ccccceE-EE-EeC-CCCHHHHcCC-CCEEEE
Confidence            4789999999999999999999998  78999988765211  1111 1111111 22 333 4567788999 999999


Q ss_pred             cCCCCCCCCC--cch--hHH---HHHHHHHHHcCCCEEEEEcc
Q 022495          142 ATGFQPGWDL--FAP--WKA---INLVEACRKRGVNRFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~--~~~--~~~---~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +||.......  ...  .+.   +++++++.+.+.+.+|+++|
T Consensus        83 ~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           83 PAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             cCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            9997653321  111  111   88999999988777777776

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.94  E-value=7.2e-10  Score=96.62  Aligned_cols=107  Identities=13%  Similarity=0.113  Sum_probs=73.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcC----cchhhh---cccCCCCCeEEEEcccCCChHHHHHH
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRD----LDKAKT---TLSKDNPSLQIVKADVTEGSAKLSEA  131 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~  131 (296)
                      .++|+||||+|++|++++..|+.+|.       +|++++++    .++...   .+. . ....+ ..|+.. ...+.++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~-~-~~~~~-~~~i~~-~~~~~~a   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEID-D-CAFPL-LAGMTA-HADPMTA   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHH-T-TTCTT-EEEEEE-ESSHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHh-h-hcccc-cCcEEE-ecCcHHH
Confidence            46899999999999999999999885       79988887    433321   111 1 10111 246655 4567888


Q ss_pred             hcCCCCEEEEcCCCCCCCCCcch----hHH---HHHHHHHHHcC-CC-EEEEEcc
Q 022495          132 IGDDSEAVVCATGFQPGWDLFAP----WKA---INLVEACRKRG-VN-RFILISS  177 (296)
Q Consensus       132 ~~~~~d~vv~~ag~~~~~~~~~~----~~~---~~~l~~~~~~~-~~-~iV~~SS  177 (296)
                      +++ +|+|||+||..........    .+.   +++++++.+.+ .+ +||++|.
T Consensus        81 l~~-aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           81 FKD-ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             TTT-CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             hCC-CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            999 9999999997654322111    111   88999999884 55 8999887

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.91  E-value=4.2e-09  Score=95.57  Aligned_cols=101  Identities=18%  Similarity=0.276  Sum_probs=77.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ++++|+|+| +|++|+++++.|++.|++|++.+|++++..++.. ...++..+.+|++| .+++.+++.+ +|+||||++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~-~~~~~~~~~~Dv~d-~~~l~~~l~~-~DvVIn~a~   77 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA-GVQHSTPISLDVND-DAALDAEVAK-HDLVISLIP   77 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT-TCTTEEEEECCTTC-HHHHHHHHTT-SSEEEECCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH-hcCCceEEEeecCC-HHHHHHHHcC-CcEEEECCc
Confidence            468999998 7999999999999999999999999877665442 22357888999999 8889999998 999999998


Q ss_pred             CCCCCC----------Cc-----chhHHHHHHHHHHHcCC
Q 022495          145 FQPGWD----------LF-----APWKAINLVEACRKRGV  169 (296)
Q Consensus       145 ~~~~~~----------~~-----~~~~~~~~l~~~~~~~~  169 (296)
                      ......          ..     ......++++++++.|+
T Consensus        78 ~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv  117 (450)
T 1ff9_A           78 YTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGI  117 (450)
T ss_dssp             --CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTC
T ss_pred             cccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCC
Confidence            632110          00     01122788888998886

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.89  E-value=5.5e-08  Score=75.19  Aligned_cols=102  Identities=21%  Similarity=0.097  Sum_probs=76.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCA  142 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~  142 (296)
                      ..+++|+|+|+ |.+|..+++.|.+.|++|++++|++++......  ..++.++.+|..+ .+.+.++ +.+ +|+||.+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~--~~g~~~~~~d~~~-~~~l~~~~~~~-ad~Vi~~   91 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS--EFSGFTVVGDAAE-FETLKECGMEK-ADMVFAF   91 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT--TCCSEEEESCTTS-HHHHHTTTGGG-CSEEEEC
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh--cCCCcEEEecCCC-HHHHHHcCccc-CCEEEEE
Confidence            34689999996 999999999999999999999999887665431  2456788899988 7777765 677 9999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHH-cCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRK-RGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~-~~~~~iV~~SS~  178 (296)
                      .+.        ......+++.++. .+..++|...+.
T Consensus        92 ~~~--------~~~~~~~~~~~~~~~~~~~iv~~~~~  120 (155)
T 2g1u_A           92 TND--------DSTNFFISMNARYMFNVENVIARVYD  120 (155)
T ss_dssp             SSC--------HHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred             eCC--------cHHHHHHHHHHHHHCCCCeEEEEECC
Confidence            863        1222556667776 566677765543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.87  E-value=1.8e-08  Score=77.70  Aligned_cols=100  Identities=16%  Similarity=0.162  Sum_probs=72.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc-chhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-DKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~  142 (296)
                      ..++++|+|+ |.+|+.+++.|.+.|++|+++++++ ++.+........++.++.+|.+| .+.+.++ +.+ +|+||.+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~-~~~l~~a~i~~-ad~vi~~   78 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSND-SSVLKKAGIDR-CRAILAL   78 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS-HHHHHHHTTTT-CSEEEEC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCC-HHHHHHcChhh-CCEEEEe
Confidence            3578999996 9999999999999999999999975 33222211112468999999999 8888876 777 9999988


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHc-CCCEEEEE
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKR-GVNRFILI  175 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~~  175 (296)
                      .+.        ......+...+++. +..++|..
T Consensus        79 ~~~--------d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           79 SDN--------DADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSC--------HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cCC--------hHHHHHHHHHHHHHCCCCEEEEE
Confidence            752        12224555666665 55566653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.86  E-value=9.7e-09  Score=90.87  Aligned_cols=94  Identities=23%  Similarity=0.261  Sum_probs=76.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      +.|||+|.|| |++|+.+++.|.+ .++|.+.+|+..+++...    ..+..+..|+.| .+++.+++++ +|+||++++
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~----~~~~~~~~d~~d-~~~l~~~~~~-~DvVi~~~p   86 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK----EFATPLKVDASN-FDKLVEVMKE-FELVIGALP   86 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT----TTSEEEECCTTC-HHHHHHHHTT-CSEEEECCC
T ss_pred             CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh----ccCCcEEEecCC-HHHHHHHHhC-CCEEEEecC
Confidence            4578999998 9999999998865 589999999988776543    467888999999 9999999999 999999986


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILIS  176 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~S  176 (296)
                      ..         ....++++|.+.|+ ++|=+|
T Consensus        87 ~~---------~~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           87 GF---------LGFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             GG---------GHHHHHHHHHHHTC-EEEECC
T ss_pred             Cc---------ccchHHHHHHhcCc-ceEeee
Confidence            42         11568888988885 777655

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.86  E-value=2.7e-09  Score=95.67  Aligned_cols=98  Identities=18%  Similarity=0.310  Sum_probs=75.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC---CeEEEEEcCcchhhhcccC----CCCCeEEEEcccCCChHHHHHHhcC-CCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGD-DSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~-~~d  137 (296)
                      |++|+|+|| |++|+.+++.|+++|   .+|++.+|+.++..++...    ...++..+.+|++| .+++.+++++ ++|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d-~~~l~~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS-IEELVALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC-HHHHHHHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC-HHHHHHHHHhhCCC
Confidence            368999998 999999999999998   3899999998876643321    12368999999999 8889988875 589


Q ss_pred             EEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEE
Q 022495          138 AVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILI  175 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~  175 (296)
                      +||||++...         ...++++|.+.|+ +++-+
T Consensus        79 vVin~ag~~~---------~~~v~~a~l~~g~-~vvD~  106 (405)
T 4ina_A           79 IVLNIALPYQ---------DLTIMEACLRTGV-PYLDT  106 (405)
T ss_dssp             EEEECSCGGG---------HHHHHHHHHHHTC-CEEES
T ss_pred             EEEECCCccc---------ChHHHHHHHHhCC-CEEEe
Confidence            9999997421         1567788888886 44433

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.82  E-value=1.2e-08  Score=83.39  Aligned_cols=170  Identities=8%  Similarity=0.099  Sum_probs=97.7

Q ss_pred             cCCCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH
Q 022495           63 SVKQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA  126 (296)
Q Consensus        63 ~~~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~  126 (296)
                      ++++|+||||||                +|++|.++|+.|+++|++|++++++.. ..     ...++.  .+|+.+ .+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~~~g~~--~~dv~~-~~   75 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----TPPFVK--RVDVMT-AL   75 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----CCTTEE--EEECCS-HH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----cCCCCe--EEccCc-HH
Confidence            467999999999                799999999999999999999888652 11     112333  468887 55


Q ss_pred             HHHH----HhcCCCCEEEEcCCCCCC------CCCcch---hH----H-----HHHHHHHHHc-CCCEEEEEccceeccC
Q 022495          127 KLSE----AIGDDSEAVVCATGFQPG------WDLFAP---WK----A-----INLVEACRKR-GVNRFILISSILVNGA  183 (296)
Q Consensus       127 ~~~~----~~~~~~d~vv~~ag~~~~------~~~~~~---~~----~-----~~~l~~~~~~-~~~~iV~~SS~~~~~~  183 (296)
                      .+.+    .+++ +|++|||||+...      ......   ..    .     ..++..+.+. ..+++ .++-....  
T Consensus        76 ~~~~~v~~~~~~-~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-~VGFaaEt--  151 (226)
T 1u7z_A           76 EMEAAVNASVQQ-QNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY-VVGFAAET--  151 (226)
T ss_dssp             HHHHHHHHHGGG-CSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE-EEEEEEES--
T ss_pred             HHHHHHHHhcCC-CCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE-EEEcchhh--
Confidence            4433    3556 9999999996421      011111   01    1     5566666554 22333 33322110  


Q ss_pred             ccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEecCc----ccCCCCCCceeecccCccccCCcCHHHHHHHH
Q 022495          184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGG----LRNEPPTGNIIMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp~~----i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                        .    .       ..     +. +..-+++.++++++..+-.    -++.....-.++...........+.+++|+.+
T Consensus       152 --~----~-------l~-----e~-A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~~~~~~~~sK~~vA~~I  212 (226)
T 1u7z_A          152 --N----N-------VE-----EY-ARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLL  212 (226)
T ss_dssp             --S----S-------HH-----HH-HHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEEEEEEEEEHHHHHHHH
T ss_pred             --c----h-------HH-----HH-HHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCCcEecCCCCHHHHHHHH
Confidence              0    0       11     11 2223457899999888754    22222111222222222223456788999988


Q ss_pred             HHHhc
Q 022495          260 VEALL  264 (296)
Q Consensus       260 ~~~l~  264 (296)
                      +..+.
T Consensus       213 ~~~i~  217 (226)
T 1u7z_A          213 LDEIV  217 (226)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87764

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.78  E-value=2.1e-09  Score=93.07  Aligned_cols=104  Identities=16%  Similarity=0.160  Sum_probs=68.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEc--Ccchhhh----cc---cCCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVR--DLDKAKT----TL---SKDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      |||+||||+|++|++++..|+.+|.  +++++++  ++++...    +.   ......+.+...     .+++.+++++ 
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~-----~d~l~~al~g-   74 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE-----SDENLRIIDE-   74 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE-----ETTCGGGGTT-
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeC-----CcchHHHhCC-
Confidence            4899999999999999999998884  5777777  5432221    11   001112222221     1235667888 


Q ss_pred             CCEEEEcCCCCCCCCCcch----hHH---HHHHHHHHHcCCCEEEEEcc
Q 022495          136 SEAVVCATGFQPGWDLFAP----WKA---INLVEACRKRGVNRFILISS  177 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~~~----~~~---~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +|+|||+||..........    .+.   +++++++++.+ +.+|+++|
T Consensus        75 aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence            9999999997654322111    111   89999999998 87888777

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.77  E-value=2.6e-08  Score=79.25  Aligned_cols=141  Identities=13%  Similarity=0.067  Sum_probs=90.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH--hcCCCCEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA--IGDDSEAVV  140 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~~~d~vv  140 (296)
                      +.+++|+|+|+ |.+|..+++.|.+. |++|+++++++++......   .++.++.+|.+| .+.+.++  +.+ +|+||
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~---~g~~~~~gd~~~-~~~l~~~~~~~~-ad~vi  110 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS---EGRNVISGDATD-PDFWERILDTGH-VKLVL  110 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH---TTCCEEECCTTC-HHHHHTBCSCCC-CCEEE
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH---CCCCEEEcCCCC-HHHHHhccCCCC-CCEEE
Confidence            45678999984 99999999999999 9999999999887765442   467788999999 7877776  677 99999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGIN  219 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  219 (296)
                      .+.+.        ......++..+++.+ ..++|.......+..    .........-....+..++..++.+++..+.+
T Consensus       111 ~~~~~--------~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~----~l~~~G~~~vi~p~~~~a~~l~~~~~~~~~~~  178 (183)
T 3c85_A          111 LAMPH--------HQGNQTALEQLQRRNYKGQIAAIAEYPDQLE----GLLESGVDAAFNIYSEAGSGFARHVCKQLEPQ  178 (183)
T ss_dssp             ECCSS--------HHHHHHHHHHHHHTTCCSEEEEEESSHHHHH----HHHHHTCSEEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred             EeCCC--------hHHHHHHHHHHHHHCCCCEEEEEECCHHHHH----HHHHcCCCEEEchHHHHHHHHHHHHHHhcCCc
Confidence            88752        122255667777776 445554322110000    00000000000122345666777777666666


Q ss_pred             EEE
Q 022495          220 YTI  222 (296)
Q Consensus       220 ~~~  222 (296)
                      +++
T Consensus       179 ~~~  181 (183)
T 3c85_A          179 FTS  181 (183)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.76  E-value=1.6e-08  Score=87.01  Aligned_cols=102  Identities=16%  Similarity=0.112  Sum_probs=67.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEc--Ccchhhhc---ccC---CCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVR--DLDKAKTT---LSK---DNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~---~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      |||+||||+|++|..++..|+.+|.  +++++++  ++++++..   +..   ....+.+...   +     .+++++ +
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~---~-----~~a~~~-a   71 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG---G-----YEDTAG-S   71 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC---C-----GGGGTT-C
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeC---C-----HHHhCC-C
Confidence            5899999999999999999998875  5777777  54433210   000   1123333321   2     344778 9


Q ss_pred             CEEEEcCCCCCCCCCcch----hHH---HHHHHHHHHcCCCEEEEEcc
Q 022495          137 EAVVCATGFQPGWDLFAP----WKA---INLVEACRKRGVNRFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~----~~~---~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |+|||+||..........    .+.   +++++++++.+.+.+|+++|
T Consensus        72 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           72 DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            999999997654322111    111   89999999998777777766

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.75  E-value=2.6e-08  Score=81.46  Aligned_cols=74  Identities=26%  Similarity=0.402  Sum_probs=54.4

Q ss_pred             CCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCCh---
Q 022495           65 KQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS---  125 (296)
Q Consensus        65 ~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~---  125 (296)
                      +||+||||||                +|++|.++|+.|+++|++|+++.|+..... .   ...++..+  |+.. .   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~---~~~~~~~~--~v~s-~~em   74 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-E---PHPNLSIR--EITN-TKDL   74 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-C---CCTTEEEE--ECCS-HHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-c---CCCCeEEE--EHhH-HHHH
Confidence            4799999999                999999999999999999999999753211 0   12345554  4444 3   


Q ss_pred             -HHHHHHhcCCCCEEEEcCCCC
Q 022495          126 -AKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus       126 -~~~~~~~~~~~d~vv~~ag~~  146 (296)
                       +.+.+.+++ +|++||||++.
T Consensus        75 ~~~v~~~~~~-~Dili~aAAvs   95 (232)
T 2gk4_A           75 LIEMQERVQD-YQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHHGGG-CSEEEECSBCC
T ss_pred             HHHHHHhcCC-CCEEEEcCccc
Confidence             334455666 99999999964

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.73  E-value=1.6e-08  Score=91.95  Aligned_cols=79  Identities=19%  Similarity=0.376  Sum_probs=65.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++++|+|+|+ |++|+.+++.|++. |++|++.+|++++..++...  .++..+.+|+.| .+++.+++.+ +|+|||
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~--~~~~~~~~D~~d-~~~l~~~l~~-~DvVIn   94 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP--SGSKAISLDVTD-DSALDKVLAD-NDVVIS   94 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG--GTCEEEECCTTC-HHHHHHHHHT-SSEEEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh--cCCcEEEEecCC-HHHHHHHHcC-CCEEEE
Confidence            456789999997 99999999999998 78999999998877655432  357788899999 8889888988 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      |++..
T Consensus        95 ~tp~~   99 (467)
T 2axq_A           95 LIPYT   99 (467)
T ss_dssp             CSCGG
T ss_pred             CCchh
Confidence            99853

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.63  E-value=2.1e-07  Score=76.13  Aligned_cols=96  Identities=17%  Similarity=0.247  Sum_probs=73.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag~  145 (296)
                      |+|+|+|+ |.+|+.+++.|.++|++|++++++++....+..  ..++.++.+|.+| .+.+.++ +.+ +|+||.+.+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~--~~~~~~i~gd~~~-~~~l~~a~i~~-ad~vi~~~~~   75 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK--KLKATIIHGDGSH-KEILRDAEVSK-NDVVVILTPR   75 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--HSSSEEEESCTTS-HHHHHHHTCCT-TCEEEECCSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH--HcCCeEEEcCCCC-HHHHHhcCccc-CCEEEEecCC
Confidence            57999996 999999999999999999999999987765431  1367899999999 8888876 666 9999987652


Q ss_pred             CCCCCCcchhHHHHHHHHHHH-cCCCEEEEE
Q 022495          146 QPGWDLFAPWKAINLVEACRK-RGVNRFILI  175 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~-~~~~~iV~~  175 (296)
                              ......+...+++ .+..++|-.
T Consensus        76 --------d~~n~~~~~~a~~~~~~~~iia~   98 (218)
T 3l4b_C           76 --------DEVNLFIAQLVMKDFGVKRVVSL   98 (218)
T ss_dssp             --------HHHHHHHHHHHHHTSCCCEEEEC
T ss_pred             --------cHHHHHHHHHHHHHcCCCeEEEE
Confidence                    1222445555665 566677653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.53  E-value=1.5e-07  Score=83.22  Aligned_cols=106  Identities=9%  Similarity=0.082  Sum_probs=72.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|+|+|+ |.||+.+++.|...|++|++.+|++++.+.........   +.+|..+ .+.+.+.+.+ +|+||+|
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~-~~~l~~~~~~-~DvVi~~  236 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTAT-EANIKKSVQH-ADLLIGA  236 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECC-HHHHHHHHHH-CSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCC-HHHHHHHHhC-CCEEEEC
Confidence            356899999999 99999999999999999999999987655432101112   4567777 7888888888 9999999


Q ss_pred             CCCCCC-CCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPG-WDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~-~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ++.... ......   +..++.|+..  +.||.+|+..
T Consensus       237 ~g~~~~~~~~li~---~~~l~~mk~g--g~iV~v~~~~  269 (369)
T 2eez_A          237 VLVPGAKAPKLVT---RDMLSLMKEG--AVIVDVAVDQ  269 (369)
T ss_dssp             CC-------CCSC---HHHHTTSCTT--CEEEECC---
T ss_pred             CCCCccccchhHH---HHHHHhhcCC--CEEEEEecCC
Confidence            986431 111111   4556666533  4899998764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.52  E-value=1.1e-06  Score=66.54  Aligned_cols=73  Identities=12%  Similarity=0.150  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      .++|+|.|+ |.+|..+++.|.+.|++|++++++++.......   .++.++.+|.++ .+.+.++ +.+ +|+||.+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---~g~~~i~gd~~~-~~~l~~a~i~~-ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE---RGVRAVLGNAAN-EEIMQLAHLEC-AKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEESCTTS-HHHHHHTTGGG-CSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---cCCCEEECCCCC-HHHHHhcCccc-CCEEEEECC
Confidence            458999996 999999999999999999999999988765543   578899999999 7877764 456 999998865

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.46  E-value=2.5e-07  Score=74.32  Aligned_cols=99  Identities=14%  Similarity=0.067  Sum_probs=67.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH---HHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK---LSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~---~~~~~~~-~~d~vv  140 (296)
                      .+++|+|+||+|+||..+++.+...|++|++++|++++.+.... .  +... ..|..+ .+.   +.+...+ .+|+||
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~--g~~~-~~d~~~-~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-L--GVEY-VGDSRS-VDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-T--CCSE-EEETTC-STHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CCCE-EeeCCc-HHHHHHHHHHhCCCCCeEEE
Confidence            37899999999999999999999999999999998776543322 1  2222 247766 433   3333322 399999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +|+|.         ......++.++..  +++|.+++..
T Consensus       113 ~~~g~---------~~~~~~~~~l~~~--G~~v~~g~~~  140 (198)
T 1pqw_A          113 NSLAG---------EAIQRGVQILAPG--GRFIELGKKD  140 (198)
T ss_dssp             ECCCT---------HHHHHHHHTEEEE--EEEEECSCGG
T ss_pred             ECCch---------HHHHHHHHHhccC--CEEEEEcCCC
Confidence            99872         1124455555544  4899988764

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.38  E-value=1.3e-06  Score=72.18  Aligned_cols=95  Identities=17%  Similarity=0.185  Sum_probs=72.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      .++++|+|+ |.+|+.+++.|.+.|+ |++++++++......    .++.++.+|.+| .+.+.++ +.+ +|.||.+.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~~~~~i~gd~~~-~~~l~~a~i~~-ad~vi~~~~   80 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR----SGANFVHGDPTR-VSDLEKANVRG-ARAVIVDLE   80 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----TTCEEEESCTTC-HHHHHHTTCTT-CSEEEECCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----cCCeEEEcCCCC-HHHHHhcCcch-hcEEEEcCC
Confidence            468999997 9999999999999999 999999887765443    468999999999 8888776 777 999998864


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCC-EEEEEc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~~S  176 (296)
                      .        ......++..+++.+.+ ++|.-.
T Consensus        81 ~--------d~~n~~~~~~a~~~~~~~~iia~~  105 (234)
T 2aef_A           81 S--------DSETIHCILGIRKIDESVRIIAEA  105 (234)
T ss_dssp             C--------HHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred             C--------cHHHHHHHHHHHHHCCCCeEEEEE
Confidence            2        12224555667777654 555443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.37  E-value=1.5e-06  Score=74.80  Aligned_cols=80  Identities=24%  Similarity=0.310  Sum_probs=60.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcC---cchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRD---LDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      .++++++++|+|+ |++|+.++..|.+.|. +|++..|+   .++..++...  ......+...++.+ .+.+.+.+.+ 
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~-~~~l~~~l~~-  226 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED-HEQLRKEIAE-  226 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHHHT-
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch-HHHHHhhhcC-
Confidence            4678999999997 8999999999999998 89999999   6655543211  01123444557777 6778888888 


Q ss_pred             CCEEEEcCC
Q 022495          136 SEAVVCATG  144 (296)
Q Consensus       136 ~d~vv~~ag  144 (296)
                      .|+||++..
T Consensus       227 aDiIINaTp  235 (315)
T 3tnl_A          227 SVIFTNATG  235 (315)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEECcc
Confidence            999999875

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.31  E-value=4.1e-06  Score=72.25  Aligned_cols=105  Identities=16%  Similarity=0.147  Sum_probs=67.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhh--hcccCCCC-CeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAK--TTLSKDNP-SLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      |||.|+||+|++|..++..|++.|  .+|+++++++....  ++...... .+..+.+     ..+..+++++ +|+||+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~-----t~d~~~a~~~-aDvVvi   74 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG-----PEQLPDCLKG-CDVVVI   74 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES-----GGGHHHHHTT-CSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecC-----CCCHHHHhCC-CCEEEE
Confidence            489999999999999999999888  78999999872211  11110101 1111110     1346677888 999999


Q ss_pred             cCCCCCCCCCc--ch--hHH---HHHHHHHHHcCC-CEEEEEcc
Q 022495          142 ATGFQPGWDLF--AP--WKA---INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~~--~~--~~~---~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      ++|........  +.  .+.   +.+++.+.+... .+||++|.
T Consensus        75 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            99976543221  11  111   778887777653 37777654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.30  E-value=2.4e-07  Score=80.48  Aligned_cols=105  Identities=13%  Similarity=0.041  Sum_probs=67.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--e-----EEEEEcCcc--hhh----hcccCCCCCeEEEEcccCCChHHHHHHhc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--A-----VKAGVRDLD--KAK----TTLSKDNPSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      ++|+||||+|+||++++..|+..|.  +     ++++++++.  .+.    ++.....+-..    ++.. .....+.++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~-~~~~~~~~~   78 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIA-TDKEEIAFK   78 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEE-ESCHHHHTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEE-cCCcHHHhC
Confidence            6899999999999999999998774  4     888888642  221    11110112121    2222 223566788


Q ss_pred             CCCCEEEEcCCCCCCCC--Ccc--hhHH---HHHHHHHHHcCCC--EEEEEcc
Q 022495          134 DDSEAVVCATGFQPGWD--LFA--PWKA---INLVEACRKRGVN--RFILISS  177 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~--~~~--~~~~---~~~l~~~~~~~~~--~iV~~SS  177 (296)
                      + +|+||++||......  ..+  ..+.   +++++++++.+.+  +++.+|.
T Consensus        79 d-aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 D-LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             T-CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             C-CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            8 999999999754321  111  1222   8999999988754  5777765

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.21  E-value=7.2e-06  Score=73.42  Aligned_cols=95  Identities=21%  Similarity=0.255  Sum_probs=73.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      +++|+|+|. |-+|+.+++.|.++|++|++++++++.......   .++.++.+|.++ .+.+.++ +.+ +|+||.+.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~---~g~~vi~GDat~-~~~L~~agi~~-A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK---FGMKVFYGDATR-MDLLESAGAAK-AEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH---TTCCCEESCTTC-HHHHHHTTTTT-CSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh---CCCeEEEcCCCC-HHHHHhcCCCc-cCEEEECCC
Confidence            468999996 999999999999999999999999988765543   468899999999 8888876 666 999998875


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCC-EEEE
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVN-RFIL  174 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~  174 (296)
                      -        ......++..+++.+.. ++|-
T Consensus        78 ~--------~~~n~~i~~~ar~~~p~~~Iia  100 (413)
T 3l9w_A           78 D--------PQTNLQLTEMVKEHFPHLQIIA  100 (413)
T ss_dssp             S--------HHHHHHHHHHHHHHCTTCEEEE
T ss_pred             C--------hHHHHHHHHHHHHhCCCCeEEE
Confidence            2        22225566666666543 4443

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.19  E-value=1.3e-06  Score=73.82  Aligned_cols=77  Identities=17%  Similarity=0.173  Sum_probs=53.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++++++++|+|+ |++|+.++..|++.|++|++.+|++++..++.........   .+..+ .+.+.+  .+ +|+||+
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~---~~~~~-~~~~~~--~~-~DivVn  186 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGS---IQALS-MDELEG--HE-FDLIIN  186 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSS---EEECC-SGGGTT--CC-CSEEEE
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCC---eeEec-HHHhcc--CC-CCEEEE
Confidence            3567899999998 8999999999999999999999998766543321111001   12333 222322  56 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      |++..
T Consensus       187 ~t~~~  191 (271)
T 1nyt_A          187 ATSSG  191 (271)
T ss_dssp             CCSCG
T ss_pred             CCCCC
Confidence            99854

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.16  E-value=3.8e-06  Score=73.57  Aligned_cols=99  Identities=16%  Similarity=0.107  Sum_probs=65.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHH----HHhcCCCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLS----EAIGDDSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~----~~~~~~~d~vv  140 (296)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+.... .  +... ..|+.+ .+.+.    +...+.+|+||
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~--g~~~-~~d~~~-~~~~~~~~~~~~~~~~D~vi  243 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-I--GGEV-FIDFTK-EKDIVGAVLKATDGGAHGVI  243 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-T--TCCE-EEETTT-CSCHHHHHHHHHTSCEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-c--CCce-EEecCc-cHhHHHHHHHHhCCCCCEEE
Confidence            47899999999999999999999999999999998876643322 1  2222 237764 22233    22221399999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +++|..        ......++.++..  +++|.+++.
T Consensus       244 ~~~g~~--------~~~~~~~~~l~~~--G~iv~~g~~  271 (347)
T 2hcy_A          244 NVSVSE--------AAIEASTRYVRAN--GTTVLVGMP  271 (347)
T ss_dssp             ECSSCH--------HHHHHHTTSEEEE--EEEEECCCC
T ss_pred             ECCCcH--------HHHHHHHHHHhcC--CEEEEEeCC
Confidence            999831        1113344444433  489988764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.16  E-value=3.9e-06  Score=73.01  Aligned_cols=99  Identities=13%  Similarity=0.121  Sum_probs=65.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH----HHHHhcCCCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK----LSEAIGDDSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~----~~~~~~~~~d~vv  140 (296)
                      .+++|+|+||+|+||..+++.+...|++|++++|++++.+.... .  +.. ...|+++ .+.    +.+...+.+|++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~--g~~-~~~d~~~-~~~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-I--GFD-AAFNYKT-VNSLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T--TCS-EEEETTS-CSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-c--CCc-EEEecCC-HHHHHHHHHHHhCCCCeEEE
Confidence            47899999999999999999999999999999998776554321 1  122 2246655 222    3332222399999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +|+|..         .....++.++..  +++|.++...
T Consensus       220 ~~~g~~---------~~~~~~~~l~~~--G~~v~~g~~~  247 (333)
T 1v3u_A          220 DNVGGE---------FLNTVLSQMKDF--GKIAICGAIS  247 (333)
T ss_dssp             ESSCHH---------HHHHHHTTEEEE--EEEEECCCCC
T ss_pred             ECCChH---------HHHHHHHHHhcC--CEEEEEeccc
Confidence            999831         123344444333  4899887754

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.16  E-value=7.2e-07  Score=75.76  Aligned_cols=76  Identities=21%  Similarity=0.314  Sum_probs=55.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccC---CCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK---DNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      ++++++++|+|+ |++|+.++..|.+.|. +|++.+|++++..++...   ....+.+...+..+    +.+.+.+ .|+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~----l~~~l~~-~Di  197 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG----IEDVIAA-ADG  197 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT----HHHHHHH-SSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH----HHHHHhc-CCE
Confidence            577899999997 9999999999999998 799999998876644211   11223333334333    5566677 999


Q ss_pred             EEEcCC
Q 022495          139 VVCATG  144 (296)
Q Consensus       139 vv~~ag  144 (296)
                      ||++..
T Consensus       198 VInaTp  203 (283)
T 3jyo_A          198 VVNATP  203 (283)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            999875

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.13  E-value=1.2e-06  Score=76.38  Aligned_cols=106  Identities=14%  Similarity=0.080  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhh----cccCCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKT----TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +++||.|+|++|++|+.++..|+..|  .+|++++++.++++.    +.....+.     .++.- .....+++++ +|+
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~-----~~i~~-t~d~~~al~d-ADv   79 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEG-----LNLTF-TSDIKEALTD-AKY   79 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTT-----CCCEE-ESCHHHHHTT-EEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCC-----CceEE-cCCHHHHhCC-CCE
Confidence            46899999999999999999999998  489999998765442    11100011     11111 1235566888 999


Q ss_pred             EEEcCCCCCCCCCcch----hHH---HHHHHHHHHcCCCE--EEEEcc
Q 022495          139 VVCATGFQPGWDLFAP----WKA---INLVEACRKRGVNR--FILISS  177 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~----~~~---~~~l~~~~~~~~~~--iV~~SS  177 (296)
                      ||.+||..........    .+.   +.+++.+.+.+.+-  ++.+|.
T Consensus        80 VvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           80 IVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             EEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            9999997543221111    111   77888887776433  555553

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.08  E-value=9.7e-06  Score=69.62  Aligned_cols=81  Identities=20%  Similarity=0.336  Sum_probs=57.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcC---cchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRD---LDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      .++++++++|+|+ |+.|+.++..|.+.|. +|++..|+   .++..++...  ...+......+..+ .+.+.+.+.+ 
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~-l~~~~~~l~~-  220 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD-QHAFTEALAS-  220 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHHHH-
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh-hhhhHhhccC-
Confidence            4567899999997 9999999999999997 89999999   5555443210  01123333445555 4445666777 


Q ss_pred             CCEEEEcCCC
Q 022495          136 SEAVVCATGF  145 (296)
Q Consensus       136 ~d~vv~~ag~  145 (296)
                      .|+||++.+.
T Consensus       221 ~DiIINaTp~  230 (312)
T 3t4e_A          221 ADILTNGTKV  230 (312)
T ss_dssp             CSEEEECSST
T ss_pred             ceEEEECCcC
Confidence            9999998653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.08  E-value=6.2e-06  Score=71.82  Aligned_cols=101  Identities=14%  Similarity=0.137  Sum_probs=67.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH---HHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA---KLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~~~~~d~vv~  141 (296)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+......  ++.. ..|..+ .+   .+.+...+.+|++|+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~--g~~~-~~~~~~-~~~~~~~~~~~~~~~d~vi~  224 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL--GFDG-AIDYKN-EDLAAGLKRECPKGIDVFFD  224 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--CCSE-EEETTT-SCHHHHHHHHCTTCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCCE-EEECCC-HHHHHHHHHhcCCCceEEEE
Confidence            4789999999999999999999999999999999987766541112  2221 235555 33   333332224999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcccee
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILV  180 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~  180 (296)
                      |+|..         .....++.++..  +++|.++....
T Consensus       225 ~~g~~---------~~~~~~~~l~~~--G~iv~~G~~~~  252 (336)
T 4b7c_A          225 NVGGE---------ILDTVLTRIAFK--ARIVLCGAISQ  252 (336)
T ss_dssp             SSCHH---------HHHHHHTTEEEE--EEEEECCCGGG
T ss_pred             CCCcc---------hHHHHHHHHhhC--CEEEEEeeccc
Confidence            99831         123444444443  48998887653

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.07  E-value=3.2e-06  Score=73.94  Aligned_cols=99  Identities=15%  Similarity=0.121  Sum_probs=68.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH---HHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA---KLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~~~-~~d~vv  140 (296)
                      .+++|||+||+|++|..+++.+...|++|+++++++++.+.... .  +... ..|..+ .+   .+.+...+ .+|+||
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~--ga~~-~~d~~~-~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-L--GADE-TVNYTH-PDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H--TCSE-EEETTS-TTHHHHHHHHTTTTCEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-c--CCCE-EEcCCc-ccHHHHHHHHhCCCCceEEE
Confidence            46899999999999999999999999999999998876654321 1  1222 246665 33   34444332 499999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +++| ...        ....++.++..  +++|.+++..
T Consensus       241 ~~~g-~~~--------~~~~~~~l~~~--G~~v~~g~~~  268 (343)
T 2eih_A          241 DHTG-ALY--------FEGVIKATANG--GRIAIAGASS  268 (343)
T ss_dssp             ESSC-SSS--------HHHHHHHEEEE--EEEEESSCCC
T ss_pred             ECCC-HHH--------HHHHHHhhccC--CEEEEEecCC
Confidence            9998 211        14556666554  4899888753

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.07  E-value=4.5e-06  Score=72.40  Aligned_cols=98  Identities=16%  Similarity=0.159  Sum_probs=66.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH---HHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK---LSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~---~~~~~~~-~~d~vv  140 (296)
                      .+++|+|+||+|+||..+++.+...|++|++++|++++.+.... .  +... ..|..+ .+.   +.+...+ .+|++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~--g~~~-~~~~~~-~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A--GAWQ-VINYRE-EDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H--TCSE-EEETTT-SCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CCCE-EEECCC-ccHHHHHHHHhCCCCceEEE
Confidence            47899999999999999999999999999999998776554322 1  1221 246665 333   3333322 499999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +|+|. .        .....++.++..  +++|.+++.
T Consensus       215 ~~~g~-~--------~~~~~~~~l~~~--G~iv~~g~~  241 (327)
T 1qor_A          215 DSVGR-D--------TWERSLDCLQRR--GLMVSFGNS  241 (327)
T ss_dssp             ECSCG-G--------GHHHHHHTEEEE--EEEEECCCT
T ss_pred             ECCch-H--------HHHHHHHHhcCC--CEEEEEecC
Confidence            99981 1        113455555444  489988875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.03  E-value=5.8e-06  Score=71.92  Aligned_cols=98  Identities=16%  Similarity=0.151  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH---HHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA---KLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~~~-~~d~vv  140 (296)
                      .+++|+|+||+|+||..+++.+...|++|++++|++++.+.... .  +... ..|.++ .+   .+.+...+ .+|++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~--g~~~-~~d~~~-~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L--GCHH-TINYST-QDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H--TCSE-EEETTT-SCHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c--CCCE-EEECCC-HHHHHHHHHHhCCCCCeEEE
Confidence            46899999999999999999999999999999999866553321 1  1221 236665 33   34444332 499999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +|+|..         .....++.++..  +++|.++..
T Consensus       220 ~~~g~~---------~~~~~~~~l~~~--G~iv~~g~~  246 (333)
T 1wly_A          220 DSIGKD---------TLQKSLDCLRPR--GMCAAYGHA  246 (333)
T ss_dssp             ECSCTT---------THHHHHHTEEEE--EEEEECCCT
T ss_pred             ECCcHH---------HHHHHHHhhccC--CEEEEEecC
Confidence            999841         113455555444  488888765

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.01  E-value=1.3e-05  Score=70.90  Aligned_cols=105  Identities=16%  Similarity=0.140  Sum_probs=71.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|+|+|+ |.||+.+++.+...|.+|++.+|++++.+.........+   ..+..+ .+.+.+.+.+ +|+||.+
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~---~~~~~~-~~~l~~~l~~-aDvVi~~  238 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI---HTRYSS-AYELEGAVKR-ADLVIGA  238 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS---EEEECC-HHHHHHHHHH-CSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee---EeccCC-HHHHHHHHcC-CCEEEEC
Confidence            356899999998 999999999999999999999999876543321011222   223445 5667777888 9999999


Q ss_pred             CCCCCC-CCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPG-WDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~-~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ++.... ......   ...++.|+..  +.||.+|+.
T Consensus       239 ~~~p~~~t~~li~---~~~l~~mk~g--~~iV~va~~  270 (377)
T 2vhw_A          239 VLVPGAKAPKLVS---NSLVAHMKPG--AVLVDIAID  270 (377)
T ss_dssp             CCCTTSCCCCCBC---HHHHTTSCTT--CEEEEGGGG
T ss_pred             CCcCCCCCcceec---HHHHhcCCCC--cEEEEEecC
Confidence            875442 111111   4455555543  478888853

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.01  E-value=9.9e-06  Score=71.14  Aligned_cols=100  Identities=16%  Similarity=0.123  Sum_probs=66.6

Q ss_pred             CC--CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH---HHHHHhcCCCCE
Q 022495           65 KQ--KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA---KLSEAIGDDSEA  138 (296)
Q Consensus        65 ~~--~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~~~~~d~  138 (296)
                      .+  ++|+|+||+|+||..+++.+...|+ +|+++++++++........  +.. ...|..+ .+   .+.+...+.+|+
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~--g~~-~~~d~~~-~~~~~~~~~~~~~~~d~  233 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL--GFD-AAINYKK-DNVAEQLRESCPAGVDV  233 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS--CCS-EEEETTT-SCHHHHHHHHCTTCEEE
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc--CCc-eEEecCc-hHHHHHHHHhcCCCCCE
Confidence            46  8999999999999999999999999 9999999877655432111  122 2246665 33   233322213999


Q ss_pred             EEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          139 VVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +|+|+|.         ......++.++..  +++|.++...
T Consensus       234 vi~~~G~---------~~~~~~~~~l~~~--G~iv~~G~~~  263 (357)
T 2zb4_A          234 YFDNVGG---------NISDTVISQMNEN--SHIILCGQIS  263 (357)
T ss_dssp             EEESCCH---------HHHHHHHHTEEEE--EEEEECCCGG
T ss_pred             EEECCCH---------HHHHHHHHHhccC--cEEEEECCcc
Confidence            9999982         1124445544443  4899887754

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.01  E-value=1e-05  Score=70.91  Aligned_cols=97  Identities=15%  Similarity=0.208  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH---HHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA---KLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~~~-~~d~vv  140 (296)
                      .+++|+|+||+|++|..+++.+...|++|++++|++++.+.... .  +... ..|..+ .+   .+.+...+ .+|+||
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~--ga~~-~~d~~~-~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-N--GAHE-VFNHRE-VNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T--TCSE-EEETTS-TTHHHHHHHHHCTTCEEEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-c--CCCE-EEeCCC-chHHHHHHHHcCCCCcEEEE
Confidence            47899999999999999999999999999999998876653322 1  2221 246655 33   33444432 499999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +|+|..         .....++.++..  +++|.++.
T Consensus       245 ~~~G~~---------~~~~~~~~l~~~--G~iv~~g~  270 (351)
T 1yb5_A          245 EMLANV---------NLSKDLSLLSHG--GRVIVVGS  270 (351)
T ss_dssp             ESCHHH---------HHHHHHHHEEEE--EEEEECCC
T ss_pred             ECCChH---------HHHHHHHhccCC--CEEEEEec
Confidence            999831         123344544443  48888774

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.00  E-value=8.4e-06  Score=71.57  Aligned_cols=98  Identities=7%  Similarity=0.005  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH---HHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA---KLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~~~-~~d~vv  140 (296)
                      .+++|+|+||+|+||..+++.+...|++|++++|++++.+.... .  +.. ...|..+ .+   .+.+...+ .+|++|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~--g~~-~~~~~~~-~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK-L--GAA-AGFNYKK-EDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-H--TCS-EEEETTT-SCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CCc-EEEecCC-hHHHHHHHHHhcCCCceEEE
Confidence            46899999999999999999999999999999998876554321 1  122 2246655 33   34443332 499999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +|+|..         .....++.++..  +++|.++..
T Consensus       237 ~~~G~~---------~~~~~~~~l~~~--G~iv~~G~~  263 (354)
T 2j8z_A          237 DCIGGS---------YWEKNVNCLALD--GRWVLYGLM  263 (354)
T ss_dssp             ESSCGG---------GHHHHHHHEEEE--EEEEECCCT
T ss_pred             ECCCch---------HHHHHHHhccCC--CEEEEEecc
Confidence            999841         123445555544  489888764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=98.00  E-value=1.8e-05  Score=66.79  Aligned_cols=70  Identities=13%  Similarity=0.241  Sum_probs=54.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++++++|+|+ |++|+.++..|.+.|. +|++..|++++..++..    .+..+     . .+.+.+.+.+ .|+||+
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~----~~~~~-----~-~~~~~~~~~~-aDiVIn  181 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL----NINKI-----N-LSHAESHLDE-FDIIIN  181 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS----CCEEE-----C-HHHHHHTGGG-CSEEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH----hcccc-----c-HhhHHHHhcC-CCEEEE
Confidence            567899999996 9999999999999998 89999999988765542    22221     2 3456666777 999999


Q ss_pred             cCC
Q 022495          142 ATG  144 (296)
Q Consensus       142 ~ag  144 (296)
                      +.+
T Consensus       182 aTp  184 (277)
T 3don_A          182 TTP  184 (277)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.99  E-value=2.4e-05  Score=68.96  Aligned_cols=98  Identities=16%  Similarity=0.158  Sum_probs=70.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+++|+|+|+ |.||..+++.+...|++|+++++++++........  +... ..|..+ .+.+.+...+ +|+||.++|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l--Ga~~-v~~~~~-~~~~~~~~~~-~D~vid~~g  260 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF--GADS-FLVSRD-QEQMQAAAGT-LDGIIDTVS  260 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS--CCSE-EEETTC-HHHHHHTTTC-EEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--CCce-EEeccC-HHHHHHhhCC-CCEEEECCC
Confidence            5789999996 99999999999999999999999887765433111  2222 246677 6777776677 999999998


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .....        ...++.++..  +++|.+++.
T Consensus       261 ~~~~~--------~~~~~~l~~~--G~iv~~g~~  284 (366)
T 1yqd_A          261 AVHPL--------LPLFGLLKSH--GKLILVGAP  284 (366)
T ss_dssp             SCCCS--------HHHHHHEEEE--EEEEECCCC
T ss_pred             cHHHH--------HHHHHHHhcC--CEEEEEccC
Confidence            53211        3455666554  489988875

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.99  E-value=9.1e-06  Score=69.54  Aligned_cols=77  Identities=18%  Similarity=0.302  Sum_probs=56.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++++++|+|+ |++|+.++..|++.|. +|++..|++++..++.........    ++.+ .+.+.+.+.+ +|+||+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~-~~~~~~~~~~-aDivIn  210 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFS-LAEAETRLAE-YDIIIN  210 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEEC-HHHHHHTGGG-CSEEEE
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceee-HHHHHhhhcc-CCEEEE
Confidence            567899999997 8999999999999997 999999998776654321111110    2223 3556677788 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +++..
T Consensus       211 ~t~~~  215 (297)
T 2egg_A          211 TTSVG  215 (297)
T ss_dssp             CSCTT
T ss_pred             CCCCC
Confidence            98754

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.98  E-value=1.7e-05  Score=69.25  Aligned_cols=101  Identities=14%  Similarity=0.138  Sum_probs=65.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC---hHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG---SAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~~~~~d~vv~  141 (296)
                      .+++|||+||+|+||..+++.+...|++|+++++++++.+......  +... ..|..+.   .+.+.+...+.+|+||+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~--g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~  231 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF--GFDD-AFNYKEESDLTAALKRCFPNGIDIYFE  231 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS--CCSE-EEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCce-EEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence            4789999999999999999999999999999999887765433111  2221 2366541   12333332213999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      |+|..         .....++.++..  +++|.++...
T Consensus       232 ~~g~~---------~~~~~~~~l~~~--G~~v~~G~~~  258 (345)
T 2j3h_A          232 NVGGK---------MLDAVLVNMNMH--GRIAVCGMIS  258 (345)
T ss_dssp             SSCHH---------HHHHHHTTEEEE--EEEEECCCGG
T ss_pred             CCCHH---------HHHHHHHHHhcC--CEEEEEcccc
Confidence            99731         113344444433  4888887653

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.98  E-value=1.9e-05  Score=65.71  Aligned_cols=103  Identities=21%  Similarity=0.284  Sum_probs=68.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCc-------------------chhhhc---ccCCCC--CeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL-------------------DKAKTT---LSKDNP--SLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~---~~~~~~--~~~~~  117 (296)
                      .+++++|+|+|+ |++|+.+++.|+..|. ++++++++.                   .+....   +...++  +++.+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            356789999996 9999999999999996 888888886                   332221   111122  34555


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ..++.+  +.+.+.+++ +|+||.+...        ......+.+.+++.++ .+|+.+..
T Consensus       107 ~~~~~~--~~~~~~~~~-~DvVi~~~d~--------~~~~~~l~~~~~~~~~-p~i~~~~~  155 (249)
T 1jw9_B          107 NALLDD--AELAALIAE-HDLVLDCTDN--------VAVRNQLNAGCFAAKV-PLVSGAAI  155 (249)
T ss_dssp             CSCCCH--HHHHHHHHT-SSEEEECCSS--------HHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred             eccCCH--hHHHHHHhC-CCEEEEeCCC--------HHHHHHHHHHHHHcCC-CEEEeeec
Confidence            555653  456777888 9999988641        1122556677777775 56665443

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.97  E-value=1.3e-06  Score=74.57  Aligned_cols=79  Identities=16%  Similarity=0.183  Sum_probs=54.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCC---eEEEEcccCCChHHHHHHhcCCCCE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPS---LQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      .++++++++|||+ |++|+++++.|+++| +|++.+|+.++..++.......   ...+.+|+.| .   .+.+.+ +|+
T Consensus       124 ~~l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~-~---~~~~~~-~Di  196 (287)
T 1nvt_A          124 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG-L---DVDLDG-VDI  196 (287)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC-T---TCCCTT-CCE
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee-H---HHhhCC-CCE
Confidence            4678899999998 499999999999999 9999999987655432100000   0012345544 2   334566 999


Q ss_pred             EEEcCCCCC
Q 022495          139 VVCATGFQP  147 (296)
Q Consensus       139 vv~~ag~~~  147 (296)
                      ||+|+|...
T Consensus       197 lVn~ag~~~  205 (287)
T 1nvt_A          197 IINATPIGM  205 (287)
T ss_dssp             EEECSCTTC
T ss_pred             EEECCCCCC
Confidence            999998643

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.97  E-value=1e-05  Score=70.66  Aligned_cols=95  Identities=19%  Similarity=0.162  Sum_probs=60.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-----C-eEEEEEcCcc--h-hhhcccCC-C-CCeEEEEcccCCChHHHHHHhc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-----F-AVKAGVRDLD--K-AKTTLSKD-N-PSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-----~-~V~~~~r~~~--~-~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      ++++|+|.||||.+|+.+++.|++++     . +++++.+...  + ........ . ..+.+  .|+ | .    +.+.
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~-~----~~~~   79 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-E-A----AVLG   79 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-C-H----HHHT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-C-H----HHhc
Confidence            45799999999999999999999887     3 6777754321  1 22111100 0 11111  122 2 2    2356


Q ss_pred             CCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          134 DDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      + +|+||.|+|....         ..+++.+ +.|+ ++|-+|+..
T Consensus        80 ~-~DvVf~alg~~~s---------~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           80 G-HDAVFLALPHGHS---------AVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             T-CSEEEECCTTSCC---------HHHHHHS-CTTS-EEEECSSTT
T ss_pred             C-CCEEEECCCCcch---------HHHHHHH-hCCC-EEEEECCCc
Confidence            7 9999999875321         5677888 7775 788888875

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.95  E-value=2.1e-05  Score=68.49  Aligned_cols=93  Identities=18%  Similarity=0.237  Sum_probs=71.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      .++++|.|+ |.+|+.+++.|.++|+ |++++++++..+ ..   ..++.++.+|.+| ++.++++ +++ +|.||.+.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~---~~~~~~i~gd~~~-~~~L~~a~i~~-a~~vi~~~~  186 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL---RSGANFVHGDPTR-VSDLEKANVRG-ARAVIVDLE  186 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH---HTTCEEEESCTTS-HHHHHHTCSTT-EEEEEECCS
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH---hCCcEEEEeCCCC-HHHHHhcChhh-ccEEEEcCC
Confidence            458999996 9999999999999999 999999988776 43   2578999999999 8888877 677 999998764


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCC-EEEE
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVN-RFIL  174 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~  174 (296)
                              .......++..+++.+.+ ++|-
T Consensus       187 --------~d~~n~~~~~~ar~~~~~~~iia  209 (336)
T 1lnq_A          187 --------SDSETIHCILGIRKIDESVRIIA  209 (336)
T ss_dssp             --------SHHHHHHHHHHHHTTCTTSEEEE
T ss_pred             --------ccHHHHHHHHHHHHHCCCCeEEE
Confidence                    122224555667776654 5543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.94  E-value=2.3e-05  Score=71.19  Aligned_cols=74  Identities=24%  Similarity=0.374  Sum_probs=61.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      .|+|+|.|+ |-+|+++++.|.++|++|++++++++....+..  .-++..+.+|.++ ++.++++ ++. +|.+|.+.+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~--~~~~~~i~Gd~~~-~~~L~~Agi~~-ad~~ia~t~   77 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQD--KYDLRVVNGHASH-PDVLHEAGAQD-ADMLVAVTN   77 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHH--HSSCEEEESCTTC-HHHHHHHTTTT-CSEEEECCS
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--hcCcEEEEEcCCC-HHHHHhcCCCc-CCEEEEEcC
Confidence            579999997 999999999999999999999999987765432  2368899999999 8888887 455 999997654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.94  E-value=5.2e-05  Score=65.49  Aligned_cols=105  Identities=17%  Similarity=0.211  Sum_probs=64.8

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhh----cccC--CCCCeEEEEcccCCChHHHHHHhcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKT----TLSK--DNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      +.++++|.|+|+ |++|+.++..|+..|.  +|+++++++++++.    +...  ....+.+...|        .+.+++
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--------~~a~~~   76 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--------YSDAKD   76 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--------GGGGTT
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--------HHHhcC
Confidence            345789999996 9999999999999886  89999998765542    1110  01234433322        234777


Q ss_pred             CCCEEEEcCCCCCCCC--C--cchhHH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          135 DSEAVVCATGFQPGWD--L--FAPWKA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~--~--~~~~~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                       +|+||.+||......  .  ....+.   +.+.+.+.+.... .++.+|.
T Consensus        77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred             -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence             999999999754321  1  111121   7888888877633 5555543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.93  E-value=1.4e-05  Score=70.35  Aligned_cols=100  Identities=18%  Similarity=0.130  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv~~  142 (296)
                      .+++|+|+||+|++|..+++.+...|++|+++++++++.+....   -+...+ .|..+.  .+.+.+...+.+|+||+|
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~  238 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS---LGCDRP-INYKTEPVGTVLKQEYPEGVDVVYES  238 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCSEE-EETTTSCHHHHHHHHCTTCEEEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH---cCCcEE-EecCChhHHHHHHHhcCCCCCEEEEC
Confidence            47899999999999999999999999999999998776554332   122221 244431  122333222139999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +|.         ......++.++..  +++|.+++..
T Consensus       239 ~g~---------~~~~~~~~~l~~~--G~iv~~g~~~  264 (362)
T 2c0c_A          239 VGG---------AMFDLAVDALATK--GRLIVIGFIS  264 (362)
T ss_dssp             SCT---------HHHHHHHHHEEEE--EEEEECCCGG
T ss_pred             CCH---------HHHHHHHHHHhcC--CEEEEEeCCC
Confidence            983         1224556665554  4899988764

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.92  E-value=0.00012  Score=63.27  Aligned_cols=102  Identities=16%  Similarity=0.151  Sum_probs=66.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhh----cccC---CCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKT----TLSK---DNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      .++|.|+|+ |++|..++..|+..|.  +|+++++++++++.    +...   ....+.+...|.        +++++ +
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~--------~a~~~-a   74 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY--------EDCKD-A   74 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG--------GGGTT-C
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH--------HHhCC-C
Confidence            579999996 9999999999999986  89999998765442    1110   112344433221        34677 9


Q ss_pred             CEEEEcCCCCCCCCCcc----hhHH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          137 EAVVCATGFQPGWDLFA----PWKA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~----~~~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      |+||.++|.........    ..+.   +.+++.+.+.... .++.+|.
T Consensus        75 DvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           75 DIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             CEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            99999999754332211    1111   7777887777633 5555553

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.92  E-value=1.7e-05  Score=67.21  Aligned_cols=73  Identities=16%  Similarity=0.252  Sum_probs=51.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      .++++++++|+|+ |++|+.++..|.+.|. +|++..|++++..++...  ....+..+  ++.+ ..      .+ .|+
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~-l~------~~-aDi  190 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ-LK------QS-YDV  190 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG-CC------SC-EEE
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH-hc------CC-CCE
Confidence            4567899999997 8999999999999995 999999998876543321  01123333  3323 11      45 999


Q ss_pred             EEEcCCC
Q 022495          139 VVCATGF  145 (296)
Q Consensus       139 vv~~ag~  145 (296)
                      ||++.+.
T Consensus       191 IInaTp~  197 (281)
T 3o8q_A          191 IINSTSA  197 (281)
T ss_dssp             EEECSCC
T ss_pred             EEEcCcC
Confidence            9998754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.91  E-value=1.7e-05  Score=66.82  Aligned_cols=72  Identities=22%  Similarity=0.318  Sum_probs=51.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCC-CCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDN-PSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ++++++++|+|+ |++|+.++..|.+.|. +|++..|++++..++..... ..+..+  ++.+    +..  .+ .|+||
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~----l~~--~~-~DivI  186 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEA----LEG--QS-FDIVV  186 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGG----GTT--CC-CSEEE
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHH----hcc--cC-CCEEE
Confidence            567899999997 8999999999999995 99999999887665432111 123332  2222    221  55 99999


Q ss_pred             EcCC
Q 022495          141 CATG  144 (296)
Q Consensus       141 ~~ag  144 (296)
                      ++..
T Consensus       187 naTp  190 (272)
T 3pwz_A          187 NATS  190 (272)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            9864

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.90  E-value=1.9e-05  Score=68.65  Aligned_cols=99  Identities=14%  Similarity=0.119  Sum_probs=67.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~-~~d~vv~  141 (296)
                      .+++|||+||+|.+|..+++.+...|++|+++++++++.+.... .  +... ..|..+.  .+.+.+...+ .+|+||+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~--ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vid  223 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-Y--GAEY-LINASKEDILRQVLKFTNGKGVDASFD  223 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T--TCSE-EEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c--CCcE-EEeCCCchHHHHHHHHhCCCCceEEEE
Confidence            47899999999999999999999999999999998877653332 1  1221 1344441  2334444432 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |+|..         .....++.++..  +++|.++..
T Consensus       224 ~~g~~---------~~~~~~~~l~~~--G~iv~~G~~  249 (334)
T 3qwb_A          224 SVGKD---------TFEISLAALKRK--GVFVSFGNA  249 (334)
T ss_dssp             CCGGG---------GHHHHHHHEEEE--EEEEECCCT
T ss_pred             CCChH---------HHHHHHHHhccC--CEEEEEcCC
Confidence            99841         124455655554  489988764

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.90  E-value=7.6e-06  Score=75.63  Aligned_cols=75  Identities=20%  Similarity=0.233  Sum_probs=47.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++++++++|||| |++|++++..|++.|++|++..|+.++..++.......+  +  ++.| .+.+  .... +|+||||
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~--~--~~~d-l~~~--~~~~-~DilVN~  431 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKA--L--SLTD-LDNY--HPED-GMVLANT  431 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-C--E--ETTT-TTTC----CC-SEEEEEC
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCce--e--eHHH-hhhc--cccC-ceEEEEC
Confidence            456889999999 799999999999999999999999877665432111122  1  2223 2111  1234 8999999


Q ss_pred             CCCC
Q 022495          143 TGFQ  146 (296)
Q Consensus       143 ag~~  146 (296)
                      +|..
T Consensus       432 agvg  435 (523)
T 2o7s_A          432 TSMG  435 (523)
T ss_dssp             SSTT
T ss_pred             CCCC
Confidence            9863

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.88  E-value=1.2e-05  Score=70.68  Aligned_cols=105  Identities=15%  Similarity=0.175  Sum_probs=68.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +++++|+|+|+ |.+|+.+++.|...|++|++.+|++++.+.........+..   +..+ .+.+.+.+.+ +|+||+++
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~-~DvVI~~~  238 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSN-SAEIETAVAE-ADLLIGAV  238 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECC-HHHHHHHHHT-CSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEe---eeCC-HHHHHHHHcC-CCEEEECC
Confidence            45689999998 99999999999999999999999987765432100112212   2234 4567777778 99999999


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +..........  ....++.++..  +.+|.+++.
T Consensus       239 ~~~~~~~~~li--~~~~~~~~~~g--~~ivdv~~~  269 (361)
T 1pjc_A          239 LVPGRRAPILV--PASLVEQMRTG--SVIVDVAVD  269 (361)
T ss_dssp             CCTTSSCCCCB--CHHHHTTSCTT--CEEEETTCT
T ss_pred             CcCCCCCCeec--CHHHHhhCCCC--CEEEEEecC
Confidence            86432111100  03344545432  478877764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.85  E-value=1.9e-05  Score=68.41  Aligned_cols=99  Identities=14%  Similarity=0.119  Sum_probs=66.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~-~~d~vv~  141 (296)
                      .+++|+|+||+|.+|..+++.+...|++|+++++++++.+.... .  +... ..|..+.  .+.+.+...+ .+|+||+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~--Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid  215 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-L--GAWE-TIDYSHEDVAKRVLELTDGKKCPVVYD  215 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H--TCSE-EEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c--CCCE-EEeCCCccHHHHHHHHhCCCCceEEEE
Confidence            47899999999999999999999999999999998877654332 1  1211 1344441  2334444432 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |+|..         .....++.++..  +++|.++..
T Consensus       216 ~~g~~---------~~~~~~~~l~~~--G~iv~~g~~  241 (325)
T 3jyn_A          216 GVGQD---------TWLTSLDSVAPR--GLVVSFGNA  241 (325)
T ss_dssp             SSCGG---------GHHHHHTTEEEE--EEEEECCCT
T ss_pred             CCChH---------HHHHHHHHhcCC--CEEEEEecC
Confidence            99841         113444444443  489988765

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.85  E-value=3.3e-06  Score=68.51  Aligned_cols=73  Identities=22%  Similarity=0.290  Sum_probs=49.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      |+|+|+||+|++|+.+++.|++.|++|++++|++++.+.+.......+.  ..|+.  .+++.+++++ +|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~-~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG--DASIT--GMKNEDAAEA-CDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS--SCCEE--EEEHHHHHHH-CSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccc--cCCCC--hhhHHHHHhc-CCEEEEeCC
Confidence            4799999999999999999999999999999998765443210000000  01221  1224455667 999999974

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.84  E-value=4.8e-06  Score=63.27  Aligned_cols=71  Identities=18%  Similarity=0.307  Sum_probs=52.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++.+|++++..++....  ++...  +.    +.+.+.+.+ +|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~--~~~~~--~~----~~~~~~~~~-~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY--EYEYV--LI----NDIDSLIKN-NDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH--TCEEE--EC----SCHHHHHHT-CSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh--CCceE--ee----cCHHHHhcC-CCEEEEeCCC
Confidence            789999996 99999999999999999999999988765533211  12221  22    235566777 9999999875


Q ss_pred             C
Q 022495          146 Q  146 (296)
Q Consensus       146 ~  146 (296)
                      .
T Consensus        91 ~   91 (144)
T 3oj0_A           91 K   91 (144)
T ss_dssp             S
T ss_pred             C
Confidence            4

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.84  E-value=3.1e-05  Score=67.55  Aligned_cols=100  Identities=18%  Similarity=0.193  Sum_probs=64.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~a  143 (296)
                      .+++|||+||+|.||..+++.+...|++|+++++++++.+.... .... .++..+ .+..+.+.+...+ .+|++|+|+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~-~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~  235 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGAD-IVLPLE-EGWAKAVREATGGAGVDMVVDPI  235 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCS-EEEESS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCc-EEecCc-hhHHHHHHHHhCCCCceEEEECC
Confidence            47899999999999999999999999999999998877653332 1111 223233 2313445555443 499999999


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |..         .....++.++..  +++|.++..
T Consensus       236 g~~---------~~~~~~~~l~~~--G~iv~~G~~  259 (342)
T 4eye_A          236 GGP---------AFDDAVRTLASE--GRLLVVGFA  259 (342)
T ss_dssp             C-----------CHHHHHHTEEEE--EEEEEC---
T ss_pred             chh---------HHHHHHHhhcCC--CEEEEEEcc
Confidence            842         113455555444  488888754

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.82  E-value=2.7e-05  Score=68.12  Aligned_cols=99  Identities=13%  Similarity=0.159  Sum_probs=64.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH---HHHHhc-CCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK---LSEAIG-DDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~---~~~~~~-~~~d~v  139 (296)
                      .+++|+|+||+|+||..+++.+... |++|+++++++++.+.... .  +... ..|..+ .+.   +.+... +.+|+|
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~-~--g~~~-~~~~~~-~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A--GADY-VINASM-QDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H--TCSE-EEETTT-SCHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-h--CCCE-EecCCC-ccHHHHHHHHhcCCCceEE
Confidence            4789999999999999999999999 9999999998876553321 1  1221 235555 333   455443 239999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |+|+|...        .....++.++..  +++|.++..
T Consensus       245 i~~~g~~~--------~~~~~~~~l~~~--G~iv~~g~~  273 (347)
T 1jvb_A          245 IDLNNSEK--------TLSVYPKALAKQ--GKYVMVGLF  273 (347)
T ss_dssp             EESCCCHH--------HHTTGGGGEEEE--EEEEECCSS
T ss_pred             EECCCCHH--------HHHHHHHHHhcC--CEEEEECCC
Confidence            99998420        112233333333  488887764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.82  E-value=2.8e-05  Score=67.80  Aligned_cols=99  Identities=14%  Similarity=0.168  Sum_probs=64.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~-~~d~vv~  141 (296)
                      .+++|+|+||+|.+|..+++.+...|++|+++++++++.+.... .  +... ..|..+.  .+.+.+...+ .+|+||+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l--ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid  219 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L--GAAY-VIDTSTAPLYETVMELTNGIGADAAID  219 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H--TCSE-EEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C--CCcE-EEeCCcccHHHHHHHHhCCCCCcEEEE
Confidence            47899999999999999999998899999999998877654332 1  1221 1244441  2334444332 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |+|..         .....++.++..  +++|.++..
T Consensus       220 ~~g~~---------~~~~~~~~l~~~--G~iv~~G~~  245 (340)
T 3gms_A          220 SIGGP---------DGNELAFSLRPN--GHFLTIGLL  245 (340)
T ss_dssp             SSCHH---------HHHHHHHTEEEE--EEEEECCCT
T ss_pred             CCCCh---------hHHHHHHHhcCC--CEEEEEeec
Confidence            99832         112233433333  589988765

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.82  E-value=2.8e-05  Score=68.17  Aligned_cols=99  Identities=13%  Similarity=0.139  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv~~  142 (296)
                      .+++|+|+||+|.||..+++.+...|++|+++++++++.+.... .  +... ..|..+.  .+.+.+...+.+|++|+|
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l--Ga~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~  242 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L--GAKR-GINYRSEDFAAVIKAETGQGVDIILDM  242 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H--TCSE-EEETTTSCHHHHHHHHHSSCEEEEEES
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c--CCCE-EEeCCchHHHHHHHHHhCCCceEEEEC
Confidence            46899999999999999999999999999999999877654332 1  1221 1344441  233333332249999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +|..         .....++.++..  +++|.++..
T Consensus       243 ~g~~---------~~~~~~~~l~~~--G~iv~~g~~  267 (353)
T 4dup_A          243 IGAA---------YFERNIASLAKD--GCLSIIAFL  267 (353)
T ss_dssp             CCGG---------GHHHHHHTEEEE--EEEEECCCT
T ss_pred             CCHH---------HHHHHHHHhccC--CEEEEEEec
Confidence            9841         123445555443  488888765

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.82  E-value=3.2e-05  Score=67.44  Aligned_cols=98  Identities=15%  Similarity=0.111  Sum_probs=66.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv~~  142 (296)
                      .+++|||+|| |++|..+++.+...|++|+++++++++.+....   -++.. ..|..+.  .+.+.+...+ +|+||++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---lGa~~-~~d~~~~~~~~~~~~~~~~-~d~vid~  237 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE---LGADL-VVNPLKEDAAKFMKEKVGG-VHAAVVT  237 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---TTCSE-EECTTTSCHHHHHHHHHSS-EEEEEES
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---CCCCE-EecCCCccHHHHHHHHhCC-CCEEEEC
Confidence            4789999999 789999999999999999999998877654332   12222 2466541  1233343356 9999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +|..        ......++.++..  +++|.+++.
T Consensus       238 ~g~~--------~~~~~~~~~l~~~--G~~v~~g~~  263 (339)
T 1rjw_A          238 AVSK--------PAFQSAYNSIRRG--GACVLVGLP  263 (339)
T ss_dssp             SCCH--------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             CCCH--------HHHHHHHHHhhcC--CEEEEeccc
Confidence            9831        1224455555544  489888764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.81  E-value=4.8e-05  Score=66.54  Aligned_cols=99  Identities=17%  Similarity=0.135  Sum_probs=65.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcC-CCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~-~~d~vv~~  142 (296)
                      +++++|+||+|.+|...++.+...|++|+++++++++.+.... .  +... ..|..+.  .+.+.+...+ .+|+||+|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-~--Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vid~  240 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD-I--GAAH-VLNEKAPDFEATLREVMKAEQPRIFLDA  240 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH-H--TCSE-EEETTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c--CCCE-EEECCcHHHHHHHHHHhcCCCCcEEEEC
Confidence            3799999999999999999999999999999998877654332 1  1221 1344441  2334443321 39999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +|..         .....++.++..  +++|.+++..
T Consensus       241 ~g~~---------~~~~~~~~l~~~--G~iv~~G~~~  266 (349)
T 3pi7_A          241 VTGP---------LASAIFNAMPKR--ARWIIYGRLD  266 (349)
T ss_dssp             SCHH---------HHHHHHHHSCTT--CEEEECCCSC
T ss_pred             CCCh---------hHHHHHhhhcCC--CEEEEEeccC
Confidence            9831         113455555444  5899987653

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.80  E-value=1.3e-05  Score=67.66  Aligned_cols=75  Identities=17%  Similarity=0.214  Sum_probs=52.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCC--CCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ++++++++|+|+ |++|+.++..|++.|.+|++..|+.++..++.....  ..+..  .|+.+    +.+  .+ +|+||
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~~~----~~~--~~-~DivI  185 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSMDS----IPL--QT-YDLVI  185 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEGGG----CCC--SC-CSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeHHH----hcc--CC-CCEEE
Confidence            567899999997 899999999999999999999999877654432100  12222  23322    111  36 99999


Q ss_pred             EcCCCCC
Q 022495          141 CATGFQP  147 (296)
Q Consensus       141 ~~ag~~~  147 (296)
                      ++++...
T Consensus       186 n~t~~~~  192 (272)
T 1p77_A          186 NATSAGL  192 (272)
T ss_dssp             ECCCC--
T ss_pred             ECCCCCC
Confidence            9998543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.80  E-value=7e-05  Score=64.40  Aligned_cols=103  Identities=16%  Similarity=0.142  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccC--C-----CCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSK--D-----NPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--~-----~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      +++|.|+|| |.+|..++..|+..|. +|+++++++++++.....  .     ....++..  ..|    . +++++ +|
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~--t~d----~-~a~~~-aD   72 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG--TNN----Y-ADTAN-SD   72 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE--ESC----G-GGGTT-CS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE--CCC----H-HHHCC-CC
Confidence            368999998 9999999999999996 888888887655421110  0     01111111  022    2 34778 99


Q ss_pred             EEEEcCCCCCCCCCc--c--hhHH---HHHHHHHHHcCCCEEEEEcc
Q 022495          138 AVVCATGFQPGWDLF--A--PWKA---INLVEACRKRGVNRFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~--~--~~~~---~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +||.++|........  .  ..+.   +.+.+.+.+.....+|.+.|
T Consensus        73 ~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           73 VIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            999999875432211  1  1111   67778777776555555444

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.78  E-value=4.4e-05  Score=65.37  Aligned_cols=96  Identities=20%  Similarity=0.197  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+++|+|+||+|.+|..+++.+...|++|+++++++++.+....   -+...+ .|..+ .+.+.+.+++ +|++|+ +|
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~ga~~~-~~~~~-~~~~~~~~~~-~d~vid-~g  197 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA---LGAEEA-ATYAE-VPERAKAWGG-LDLVLE-VR  197 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH---TTCSEE-EEGGG-HHHHHHHTTS-EEEEEE-CS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---cCCCEE-EECCc-chhHHHHhcC-ceEEEE-CC
Confidence            47899999999999999999999999999999998876654322   122221 34433 2445555577 999999 87


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ..    .     ....++.++..  +++|.++..
T Consensus       198 ~~----~-----~~~~~~~l~~~--G~~v~~g~~  220 (302)
T 1iz0_A          198 GK----E-----VEESLGLLAHG--GRLVYIGAA  220 (302)
T ss_dssp             CT----T-----HHHHHTTEEEE--EEEEEC---
T ss_pred             HH----H-----HHHHHHhhccC--CEEEEEeCC
Confidence            41    1     13444544444  488887764

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.77  E-value=0.00016  Score=61.17  Aligned_cols=69  Identities=16%  Similarity=0.320  Sum_probs=52.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      .++++++++|+|+ |+.|+.++..|.+.|. +|++..|++++..++..    .+..+  +    .+.+.+ + + .|+||
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~----~~~~~--~----~~~l~~-l-~-~DivI  183 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG----EFKVI--S----YDELSN-L-K-GDVII  183 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT----TSEEE--E----HHHHTT-C-C-CSEEE
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH----hcCcc--c----HHHHHh-c-c-CCEEE
Confidence            4567899999996 8999999999999997 89999999988776552    23222  2    233444 4 6 99999


Q ss_pred             EcCC
Q 022495          141 CATG  144 (296)
Q Consensus       141 ~~ag  144 (296)
                      ++..
T Consensus       184 naTp  187 (282)
T 3fbt_A          184 NCTP  187 (282)
T ss_dssp             ECSS
T ss_pred             ECCc
Confidence            9874

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.74  E-value=0.00031  Score=58.47  Aligned_cols=69  Identities=23%  Similarity=0.391  Sum_probs=52.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .+++ +++|+|+ |+.|++++..|++.|. +|++..|++++.+++..    .+..+  +    .+.+.+.+.+ .|+||+
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~----~~~~~--~----~~~~~~~~~~-aDiVIn  172 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF----PVKIF--S----LDQLDEVVKK-AKSLFN  172 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS----SCEEE--E----GGGHHHHHHT-CSEEEE
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH----HcccC--C----HHHHHhhhcC-CCEEEE
Confidence            3567 9999996 9999999999999997 89999999988776542    22221  2    2335566777 999999


Q ss_pred             cCC
Q 022495          142 ATG  144 (296)
Q Consensus       142 ~ag  144 (296)
                      +..
T Consensus       173 atp  175 (253)
T 3u62_A          173 TTS  175 (253)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            874

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.70  E-value=0.0001  Score=62.91  Aligned_cols=38  Identities=29%  Similarity=0.482  Sum_probs=32.9

Q ss_pred             cCCCCe-EEEE-cCC-----------------chHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           63 SVKQKK-IFVA-GAT-----------------GSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        63 ~~~~~~-ilVt-Ga~-----------------G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      ++.|++ |||| |||                 |..|.++|+.++++|++|+++.+..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            456788 9999 556                 8899999999999999999999864

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.70  E-value=1.6e-05  Score=61.30  Aligned_cols=68  Identities=9%  Similarity=0.106  Sum_probs=49.3

Q ss_pred             chHHHHHHHHHHHCCCeEEEEEcCcchhh------hcccCCCCCeEEEEcccCCCh--HHHHHHhc------CCCCEEEE
Q 022495           76 GSSGKRIVEQLLAKGFAVKAGVRDLDKAK------TTLSKDNPSLQIVKADVTEGS--AKLSEAIG------DDSEAVVC  141 (296)
Q Consensus        76 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~D~~d~~--~~~~~~~~------~~~d~vv~  141 (296)
                      |.++...++.|.+.|++|++..|+.....      +.....+.++..+.+|+++ +  +.+.+++.      ++ |++||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~-~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQN-PKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTS-CCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCC-CCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            67889999999999999998888654321      1121134456778899999 6  66665543      24 99999


Q ss_pred             cCCC
Q 022495          142 ATGF  145 (296)
Q Consensus       142 ~ag~  145 (296)
                      |||.
T Consensus       104 nAgg  107 (157)
T 3gxh_A          104 CLAN  107 (157)
T ss_dssp             CSBS
T ss_pred             CCCC
Confidence            9986

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.69  E-value=0.00023  Score=61.43  Aligned_cols=105  Identities=15%  Similarity=0.112  Sum_probs=65.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhc----ccC---CCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----LSK---DNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      |++++|.|+|+ |.+|..++..|+..|. +|+++++++++.+..    ...   ......+...  .| .    +++++ 
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d-~----~a~~~-   75 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--ND-Y----AAIEG-   75 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SS-G----GGGTT-
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CC-H----HHHCC-
Confidence            45789999998 9999999999999998 999999998765311    100   0011222210  12 1    45778 


Q ss_pred             CCEEEEcCCCCCCCCCc--c--hhHH---HHHHHHHHHcCC-CEEEEEcc
Q 022495          136 SEAVVCATGFQPGWDLF--A--PWKA---INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~--~--~~~~---~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      +|+||.++|........  +  ..+.   +.+++.+.+... ..+|.+|.
T Consensus        76 aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           76 ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            99999999975433211  1  1121   777777777653 35666554

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.69  E-value=4.7e-05  Score=66.56  Aligned_cols=99  Identities=14%  Similarity=0.096  Sum_probs=65.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~-~~d~vv  140 (296)
                      .+++|||+|+ |.+|..+++.+...|+ +|+++++++++.+....   -++..+ .|..+.  .+.+.+...+ .+|+||
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~---~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vi  241 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK---VGADYV-INPFEEDVVKEVMDITDGNGVDVFL  241 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH---HTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH---hCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEE
Confidence            5789999999 9999999999999998 99999998776553321   122221 354441  1233343332 399999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +++|..        ......++.++..  +++|.+++.
T Consensus       242 d~~g~~--------~~~~~~~~~l~~~--G~iv~~g~~  269 (348)
T 2d8a_A          242 EFSGAP--------KALEQGLQAVTPA--GRVSLLGLY  269 (348)
T ss_dssp             ECSCCH--------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             ECCCCH--------HHHHHHHHHHhcC--CEEEEEccC
Confidence            999831        1124455555544  489988764

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.69  E-value=3.2e-05  Score=67.15  Aligned_cols=100  Identities=14%  Similarity=0.128  Sum_probs=63.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhccc---------CCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLS---------KDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      .++|.|+|| |.+|..++..|+..|+ +|+++++++++++....         ....++.. .   +|    +.+++++ 
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d----~~ea~~~-   78 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YS----YEAALTG-   78 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CS----HHHHHTT-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CC----HHHHhCC-
Confidence            468999998 9999999999999998 99999999866543110         01111211 0   23    4556788 


Q ss_pred             CCEEEEcCCCCCCCCC-------cch--hH---HHHHHHHHHHcCCCEEEEE
Q 022495          136 SEAVVCATGFQPGWDL-------FAP--WK---AINLVEACRKRGVNRFILI  175 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~-------~~~--~~---~~~~l~~~~~~~~~~iV~~  175 (296)
                      +|+||.++|.......       ...  .+   .+.+++.+.+....-++.+
T Consensus        79 aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~  130 (331)
T 1pzg_A           79 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIV  130 (331)
T ss_dssp             CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence            9999999986543322       111  11   1677777776653333333

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.66  E-value=0.00016  Score=65.51  Aligned_cols=103  Identities=18%  Similarity=0.152  Sum_probs=65.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEE--cccCCC---------------hHH
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVK--ADVTEG---------------SAK  127 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~D~~d~---------------~~~  127 (296)
                      .+++|+|+||+|.||...++.+...|++|+++++++++.+.... ......+-.  .|+.+.               .+.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA-LGCDLVINRAELGITDDIADDPRRVVETGRKLAKL  298 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCEEEecccccccccccccccccchhhhHHHHH
Confidence            47899999999999999999999999999999998877654332 112211111  122110               123


Q ss_pred             HHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          128 LSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       128 ~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +.+...+.+|+||+|+|..         .....++.++..  +++|.+++..
T Consensus       299 v~~~~g~g~Dvvid~~G~~---------~~~~~~~~l~~~--G~iv~~G~~~  339 (447)
T 4a0s_A          299 VVEKAGREPDIVFEHTGRV---------TFGLSVIVARRG--GTVVTCGSSS  339 (447)
T ss_dssp             HHHHHSSCCSEEEECSCHH---------HHHHHHHHSCTT--CEEEESCCTT
T ss_pred             HHHHhCCCceEEEECCCch---------HHHHHHHHHhcC--CEEEEEecCC
Confidence            3333322499999999831         124455555443  5899988653

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.64  E-value=0.00028  Score=60.81  Aligned_cols=105  Identities=17%  Similarity=0.196  Sum_probs=66.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhh----cccC---CCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----TLSK---DNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      |++++|.|+|+ |.+|..++..|+..|. +|+++++++++...    +...   ......+...  .|     .+++++ 
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d-----~~a~~~-   73 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--ND-----YKDLEN-   73 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC-----GGGGTT-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CC-----HHHHCC-
Confidence            34679999995 9999999999999887 99999999876532    1110   0012222211  12     245778 


Q ss_pred             CCEEEEcCCCCCCCCCcch----hHH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          136 SEAVVCATGFQPGWDLFAP----WKA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~~~----~~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      +|+||.++|..........    .+.   +.+++.+.+.... .+|.+|.
T Consensus        74 aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           74 SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            9999999997654322111    111   7777777776633 5665543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.63  E-value=0.00035  Score=63.43  Aligned_cols=100  Identities=17%  Similarity=0.314  Sum_probs=73.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~a  143 (296)
                      .-++|+|.|| |-+|..+|+.| +++++|.++.+++++...+.. ..++..++.+|.+| .+-+.++ +.. .|++|...
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~-~l~~~~Vi~GD~td-~~~L~ee~i~~-~D~~ia~T  308 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSE-ELENTIVFCGDAAD-QELLTEENIDQ-VDVFIALT  308 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHH-HCTTSEEEESCTTC-HHHHHHTTGGG-CSEEEECC
T ss_pred             cccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHH-HCCCceEEeccccc-hhhHhhcCchh-hcEEEEcc
Confidence            3578999996 99999999987 556899999999887765433 23678999999999 7877764 555 99999876


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +-        +....-+.-.|++.|++++|-.-.
T Consensus       309 ~~--------De~Ni~~~llAk~~gv~kvIa~vn  334 (461)
T 4g65_A          309 NE--------DETNIMSAMLAKRMGAKKVMVLIQ  334 (461)
T ss_dssp             SC--------HHHHHHHHHHHHHTTCSEEEEECS
T ss_pred             cC--------cHHHHHHHHHHHHcCCcccccccc
Confidence            52        121233344567889888876443

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.62  E-value=0.00017  Score=58.55  Aligned_cols=65  Identities=22%  Similarity=0.376  Sum_probs=50.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      +++|.|+| +|.+|..+++.|.+.|++|++.+|++++......   .++...     +    +.+++.+ +|+||.+..
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~---~g~~~~-----~----~~~~~~~-~DvVi~av~   92 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP---SAAQVT-----F----QEEAVSS-PEVIFVAVF   92 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB---TTSEEE-----E----HHHHTTS-CSEEEECSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---cCCcee-----c----HHHHHhC-CCEEEECCC
Confidence            57899999 7999999999999999999999999877665442   234332     2    3445677 999998875

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.61  E-value=0.0003  Score=60.49  Aligned_cols=105  Identities=20%  Similarity=0.222  Sum_probs=64.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCc--chhhhc----ccC---CCCCeEEEEcccCCChHHHHHHhc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL--DKAKTT----LSK---DNPSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~----~~~---~~~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      ++.++|.|+|+ |.+|..++..|+..|. +|+++++++  ++.+..    ...   ......+...  .|     .+.++
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d-----~~a~~   77 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SD-----YADTA   77 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SC-----GGGGT
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CC-----HHHhC
Confidence            34679999996 9999999999999998 999999983  333211    100   0011111111  12     23467


Q ss_pred             CCCCEEEEcCCCCCCCCCcchh----HH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          134 DDSEAVVCATGFQPGWDLFAPW----KA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      + +|+||.++|...........    +.   +.+.+.+.+.+.. .++.+|.
T Consensus        78 ~-aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           78 D-SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             T-CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             C-CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            7 99999999976543221111    11   7777777776533 5665553

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.60  E-value=0.00041  Score=60.63  Aligned_cols=98  Identities=17%  Similarity=0.143  Sum_probs=64.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccC---CChHHHHHHhc---C-CCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT---EGSAKLSEAIG---D-DSE  137 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~---d~~~~~~~~~~---~-~~d  137 (296)
                      .+++|||+|+ |.+|...++.+...|++|+++++++++.+.... .... .++  |..   +..+.+.+...   + .+|
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~-~~~--~~~~~~~~~~~i~~~~~~~~g~g~D  242 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGAD-VTL--VVDPAKEEESSIIERIRSAIGDLPN  242 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCS-EEE--ECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hCCC-EEE--cCcccccHHHHHHHHhccccCCCCC
Confidence            4789999997 999999999888899999999998876553322 1122 222  333   21345655553   1 399


Q ss_pred             EEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          138 AVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +||.++|..        ......++.++..  +++|.++.
T Consensus       243 ~vid~~g~~--------~~~~~~~~~l~~~--G~iv~~G~  272 (352)
T 1e3j_A          243 VTIDCSGNE--------KCITIGINITRTG--GTLMLVGM  272 (352)
T ss_dssp             EEEECSCCH--------HHHHHHHHHSCTT--CEEEECSC
T ss_pred             EEEECCCCH--------HHHHHHHHHHhcC--CEEEEEec
Confidence            999999731        1123445555443  48988765

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.60  E-value=0.00027  Score=62.07  Aligned_cols=100  Identities=16%  Similarity=0.183  Sum_probs=65.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH----HHHHhcC-CCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK----LSEAIGD-DSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~----~~~~~~~-~~d~  138 (296)
                      .+.+|||+|+ |.+|...++.+...|++ |+++++++++.+..... ...+..+..|-.+ .+.    +.+...+ .+|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~-~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLS-AEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCC-HHHHHHHHHHHTSSCCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccc-hHHHHHHHHHHhCCCCCCE
Confidence            4789999998 99999999988889987 88888888776543321 2334344444333 333    3333332 4999


Q ss_pred             EEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          139 VVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ||.++|..        ......++.++..  +++|.++.
T Consensus       256 vid~~g~~--------~~~~~~~~~l~~~--G~iv~~G~  284 (363)
T 3m6i_A          256 ALECTGVE--------SSIAAAIWAVKFG--GKVFVIGV  284 (363)
T ss_dssp             EEECSCCH--------HHHHHHHHHSCTT--CEEEECCC
T ss_pred             EEECCCCh--------HHHHHHHHHhcCC--CEEEEEcc
Confidence            99998732        1123455555444  58998765

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.58  E-value=0.00014  Score=63.43  Aligned_cols=98  Identities=13%  Similarity=0.084  Sum_probs=63.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~a  143 (296)
                      .+++|||+||+|.+|..+++.+...|++|+++ +++++.+....   -++..+. +-.+..+.+.+...+ .+|++|.|+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~---lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~  224 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD---LGATPID-ASREPEDYAAEHTAGQGFDLVYDTL  224 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH---HTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH---cCCCEec-cCCCHHHHHHHHhcCCCceEEEECC
Confidence            47899999999999999999999999999998 77666543321   2334322 222212334444432 499999999


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |..         .....++.++..  +++|.++..
T Consensus       225 g~~---------~~~~~~~~l~~~--G~iv~~g~~  248 (343)
T 3gaz_A          225 GGP---------VLDASFSAVKRF--GHVVSCLGW  248 (343)
T ss_dssp             CTH---------HHHHHHHHEEEE--EEEEESCCC
T ss_pred             CcH---------HHHHHHHHHhcC--CeEEEEccc
Confidence            831         124455555444  488887654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.56  E-value=0.00053  Score=59.27  Aligned_cols=104  Identities=18%  Similarity=0.167  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhh----cccC--CCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKT----TLSK--DNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      ..++|.|+|+ |.+|..++..|+.+|.  +|++++++.++++.    +...  .......+..  .| .    +.+++ +
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d-~----~~~~~-a   88 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KD-Y----SVTAN-S   88 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SS-G----GGGTT-E
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CC-H----HHhCC-C
Confidence            4689999997 9999999999999986  89999998765442    1110  0111122221  13 2    23777 9


Q ss_pred             CEEEEcCCCCCCCCC--cc--hhHH---HHHHHHHHHcCC-CEEEEEcc
Q 022495          137 EAVVCATGFQPGWDL--FA--PWKA---INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~~--~~--~~~~---~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      |+||.+||.......  .+  ..+.   +.+.+.+.+... ..++.+|.
T Consensus        89 DiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           89 KLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             EEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999997653221  11  1111   777777777753 36666654

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.56  E-value=0.00013  Score=63.69  Aligned_cols=96  Identities=14%  Similarity=0.139  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEE-EEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQI-VKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +++|.|.||+|.+|+.+++.|.++. .+++.+.+..+...+ +....+.+.- ....+.+ .+   + +.+ +|+||.|+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~-~~~~~~~~~g~~~~~~~~-~~---~-~~~-vDvV~~a~   76 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEP-VHFVHPNLRGRTNLKFVP-PE---K-LEP-ADILVLAL   76 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSB-GGGTCGGGTTTCCCBCBC-GG---G-CCC-CSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCch-hHHhCchhcCcccccccc-hh---H-hcC-CCEEEEcC
Confidence            4789999999999999999999875 477777654322111 1100010000 0112333 33   2 567 99999998


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |...         ...+++.+.+.|+ ++|-.|+.
T Consensus        77 g~~~---------s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           77 PHGV---------FAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             CTTH---------HHHTHHHHHTTCS-EEEECSST
T ss_pred             CcHH---------HHHHHHHHHHCCC-EEEEcCcc
Confidence            7431         1456677777786 68888875

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.55  E-value=0.00018  Score=63.06  Aligned_cols=98  Identities=17%  Similarity=0.107  Sum_probs=66.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+.+|+|+|+ |.+|...++.+...|++|+++++++++.+......  +.+. ..|..+ .+.+.+...+ +|+||.++|
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l--Ga~~-vi~~~~-~~~~~~~~~g-~D~vid~~g  253 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL--GADD-YVIGSD-QAKMSELADS-LDYVIDTVP  253 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS--CCSC-EEETTC-HHHHHHSTTT-EEEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc--CCce-eecccc-HHHHHHhcCC-CCEEEECCC
Confidence            5789999995 99999999988888999999999887765433111  2221 135556 5666666666 999999998


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .....        ...++.++..  +++|.++..
T Consensus       254 ~~~~~--------~~~~~~l~~~--G~iv~~G~~  277 (357)
T 2cf5_A          254 VHHAL--------EPYLSLLKLD--GKLILMGVI  277 (357)
T ss_dssp             SCCCS--------HHHHTTEEEE--EEEEECSCC
T ss_pred             ChHHH--------HHHHHHhccC--CEEEEeCCC
Confidence            43211        2344444443  488887764

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.54  E-value=0.00011  Score=63.42  Aligned_cols=100  Identities=11%  Similarity=0.032  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhh----cccC--CCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKT----TLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      .++|.|+|+ |++|..++..|+..|.  +|+++++++++++.    +...  ....+++..   .+     .+++++ +|
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~-----~~a~~~-aD   76 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD-----YSDVKD-CD   76 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----GGGGTT-CS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC-----HHHhCC-CC
Confidence            468999998 9999999999999986  89999998765432    1110  011222221   12     334788 99


Q ss_pred             EEEEcCCCCCCCCCcc----hhHH---HHHHHHHHHcCCC-EEEEE
Q 022495          138 AVVCATGFQPGWDLFA----PWKA---INLVEACRKRGVN-RFILI  175 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~----~~~~---~~~l~~~~~~~~~-~iV~~  175 (296)
                      +||.++|.........    ..+.   +.+++.+.+.... .+|.+
T Consensus        77 vVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           77 VIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             EEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             EEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            9999999754322111    1111   7777777776533 44443

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.53  E-value=0.00018  Score=63.30  Aligned_cols=95  Identities=18%  Similarity=0.226  Sum_probs=63.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc---chhhhcccCCCCCeEEEEcccC-CChHHHHHHhcCCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL---DKAKTTLSKDNPSLQIVKADVT-EGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~~~d~vv~  141 (296)
                      +++|+|+|| |++|..+++.+...|++|+++++++   ++.+....   -+++.+  | . +..+.+.+.-.+ +|+||+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~---~ga~~v--~-~~~~~~~~~~~~~~-~d~vid  252 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE---TKTNYY--N-SSNGYDKLKDSVGK-FDVIID  252 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH---HTCEEE--E-CTTCSHHHHHHHCC-EEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH---hCCcee--c-hHHHHHHHHHhCCC-CCEEEE
Confidence            899999999 9999999999999999999999987   66543221   234444  4 3 212344432245 999999


Q ss_pred             cCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ++|...        .. ...++.++..  +++|.++..
T Consensus       253 ~~g~~~--------~~~~~~~~~l~~~--G~iv~~g~~  280 (366)
T 2cdc_A          253 ATGADV--------NILGNVIPLLGRN--GVLGLFGFS  280 (366)
T ss_dssp             CCCCCT--------HHHHHHGGGEEEE--EEEEECSCC
T ss_pred             CCCChH--------HHHHHHHHHHhcC--CEEEEEecC
Confidence            998521        11 2333444333  488888764

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.51  E-value=0.00086  Score=57.02  Aligned_cols=102  Identities=15%  Similarity=0.092  Sum_probs=65.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhh----ccc---CCCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKT----TLS---KDNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++++++++++.    +..   .......+...  .|     .+++++ .|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d-----~~a~~~-aD   71 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD-----YSLLKG-SE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC-----GGGGTT-CS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC-----HHHhCC-CC
Confidence            58999998 9999999999999987  89999999876531    100   01112222211  11     345778 99


Q ss_pred             EEEEcCCCCCCCCCcch----hHH---HHHHHHHHHcCC-CEEEEEcc
Q 022495          138 AVVCATGFQPGWDLFAP----WKA---INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~----~~~---~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      +||.++|..........    .+.   +.+++.+.+.+. ..++.+|.
T Consensus        72 iVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           72 IIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            99999997654322111    111   777777777753 35666554

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.51  E-value=0.00021  Score=62.26  Aligned_cols=98  Identities=12%  Similarity=0.050  Sum_probs=64.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv~  141 (296)
                      .+.+|||+|| |.+|..+++.+...|+ +|+++++++++.+.... .   ... ..|..+.  .+.+.+...+.+|+||.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l---a~~-v~~~~~~~~~~~~~~~~~~g~D~vid  237 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y---ADR-LVNPLEEDLLEVVRRVTGSGVEVLLE  237 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T---CSE-EECTTTSCHHHHHHHHHSSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---HHh-ccCcCccCHHHHHHHhcCCCCCEEEE
Confidence            5789999999 9999999999888998 99999998877654332 1   221 2354441  12233322213999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ++|..        ......++.++..  +++|.++..
T Consensus       238 ~~g~~--------~~~~~~~~~l~~~--G~iv~~g~~  264 (343)
T 2dq4_A          238 FSGNE--------AAIHQGLMALIPG--GEARILGIP  264 (343)
T ss_dssp             CSCCH--------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             CCCCH--------HHHHHHHHHHhcC--CEEEEEecC
Confidence            99831        1124455555544  488888763

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.50  E-value=0.00049  Score=57.66  Aligned_cols=65  Identities=17%  Similarity=0.133  Sum_probs=49.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +++++|+|+ |+.|+.++..|.+.|.+|++..|++++..++.. .  ++..+  ++.+ .       .+ .|+||++...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~-~--~~~~~--~~~~-l-------~~-~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQR-L--GCDCF--MEPP-K-------SA-FDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHH-H--TCEEE--SSCC-S-------SC-CSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-C--CCeEe--cHHH-h-------cc-CCEEEEcccC
Confidence            789999996 999999999999999999999999988765541 1  12222  3333 1       25 8999998654

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.50  E-value=0.00032  Score=58.96  Aligned_cols=37  Identities=30%  Similarity=0.433  Sum_probs=29.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEE-EcCc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAG-VRDL  100 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~-~r~~  100 (296)
                      |++++|.|+|++|.+|+.+++.+.+. +.++++. +|+.
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            45689999999999999999999876 5777764 5554

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.49  E-value=0.00079  Score=57.17  Aligned_cols=101  Identities=17%  Similarity=0.101  Sum_probs=63.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhh----ccc---CCCCCeEEEE-cccCCChHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKT----TLS---KDNPSLQIVK-ADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~---~~~~~~~~~~-~D~~d~~~~~~~~~~~~~  136 (296)
                      |||.|+|+ |+||+.++..|+.++  .++++++.+++..+.    +..   .......... .|.        +.+++ .
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~--------~~~~~-a   70 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY--------SLLKG-S   70 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG--------GGGTT-C
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH--------HHhCC-C
Confidence            68999995 999999999999887  478888888754331    110   0111222222 232        23677 9


Q ss_pred             CEEEEcCCCCCCCCCcchh----HH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          137 EAVVCATGFQPGWDLFAPW----KA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      |+||-.||..+........    +.   +.+.+.+.+.+.+ .++.+|.
T Consensus        71 DvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           71 EIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             SEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            9999999976643322111    11   7788888877644 4555544

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.49  E-value=5.7e-05  Score=65.18  Aligned_cols=102  Identities=15%  Similarity=0.152  Sum_probs=63.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhc----c---cCCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTT----L---SKDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----~---~~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      +.++|.|+|| |.+|..++..|+.+|  .+|+++++++++++..    .   ......+.+.. |  +     .+++++ 
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~-----~~a~~~-   74 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E-----YSDCHD-   74 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C-----GGGGTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C-----HHHhCC-
Confidence            4579999998 999999999999888  4799888887544321    0   00112333332 2  2     334778 


Q ss_pred             CCEEEEcCCCCCCCCCcc----hhHH---HHHHHHHHHcCCC-EEEEEc
Q 022495          136 SEAVVCATGFQPGWDLFA----PWKA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~~----~~~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      +|+||.++|.........    ..+.   +.+.+.+.+.... .+|.+|
T Consensus        75 aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           75 ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999999999765432211    1111   7777777777533 455443

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.48  E-value=0.00018  Score=62.81  Aligned_cols=99  Identities=14%  Similarity=0.154  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC-hHHHHHHhcCCCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~d~vv~~a  143 (296)
                      .+++|+|+||+|.+|...++.+...|++|+++++++++.+....   -+...+ .|..+. .+.+.+.-.+.+|+||+|+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~---lGa~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~  225 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK---MGADIV-LNHKESLLNQFKTQGIELVDYVFCTF  225 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH---HTCSEE-ECTTSCHHHHHHHHTCCCEEEEEESS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---cCCcEE-EECCccHHHHHHHhCCCCccEEEECC
Confidence            47899999999999999999999999999999998876554332   112211 233221 2344444221499999998


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |..        ......++.++..  +++|.+++
T Consensus       226 g~~--------~~~~~~~~~l~~~--G~iv~~~~  249 (346)
T 3fbg_A          226 NTD--------MYYDDMIQLVKPR--GHIATIVA  249 (346)
T ss_dssp             CHH--------HHHHHHHHHEEEE--EEEEESSC
T ss_pred             Cch--------HHHHHHHHHhccC--CEEEEECC
Confidence            731        1113445555444  48887654

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.47  E-value=0.0006  Score=56.67  Aligned_cols=104  Identities=18%  Similarity=0.261  Sum_probs=65.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcch-------------------hhhc---ccCCCCC--eEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDK-------------------AKTT---LSKDNPS--LQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~---~~~~~~~--~~~~  117 (296)
                      .+++++|+|.|+ |++|+++++.|+..|. ++++++++.-.                   ....   +...++.  ++.+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            456789999997 8899999999999996 67777665311                   1100   0001233  4444


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ..++.  .+.+.+.+++ +|+||.+...        ......+.+++.+.++ .+|..+...
T Consensus       104 ~~~~~--~~~~~~~~~~-~DvVi~~~d~--------~~~r~~l~~~~~~~~~-p~i~~~~~g  153 (251)
T 1zud_1          104 QQRLT--GEALKDAVAR-ADVVLDCTDN--------MATRQEINAACVALNT-PLITASAVG  153 (251)
T ss_dssp             CSCCC--HHHHHHHHHH-CSEEEECCSS--------HHHHHHHHHHHHHTTC-CEEEEEEEB
T ss_pred             eccCC--HHHHHHHHhc-CCEEEECCCC--------HHHHHHHHHHHHHhCC-CEEEEeccc
Confidence            44444  3567777888 9999988531        1112456667777775 577765543

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.47  E-value=0.0009  Score=56.72  Aligned_cols=103  Identities=15%  Similarity=0.204  Sum_probs=66.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCc------------------chhhh---cccC--CCCCeEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL------------------DKAKT---TLSK--DNPSLQIVK  118 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~------------------~~~~~---~~~~--~~~~~~~~~  118 (296)
                      .+++.+|+|.|+ |++|+.+++.|+..|. +++++|++.                  .+...   .+..  ...+++.+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            456789999996 9999999999999994 788877764                  11111   0111  223456666


Q ss_pred             cccCCChHHHHHHh-----------cCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          119 ADVTEGSAKLSEAI-----------GDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       119 ~D~~d~~~~~~~~~-----------~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      .++++ .+.+.+.+           ++ +|+||.+...        ......+-++|.+.++ .+|+.+.
T Consensus       112 ~~l~~-~~~~~~~~~~~~~~~l~~~~~-~DlVid~~Dn--------~~~R~~in~~c~~~~~-Pli~~gv  170 (292)
T 3h8v_A          112 YNITT-VENFQHFMDRISNGGLEEGKP-VDLVLSCVDN--------FEARMTINTACNELGQ-TWMESGV  170 (292)
T ss_dssp             CCTTS-HHHHHHHHHHHHHBSSSTTBC-CSEEEECCSS--------HHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred             ccCCc-HHHHHHHhhhhcccccccCCC-CCEEEECCcc--------hhhhhHHHHHHHHhCC-CEEEeee
Confidence            67766 56666554           56 9999987621        1111556677787775 5665443

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.46  E-value=0.00027  Score=62.01  Aligned_cols=103  Identities=13%  Similarity=0.084  Sum_probs=69.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEccc------------------CCChH
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADV------------------TEGSA  126 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~------------------~d~~~  126 (296)
                      .+.+|+|+|+ |-+|...++.|...|.+|++.+|++.+.+....   -+.+++..|+                  .+ .+
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~---lGa~~~~l~~~~~~~~gya~~~~~~~~~~~-~~  257 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS---VGAQWLDLGIDAAGEGGYARELSEAERAQQ-QQ  257 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH---TTCEECCCC-------------CHHHHHHH-HH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---cCCeEEeccccccccccchhhhhHHHHhhh-HH
Confidence            5689999997 999999999999999999999999887654432   2344443221                  11 34


Q ss_pred             HHHHHhcCCCCEEEEcCCCCCCCCC-cchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          127 KLSEAIGDDSEAVVCATGFQPGWDL-FAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       127 ~~~~~~~~~~d~vv~~ag~~~~~~~-~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .+.+.+++ .|+||.++.......+ ...   ...++.|+..  .-||-+|.-
T Consensus       258 ~l~e~l~~-aDIVI~tv~iPg~~ap~Lvt---~emv~~MkpG--sVIVDvA~d  304 (381)
T 3p2y_A          258 ALEDAITK-FDIVITTALVPGRPAPRLVT---AAAATGMQPG--SVVVDLAGE  304 (381)
T ss_dssp             HHHHHHTT-CSEEEECCCCTTSCCCCCBC---HHHHHTSCTT--CEEEETTGG
T ss_pred             HHHHHHhc-CCEEEECCCCCCcccceeec---HHHHhcCCCC--cEEEEEeCC
Confidence            67778888 9999998765432221 111   4566666642  256666654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.46  E-value=0.0013  Score=56.38  Aligned_cols=104  Identities=16%  Similarity=0.104  Sum_probs=63.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC-C--CeEEEEEcCcchhh----hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK-G--FAVKAGVRDLDKAK----TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      |||.|+||+|.+|..++..|.++ +  .+++++++++ +.+    ++.. ......+....-++    ..+.+++ +|+|
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~-~~~~~~v~~~~~~~----~~~~~~~-aDiv   73 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSH-IPTAVKIKGFSGED----ATPALEG-ADVV   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHT-SCSSEEEEEECSSC----CHHHHTT-CSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhC-CCCCceEEEecCCC----cHHHhCC-CCEE
Confidence            58999999999999999999876 5  5788888876 221    1211 11122221110012    2455778 9999


Q ss_pred             EEcCCCCCCCCCcch----hHH---HHHHHHHHHcCC-CEEEEEcc
Q 022495          140 VCATGFQPGWDLFAP----WKA---INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       140 v~~ag~~~~~~~~~~----~~~---~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      |.+||..........    .+.   +.+.+.+.+... ..++.+|.
T Consensus        74 ii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           74 LISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             EECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            999997654321111    111   777777777653 35666653

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.46  E-value=0.00067  Score=58.26  Aligned_cols=102  Identities=13%  Similarity=0.146  Sum_probs=62.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhc----ccC---CCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTT----LSK---DNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++++++++++..    ...   ......+...|  +     .+.+++ +|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~-----~~a~~~-aD   71 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D-----YGPTED-SD   71 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S-----SGGGTT-CS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C-----HHHhCC-CC
Confidence            58999996 9999999999999886  899999988764421    100   01123332111  2     234677 99


Q ss_pred             EEEEcCCCCCCCCCcc----hhHH---HHHHHHHHHcCC-CEEEEEcc
Q 022495          138 AVVCATGFQPGWDLFA----PWKA---INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~----~~~~---~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      +||.++|.........    ..+.   +.+.+.+.+... ..++.+|.
T Consensus        72 vVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           72 VCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            9999999764322111    1111   777777777753 35555553

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.45  E-value=0.00019  Score=62.88  Aligned_cols=95  Identities=21%  Similarity=0.158  Sum_probs=63.3

Q ss_pred             CeEEEEcCCchHHHHH-HHHH-HHCCCe-EEEEEcCcc---hhhhcccCCCCCeEEEEcccCCC-hHHHHHHhcCCCCEE
Q 022495           67 KKIFVAGATGSSGKRI-VEQL-LAKGFA-VKAGVRDLD---KAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGDDSEAV  139 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l-~~~L-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~d~v  139 (296)
                      .+|+|+|| |.+|... ++.+ ...|.+ |++++++++   +.+....   -+++.+  |..+. ...+.+. .+.+|+|
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~---lGa~~v--~~~~~~~~~i~~~-~gg~Dvv  246 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE---LDATYV--DSRQTPVEDVPDV-YEQMDFI  246 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH---TTCEEE--ETTTSCGGGHHHH-SCCEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH---cCCccc--CCCccCHHHHHHh-CCCCCEE
Confidence            89999999 9999999 8877 677987 999999887   6553322   345555  66541 1114444 3249999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |.++|..        ......++.++..  +++|.++..
T Consensus       247 id~~g~~--------~~~~~~~~~l~~~--G~iv~~g~~  275 (357)
T 2b5w_A          247 YEATGFP--------KHAIQSVQALAPN--GVGALLGVP  275 (357)
T ss_dssp             EECSCCH--------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             EECCCCh--------HHHHHHHHHHhcC--CEEEEEeCC
Confidence            9998731        1124455555544  488888764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.43  E-value=0.00049  Score=60.67  Aligned_cols=74  Identities=15%  Similarity=0.106  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHh--cCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI--GDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~~~d~vv~~  142 (296)
                      .+++|+|+||+|.+|..+++.+...|++|+++++ +++.+.... .  +... ..|..+ .+..+++.  .+ +|+||.|
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~-l--Ga~~-v~~~~~-~~~~~~~~~~~g-~D~vid~  255 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRK-L--GADD-VIDYKS-GSVEEQLKSLKP-FDFILDN  255 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHH-T--TCSE-EEETTS-SCHHHHHHTSCC-BSEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHH-c--CCCE-EEECCc-hHHHHHHhhcCC-CCEEEEC
Confidence            4689999999999999999999899999998874 444432221 1  2222 135554 33333322  45 9999999


Q ss_pred             CCC
Q 022495          143 TGF  145 (296)
Q Consensus       143 ag~  145 (296)
                      +|.
T Consensus       256 ~g~  258 (375)
T 2vn8_A          256 VGG  258 (375)
T ss_dssp             SCT
T ss_pred             CCC
Confidence            984

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.42  E-value=8.9e-05  Score=62.47  Aligned_cols=36  Identities=28%  Similarity=0.518  Sum_probs=28.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHH-CCCeEEEE-EcCc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLA-KGFAVKAG-VRDL  100 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~-~r~~  100 (296)
                      ++++|+|+|++|.+|+.+++.+.+ .|+++++. ++++
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~   41 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG   41 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence            457999999999999999999885 47887744 4444

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.42  E-value=0.00017  Score=64.37  Aligned_cols=74  Identities=27%  Similarity=0.395  Sum_probs=54.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++.+++|+|+|+ |.+|..+++.|...|. +|++.+|++++..++...  -+...  .   + .+.+.+.+.+ +|+||.
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~--~g~~~--~---~-~~~l~~~l~~-aDvVi~  233 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD--LGGEA--V---R-FDELVDHLAR-SDVVVS  233 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH--HTCEE--C---C-GGGHHHHHHT-CSEEEE
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH--cCCce--e---c-HHhHHHHhcC-CCEEEE
Confidence            467899999997 9999999999999998 899999998765432210  12222  1   2 2345666677 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +.+..
T Consensus       234 at~~~  238 (404)
T 1gpj_A          234 ATAAP  238 (404)
T ss_dssp             CCSSS
T ss_pred             ccCCC
Confidence            98643

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.42  E-value=0.0012  Score=56.99  Aligned_cols=102  Identities=20%  Similarity=0.054  Sum_probs=65.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhc----cc--CCCCCeEEE-EcccCCChHHHHHHhcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTT----LS--KDNPSLQIV-KADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~--~~~~~~~~~-~~D~~d~~~~~~~~~~~~~  136 (296)
                      .++|.|+|+ |.+|..++..|+..|.  +|+++++++++.+..    ..  .......++ ..|+.+        +++ +
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~--------~~d-a   90 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV--------SAG-S   90 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS--------CSS-C
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH--------hCC-C
Confidence            579999998 9999999999999986  899999987654321    10  001112222 234332        677 9


Q ss_pred             CEEEEcCCCCCCCCC----cchhHH---HHHHHHHHHcCC-CEEEEEcc
Q 022495          137 EAVVCATGFQPGWDL----FAPWKA---INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~~---~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      |+||-+||.......    ....+.   +.+++.+.+.+. ..++.+|.
T Consensus        91 DiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           91 KLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             SEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            999999997643221    112222   677777777653 35666554

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.41  E-value=0.00032  Score=63.48  Aligned_cols=77  Identities=19%  Similarity=0.230  Sum_probs=51.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCC----CCeEE-E-----EcccCCChHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN----PSLQI-V-----KADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~-~-----~~D~~d~~~~~~~~~~~~~  136 (296)
                      |+|.|+|+ |++|..++..|++.|++|++++|++++...+.....    +++.- +     .+.+.- ..+..+++++ +
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~~~-a   79 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAVPE-A   79 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHGGG-C
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHHhc-C
Confidence            68999985 999999999999999999999999887665442111    11100 0     011111 1224556677 9


Q ss_pred             CEEEEcCCCC
Q 022495          137 EAVVCATGFQ  146 (296)
Q Consensus       137 d~vv~~ag~~  146 (296)
                      |+||.+.+..
T Consensus        80 DvViiaVptp   89 (450)
T 3gg2_A           80 DIIFIAVGTP   89 (450)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEEEcCCC
Confidence            9999998754

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.41  E-value=0.00048  Score=58.87  Aligned_cols=73  Identities=21%  Similarity=0.277  Sum_probs=55.1

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+++++|+|+ |.+|+.+++.|...|.+|++.+|++++......   .++..+     + .+++.+.+.+ +|+|+.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~---~g~~~~-----~-~~~l~~~l~~-aDvVi~  221 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE---MGLVPF-----H-TDELKEHVKD-IDICIN  221 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCEEE-----E-GGGHHHHSTT-CSEEEE
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CCCeEE-----c-hhhHHHHhhC-CCEEEE
Confidence            3578899999996 999999999999999999999999876543221   123322     2 2346677788 999999


Q ss_pred             cCCC
Q 022495          142 ATGF  145 (296)
Q Consensus       142 ~ag~  145 (296)
                      +...
T Consensus       222 ~~p~  225 (300)
T 2rir_A          222 TIPS  225 (300)
T ss_dssp             CCSS
T ss_pred             CCCh
Confidence            8764

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.40  E-value=0.0028  Score=55.86  Aligned_cols=69  Identities=19%  Similarity=0.203  Sum_probs=53.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ||+|+|+|+ |.+|+.+++.|.+.|++|++++.++.......    . -.++..|..| .+.+.++..+ +|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~----~-~~~~~~~~~d-~~~l~~~~~~-~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV----A-DEQIVAGFFD-SERIEDLVKG-SDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG----S-SEEEECCTTC-HHHHHHHHHT-CSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh----C-ceEEECCCCC-HHHHHHHHhc-CCEEEec
Confidence            368999996 89999999999999999999887654321111    1 1356789999 8888888877 9998853

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.39  E-value=0.00053  Score=58.39  Aligned_cols=94  Identities=17%  Similarity=0.239  Sum_probs=64.1

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++++|+|+ |.+|+.+++.|...|.+|++.+|++++......   .++.++     + .+.+.+.+.+ +|+|+.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~---~g~~~~-----~-~~~l~~~l~~-aDvVi~~  220 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAE---MGMEPF-----H-ISKAAQELRD-VDVCINT  220 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTSEEE-----E-GGGHHHHTTT-CSEEEEC
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH---CCCeec-----C-hhhHHHHhcC-CCEEEEC
Confidence            578999999995 999999999999999999999998866443221   233332     2 2346677888 9999998


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +..    . ...   ...++.++..  ..+|.++.
T Consensus       221 ~p~----~-~i~---~~~l~~mk~~--~~lin~ar  245 (293)
T 3d4o_A          221 IPA----L-VVT---ANVLAEMPSH--TFVIDLAS  245 (293)
T ss_dssp             CSS----C-CBC---HHHHHHSCTT--CEEEECSS
T ss_pred             CCh----H-HhC---HHHHHhcCCC--CEEEEecC
Confidence            753    1 111   2344444432  36777765

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.39  E-value=0.00032  Score=60.99  Aligned_cols=93  Identities=22%  Similarity=0.244  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC---eEEEEE-cCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGV-RDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +++|+|.||+|.+|+.+++.|.++++   +++++. +......-.+    .+......|. | .+    .+++ +|+||.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~----~g~~i~~~~~-~-~~----~~~~-~DvV~~   74 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGF----AESSLRVGDV-D-SF----DFSS-VGLAFF   74 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEE----TTEEEECEEG-G-GC----CGGG-CSEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCcccc----CCcceEEecC-C-HH----HhcC-CCEEEE
Confidence            36899999999999999999997764   455554 2211100001    1111111122 2 11    2567 999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      |.|..         ....+++.+.+.|+ ++|.+|+..
T Consensus        75 a~g~~---------~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           75 AAAAE---------VSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             CSCHH---------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             cCCcH---------HHHHHHHHHHHCCC-EEEEeCCCC
Confidence            98732         12567788888887 577777764

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.39  E-value=0.00019  Score=62.34  Aligned_cols=108  Identities=17%  Similarity=0.117  Sum_probs=63.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcCcchh--h----hcccCCCCCeEEEEcccCCChHHHHH
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDKA--K----TTLSKDNPSLQIVKADVTEGSAKLSE  130 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~----~~~~~~~~~~~~~~~D~~d~~~~~~~  130 (296)
                      ++..||.|+||+|+||+.++-.|.+...       ++.+++..+...  +    ++.....+...-+  .+.+   ...+
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~--~~~~---~~~~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKV--VVTA---DPRV   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEE--EEES---CHHH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcE--EEcC---ChHH
Confidence            3456999999999999999998887532       678778765321  1    1111111111111  1111   1356


Q ss_pred             HhcCCCCEEEEcCCCCCCCCCcchh----HH---HHHHHHHHHcC-CC-EEEEEcc
Q 022495          131 AIGDDSEAVVCATGFQPGWDLFAPW----KA---INLVEACRKRG-VN-RFILISS  177 (296)
Q Consensus       131 ~~~~~~d~vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~-~~-~iV~~SS  177 (296)
                      ++++ +|+||-+||..+........    +.   +.+.+.+.+.. .. .++.+|.
T Consensus        97 a~~~-advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           97 AFDG-VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             HTTT-CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             HhCC-CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            7888 99999999976543322111    11   77777776653 22 4555554

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.39  E-value=0.00026  Score=64.23  Aligned_cols=99  Identities=20%  Similarity=0.174  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC------------h-------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG------------S-------  125 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~------------~-------  125 (296)
                      .+.+|+|+||+|.+|...++.+...|++|+++++++++.+....   -++..+ .|..+.            .       
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~---lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA---MGAEAI-IDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HTCCEE-EETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh---hCCcEE-EecCcCcccccccccccchHHHHHHH
Confidence            46899999999999999999999999999999988776654322   112111 122210            1       


Q ss_pred             HHHHHHhcC-CCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          126 AKLSEAIGD-DSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       126 ~~~~~~~~~-~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +.+.+...+ .+|+||.++|.         ......++.++..  +++|.+++.
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G~---------~~~~~~~~~l~~~--G~iv~~G~~  346 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPGR---------ETFGASVFVTRKG--GTITTCAST  346 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSCH---------HHHHHHHHHEEEE--EEEEESCCT
T ss_pred             HHHHHHhCCCCCcEEEEcCCc---------hhHHHHHHHhhCC--cEEEEEecC
Confidence            344454442 49999999983         1124455554444  488888765

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.38  E-value=0.0013  Score=54.39  Aligned_cols=100  Identities=19%  Similarity=0.221  Sum_probs=63.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH----hcCCCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA----IGDDSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~----~~~~~d~vv~  141 (296)
                      ++|+|+|++|.+|+.+++.+.+. |++|++..+..+...+.+.   .+.. +..|++. ++...+.    ++...++|+-
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~~~D-vvIDfT~-p~a~~~~~~~a~~~g~~~Vig   75 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---GNTE-VVIDFTH-PDVVMGNLEFLIDNGIHAVVG   75 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---TTCC-EEEECSC-TTTHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---cCCc-EEEEccC-hHHHHHHHHHHHHcCCCEEEc
Confidence            47999999999999999999876 8998877655444443332   1233 5678887 4444432    3223888887


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHc-CCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKR-GVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~~SS~~  179 (296)
                      ..|+..       .....+.+++++. ++ .+++.+.++
T Consensus        76 TTG~~~-------e~~~~l~~aa~~~~~~-~vv~a~N~s  106 (245)
T 1p9l_A           76 TTGFTA-------ERFQQVESWLVAKPNT-SVLIAPNFA  106 (245)
T ss_dssp             CCCCCH-------HHHHHHHHHHHTSTTC-EEEECSCCC
T ss_pred             CCCCCH-------HHHHHHHHHHHhCCCC-CEEEECCcc
Confidence            766321       1123455555555 44 677777754

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.36  E-value=0.00042  Score=60.21  Aligned_cols=98  Identities=17%  Similarity=0.151  Sum_probs=64.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|||+|+ |.+|...++.+...|++|+++++++++.+.... .  +...+ .|..+.  .+.+.+...+ +|++|.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l--Ga~~~-i~~~~~~~~~~~~~~~g~-~d~vid~  239 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-L--GAEVA-VNARDTDPAAWLQKEIGG-AHGVLVT  239 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T--TCSEE-EETTTSCHHHHHHHHHSS-EEEEEES
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-c--CCCEE-EeCCCcCHHHHHHHhCCC-CCEEEEe
Confidence            4789999997 899999999998899999999998877654332 1  22221 244441  2334443456 9999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +|..        ......++.++..  ++++.++..
T Consensus       240 ~g~~--------~~~~~~~~~l~~~--G~iv~~G~~  265 (340)
T 3s2e_A          240 AVSP--------KAFSQAIGMVRRG--GTIALNGLP  265 (340)
T ss_dssp             SCCH--------HHHHHHHHHEEEE--EEEEECSCC
T ss_pred             CCCH--------HHHHHHHHHhccC--CEEEEeCCC
Confidence            8731        1124455555444  488887654

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.36  E-value=0.00037  Score=62.82  Aligned_cols=77  Identities=19%  Similarity=0.232  Sum_probs=50.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCC----CCCeEE-E-----EcccCCChHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD----NPSLQI-V-----KADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~-~-----~~D~~d~~~~~~~~~~~~~  136 (296)
                      |+|.|+| .|++|..++..|++.|++|++++|++++...+....    .+++.- +     .+.+.- ..+..+++.+ +
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~~-a   77 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVLD-S   77 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHHT-C
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhcc-C
Confidence            4799998 699999999999999999999999988776544211    010000 0     001111 1223445667 9


Q ss_pred             CEEEEcCCCC
Q 022495          137 EAVVCATGFQ  146 (296)
Q Consensus       137 d~vv~~ag~~  146 (296)
                      |+||.+.+..
T Consensus        78 DvviiaVptp   87 (436)
T 1mv8_A           78 DVSFICVGTP   87 (436)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEEEcCCC
Confidence            9999998643

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.34  E-value=0.00063  Score=58.23  Aligned_cols=100  Identities=18%  Similarity=0.207  Sum_probs=58.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhc----ccCC--CCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTT----LSKD--NPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      |+|.|+|+ |.+|..++..|+..|+  +|+++++++++....    ....  .....+..   .| .    +++++ +|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~-~----~a~~~-aDv   70 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GG-H----SELAD-AQV   70 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---EC-G----GGGTT-CSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CC-H----HHhCC-CCE
Confidence            48999998 9999999999999998  999999987654321    1100  11222222   23 2    34777 999


Q ss_pred             EEEcCCCCCCCC--C--cchhHH---HHHHHHHHHcCCC-EEEEEc
Q 022495          139 VVCATGFQPGWD--L--FAPWKA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       139 vv~~ag~~~~~~--~--~~~~~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      ||.+++......  .  ....+.   +.+++.+.+.... .+|.+|
T Consensus        71 VIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           71 VILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             EEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            999997543211  1  111111   6677777665433 444443

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.33  E-value=0.00039  Score=60.91  Aligned_cols=96  Identities=17%  Similarity=0.244  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchh---hhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKA---KTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ++++|.|.||+|.+|+.+++.|.++. .+++++.+..+..   .+........+   ..|+.- .+  .+.+++ +|+||
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~-~~--~~~~~~-vDvVf   87 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVS-VK--DADFST-VDAVF   87 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBC-GG--GCCGGG-CSEEE
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc---ccccee-cc--hhHhcC-CCEEE
Confidence            34689999999999999999999876 4777776543211   11110000111   134433 23  334567 99999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .|+|....         ...++.+ +.|+ ++|-.|+.
T Consensus        88 ~atp~~~s---------~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           88 CCLPHGTT---------QEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             ECCCTTTH---------HHHHHTS-CTTC-EEEECSST
T ss_pred             EcCCchhH---------HHHHHHH-hCCC-EEEECCcc
Confidence            99864321         4456666 6676 68888875

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.32  E-value=0.00044  Score=60.76  Aligned_cols=98  Identities=19%  Similarity=0.219  Sum_probs=61.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHH-CCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC-hHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLA-KGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-SAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~-~~d~vv~  141 (296)
                      .+.+|||+||+|.+|...++.+.. .|.+|+++++++++.+....   -+.+.+ .|..+. .+.+.+. .+ .+|+||.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~---lGad~v-i~~~~~~~~~v~~~-~~~g~Dvvid  245 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS---LGAHHV-IDHSKPLAAEVAAL-GLGAPAFVFS  245 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH---TTCSEE-ECTTSCHHHHHHTT-CSCCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH---cCCCEE-EeCCCCHHHHHHHh-cCCCceEEEE
Confidence            467999999999999998887766 58999999998876654332   122222 233331 2333333 22 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |+|..        ......++.++..  +++|.++.
T Consensus       246 ~~g~~--------~~~~~~~~~l~~~--G~iv~~g~  271 (363)
T 4dvj_A          246 TTHTD--------KHAAEIADLIAPQ--GRFCLIDD  271 (363)
T ss_dssp             CSCHH--------HHHHHHHHHSCTT--CEEEECSC
T ss_pred             CCCch--------hhHHHHHHHhcCC--CEEEEECC
Confidence            98731        1124445555444  48888743

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.31  E-value=0.00043  Score=61.00  Aligned_cols=97  Identities=12%  Similarity=0.113  Sum_probs=65.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+.+|||+|+ |.+|...++.+...|++|+++++++++.+....   -++.. ..|..+ .+.+.++..+ +|+||.++|
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~---lGa~~-vi~~~~-~~~~~~~~~g-~Dvvid~~g  266 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA---LGADE-VVNSRN-ADEMAAHLKS-FDFILNTVA  266 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---HTCSE-EEETTC-HHHHHTTTTC-EEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---cCCcE-Eecccc-HHHHHHhhcC-CCEEEECCC
Confidence            4789999997 889999999888899999999998877654322   12222 236666 5555555456 999999998


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ....        ....++.++..  +++|.++..
T Consensus       267 ~~~~--------~~~~~~~l~~~--G~iv~~G~~  290 (369)
T 1uuf_A          267 APHN--------LDDFTTLLKRD--GTMTLVGAP  290 (369)
T ss_dssp             SCCC--------HHHHHTTEEEE--EEEEECCCC
T ss_pred             CHHH--------HHHHHHHhccC--CEEEEeccC
Confidence            5311        12344444443  488887654

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=97.31  E-value=0.00049  Score=61.70  Aligned_cols=110  Identities=17%  Similarity=0.103  Sum_probs=67.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC------------ChHHHHHHh
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE------------GSAKLSEAI  132 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d------------~~~~~~~~~  132 (296)
                      .+.+|.|+| .|++|..++..|++.|++|++++.++++.+.+..+.   ..+++-++.+            ...+..+++
T Consensus        20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~---~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai   95 (444)
T 3vtf_A           20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGR---PHIYEPGLEEALGRALSSGRLSFAESAEEAV   95 (444)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTC---CSSCCTTHHHHHHHHHHTTCEEECSSHHHHH
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCC---CCCCCCCHHHHHHHHHHcCCeeEEcCHHHHH
Confidence            367999997 699999999999999999999999998877654321   1111111100            011234445


Q ss_pred             cCCCCEEEEcCCCCCCCCCcch-hHH----HHHHHHHHHcCCC-EEEEEccce
Q 022495          133 GDDSEAVVCATGFQPGWDLFAP-WKA----INLVEACRKRGVN-RFILISSIL  179 (296)
Q Consensus       133 ~~~~d~vv~~ag~~~~~~~~~~-~~~----~~~l~~~~~~~~~-~iV~~SS~~  179 (296)
                      .. .|++|-|.+.+...+.... ..+    +.+.+.++..+.+ -+|+=||+.
T Consensus        96 ~~-ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVp  147 (444)
T 3vtf_A           96 AA-TDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVP  147 (444)
T ss_dssp             HT-SSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCC
T ss_pred             hc-CCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCC
Confidence            56 8999999875433222111 111    5666666654323 455556654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.31  E-value=0.00022  Score=61.07  Aligned_cols=40  Identities=28%  Similarity=0.209  Sum_probs=34.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT  106 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~  106 (296)
                      +|+|.|+|+ |.+|..++..|.+.|++|++++|++++...+
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~   42 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAI   42 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence            478999996 9999999999999999999999998766543

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.31  E-value=0.00045  Score=56.15  Aligned_cols=73  Identities=19%  Similarity=0.301  Sum_probs=54.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      .++++++|||+|| |-+|...++.|++.|++|++++.+... ..++.  ...+++++..+..+ .+     +.+ +|.||
T Consensus        27 l~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~--~~~~i~~i~~~~~~-~d-----L~~-adLVI   96 (223)
T 3dfz_A           27 LDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWE--AKGQLRVKRKKVGE-ED-----LLN-VFFIV   96 (223)
T ss_dssp             ECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHH--HTTSCEEECSCCCG-GG-----SSS-CSEEE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH--HcCCcEEEECCCCH-hH-----hCC-CCEEE
Confidence            4678999999997 999999999999999999998876543 22222  23467887766654 22     566 99999


Q ss_pred             EcCC
Q 022495          141 CATG  144 (296)
Q Consensus       141 ~~ag  144 (296)
                      -+.+
T Consensus        97 aAT~  100 (223)
T 3dfz_A           97 VATN  100 (223)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            7654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.30  E-value=0.0006  Score=60.70  Aligned_cols=104  Identities=14%  Similarity=0.161  Sum_probs=67.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccC-------------CChH----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT-------------EGSA----  126 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-------------d~~~----  126 (296)
                      +.+++|+|+|+ |.+|..+++.+...|.+|++.++++.+......   -+..++..|..             + .+    
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~---lGa~~~~~~~~~~~~~~~g~~~~~~-~~~~~~  244 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS---MGAEFLELDFKEEAGSGDGYAKVMS-DAFIKA  244 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH---TTCEECCC--------CCHHHHHHS-HHHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---cCCEEEEecccccccccccchhhcc-HHHHHH
Confidence            45789999996 999999999999999999999999876554321   23444332321             1 11    


Q ss_pred             ---HHHHHhcCCCCEEEEcCCCCCCCC-CcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          127 ---KLSEAIGDDSEAVVCATGFQPGWD-LFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       127 ---~~~~~~~~~~d~vv~~ag~~~~~~-~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                         .+.+.+.+ .|+||.+++...... ....   ...++.|+..  ..||.++..
T Consensus       245 ~~~~l~e~~~~-aDvVI~~~~~pg~~ap~li~---~~~l~~mk~g--~vIVdva~~  294 (401)
T 1x13_A          245 EMELFAAQAKE-VDIIVTTALIPGKPAPKLIT---REMVDSMKAG--SVIVDLAAQ  294 (401)
T ss_dssp             HHHHHHHHHHH-CSEEEECCCCTTSCCCCCBC---HHHHHTSCTT--CEEEETTGG
T ss_pred             HHHHHHHHhCC-CCEEEECCccCCCCCCeeeC---HHHHhcCCCC--cEEEEEcCC
Confidence               36677777 999999976532111 1111   3455666533  367777753

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.30  E-value=0.0018  Score=55.64  Aligned_cols=101  Identities=19%  Similarity=0.194  Sum_probs=62.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcc----c---CCCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTL----S---KDNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----~---~~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      .++|.|+|+ |.+|..++..|+..|.  +|++++++++......    .   .....+.+..   .+     .+++++ +
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~---~~-----~~al~~-a   75 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH---GD-----YDDCRD-A   75 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE---CC-----GGGTTT-C
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc---Cc-----HHHhCC-C
Confidence            479999998 9999999999988774  7999999876443211    0   0111333332   12     234777 9


Q ss_pred             CEEEEcCCCCCCCCCcch----hHH---HHHHHHHHHcCCC-EEEEEc
Q 022495          137 EAVVCATGFQPGWDLFAP----WKA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~----~~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      |+||.++|..........    .+.   +.+++.+.+.... .++++|
T Consensus        76 DvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           76 DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             SEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            999999987543321111    111   7777777776533 444443

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.30  E-value=0.00026  Score=62.11  Aligned_cols=97  Identities=15%  Similarity=0.060  Sum_probs=63.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCCh-HHHHHHhcCCCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS-AKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~d~vv~~a  143 (296)
                      .+.+|||+|+ |.+|..+++.+...|++|+++++++++.+....   -+...+ .|..+ . +...++..+ +|+||.++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~---lGa~~v-~~~~~-~~~~~~~~~~~-~D~vid~~  251 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK---MGADHY-IATLE-EGDWGEKYFDT-FDLIVVCA  251 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH---HTCSEE-EEGGG-TSCHHHHSCSC-EEEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---cCCCEE-EcCcC-chHHHHHhhcC-CCEEEECC
Confidence            4789999999 999999999888899999999998876653321   122221 35544 3 333333356 99999999


Q ss_pred             CC--CCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          144 GF--QPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       144 g~--~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |.  ....        ...++.++..  +++|.++..
T Consensus       252 g~~~~~~~--------~~~~~~l~~~--G~iv~~g~~  278 (360)
T 1piw_A          252 SSLTDIDF--------NIMPKAMKVG--GRIVSISIP  278 (360)
T ss_dssp             SCSTTCCT--------TTGGGGEEEE--EEEEECCCC
T ss_pred             CCCcHHHH--------HHHHHHhcCC--CEEEEecCC
Confidence            85  2221        1233444443  488887754

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=97.30  E-value=0.0015  Score=54.72  Aligned_cols=103  Identities=17%  Similarity=0.302  Sum_probs=65.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-----hhhhccc--------------------CCCCCe-E
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-----KAKTTLS--------------------KDNPSL-Q  115 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~~~--------------------~~~~~~-~  115 (296)
                      .++++|+|||+|| |-+|...++.|++.|++|++++.+..     ....+..                    ....++ .
T Consensus         9 ~~l~~k~VLVVGg-G~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~   87 (274)
T 1kyq_A            9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYE   87 (274)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSE
T ss_pred             EEcCCCEEEEECC-cHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeE
Confidence            3567899999996 99999999999999999999886543     1111110                    012356 7


Q ss_pred             EEEcccCCChHHHH---HHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHc-CCCEEEEEcc
Q 022495          116 IVKADVTEGSAKLS---EAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKR-GVNRFILISS  177 (296)
Q Consensus       116 ~~~~D~~d~~~~~~---~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~~SS  177 (296)
                      ++..++.+ .+ +.   + ..+ +|.||-+.+.        ......+.+.|++. |++.+|++..
T Consensus        88 ~i~~~~~~-~d-L~~l~~-~~~-adlViaat~d--------~~~n~~I~~~Ar~~f~~~i~VNvvd  141 (274)
T 1kyq_A           88 YIRSDFKD-EY-LDLENE-NDA-WYIIMTCIPD--------HPESARIYHLCKERFGKQQLVNVAD  141 (274)
T ss_dssp             EECSSCCG-GG-GCCSST-TCC-EEEEEECCSC--------HHHHHHHHHHHHHHHCTTSEEEETT
T ss_pred             EEcCCCCH-HH-Hhhccc-CCC-eEEEEEcCCC--------hHHHHHHHHHHHHhcCCCcEEEECC
Confidence            77776644 22 21   1 225 8888877652        12236677778876 4445665443

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.29  E-value=0.0018  Score=60.28  Aligned_cols=90  Identities=23%  Similarity=0.228  Sum_probs=68.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag~  145 (296)
                      ++++|.|+ |-+|.++++.|.+.|++|++++.+++...+.       ..++.+|.+| .+.++++ ++. +|.+|.+.+-
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~-------~~~i~gD~t~-~~~L~~agi~~-ad~vi~~~~~  418 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND-------HVVVYGDATV-GQTLRQAGIDR-ASGIIVTTND  418 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS-------SCEEESCSSS-STHHHHHTTTS-CSEEEECCSC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc-------CCEEEeCCCC-HHHHHhcCccc-cCEEEEECCC
Confidence            78999997 9999999999999999999999998875432       2889999999 7888776 444 9999988752


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCC-EEEE
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVN-RFIL  174 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~  174 (296)
                              ......+.-.+++.+.+ ++|-
T Consensus       419 --------d~~ni~~~~~ak~l~~~~~iia  440 (565)
T 4gx0_A          419 --------DSTNIFLTLACRHLHSHIRIVA  440 (565)
T ss_dssp             --------HHHHHHHHHHHHHHCSSSEEEE
T ss_pred             --------chHHHHHHHHHHHHCCCCEEEE
Confidence                    12223444556666654 5543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.27  E-value=0.0003  Score=60.82  Aligned_cols=95  Identities=17%  Similarity=0.157  Sum_probs=59.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH--HHHHHhcCCCCEEEEcCCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA--KLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~~~~~d~vv~~ag~  145 (296)
                      +|+|+||+|.+|...++.+...|++|+++++++++.+.... .  +.+.+ .|..+ .+  .+.+.-.+.+|+||.|+|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-l--Ga~~~-i~~~~-~~~~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L--GAKEV-LARED-VMAERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T--TCSEE-EECC----------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-c--CCcEE-EecCC-cHHHHHHHhcCCcccEEEECCcH
Confidence            89999999999999999998899999999998776554322 1  22221 24444 21  1222211149999999984


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .    .     ....++.++..  +++|.++..
T Consensus       227 ~----~-----~~~~~~~l~~~--G~~v~~G~~  248 (328)
T 1xa0_A          227 R----T-----LATVLSRMRYG--GAVAVSGLT  248 (328)
T ss_dssp             T----T-----HHHHHHTEEEE--EEEEECSCC
T ss_pred             H----H-----HHHHHHhhccC--CEEEEEeec
Confidence            1    1     13344444443  488887754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.27  E-value=0.0004  Score=62.79  Aligned_cols=42  Identities=31%  Similarity=0.204  Sum_probs=36.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK  104 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~  104 (296)
                      ..+.+|+++|||+ |.||+.+++.|...|++|++.++++.+..
T Consensus       261 ~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~  302 (488)
T 3ond_A          261 VMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICAL  302 (488)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence            3478999999997 59999999999999999999999876543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.27  E-value=0.00041  Score=58.81  Aligned_cols=66  Identities=20%  Similarity=0.236  Sum_probs=49.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      +|+|.|+|++|.+|..+++.|.+.|++|++.+|++++......   .++     +..+ .   .+.+.+ +|+||.+..
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~---~g~-----~~~~-~---~~~~~~-aDvVi~av~   76 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG---MGI-----PLTD-G---DGWIDE-ADVVVLALP   76 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH---TTC-----CCCC-S---SGGGGT-CSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh---cCC-----CcCC-H---HHHhcC-CCEEEEcCC
Confidence            4699999999999999999999999999999999877654432   122     1223 1   234566 899998763

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.26  E-value=0.0011  Score=57.26  Aligned_cols=66  Identities=24%  Similarity=0.311  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      ++|+|.|+|. |.+|..+++.|++.|++|++.+|++++.+++..   .++..        ..++.+++.+ +|+||-+.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~---~g~~~--------~~~~~e~~~~-aDvVi~~v   95 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAA---LGATI--------HEQARAAARD-ADIVVSML   95 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT---TTCEE--------ESSHHHHHTT-CSEEEECC
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH---CCCEe--------eCCHHHHHhc-CCEEEEEC
Confidence            4689999985 999999999999999999999999887765543   12221        1224445556 77777665

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.26  E-value=0.00064  Score=59.00  Aligned_cols=94  Identities=17%  Similarity=0.188  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC---CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +++|.|.||+|.+|+.+++.|.+++   .+++++..... ...........+.+  .|. | .+    .+++ +|+||.|
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~-~G~~~~~~~~~i~~--~~~-~-~~----~~~~-vDvVf~a   72 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERS-EGKTYRFNGKTVRV--QNV-E-EF----DWSQ-VHIALFS   72 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT-TTCEEEETTEEEEE--EEG-G-GC----CGGG-CSEEEEC
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCC-CCCceeecCceeEE--ecC-C-hH----HhcC-CCEEEEC
Confidence            5789999999999999999999873   46776653211 10001001112222  222 1 11    2356 9999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      .|..         .....++.+.+.|+ ++|-.|+..
T Consensus        73 ~g~~---------~s~~~a~~~~~~G~-~vId~s~~~   99 (336)
T 2r00_A           73 AGGE---------LSAKWAPIAAEAGV-VVIDNTSHF   99 (336)
T ss_dssp             SCHH---------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CCch---------HHHHHHHHHHHcCC-EEEEcCCcc
Confidence            8632         12567777788886 677777763

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=97.26  E-value=0.0012  Score=57.07  Aligned_cols=97  Identities=16%  Similarity=0.190  Sum_probs=62.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|+|.|+|. |.||+.+++.|...|++|++.+|++.+......   .++.+     .+    +.+++.+ +|+|+.+
T Consensus       152 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~---~g~~~-----~~----l~e~l~~-aDvVi~~  217 (330)
T 2gcg_A          152 GLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE---FQAEF-----VS----TPELAAQ-SDFIVVA  217 (330)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT---TTCEE-----CC----HHHHHHH-CSEEEEC
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHh---cCcee-----CC----HHHHHhh-CCEEEEe
Confidence            567899999995 999999999999999999999988754432211   12322     13    3445566 9999988


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ............   ..+++.++. + .-||.+|+.
T Consensus       218 vp~~~~t~~~i~---~~~~~~mk~-g-ailIn~srg  248 (330)
T 2gcg_A          218 CSLTPATEGLCN---KDFFQKMKE-T-AVFINISRG  248 (330)
T ss_dssp             CCCCTTTTTCBS---HHHHHHSCT-T-CEEEECSCG
T ss_pred             CCCChHHHHhhC---HHHHhcCCC-C-cEEEECCCC
Confidence            765433222211   334454443 2 356777664

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.25  E-value=0.0034  Score=53.94  Aligned_cols=101  Identities=16%  Similarity=0.055  Sum_probs=62.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhccc---------CCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLS---------KDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      .++|.|+|+ |.+|..++..|++.|+ +|++.+++++.......         ....++.. .   .|    . +++++ 
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d----~-~a~~~-   72 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-T---DD----Y-ADISG-   72 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-E---SC----G-GGGTT-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-C---CC----H-HHhCC-
Confidence            468999997 9999999999999998 99999998866543210         00112211 1   22    2 34677 


Q ss_pred             CCEEEEcCCCCCCCCCcc----hhH---HHHHHHHHHHcCCC-EEEEEcc
Q 022495          136 SEAVVCATGFQPGWDLFA----PWK---AINLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~~----~~~---~~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      +|+||.++|.........    ..+   .+.+++.+.+.... .+|.+|.
T Consensus        73 aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            999999998654332211    111   16666666655423 4554544

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.25  E-value=0.00063  Score=58.92  Aligned_cols=97  Identities=15%  Similarity=0.158  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCc---c---hhhhcccC-CC-CCeEEEEcccCCChHHHHHHhcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDL---D---KAKTTLSK-DN-PSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~---~---~~~~~~~~-~~-~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      |++|.|+||||++|..+++.|.++ +.+++.+..+.   +   +..+..+. .. ..+.+...  .| .+   ++..+ +
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~-~~---~~~~~-~   76 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SD-IS---EFSPG-V   76 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SS-GG---GTCTT-C
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CC-HH---HHhcC-C
Confidence            478999999999999999999984 56777775433   1   12222110 11 12222222  02 12   22266 9


Q ss_pred             CEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          137 EAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      |+||.|.+.         .....+++.+.+.|+ ++|-.|+..
T Consensus        77 Dvvf~a~p~---------~~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           77 DVVFLATAH---------EVSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             SEEEECSCH---------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CEEEECCCh---------HHHHHHHHHHHHCCC-EEEEcCCcc
Confidence            999988752         111566677777786 688888763

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.25  E-value=0.0016  Score=56.19  Aligned_cols=74  Identities=15%  Similarity=0.244  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcc---cC----CCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTL---SK----DNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~---~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      +++|.|+|| |.+|..++..|+..|. +|+++++++++++...   ..    ......+..  .+|    . +++++ +|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~--t~d----~-~al~~-aD   74 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG--SNT----Y-DDLAG-AD   74 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE--ECC----G-GGGTT-CS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE--CCC----H-HHhCC-CC
Confidence            468999998 9999999999999997 8998898887654211   00    001111111  022    2 45778 99


Q ss_pred             EEEEcCCCCCC
Q 022495          138 AVVCATGFQPG  148 (296)
Q Consensus       138 ~vv~~ag~~~~  148 (296)
                      +||.++|....
T Consensus        75 ~Vi~a~g~p~k   85 (322)
T 1t2d_A           75 VVIVTAGFTKA   85 (322)
T ss_dssp             EEEECCSCSSC
T ss_pred             EEEEeCCCCCC
Confidence            99999986543

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.23  E-value=0.0011  Score=58.46  Aligned_cols=70  Identities=14%  Similarity=0.157  Sum_probs=55.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +.+++|+|+|+ |.+|+.+++.+.+.|++|++++.++.......     --.++..|..| .+.+.++.+. +|+|+.
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-----ad~~~~~~~~d-~~~l~~~~~~-~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-----AHEFIQAKYDD-EKALNQLGQK-CDVITY   79 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-----SSEEEECCTTC-HHHHHHHHHH-CSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-----CCEEEECCCCC-HHHHHHHHHh-CCccee
Confidence            35789999995 99999999999999999999987765322211     12467789999 8999998888 998854

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.23  E-value=0.0016  Score=55.43  Aligned_cols=66  Identities=24%  Similarity=0.279  Sum_probs=44.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+||.++| .|.+|..+++.|++.|++|++.+|++++.+++..   .++..        .++..++..+ +|+||-|..
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~---~G~~~--------~~s~~e~~~~-~dvvi~~l~   70 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK---LGATV--------VENAIDAITP-GGIVFSVLA   70 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT---TTCEE--------CSSGGGGCCT-TCEEEECCS
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH---cCCeE--------eCCHHHHHhc-CCceeeecc
Confidence            35899998 6999999999999999999999999988765542   23322        1234455666 999998864

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.23  E-value=0.0012  Score=57.68  Aligned_cols=97  Identities=16%  Similarity=0.161  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccC--CChH---HHHHHh-cCCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVT--EGSA---KLSEAI-GDDSE  137 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--d~~~---~~~~~~-~~~~d  137 (296)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.... .  ++.. ..|..  |..+   .+.+.. .+ +|
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l--Ga~~-vi~~~~~~~~~~~~~i~~~~~~g-~D  244 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-I--GADL-VLQISKESPQEIARKVEGQLGCK-PE  244 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T--TCSE-EEECSSCCHHHHHHHHHHHHTSC-CS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h--CCCE-EEcCcccccchHHHHHHHHhCCC-CC
Confidence            4789999996 9999999998888998 89999998876553322 1  2221 12433  1012   233322 35 99


Q ss_pred             EEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          138 AVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +||.++|..        ......++.++..  +++|.++.
T Consensus       245 ~vid~~g~~--------~~~~~~~~~l~~~--G~iv~~G~  274 (356)
T 1pl8_A          245 VTIECTGAE--------ASIQAGIYATRSG--GTLVLVGL  274 (356)
T ss_dssp             EEEECSCCH--------HHHHHHHHHSCTT--CEEEECSC
T ss_pred             EEEECCCCh--------HHHHHHHHHhcCC--CEEEEEec
Confidence            999998731        1123445555443  48988764

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.22  E-value=0.0013  Score=56.52  Aligned_cols=101  Identities=16%  Similarity=0.083  Sum_probs=64.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcc---cCC---CCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTL---SKD---NPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~---~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +||.|+|| |.+|..++..|+..+  .+|+++++++++++...   ...   ...+++.. |  +     .+++++ +|+
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~-----~~a~~~-aD~   70 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S-----YGDLEG-ARA   70 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C-----GGGGTT-EEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C-----HHHhCC-CCE
Confidence            58999998 999999999999887  58999999876554211   100   12333332 2  2     234778 999


Q ss_pred             EEEcCCCCCCCCCcchh----HH---HHHHHHHHHcCC-CEEEEEcc
Q 022495          139 VVCATGFQPGWDLFAPW----KA---INLVEACRKRGV-NRFILISS  177 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~~-~~iV~~SS  177 (296)
                      ||..+|...........    +.   +.+++.+.+.+. ..+|.+|.
T Consensus        71 Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           71 VVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999976543221111    11   677777777653 35555543

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=97.22  E-value=0.00056  Score=58.98  Aligned_cols=98  Identities=16%  Similarity=0.198  Sum_probs=64.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|+|.|+| .|.||+.+++.|...|.+|++.+|++......     .  ..+.      .+++.+++.+ +|+|+.
T Consensus       133 ~~l~gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~--~~~~------~~~l~ell~~-aDvV~l  197 (324)
T 3evt_A          133 STLTGQQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADHF-----H--ETVA------FTATADALAT-ANFIVN  197 (324)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC-----S--EEEE------GGGCHHHHHH-CSEEEE
T ss_pred             ccccCCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHhH-----h--hccc------cCCHHHHHhh-CCEEEE
Confidence            467899999998 59999999999999999999999987543211     0  1111      2335566777 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +............   ...++.|+..  .-||.+|...
T Consensus       198 ~lPlt~~t~~li~---~~~l~~mk~g--ailIN~aRG~  230 (324)
T 3evt_A          198 ALPLTPTTHHLFS---TELFQQTKQQ--PMLINIGRGP  230 (324)
T ss_dssp             CCCCCGGGTTCBS---HHHHHTCCSC--CEEEECSCGG
T ss_pred             cCCCchHHHHhcC---HHHHhcCCCC--CEEEEcCCCh
Confidence            8754432222111   3445555432  3688888753

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.21  E-value=0.00047  Score=58.15  Aligned_cols=72  Identities=28%  Similarity=0.363  Sum_probs=53.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++++++|+|+|+ |.+|+.+++.|.+.|.+|++.+|++++..++...  -++..  .+  +    +.+.+.+ +|+||++
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~--~g~~~--~~--~----~~~~~~~-aDiVi~a  193 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQK--FPLEV--VN--S----PEEVIDK-VQVIVNT  193 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTT--SCEEE--CS--C----GGGTGGG-CSEEEEC
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH--cCCee--eh--h----HHhhhcC-CCEEEEe
Confidence            467899999995 9999999999999999999999998776655421  12221  11  2    2334566 9999999


Q ss_pred             CCCC
Q 022495          143 TGFQ  146 (296)
Q Consensus       143 ag~~  146 (296)
                      .+..
T Consensus       194 tp~~  197 (275)
T 2hk9_A          194 TSVG  197 (275)
T ss_dssp             SSTT
T ss_pred             CCCC
Confidence            8654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.21  E-value=0.00087  Score=57.39  Aligned_cols=82  Identities=15%  Similarity=0.046  Sum_probs=56.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeE-EEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQ-IVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++.+++++|+|++.-+|+.+++.|++.|.+|++.+|+..+..+.........+ ......++ .+.+.+.+.+ .|+||.
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~-~~~L~e~l~~-ADIVIs  251 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYS-EDLLKKCSLD-SDVVIT  251 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECC-HHHHHHHHHH-CSEEEE
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhccccccccccc-HhHHHHHhcc-CCEEEE
Confidence            67899999999877889999999999999999998885433221110111111 11111133 4678888888 999999


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +.|..
T Consensus       252 Atg~p  256 (320)
T 1edz_A          252 GVPSE  256 (320)
T ss_dssp             CCCCT
T ss_pred             CCCCC
Confidence            98854

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.21  E-value=0.0023  Score=55.93  Aligned_cols=103  Identities=14%  Similarity=0.188  Sum_probs=67.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhc----------------------cc--CCCCCeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTT----------------------LS--KDNPSLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------------------~~--~~~~~~~~~  117 (296)
                      .+++.+|+|.|+ |++|+++++.|+..|. ++++++++.-....+                      +.  ....+++.+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            456789999996 9999999999999995 788888764211110                      00  022346667


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ..++.+ ...+.+ +++ +|+||.+.....       .....+-++|.+.++ .+|+.+.
T Consensus       194 ~~~i~~-~~~~~~-~~~-~DlVvd~~Dn~~-------~~r~~ln~~c~~~~~-p~i~~~~  242 (353)
T 3h5n_A          194 ALNIND-YTDLHK-VPE-ADIWVVSADHPF-------NLINWVNKYCVRANQ-PYINAGY  242 (353)
T ss_dssp             ECCCCS-GGGGGG-SCC-CSEEEECCCCST-------THHHHHHHHHHHTTC-CEEEEEE
T ss_pred             ecccCc-hhhhhH-hcc-CCEEEEecCChH-------HHHHHHHHHHHHhCC-CEEEEEE
Confidence            777776 444666 888 999998763111       011345577888885 5666543

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.20  E-value=0.0011  Score=59.79  Aligned_cols=95  Identities=12%  Similarity=0.219  Sum_probs=63.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-C---eEEEEEcCcchhhhcccCCCCCeEEEEcccCCC-h-HHHHHHhcCCCCEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-F---AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-S-AKLSEAIGDDSEAVV  140 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~-~~~~~~~~~~~d~vv  140 (296)
                      ++|+|+| .|+||+.+++.|++++ .   +|++.+.+..... ...  ..++.+...++++. . +.+.+++++ .|+||
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~-~~~--~~g~~~~~~~Vdadnv~~~l~aLl~~-~DvVI   88 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD-VAQ--QYGVSFKLQQITPQNYLEVIGSTLEE-NDFLI   88 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCC-HHH--HHTCEEEECCCCTTTHHHHTGGGCCT-TCEEE
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhh-HHh--hcCCceeEEeccchhHHHHHHHHhcC-CCEEE
Confidence            5799999 6999999999999874 4   6888776654321 111  11456666666541 3 335567777 69999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILIS  176 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~S  176 (296)
                      |.+-. .        ....++++|.+.|+ ++|-++
T Consensus        89 N~s~~-~--------~~l~Im~acleaGv-~YlDTa  114 (480)
T 2ph5_A           89 DVSIG-I--------SSLALIILCNQKGA-LYINAA  114 (480)
T ss_dssp             ECCSS-S--------CHHHHHHHHHHHTC-EEEESS
T ss_pred             ECCcc-c--------cCHHHHHHHHHcCC-CEEECC
Confidence            85521 1        12579999999996 555444

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.20  E-value=0.0017  Score=56.03  Aligned_cols=103  Identities=17%  Similarity=0.186  Sum_probs=63.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcc---cC---CCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTL---SK---DNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      +.+||.|+|| |.+|..++..|+..+.  +|+++++++++++...   ..   ....+.+.. |  +     .+++++ +
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~-----~~a~~~-a   77 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E-----YSDAKD-A   77 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C-----GGGGGG-C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C-----HHHhCC-C
Confidence            3579999998 9999999999998874  7999999876554211   10   112333332 2  2     334777 9


Q ss_pred             CEEEEcCCCCCCCCCcchh----HH---HHHHHHHHHcC-CCEEEEEcc
Q 022495          137 EAVVCATGFQPGWDLFAPW----KA---INLVEACRKRG-VNRFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~-~~~iV~~SS  177 (296)
                      |+||..+|...........    +.   +.+++.+.+.. -..+|.+|.
T Consensus        78 DvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           78 DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             SEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9999999975433211111    11   66777777665 335665543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.20  E-value=0.0021  Score=55.25  Aligned_cols=101  Identities=16%  Similarity=0.189  Sum_probs=62.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcc----cC--CCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTL----SK--DNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      .++|.|+|| |.+|..++..|+..+.  +|+++++++++++...    ..  ....+++.. |  +     .+++++ +|
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~-----~~a~~~-aD   74 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E-----YSDCKD-AD   74 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C-----GGGGTT-CS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C-----HHHhCC-CC
Confidence            369999998 9999999999998875  7999999876554211    00  112333332 2  2     334778 99


Q ss_pred             EEEEcCCCCCCCCC----cchhHH---HHHHHHHHHcCC-CEEEEEc
Q 022495          138 AVVCATGFQPGWDL----FAPWKA---INLVEACRKRGV-NRFILIS  176 (296)
Q Consensus       138 ~vv~~ag~~~~~~~----~~~~~~---~~~l~~~~~~~~-~~iV~~S  176 (296)
                      +||.++|.......    ....+.   +.+++.+.+... ..+|.+|
T Consensus        75 vVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           75 LVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             EEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            99999987543211    111111   777787777753 3565554

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.19  E-value=0.0011  Score=58.14  Aligned_cols=94  Identities=19%  Similarity=0.224  Sum_probs=55.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC---eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      +++|.|.||||++|..+++.|.++++   +++.+.-.. .........  +.....-++..  +    .+.+ +|+||.|
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~-saG~~~~~~--~~~~~~~~~~~--~----~~~~-~Dvvf~a   71 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASAR-SAGKSLKFK--DQDITIEETTE--T----AFEG-VDIALFS   71 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTT-TTTCEEEET--TEEEEEEECCT--T----TTTT-CSEEEEC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccc-cCCCcceec--CCCceEeeCCH--H----HhcC-CCEEEEC
Confidence            46899999999999999998888765   344443211 111111001  11221122221  1    2467 9999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +|.         .....+++.+.+.|+ ++|-.|+..
T Consensus        72 ~~~---------~~s~~~a~~~~~~G~-~vIDlSa~~   98 (366)
T 3pwk_A           72 AGS---------STSAKYAPYAVKAGV-VVVDNTSYF   98 (366)
T ss_dssp             SCH---------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CCh---------HhHHHHHHHHHHCCC-EEEEcCCcc
Confidence            862         112566677777786 677777753

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.19  E-value=0.0014  Score=57.63  Aligned_cols=101  Identities=9%  Similarity=0.043  Sum_probs=63.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|+|+||+|.+|...++.+...|++|+++. ++++.+.... .  ++.. ..|..+.  .+.+.+...+++|++|.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~-l--Ga~~-vi~~~~~~~~~~v~~~t~g~~d~v~d  237 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS-R--GAEE-VFDYRAPNLAQTIRTYTKNNLRYALD  237 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH-T--TCSE-EEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH-c--CCcE-EEECCCchHHHHHHHHccCCccEEEE
Confidence            3578999999999999999999999999999876 5555443221 1  2221 1244441  23344443335999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ++|..        ......++.+.+. -+++|.++..
T Consensus       238 ~~g~~--------~~~~~~~~~l~~~-~G~iv~~g~~  265 (371)
T 3gqv_A          238 CITNV--------ESTTFCFAAIGRA-GGHYVSLNPF  265 (371)
T ss_dssp             SSCSH--------HHHHHHHHHSCTT-CEEEEESSCC
T ss_pred             CCCch--------HHHHHHHHHhhcC-CCEEEEEecC
Confidence            99841        1113344444222 2589988754

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=97.18  E-value=0.0021  Score=54.41  Aligned_cols=94  Identities=18%  Similarity=0.135  Sum_probs=63.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|+|.|+| .|.||+.+++.|...|.+|++.+|++....        .+     +.   .+++.+++.+ +|+|+.+
T Consensus       119 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~--------~~-----~~---~~~l~ell~~-aDiV~l~  180 (290)
T 3gvx_A          119 LLYGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQN--------VD-----VI---SESPADLFRQ-SDFVLIA  180 (290)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTT--------CS-----EE---CSSHHHHHHH-CSEEEEC
T ss_pred             eeecchheeec-cCchhHHHHHHHHhhCcEEEEEeccccccc--------cc-----cc---cCChHHHhhc-cCeEEEE
Confidence            47789999998 599999999999999999999999875431        11     11   2246666777 9999988


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ............   ...++.|+..  .-||.+|+..
T Consensus       181 ~P~t~~t~~li~---~~~l~~mk~g--ailIN~aRG~  212 (290)
T 3gvx_A          181 IPLTDKTRGMVN---SRLLANARKN--LTIVNVARAD  212 (290)
T ss_dssp             CCCCTTTTTCBS---HHHHTTCCTT--CEEEECSCGG
T ss_pred             eeccccchhhhh---HHHHhhhhcC--ceEEEeehhc
Confidence            765443322221   3344444432  2677777654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.18  E-value=0.00063  Score=59.91  Aligned_cols=98  Identities=12%  Similarity=0.168  Sum_probs=62.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhc------CCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIG------DDSE  137 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------~~~d  137 (296)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+....   -++.. ..|..+ .+....+.+      +.+|
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~---lGa~~-vi~~~~-~~~~~~i~~~~~~~~gg~D  255 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEE---VGATA-TVDPSA-GDVVEAIAGPVGLVPGGVD  255 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH---HTCSE-EECTTS-SCHHHHHHSTTSSSTTCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH---cCCCE-EECCCC-cCHHHHHHhhhhccCCCCC
Confidence            4789999998 9999999998888998 78888888776543221   12222 135444 333333222      1399


Q ss_pred             EEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          138 AVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +||.++|..        ......++.++..  +++|.++..
T Consensus       256 vvid~~G~~--------~~~~~~~~~l~~~--G~vv~~G~~  286 (370)
T 4ej6_A          256 VVIECAGVA--------ETVKQSTRLAKAG--GTVVILGVL  286 (370)
T ss_dssp             EEEECSCCH--------HHHHHHHHHEEEE--EEEEECSCC
T ss_pred             EEEECCCCH--------HHHHHHHHHhccC--CEEEEEecc
Confidence            999998731        1124455555444  488887654

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=97.18  E-value=0.0021  Score=55.20  Aligned_cols=70  Identities=14%  Similarity=0.205  Sum_probs=53.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|+|.|.| .|.||+.+++.|...|.+|++.+|++....        .+..+.    . .+++.+++.+ +|+|+.
T Consensus       135 ~~l~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~--------~~~~~~----~-~~~l~ell~~-aDiV~l  199 (315)
T 3pp8_A          135 YTREEFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSWP--------GVESYV----G-REELRAFLNQ-TRVLIN  199 (315)
T ss_dssp             CCSTTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCCT--------TCEEEE----S-HHHHHHHHHT-CSEEEE
T ss_pred             CCcCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhhh--------hhhhhc----c-cCCHHHHHhh-CCEEEE
Confidence            456799999999 599999999999999999999999875421        222211    1 3567788888 999998


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +....
T Consensus       200 ~~Plt  204 (315)
T 3pp8_A          200 LLPNT  204 (315)
T ss_dssp             CCCCC
T ss_pred             ecCCc
Confidence            77543

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=97.18  E-value=0.00076  Score=58.81  Aligned_cols=100  Identities=14%  Similarity=0.091  Sum_probs=67.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|+|.|+| .|.||+.+++.|...|.+|++.+|++........   .++..        .+++.+++.+ +|+|+.
T Consensus       160 ~~l~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~---~g~~~--------~~~l~ell~~-aDvV~l  226 (351)
T 3jtm_A          160 YDLEGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE---TGAKF--------VEDLNEMLPK-CDVIVI  226 (351)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH---HCCEE--------CSCHHHHGGG-CSEEEE
T ss_pred             ccccCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh---CCCeE--------cCCHHHHHhc-CCEEEE
Confidence            467899999999 5999999999999999999999987643322111   12221        1236777888 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +............   ...++.|+..  .-||.+|...
T Consensus       227 ~~Plt~~t~~li~---~~~l~~mk~g--ailIN~aRG~  259 (351)
T 3jtm_A          227 NMPLTEKTRGMFN---KELIGKLKKG--VLIVNNARGA  259 (351)
T ss_dssp             CSCCCTTTTTCBS---HHHHHHSCTT--EEEEECSCGG
T ss_pred             CCCCCHHHHHhhc---HHHHhcCCCC--CEEEECcCch
Confidence            8765443332222   4455666543  3688887753

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.00066  Score=60.02  Aligned_cols=98  Identities=13%  Similarity=0.085  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccC---CCh---HHHHHHhcC-CC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT---EGS---AKLSEAIGD-DS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~---d~~---~~~~~~~~~-~~  136 (296)
                      .+.+|||+| +|.+|...++.+...| .+|+++++++++.+....   -++..+ .|..   + .   +.+.+...+ .+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~---lGa~~v-i~~~~~~~-~~~~~~v~~~~~g~g~  268 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE---IGADLT-LNRRETSV-EERRKAIMDITHGRGA  268 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH---TTCSEE-EETTTSCH-HHHHHHHHHHTTTSCE
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH---cCCcEE-EeccccCc-chHHHHHHHHhCCCCC
Confidence            468999999 8999999999888899 699999998877654332   122221 2433   2 2   233343332 49


Q ss_pred             CEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          137 EAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |+||.++|...        .....++.++..  +++|.++..
T Consensus       269 Dvvid~~g~~~--------~~~~~~~~l~~~--G~iv~~G~~  300 (380)
T 1vj0_A          269 DFILEATGDSR--------ALLEGSELLRRG--GFYSVAGVA  300 (380)
T ss_dssp             EEEEECSSCTT--------HHHHHHHHEEEE--EEEEECCCC
T ss_pred             cEEEECCCCHH--------HHHHHHHHHhcC--CEEEEEecC
Confidence            99999998421        113455555544  488887764

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.16  E-value=0.00084  Score=58.82  Aligned_cols=75  Identities=17%  Similarity=0.090  Sum_probs=53.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCCh--HHHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGS--AKLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~--~~~~~~~~~-~~d~vv  140 (296)
                      .+.+|||+|| |.+|...++.+... |++|+++++++++.+....   -+.+.+ .|..+ .  +.+.+.-.+ .+|+||
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~---lGa~~v-i~~~~-~~~~~v~~~~~g~g~Dvvi  259 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER---LGADHV-VDARR-DPVKQVMELTRGRGVNVAM  259 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH---TTCSEE-EETTS-CHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH---hCCCEE-Eeccc-hHHHHHHHHhCCCCCcEEE
Confidence            4789999999 99999999988888 9999999998876654332   122221 35555 3  444444332 499999


Q ss_pred             EcCCC
Q 022495          141 CATGF  145 (296)
Q Consensus       141 ~~ag~  145 (296)
                      .++|.
T Consensus       260 d~~G~  264 (359)
T 1h2b_A          260 DFVGS  264 (359)
T ss_dssp             ESSCC
T ss_pred             ECCCC
Confidence            99984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.16  E-value=0.0004  Score=58.80  Aligned_cols=39  Identities=31%  Similarity=0.321  Sum_probs=34.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT  105 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~  105 (296)
                      .++|.|+|+ |.+|..+++.|++.|++|++.+|+++....
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~   42 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDA   42 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence            578999985 999999999999999999999999876543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.16  E-value=0.00031  Score=60.85  Aligned_cols=100  Identities=21%  Similarity=0.138  Sum_probs=62.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcc---cC------CCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTL---SK------DNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~---~~------~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      .++|.|+|| |.+|..++..|+..|+ +|++.+++++.++...   ..      ...++...    +|    . +++++ 
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d----~-~al~~-   82 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE----NN----Y-EYLQN-   82 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE----SC----G-GGGTT-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC----CC----H-HHHCC-
Confidence            468999998 9999999999999998 9999999987655211   00      01122211    22    2 45778 


Q ss_pred             CCEEEEcCCCCCCCCCc--c--hhHH---HHHHHHHHHcCCC-EEEEEc
Q 022495          136 SEAVVCATGFQPGWDLF--A--PWKA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~--~--~~~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      +|+||.++|........  +  ..+.   +.+++.+.+.... .+|++|
T Consensus        83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999999865432211  1  1111   6667766665433 444444

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.15  E-value=0.0011  Score=58.58  Aligned_cols=104  Identities=15%  Similarity=0.172  Sum_probs=68.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcc----------------cCCC----
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKAD----------------VTEG----  124 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D----------------~~d~----  124 (296)
                      .+.+|+|+|+ |-+|...++.+...|++|++.++++.+.+....   -+.+++..+                +++.    
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~---~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~  264 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS---LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVK  264 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH---TTCEECCCCC-----------------CHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---cCCceeecccccccccccccchhhhcchhhhhh
Confidence            5689999997 999999999999999999999999877554332   123333322                2220    


Q ss_pred             -hHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          125 -SAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       125 -~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                       .+.+.+.+++ .|+||.++.+.....+...  .+..++.|+..  .-||-+|.
T Consensus       265 ~~~~l~e~l~~-aDVVI~tvlipg~~ap~Lv--t~emv~~Mk~G--sVIVDvA~  313 (405)
T 4dio_A          265 QAALVAEHIAK-QDIVITTALIPGRPAPRLV--TREMLDSMKPG--SVVVDLAV  313 (405)
T ss_dssp             HHHHHHHHHHT-CSEEEECCCCSSSCCCCCB--CHHHHTTSCTT--CEEEETTG
T ss_pred             hHhHHHHHhcC-CCEEEECCcCCCCCCCEEe--cHHHHhcCCCC--CEEEEEeC
Confidence             2467788888 9999999865543222111  14566666532  24666665

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=97.14  E-value=0.0053  Score=55.55  Aligned_cols=90  Identities=14%  Similarity=0.213  Sum_probs=64.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-hhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      .++++|+|+|.|| |-+|...++.|++.|++|++++.+.... .++.  ...+++++..+..+ .+     +.+ +|.||
T Consensus         8 ~~l~~~~vlVvGg-G~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~--~~~~i~~~~~~~~~-~~-----l~~-~~lVi   77 (457)
T 1pjq_A            8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWA--NEGMLTLVEGPFDE-TL-----LDS-CWLAI   77 (457)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHH--TTTSCEEEESSCCG-GG-----GTT-CSEEE
T ss_pred             EECCCCEEEEECC-CHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHH--hcCCEEEEECCCCc-cc-----cCC-ccEEE
Confidence            3567899999996 9999999999999999999998764332 2222  22568888877654 22     456 89888


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                      -+.+.        ......+.+.|++.++
T Consensus        78 ~at~~--------~~~n~~i~~~a~~~~i   98 (457)
T 1pjq_A           78 AATDD--------DTVNQRVSDAAESRRI   98 (457)
T ss_dssp             ECCSC--------HHHHHHHHHHHHHTTC
T ss_pred             EcCCC--------HHHHHHHHHHHHHcCC
Confidence            76542        1123667788888774

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.13  E-value=0.0023  Score=54.83  Aligned_cols=97  Identities=13%  Similarity=0.096  Sum_probs=64.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+++|.|+| .|.||+.+++.|...|.+|++.+|++++.. ...   .++.+     .+    +.+++.+ +|+|+.
T Consensus       138 ~~l~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~---~g~~~-----~~----l~ell~~-aDvV~l  202 (307)
T 1wwk_A          138 IELEGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNEER-AKE---VNGKF-----VD----LETLLKE-SDVVTI  202 (307)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HHH---TTCEE-----CC----HHHHHHH-CSEEEE
T ss_pred             cccCCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCChhh-Hhh---cCccc-----cC----HHHHHhh-CCEEEE
Confidence            357789999998 599999999999999999999999876521 111   23322     13    3455666 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +............   ...++.++..  ..+|.+|+.
T Consensus       203 ~~p~~~~t~~li~---~~~l~~mk~g--a~lin~arg  234 (307)
T 1wwk_A          203 HVPLVESTYHLIN---EERLKLMKKT--AILINTSRG  234 (307)
T ss_dssp             CCCCSTTTTTCBC---HHHHHHSCTT--CEEEECSCG
T ss_pred             ecCCChHHhhhcC---HHHHhcCCCC--eEEEECCCC
Confidence            8765443222211   3345555443  368888874

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.13  E-value=0.0015  Score=58.15  Aligned_cols=70  Identities=17%  Similarity=0.184  Sum_probs=54.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++|+|+|| |.+|+.+++.+.+.|++|++++ .+........   .....+.+|..| .+.+.++.+. +|+++.
T Consensus        23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a---d~~~~~~~~~~d-~~~l~~~a~~-~d~i~~   92 (403)
T 3k5i_A           23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS---AHDGHVTGSFKE-REAVRQLAKT-CDVVTA   92 (403)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC---CSSCCEESCTTC-HHHHHHHHTT-CSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc---cccceeecCCCC-HHHHHHHHHh-CCEEEE
Confidence            4689999996 8999999999999999999998 5433222221   222457789999 8999999988 998874

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=97.13  E-value=0.0012  Score=57.15  Aligned_cols=93  Identities=16%  Similarity=0.162  Sum_probs=62.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|+|.|+|. |.||+.+++.|...|.+|++.+|+++...        ++..    ..+    +.+++.+ +|+|+.+
T Consensus       161 ~l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~dr~~~~~~--------g~~~----~~~----l~ell~~-aDvVil~  222 (333)
T 3ba1_A          161 KFSGKRVGIIGL-GRIGLAVAERAEAFDCPISYFSRSKKPNT--------NYTY----YGS----VVELASN-SDILVVA  222 (333)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEECSSCCTTC--------CSEE----ESC----HHHHHHT-CSEEEEC
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCchhcc--------Ccee----cCC----HHHHHhc-CCEEEEe
Confidence            567899999985 99999999999999999999998875421        2211    123    4566777 9999988


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ............   ...++.++..  .-||.+|+.
T Consensus       223 vP~~~~t~~li~---~~~l~~mk~g--ailIn~srG  253 (333)
T 3ba1_A          223 CPLTPETTHIIN---REVIDALGPK--GVLINIGRG  253 (333)
T ss_dssp             SCCCGGGTTCBC---HHHHHHHCTT--CEEEECSCG
T ss_pred             cCCChHHHHHhh---HHHHhcCCCC--CEEEECCCC
Confidence            754322111111   3455555432  357777764

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.13  E-value=0.0018  Score=56.95  Aligned_cols=100  Identities=18%  Similarity=0.073  Sum_probs=62.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC----ChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE----GSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d----~~~~~~~~~~~~~d~v  139 (296)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++++.+....   -++..+ .|..+    ..+.+.+...+.+|+|
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~---lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~v  266 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV---FGATDF-VNPNDHSEPISQVLSKMTNGGVDFS  266 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---TTCCEE-ECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH---hCCceE-EeccccchhHHHHHHHHhCCCCCEE
Confidence            4689999995 9999999998888998 79999888877654332   122222 24332    0123333332239999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |.++|..        ......++.++.. .+++|.++..
T Consensus       267 id~~g~~--------~~~~~~~~~l~~~-~G~iv~~G~~  296 (374)
T 1cdo_A          267 LECVGNV--------GVMRNALESCLKG-WGVSVLVGWT  296 (374)
T ss_dssp             EECSCCH--------HHHHHHHHTBCTT-TCEEEECSCC
T ss_pred             EECCCCH--------HHHHHHHHHhhcC-CcEEEEEcCC
Confidence            9999741        1113444444433 1589988754

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=97.12  E-value=0.0011  Score=56.84  Aligned_cols=91  Identities=15%  Similarity=0.162  Sum_probs=61.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|.|+| .|.||+.+++.|...|.+|++.+|++++.         .     .+..    ++.+++.+ +|+|+.+
T Consensus       141 ~l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---------~-----~~~~----~l~ell~~-aDvV~l~  200 (311)
T 2cuk_A          141 DLQGLTLGLVG-MGRIGQAVAKRALAFGMRVVYHARTPKPL---------P-----YPFL----SLEELLKE-ADVVSLH  200 (311)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSS---------S-----SCBC----CHHHHHHH-CSEEEEC
T ss_pred             CCCCCEEEEEE-ECHHHHHHHHHHHHCCCEEEEECCCCccc---------c-----cccC----CHHHHHhh-CCEEEEe
Confidence            57789999998 59999999999999999999988876542         1     2222    35566777 9999988


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ............   ...++.++..  ..+|.+|+.
T Consensus       201 ~p~~~~t~~li~---~~~l~~mk~g--a~lin~srg  231 (311)
T 2cuk_A          201 TPLTPETHRLLN---RERLFAMKRG--AILLNTARG  231 (311)
T ss_dssp             CCCCTTTTTCBC---HHHHTTSCTT--CEEEECSCG
T ss_pred             CCCChHHHhhcC---HHHHhhCCCC--cEEEECCCC
Confidence            755432222211   2344444332  368888874

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=97.12  E-value=0.0014  Score=56.94  Aligned_cols=95  Identities=17%  Similarity=0.119  Sum_probs=61.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|+|.|+|. |.||+.+++.|...|.+|++.+|++...        ..+..        ..++.+++++ +|+|+.
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~--------~~~~~--------~~sl~ell~~-aDvVil  228 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTLSG--------VDWIA--------HQSPVDLARD-SDVLAV  228 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCTT--------SCCEE--------CSSHHHHHHT-CSEEEE
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcccc--------cCcee--------cCCHHHHHhc-CCEEEE
Confidence            4678999999995 9999999999999999999999886541        11111        1236667788 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +............   ...++.|+..  .-||.+|...
T Consensus       229 ~vP~t~~t~~li~---~~~l~~mk~g--ailIN~aRG~  261 (340)
T 4dgs_A          229 CVAASAATQNIVD---ASLLQALGPE--GIVVNVARGN  261 (340)
T ss_dssp             CC----------C---HHHHHHTTTT--CEEEECSCC-
T ss_pred             eCCCCHHHHHHhh---HHHHhcCCCC--CEEEECCCCc
Confidence            7753322211111   3455555543  3688887753

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.12  E-value=0.0047  Score=53.00  Aligned_cols=73  Identities=19%  Similarity=0.291  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhh--c-cc-C--CCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKT--T-LS-K--DNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~-~~-~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      .|+|.|+|+ |.+|..++..|++.|+  +|++++|++++...  . +. .  ......+...  .| .    +.+++ +|
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~-~----~~~~~-aD   77 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DD-P----EICRD-AD   77 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SC-G----GGGTT-CS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CC-H----HHhCC-CC
Confidence            479999998 9999999999999998  99999998755431  1 11 0  0012222211  12 2    23567 99


Q ss_pred             EEEEcCCCCC
Q 022495          138 AVVCATGFQP  147 (296)
Q Consensus       138 ~vv~~ag~~~  147 (296)
                      +||.+++...
T Consensus        78 ~Vii~v~~~~   87 (319)
T 1lld_A           78 MVVITAGPRQ   87 (319)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCCCCC
Confidence            9999997543

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=97.11  E-value=0.0026  Score=54.74  Aligned_cols=71  Identities=18%  Similarity=0.246  Sum_probs=53.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+++|.|+| .|.||+.+++.|...|.+|++.+|++.....        +...    .. ..++.+++.+ +|+|+.
T Consensus       136 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--------~~~~----~~-~~~l~ell~~-aDvV~l  200 (324)
T 3hg7_A          136 QGLKGRTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRERAG--------FDQV----YQ-LPALNKMLAQ-ADVIVS  200 (324)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCTT--------CSEE----EC-GGGHHHHHHT-CSEEEE
T ss_pred             cccccceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHhhh--------hhcc----cc-cCCHHHHHhh-CCEEEE
Confidence            357799999999 5999999999999999999999988743211        1111    12 3457778888 999998


Q ss_pred             cCCCCC
Q 022495          142 ATGFQP  147 (296)
Q Consensus       142 ~ag~~~  147 (296)
                      +.....
T Consensus       201 ~lPlt~  206 (324)
T 3hg7_A          201 VLPATR  206 (324)
T ss_dssp             CCCCCS
T ss_pred             eCCCCH
Confidence            776443

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.11  E-value=0.0028  Score=47.49  Aligned_cols=87  Identities=22%  Similarity=0.357  Sum_probs=56.4

Q ss_pred             CCCeEEEEcCC---chHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGAT---GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +.++|.|+|++   |.+|..+++.|++.|++|+....+.+.   .     .++..+ .+       +.++... +|+++-
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~---i-----~G~~~~-~s-------~~el~~~-vDlvii   75 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE---I-----EGLKCY-RS-------VRELPKD-VDVIVF   75 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---E-----TTEECB-SS-------GGGSCTT-CCEEEE
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe---E-----CCeeec-CC-------HHHhCCC-CCEEEE
Confidence            35789999997   899999999999999986655444211   1     122211 12       2333345 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +..         ......+++.+.+.|++.++..++
T Consensus        76 ~vp---------~~~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           76 VVP---------PKVGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             CSC---------HHHHHHHHHHHHHTTCCEEEECTT
T ss_pred             EeC---------HHHHHHHHHHHHHcCCCEEEEcCc
Confidence            753         122356677777788887776654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.11  E-value=0.0012  Score=58.01  Aligned_cols=99  Identities=14%  Similarity=0.114  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccC--CChHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT--EGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--d~~~~~~~~~~~-~~d~vv~  141 (296)
                      .+++|||+| +|.+|...++.+...|++|+++++++++.+....   -+++.+ .|-.  |..+.+.+...+ .+|+||.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~---lGa~~v-i~~~~~~~~~~v~~~~~g~g~D~vid  263 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA---LGADHG-INRLEEDWVERVYALTGDRGADHILE  263 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HTCSEE-EETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH---cCCCEE-EcCCcccHHHHHHHHhCCCCceEEEE
Confidence            468999999 8999999999998899999999998876654322   122221 2321  212344444443 4999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ++|..    .     ....++.++..  +++|.++...
T Consensus       264 ~~g~~----~-----~~~~~~~l~~~--G~iv~~G~~~  290 (363)
T 3uog_A          264 IAGGA----G-----LGQSLKAVAPD--GRISVIGVLE  290 (363)
T ss_dssp             ETTSS----C-----HHHHHHHEEEE--EEEEEECCCS
T ss_pred             CCChH----H-----HHHHHHHhhcC--CEEEEEecCC
Confidence            99821    1     13455555554  4899887653

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.11  E-value=0.0022  Score=56.39  Aligned_cols=100  Identities=12%  Similarity=0.087  Sum_probs=62.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC----ChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE----GSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d----~~~~~~~~~~~~~d~v  139 (296)
                      .+.+|||+|+ |.+|..+++.+...|. +|+++++++++.+....   -++..+ .|..+    ..+.+.+...+.+|+|
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~---lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~v  265 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE---VGATEC-VNPQDYKKPIQEVLTEMSNGGVDFS  265 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---TTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH---hCCceE-ecccccchhHHHHHHHHhCCCCcEE
Confidence            4689999995 9999999998888998 79999988877654322   122221 23332    0123333322239999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |.++|..        ......++.++.. .+++|.++..
T Consensus       266 id~~g~~--------~~~~~~~~~l~~~-~G~iv~~G~~  295 (374)
T 2jhf_A          266 FEVIGRL--------DTMVTALSCCQEA-YGVSVIVGVP  295 (374)
T ss_dssp             EECSCCH--------HHHHHHHHHBCTT-TCEEEECSCC
T ss_pred             EECCCCH--------HHHHHHHHHhhcC-CcEEEEeccC
Confidence            9999741        1113444544443 1489887653

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.10  E-value=0.00048  Score=59.18  Aligned_cols=101  Identities=16%  Similarity=0.110  Sum_probs=61.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCcchhhhcc---cCC----CCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDKAKTTL---SKD----NPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~---~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      |+|.|+|+ |.+|..++..|++.  |++|+++++++++.+...   ...    .....+..  .+| .   .+ +++ +|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d-~---~~-l~~-aD   71 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG--SND-Y---AD-TAN-SD   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE--ESC-G---GG-GTT-CS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE--CCC-H---HH-HCC-CC
Confidence            47999998 99999999999985  789999999987655321   100    01111111  023 2   22 677 99


Q ss_pred             EEEEcCCCCCCCCCcchh----HH---HHHHHHHHHcCC-CEEEEEc
Q 022495          138 AVVCATGFQPGWDLFAPW----KA---INLVEACRKRGV-NRFILIS  176 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~~-~~iV~~S  176 (296)
                      +||.+++...........    +.   +.+++.+.+... ..+|.++
T Consensus        72 vViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           72 IVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            999999865432221111    11   566666666542 3555553

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.09  E-value=0.00042  Score=60.38  Aligned_cols=99  Identities=13%  Similarity=0.167  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      .+.+|||+|+ |.+|...++.+...  |++|+++++++++.+....   -+...+ .|..+..+.+.+.-++ .+|+||.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~---lGa~~v-i~~~~~~~~~~~~~~g~g~D~vid  244 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE---LGADYV-SEMKDAESLINKLTDGLGASIAID  244 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH---HTCSEE-ECHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH---hCCCEE-eccccchHHHHHhhcCCCccEEEE
Confidence            6789999999 99999999988888  9999999988876553321   112211 2322101122333222 3999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ++|..        ......++.++..  +++|.++..
T Consensus       245 ~~g~~--------~~~~~~~~~l~~~--G~iv~~g~~  271 (344)
T 2h6e_A          245 LVGTE--------ETTYNLGKLLAQE--GAIILVGME  271 (344)
T ss_dssp             SSCCH--------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             CCCCh--------HHHHHHHHHhhcC--CEEEEeCCC
Confidence            99841        1224455555544  488887654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.08  E-value=0.00062  Score=59.37  Aligned_cols=92  Identities=20%  Similarity=0.197  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++++.+.... .  +...+.   .+ .+.+.+   + +|+||.++|
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l--Ga~~v~---~~-~~~~~~---~-~D~vid~~g  243 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-M--GVKHFY---TD-PKQCKE---E-LDFIISTIP  243 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-T--TCSEEE---SS-GGGCCS---C-EEEEEECCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-c--CCCeec---CC-HHHHhc---C-CCEEEECCC
Confidence            5789999997 999999999888899999999998877664432 1  222222   34 343332   6 999999988


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ....        ....++.++..  +++|.++..
T Consensus       244 ~~~~--------~~~~~~~l~~~--G~iv~~G~~  267 (348)
T 3two_A          244 THYD--------LKDYLKLLTYN--GDLALVGLP  267 (348)
T ss_dssp             SCCC--------HHHHHTTEEEE--EEEEECCCC
T ss_pred             cHHH--------HHHHHHHHhcC--CEEEEECCC
Confidence            4311        13344444443  488887654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.08  E-value=0.0022  Score=56.50  Aligned_cols=99  Identities=11%  Similarity=0.000  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC----ChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE----GSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d----~~~~~~~~~~~~~d~v  139 (296)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+....   -++..+ .|..+    ..+.+.+...+.+|+|
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~---lGa~~v-i~~~~~~~~~~~~v~~~~~~g~Dvv  269 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA---LGATDC-LNPRELDKPVQDVITELTAGGVDYS  269 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---TTCSEE-ECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH---hCCcEE-EccccccchHHHHHHHHhCCCccEE
Confidence            4689999996 9999999998888998 79999888877654332   122221 23332    0123333332239999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |.++|..        ......++.++.. .+++|.++.
T Consensus       270 id~~G~~--------~~~~~~~~~l~~~-~G~iv~~G~  298 (376)
T 1e3i_A          270 LDCAGTA--------QTLKAAVDCTVLG-WGSCTVVGA  298 (376)
T ss_dssp             EESSCCH--------HHHHHHHHTBCTT-TCEEEECCC
T ss_pred             EECCCCH--------HHHHHHHHHhhcC-CCEEEEECC
Confidence            9999741        1113344444433 148988775

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.08  E-value=0.0012  Score=59.14  Aligned_cols=70  Identities=20%  Similarity=0.203  Sum_probs=55.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +.+++|+|.|+ |.+|+.+++.+.+.|++|++++.++........     -..+..|+.| .+.+.++..+ +|+|+.
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a-----d~~~~~~~~d-~~~l~~~a~~-~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA-----DRHLRAAYDD-EAALAELAGL-CEAVST  102 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS-----SEEECCCTTC-HHHHHHHHHH-CSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC-----CEEEECCcCC-HHHHHHHHhc-CCEEEE
Confidence            45789999996 899999999999999999998766543322221     1456689999 8999998887 999984

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.07  E-value=0.00048  Score=59.39  Aligned_cols=73  Identities=14%  Similarity=0.116  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+.+|+|+||+|.+|...++.+...|++|+++.++. +.+....   -++.. ..|..+ .+.+.+.+.+ +|++|.++|
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~---lGa~~-~i~~~~-~~~~~~~~~g-~D~v~d~~g  224 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKA---LGAEQ-CINYHE-EDFLLAISTP-VDAVIDLVG  224 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHH---HTCSE-EEETTT-SCHHHHCCSC-EEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHH---cCCCE-EEeCCC-cchhhhhccC-CCEEEECCC
Confidence            578999999999999999999999999999887543 3222111   12221 236665 4446666677 999999987

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.06  E-value=0.0012  Score=58.52  Aligned_cols=104  Identities=12%  Similarity=0.130  Sum_probs=64.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccC--------------------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVT--------------------  122 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--------------------  122 (296)
                      .+.+++|+|+|+ |.+|..+++.+...|.+|++.+|++.+......   -+.+++..|..                    
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~---~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~  244 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES---LGGKFITVDDEAMKTAETAGGYAKEMGEEFR  244 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH---TTCEECCC-----------------------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---cCCeEEeecccccccccccccchhhcCHHHH
Confidence            456899999996 999999999999999999999998876543321   12233211211                    


Q ss_pred             --CChHHHHHHhcCCCCEEEEcCCCCCCCC-CcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          123 --EGSAKLSEAIGDDSEAVVCATGFQPGWD-LFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       123 --d~~~~~~~~~~~~~d~vv~~ag~~~~~~-~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                        + .+.+.+.+.+ .|+||+++....... ....   ...++.|+..  ..||.++.
T Consensus       245 ~~~-~~~l~~~~~~-aDvVi~~~~~pg~~~~~li~---~~~l~~mk~g--~vivdva~  295 (384)
T 1l7d_A          245 KKQ-AEAVLKELVK-TDIAITTALIPGKPAPVLIT---EEMVTKMKPG--SVIIDLAV  295 (384)
T ss_dssp             CCH-HHHHHHHHTT-CSEEEECCCCTTSCCCCCSC---HHHHTTSCTT--CEEEETTG
T ss_pred             hhh-HHHHHHHhCC-CCEEEECCccCCCCCCeeeC---HHHHhcCCCC--CEEEEEec
Confidence              1 2336777888 999999884322111 1111   3345555432  36777774

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.06  E-value=0.0019  Score=55.64  Aligned_cols=100  Identities=19%  Similarity=0.168  Sum_probs=61.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcccC------CCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSK------DNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      |+|.|+|+ |.+|..++..|++.|+  +|+++++++++.......      ......+..   +| .    +.+++ +|+
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d-~----~~~~~-aDv   70 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GD-Y----ADLKG-SDV   70 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CC-G----GGGTT-CSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CC-H----HHhCC-CCE
Confidence            47999998 9999999999999998  999999987655432110      001122221   23 2    23677 999


Q ss_pred             EEEcCCCCCCCCCcchh----H---HHHHHHHHHHcCCC-EEEEEc
Q 022495          139 VVCATGFQPGWDLFAPW----K---AINLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~----~---~~~~l~~~~~~~~~-~iV~~S  176 (296)
                      ||.+++...........    +   .+.+++.+.+.... .+|.+|
T Consensus        71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99999864422111111    1   16666666665433 455543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.06  E-value=0.0011  Score=56.79  Aligned_cols=42  Identities=29%  Similarity=0.375  Sum_probs=36.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL  107 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~  107 (296)
                      ++|+|.|+| .|.+|..+++.|++.|++|++.+|++++...+.
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~   61 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV   61 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            468999998 599999999999999999999999988766543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=97.04  E-value=0.0022  Score=56.91  Aligned_cols=106  Identities=16%  Similarity=0.216  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC--C-hHHHHHHhcC-CCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--G-SAKLSEAIGD-DSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~-~~~~~~~~~~-~~d~v  139 (296)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++++.+....   -+++.  .|..+  . .+.+.+...+ .+|+|
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~---lGa~~--i~~~~~~~~~~~~~~~~~g~g~Dvv  258 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD---AGFET--IDLRNSAPLRDQIDQILGKPEVDCG  258 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT---TTCEE--EETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH---cCCcE--EcCCCcchHHHHHHHHhCCCCCCEE
Confidence            4789999996 9999999988888898 89999999877654432   23443  35544  1 2334444433 49999


Q ss_pred             EEcCCCCCCCC-----C-cchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          140 VCATGFQPGWD-----L-FAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       140 v~~ag~~~~~~-----~-~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |.++|......     . .........++.++..  +++|.++..
T Consensus       259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--G~iv~~G~~  301 (398)
T 2dph_A          259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG--GAIGIPGIY  301 (398)
T ss_dssp             EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE--EEEECCSCC
T ss_pred             EECCCCccccccccccccccHHHHHHHHHHHhcC--CEEEEeccc
Confidence            99998532000     0 0011224455555544  488877653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	296
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-28
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	6e-18
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-17
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	5e-16
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-13
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	7e-13
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-12
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	3e-12
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-11
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-10
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	4e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-09
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-09
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-08
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-08
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-08
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	3e-07
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	4e-07
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-06
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-06
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	7e-06
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-05
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-05
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-05
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-05
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	6e-05
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	5e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.001
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.003

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 1e-28
 Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 15/211 (7%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           KKI + GATG +G   + Q +  G+ V   VRD  +                       A
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-----SEGPRPAHVVVGDVLQA 58

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAP--WKAINLVEACRKRGVNRFILISSILVNGAA 184
              +      +AV+   G +            A N+V A +  GV++ +  +S  +    
Sbjct: 59  ADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDP 118

Query: 185 MGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDT 244
                    +            ++  + +R+SG+ Y  + P  + ++P TG   +  +  
Sbjct: 119 TKVPPRLQAVT--------DDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGR 170

Query: 245 LYEGTISRDQVAEVAVEALLHPESSYKVVEI 275
                IS+  +    +  L   E        
Sbjct: 171 GPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 80.5 bits (197), Expect = 6e-18
 Identities = 32/246 (13%), Positives = 67/246 (27%), Gaps = 25/246 (10%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
           ++K I V GATG  G  ++    A G  V+A V  L        +  P++ + +  +   
Sbjct: 2   QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 61

Query: 125 SAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAA 184
              +         A +  T               +L +A ++ G  +  + SS+  +   
Sbjct: 62  VPLMDTLFEGAHLAFINTTSQAGDEI----AIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117

Query: 185 MGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGI--NYTIIRPGGLRNEPPTGN----II 238
                 P +         +        ++       N+T +     + E           
Sbjct: 118 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 177

Query: 239 METEDTLYEGTISRDQVAEVAVEALLHPESSYK---------------VVEIISRVDAPK 283
               D       +   V    ++        +                V    SR    +
Sbjct: 178 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRR 237

Query: 284 RSYEDL 289
            +Y  +
Sbjct: 238 VTYVQV 243

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 79.0 bits (193), Expect = 1e-17
 Identities = 44/249 (17%), Positives = 86/249 (34%), Gaps = 31/249 (12%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-----LDKAKTTLSKDNPSLQIVKA 119
           K+ ++ + G TG  GKRIV   ++ G       R      +DK +  L       ++++A
Sbjct: 2   KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 61

Query: 120 DVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL 179
            + +    +      D      A G      L        LVEA ++ G  +  L S   
Sbjct: 62  SLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLK----LVEAIKEAGNIKRFLPSEFG 117

Query: 180 VNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG------------- 226
           ++   M   L P  I         I K +  + I  + I YT +                
Sbjct: 118 MDPDIMEHALQPGSIT-------FIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQL 170

Query: 227 GLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSY 286
                PP   +++  +  +    +  D V    ++++  P++  K + I         S 
Sbjct: 171 DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRP--PMNILSQ 228

Query: 287 EDLFGSIKQ 295
           +++    ++
Sbjct: 229 KEVIQIWER 237

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 73.7 bits (179), Expect = 5e-16
 Identities = 52/251 (20%), Positives = 93/251 (37%), Gaps = 24/251 (9%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
             + V GA+G +G+ + ++L           + L ++     K      +   D+T+ + 
Sbjct: 4   PTVLVTGASGRTGQIVYKKLKEGSDKFV--AKGLVRSAQGKEKIGGEADVFIGDITD-AD 60

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
            ++ A       V+  +        F P K                +          A  
Sbjct: 61  SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 120

Query: 187 QILNPAYIFLNVFGLT--------------LIAKLQAEQYIRKSGINYTIIRPGGLRNEP 232
                  + +   G T              L+ K +AEQY+  SG  YTIIR GGL ++ 
Sbjct: 121 VAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKE 180

Query: 233 PTG-NIIMETEDTLYE---GTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYED 288
                +++  +D L +    T+ R  VAEV ++ALL  E+  K  ++ S+ +      +D
Sbjct: 181 GGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKD 240

Query: 289 ---LFGSIKQR 296
              LF  +  R
Sbjct: 241 FKALFSQVTSR 251

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 67.9 bits (165), Expect = 1e-13
 Identities = 36/178 (20%), Positives = 58/178 (32%), Gaps = 19/178 (10%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAG--VRDLDKAKTTLSKDN-------PSLQIVK 118
           ++ V G  G  G   V QLLA  +       V  LD      ++ N       P L+ V 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 119 ADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFA-------PWKAINLVEACRKRGVNR 171
            D+ +      E  G D+     A          A             L++     GV R
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121

Query: 172 FILISSILVNGAAMGQILNPAYIF--LNVFGLT-LIAKLQAEQYIRKSGINYTIIRPG 226
            + +S+  V G+        +      + +  +   + L A  Y R  G++  I R  
Sbjct: 122 VVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCC 179

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 7e-13
 Identities = 32/193 (16%), Positives = 66/193 (34%), Gaps = 28/193 (14%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEG 124
           K+I + G  G  G  + ++L+  G  V          K  +     + + +++  DV E 
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 61

Query: 125 SAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAI--------NLVEACRKRGVNRFILIS 176
                + I         A+   P   ++ P K +        N++   ++ G  R +L S
Sbjct: 62  LYIEVDQI------YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 114

Query: 177 SILVNGAAMGQILNPAYIF-------LNVFGLT-LIAKLQAEQYIRKSGINYTIIRPG-- 226
           +  V G       +  Y            +     +A+     Y+++ G+   + R    
Sbjct: 115 TSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNT 174

Query: 227 -GLRNEPPTGNII 238
            G R     G ++
Sbjct: 175 FGPRMHMNDGRVV 187

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 64.1 bits (155), Expect = 3e-12
 Identities = 33/183 (18%), Positives = 51/183 (27%), Gaps = 23/183 (12%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD--------LDKAKTTLSKDNPSLQIVK 118
           K   + G TG  G  + E LL KG+ V    R         +D         NP   +  
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 119 ADVTEGSAKLSEAIGDDSEAVVCATGFQ-PGWDLFAPWKAI--------NLVEACRKRGV 169
            D+++ S           + V              +P             L+EA R  G+
Sbjct: 62  GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGL 121

Query: 170 N---RFILISSILVNGAAMGQILNPAYIF--LNVFGLT-LIAKLQAEQYIRKSGINYTII 223
               RF   S+  + G            F   + + +  L A      Y    G+     
Sbjct: 122 EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNG 181

Query: 224 RPG 226
              
Sbjct: 182 ILF 184

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 63.4 bits (153), Expect = 3e-12
 Identities = 25/175 (14%), Positives = 51/175 (29%), Gaps = 29/175 (16%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAV-------KAGVRDLDKAKTTLSKDNPSLQIVKA 119
           +++F+AG  G  G  I  QL  +G          +  + D        + +      + A
Sbjct: 3   QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAA 62

Query: 120 DVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL 179
               G    +    D     +                  N++ A  +  VN+ + + S  
Sbjct: 63  AKVGGIVANNTYPADFIYQNMMIE--------------SNIIHAAHQNDVNKLLFLGSSC 108

Query: 180 VNGAAMGQILN-------PAYIFLNVFGLT-LIAKLQAEQYIRKSGINYTIIRPG 226
           +      Q +                + +  +      E Y R+ G +Y  + P 
Sbjct: 109 IYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 163

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 61.1 bits (147), Expect = 3e-11
 Identities = 36/186 (19%), Positives = 55/186 (29%), Gaps = 17/186 (9%)

Query: 57  EAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQI 116
           E E+    +  KI + GA G     I  +L  +G  V            T         +
Sbjct: 6   EREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVI-ASDWKKNEHMTEDMFCDEFHL 64

Query: 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAIN------LVEACRKRGVN 170
           V   V E   K++E +           G        +     N      ++EA R  G+ 
Sbjct: 65  VDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIK 124

Query: 171 RFILISSILVNGAAMGQILNPAYIF---------LNVFGLT-LIAKLQAEQYIRKSGINY 220
           RF   SS  +             +           + FGL  L  +   + Y +  GI  
Sbjct: 125 RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIEC 184

Query: 221 TIIRPG 226
            I R  
Sbjct: 185 RIGRFH 190

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 58.2 bits (140), Expect = 2e-10
 Identities = 33/197 (16%), Positives = 56/197 (28%), Gaps = 37/197 (18%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTE 123
           KI + G  G  G  +V  ++         +  L  A    S     ++       AD+ +
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 124 GSAKLSEAIGDDSEAVV--CATGFQPGWDLFAPWKAI--------NLVEACRKRGVN--- 170
            SA+++          V   A        +  P   I         L+E  RK       
Sbjct: 62  -SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 171 ------RFILISSILVNGAAMGQILNPAYIFLNVFGLTL---------IAKLQAEQ---- 211
                 RF  IS+  V G           + L +F  T           +K  ++     
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 212 YIRKSGINYTIIRPGGL 228
           + R  G+   +      
Sbjct: 181 WRRTYGLPTIVTNCSNN 197

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 57.7 bits (138), Expect = 4e-10
 Identities = 35/189 (18%), Positives = 64/189 (33%), Gaps = 18/189 (9%)

Query: 56  EEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKA-------GVRDLDKAKT-TL 107
           EE  + +  + K   + G  G  G  ++E LL     V           R+LD+ ++   
Sbjct: 6   EELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVS 65

Query: 108 SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-------INL 160
            K   + + ++ D+       +   G D      A G  P                 +N+
Sbjct: 66  EKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNM 125

Query: 161 VEACRKRGVNRFILISSILVNGAAMGQILNPAYIF--LNVFGL-TLIAKLQAEQYIRKSG 217
           + A R   V  F   +S    G   G       I   L+ + +   + +L A+ + R  G
Sbjct: 126 LIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYG 185

Query: 218 INYTIIRPG 226
            +   +R  
Sbjct: 186 FSTIGLRYF 194

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 55.2 bits (131), Expect = 2e-09
 Identities = 33/223 (14%), Positives = 69/223 (30%), Gaps = 24/223 (10%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN-PSLQIVKADVTEGS 125
            +I + GATG  G+ + +  L  G      VR+   +  +       S +   A++  GS
Sbjct: 4   SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63

Query: 126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAM 185
                      EAV                  +N+++A ++ G  +    S    +   +
Sbjct: 64  ID---DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNV 120

Query: 186 GQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG-----GLRNEPPTGNIIME 240
             +     +F            +  + I   GI YT +         LR+    G     
Sbjct: 121 HAVEPAKSVFEVKA--------KVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPP 172

Query: 241 -------TEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEII 276
                   +       +  + +    ++A+  P +  K + + 
Sbjct: 173 RDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLR 215

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (128), Expect = 3e-09
 Identities = 32/229 (13%), Positives = 69/229 (30%), Gaps = 23/229 (10%)

Query: 59  EENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVK 118
            E+  ++ K +F+ GA+G +G+ +++++L +G   K  V  + + K T  ++       +
Sbjct: 7   REDFRMQNKSVFILGASGETGRVLLKEILEQGLFSK--VTLIGRRKLTFDEEAYKNVNQE 64

Query: 119 ADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI 178
               E            +           G                R             
Sbjct: 65  VVDFE-----KLDDYASAFQGHDVGFCCLGTTRGKAGAEGF----VRVDRDYVLKSAELA 115

Query: 179 LVNGAAMGQILNPAYIFLNVFGLTLIAKLQ-AEQYIRKSGINYTIIRPG---GLRNEPPT 234
              G     +L+      +   L L  K +   +        Y++ RPG     R E   
Sbjct: 116 KAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRP 175

Query: 235 GNIIMETEDTLYEG------TISRDQVAEVAVEALLHPESSYKVVEIIS 277
           G  ++               ++    V    +  ++ P    K +E++ 
Sbjct: 176 GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD--KQMELLE 222

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 1e-08
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 31/188 (16%)

Query: 67  KKI-FVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---------TLSKDNPSLQI 116
           + +  + G TG  G  + E LL KG+ V   VR      T           +    ++++
Sbjct: 1   RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL 60

Query: 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWK---------AINLVEACRKR 167
              D+T+ +  +          +            F   +          + L++A +  
Sbjct: 61  HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 120

Query: 168 GVN---RFILISSILVNGAAMGQILNPAYIF--LNVFGLTLIAKLQAEQ----YIRKSGI 218
           G+    +F   S+  + G            F   + +G    AKL A      +     +
Sbjct: 121 GLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG---AAKLYAYWIVVNFREAYNL 177

Query: 219 NYTIIRPG 226
                   
Sbjct: 178 FAVNGILF 185

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 51.7 bits (122), Expect = 3e-08
 Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 5/64 (7%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT-----LSKDNPSLQIVKA 119
           +   + V GA G     +VEQLL  G+ V+   R   K                   V  
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 120 DVTE 123
           D+ +
Sbjct: 70  DMLK 73

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 50.7 bits (120), Expect = 7e-08
 Identities = 34/181 (18%), Positives = 53/181 (29%), Gaps = 13/181 (7%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTE 123
           ++ V G +G  G     QLL  G  V       +  ++ L             V+ D+  
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 124 GSAKLSEAIGDDSEAVV-CATGFQPGWDLFAPWK--------AINLVEACRKRGVNRFIL 174
            +           + V+  A     G  +  P +         + L+ A R   V  FI 
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIF 121

Query: 175 ISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPT 234
            SS  V G         ++           +KL  EQ +              LR   P 
Sbjct: 122 SSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPV 181

Query: 235 G 235
           G
Sbjct: 182 G 182

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 49.2 bits (116), Expect = 2e-07
 Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 31/190 (16%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN------PSLQIVK 118
           + K I V G  G  G   V  +      V   V  LDK     +K N        +++V 
Sbjct: 1   QFKNIIVTGGAGFIGSNFVHYVYNNHPDVH--VTVLDKLTYAGNKANLEAILGDRVELVV 58

Query: 119 ADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAI--NLVEA-----CRKRGVNR 171
            D+ + +  + +        V  A        L  P   I  N +         ++   R
Sbjct: 59  GDIAD-AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIR 117

Query: 172 FILISSILVNGAAMGQILNPAYIFLNVFGLTL-----------IAKLQAEQ----YIRKS 216
           F  +S+  V G    +   P +        T              K  ++     ++R  
Sbjct: 118 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 177

Query: 217 GINYTIIRPG 226
           G+  TI    
Sbjct: 178 GVKATISNCS 187

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 48.8 bits (114), Expect = 3e-07
 Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGS 125
           ++ + G  G  G  + E+LL +       V  LD     +S+  ++P    V+ D++  S
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYE---VYGLDIGSDAISRFLNHPHFHFVEGDISIHS 58

Query: 126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPW 155
             +   +      +       P      P 
Sbjct: 59  EWIEYHVKKCDVVLPLVAIATPIEYTRNPL 88

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.5 bits (111), Expect = 4e-07
 Identities = 32/214 (14%), Positives = 65/214 (30%), Gaps = 21/214 (9%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
           K++ +AGATG +G+ +++++L++    K             ++   +      +     A
Sbjct: 3   KRVLLAGATGLTGEHLLDRILSEPTLAKV---------IAPARKALAEHPRLDNPVGPLA 53

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMG 186
           +L   +    +   C  G                 +     G     + +   +  +A+G
Sbjct: 54  ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALG 113

Query: 187 QILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG---GLRNEPPTGNIIMETED 243
                +  +  V G         +    +     TI RP    G R E     I+     
Sbjct: 114 ADAKSSIFYNRVKG------ELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIA 167

Query: 244 TLYEG---TISRDQVAEVAVEALLHPESSYKVVE 274
            +  G    I    +A       L      + VE
Sbjct: 168 RILPGKYHGIEACDLARALWRLALEEGKGVRFVE 201

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.9 bits (110), Expect = 1e-06
 Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 16/176 (9%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD---NPSLQIVKADVTE 123
           +   V G TG  G  + + LL KG+ V   V           ++      +Q    D+ +
Sbjct: 1   RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 124 GSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA---------INLVEACRKRG-VNRFI 173
             +     I    + V            +               +L+EA R+     RF 
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 120

Query: 174 LISSILVNGAAMGQIL--NPAYIFLNVFGLT-LIAKLQAEQYIRKSGINYTIIRPG 226
             S+  + G    +    N  +   + +G+  L        Y    G++ +     
Sbjct: 121 QASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILF 176

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 46.8 bits (109), Expect = 1e-06
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL--SKDNPSLQIVKADVT 122
           + K++FV G TG  G  +   L   G  VK          +    ++    +Q    D+ 
Sbjct: 7   QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIR 66

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.7 bits (104), Expect = 7e-06
 Identities = 34/194 (17%), Positives = 55/194 (28%), Gaps = 24/194 (12%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL-----DKAKTTLSKDNPSLQIVKADV 121
           K + V G  G  G   V +L+  G+       +L     D            +   + D+
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCV-VADNLSNSTYDSVARLEVLTKHHIPFYEVDL 60

Query: 122 TEGSA--KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAIN-------LVEACRKRGVNRF 172
            +     K+ +    DS                      N       L+E  ++  V++F
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 173 ILISSILVNGAAMGQILNPAYIFLNVFGLTL---IAKLQAEQYIR------KSGINYTII 223
           +  SS  V G A               G T      K   E  +       K    + I+
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180

Query: 224 RPGGLRNEPPTGNI 237
           R        P+G I
Sbjct: 181 RYFNPIGAHPSGLI 194

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 1e-05
 Identities = 47/269 (17%), Positives = 88/269 (32%), Gaps = 44/269 (16%)

Query: 67  KKIFVAGATGSSGKRIVEQLL---AKGFAVKAGVRDLDK------AKTTLSKDNPSLQIV 117
             + + G +   G  +  +L    ++ F V A +RDL        A   L+    SL+ +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 118 KADVTEGSA----------KLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINL------- 160
           + DV +  +             + +  ++   +       G D  A    +N+       
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122

Query: 161 ---VEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSG 217
              +   ++RG  R ++  S+   G  MG   N  Y     F L  + +  A       G
Sbjct: 123 QAFLPDMKRRGSGRVLVTGSV---GGLMGLPFNDVYCASK-FALEGLCESLAVLL-LPFG 177

Query: 218 INYTIIRPGGLRNE-------PPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSY 270
           ++ ++I  G +           P   +      T +          +V  EA  +PE   
Sbjct: 178 VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA 237

Query: 271 KVVEIISRVDAPKRSY---EDLFGSIKQR 296
           +V     R   P   Y   E     ++ R
Sbjct: 238 EVFLTALRAPKPTLRYFTTERFLPLLRMR 266

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 36/188 (19%), Positives = 58/188 (30%), Gaps = 25/188 (13%)

Query: 64  VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVK 118
           V  K   V GA    G+   E LL KG  V     +L+      +      +      ++
Sbjct: 1   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 60

Query: 119 ADVT--EGSAKLSEAIGDDSEAV---VCATGFQPGWDLFAPWKAINL----------VEA 163
            DV   +        + D    +   V   G     + +     INL          ++ 
Sbjct: 61  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN-WEKTLQINLVSVISGTYLGLDY 119

Query: 164 CRKRGVNRFILISSILVNGAAMGQILNPAYIFLN--VFGLTLIAKLQAEQYIRKSGINYT 221
             K+      +I ++      M     P Y      + G T  A L A   +  SG+   
Sbjct: 120 MSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN--LMNSGVRLN 177

Query: 222 IIRPGGLR 229
            I PG + 
Sbjct: 178 AICPGFVN 185

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.3 bits (101), Expect = 1e-05
 Identities = 34/248 (13%), Positives = 71/248 (28%), Gaps = 55/248 (22%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVK--AGVRDLDKAKTTLSKDNPSLQIVKADVT 122
               + V GA    G  +V+QL+         A  RD++KA    S  +  + ++   VT
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVT 61

Query: 123 EGSA------KLSEAIGDDSEAVVC---------ATGFQPGWDLFAPWKAINL------- 160
              +      K+ E +G D  +++           T  +P   + A    +N        
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 161 ---VEACRKRGVNRFILISSILV---------------NGAAMGQILNPAYIFLNVFGLT 202
              +   +           S+                 N +   Q    AY         
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 203 LIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEA 262
               L  +  ++   +      PG            ++T        ++ +Q     + +
Sbjct: 182 FGRTLAVD--LKDDNVLVVNFCPG-----------WVQTNLGGKNAALTVEQSTAELISS 228

Query: 263 LLHPESSY 270
               ++S+
Sbjct: 229 FNKLDNSH 236

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (98), Expect = 3e-05
 Identities = 36/195 (18%), Positives = 60/195 (30%), Gaps = 24/195 (12%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAV----------KAGVRDLDKAKTTLSKDNPSLQI 116
           +K+ V G  G  G   V +LL  G+            + G    +  +        S++ 
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62

Query: 117 VKADVTEGSAKLSEAIGDDSEAVVCATGF-QPGWDLFAPWKAIN--------LVEACRKR 167
            + D+ +  A           AV+   G    G  +  P             L+E  +  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122

Query: 168 GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRK-----SGINYTI 222
           GV   +  SS  V G      L+ A+           +K   E+ IR         N  +
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVL 182

Query: 223 IRPGGLRNEPPTGNI 237
           +R         +G I
Sbjct: 183 LRYFNPTGAHASGCI 197

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 41.6 bits (96), Expect = 6e-05
 Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 20/126 (15%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN-------PSLQIVKAD 120
           K+ + G  G  G  +    L++G  +       D      + DN        + + V  D
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIV----FDNLSRKGATDNLHWLSSLGNFEFVHGD 57

Query: 121 VTEGSAKLSEAIGDDSEAVVC-ATGFQPGWDLFAPWK--------AINLVEACRKRGVNR 171
           +   +           ++    A        +  P           +NL+EA R+   N 
Sbjct: 58  IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117

Query: 172 FILISS 177
            I+ SS
Sbjct: 118 NIIYSS 123

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.0 bits (95), Expect = 8e-05
 Identities = 25/217 (11%), Positives = 54/217 (24%), Gaps = 17/217 (7%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA 126
            K+ V G  G+ G  I+E     G+ V       +    +    + +    + + +    
Sbjct: 3   GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQ 62

Query: 127 KLSEAIGDDSEAVVCATGFQPGWDLFAPWKA--------INLVEACRKRGVNRFILISSI 178
             S   G   + V C  G   G    +             ++  +     +    L    
Sbjct: 63  TASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGG 122

Query: 179 LVNGAAMGQILNPAYIFLNV----FGLTLIAKLQA-EQYIRKSGINYTIIRPGGLRNEPP 233
           L+        + P    +        +  +    A +            I P  L     
Sbjct: 123 LLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLD---- 178

Query: 234 TGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSY 270
           T        +  +        ++E  ++      S  
Sbjct: 179 TPMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRP 215

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 31/186 (16%), Positives = 53/186 (28%), Gaps = 27/186 (14%)

Query: 67  KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---------LSKDNPSLQIV 117
           K   + G TG  G  + E LL KG+ V   +R      T           + +   +++ 
Sbjct: 2   KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWD----------LFAPWKAINLVEACRKR 167
            AD+T+ ++ L   I       V     Q                    A+ L+EA R  
Sbjct: 62  YADLTD-ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 120

Query: 168 GVNRFILISSILVNGAAMGQILNPAYI---FLNVFGLTLIAKLQAEQYI----RKSGINY 220
            ++    +       + M     P        +       +K  A  Y        G+  
Sbjct: 121 TIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFA 180

Query: 221 TIIRPG 226
                 
Sbjct: 181 CNGILF 186

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 38.7 bits (88), Expect = 5e-04
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 6/51 (11%)

Query: 68  KIFVAGATGSSGKRIVEQLLAKGFAV------KAGVRDLDKAKTTLSKDNP 112
           KI + GA G  G+ I +QL  K   V         + ++       ++  P
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKP 53

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.0 bits (86), Expect = 0.001
 Identities = 7/27 (25%), Positives = 10/27 (37%)

Query: 67 KKIFVAGATGSSGKRIVEQLLAKGFAV 93
           ++ V G  G  G      L  K + V
Sbjct: 2  SRVMVIGGDGYCGWATALHLSKKNYEV 28

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 28/224 (12%), Positives = 64/224 (28%), Gaps = 28/224 (12%)

Query: 65  KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG 124
           + +++ V G  G+ G R V+   A+ + V A +  ++  + + S              + 
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWV-ASIDVVENEEASASVIVKMTDSFTEQADQV 59

Query: 125 SAKLSEAIGDDS-EAVVCATGFQPGWDLFAPWKAINLVE----------------ACRKR 167
           +A++ + +GD   +A++C  G   G +  +     N                       +
Sbjct: 60  TAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK 119

Query: 168 GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY-IRKSGINYTIIRPG 226
                 L  +        G I            +  + +  A +     SG     + P 
Sbjct: 120 EGGLLTLAGAKAALDGTPGMIGYGMAK----GAVHQLCQSLAGKNSGMPSGAAAIAVLPV 175

Query: 227 GLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSY 270
            L     T        +  +      + + E      +      
Sbjct: 176 TLD----TPMNRKSMPEADFSSWTPLEFLVETFH-DWITGNKRP 214

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	296
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.97
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.97
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.96
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.96
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.96
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.96
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.96
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.96
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.95
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.95
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.95
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.95
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.95
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.95
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.94
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.94
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.94
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.94
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.94
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.94
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.93
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.93
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.93
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.93
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.93
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.93
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.93
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.93
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.93
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.93
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.93
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.93
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.93
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.93
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.93
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.93
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.92
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.92
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.92
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.92
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.92
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.92
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.92
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.92
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.92
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.92
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.92
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.92
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.91
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.91
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.91
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.91
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.91
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.91
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.91
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.9
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.9
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.9
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.9
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.9
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.9
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.89
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.89
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.89
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.89
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.89
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.88
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.88
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.88
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.88
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.87
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.87
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.87
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.87
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.86
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.85
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.85
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.85
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.84
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.84
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.82
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.8
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.79
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.79
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.77
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.75
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.75
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.73
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.68
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.61
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.5
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.8
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.58
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.52
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.48
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.37
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	98.33
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.3
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.29
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	98.26
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.24
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.23
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.18
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.15
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.12
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.11
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.09
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.04
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.03
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.03
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.0
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.0
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.0
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.97
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.96
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.95
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.95
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.91
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.91
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.91
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.9
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.89
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.89
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.86
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.85
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.84
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.84
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.84
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.84
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.81
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.76
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.75
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.75
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.74
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.68
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.66
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.64
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.62
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.61
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.59
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.58
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.56
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.55
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.53
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.5
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.49
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.48
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.45
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.44
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.43
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.36
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.33
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.3
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.28
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.27
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.26
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.26
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.24
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.21
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.2
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.2
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.19
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	97.19
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.17
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.16
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	97.1
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	97.1
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	97.09
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	97.06
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.04
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.02
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.96
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.96
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.95
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.89
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.88
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.85
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.84
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.83
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.83
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.82
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.82
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.8
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.79
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.79
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	96.76
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.76
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.74
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.65
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.64
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.6
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.56
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.53
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.52
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.5
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.5
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.48
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.48
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.47
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.46
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.44
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.44
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.4
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.37
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.35
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.33
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.32
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.32
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.3
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.29
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.26
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.25
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.24
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.2
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	96.17
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.14
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.09
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.04
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	96.02
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.99
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.99
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.97
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.96
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.91
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.86
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.83
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.82
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.78
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.74
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.68
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	95.64
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.62
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.56
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.52
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.52
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	95.33
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	95.27
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.26
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.25
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.96
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.9
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.88
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.86
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.82
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	94.64
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.28
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	94.24
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	94.18
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.98
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.96
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.9
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	93.89
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.88
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.87
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	93.86
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	93.85
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.83
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.76
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	93.62
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	93.61
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.51
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.46
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	93.45
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	93.38
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.34
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.27
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.18
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.02
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	92.85
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.85
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.84
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.74
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.73
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	92.56
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.38
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	92.38
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.22
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	92.2
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	92.01
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	91.92
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	91.78
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.61
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.54
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.53
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.31
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	91.14
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.08
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	91.06
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	90.79
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	90.78
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	90.54
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	90.4
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	90.33
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	90.05
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	89.89
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	89.74
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	89.52
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	89.33
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	89.19
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	89.0
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	88.98
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	88.94
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.88
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	88.78
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	88.7
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	88.7
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	88.58
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	88.52
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	88.51
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	88.49
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.38
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	88.29
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	87.99
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	87.96
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	87.77
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	87.7
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	87.61
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	87.56
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	87.44
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	87.24
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	87.18
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	87.1
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	86.89
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.85
d1x74a1	359	2-methylacyl-CoA racemase Mcr {Mycobacterium tuber	86.83
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	86.82
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	86.59
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	86.54
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	86.32
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	86.02
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	86.0
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.87
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	85.79
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	85.79
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	85.62
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	85.48
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	85.33
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.29
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	84.93
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	84.89
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	84.43
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	84.17
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	84.02
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	83.77
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	83.72
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	83.5
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	83.33
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	83.32
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.08
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	83.0
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	82.07
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	81.72
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	81.5
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	81.29
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	81.09
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	80.9
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	80.78
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	80.6
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.6
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	80.51
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	80.43
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	80.13
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	80.01

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-33  Score=227.55  Aligned_cols=201  Identities=20%  Similarity=0.266  Sum_probs=166.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |.+|||+||||||+||++++++|+++|++|++++|++++.+...   ..+++++.+|++| .+++.+++++ +|+|||++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~---~~~~~~~~gD~~d-~~~l~~al~~-~d~vi~~~   75 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG---PRPAHVVVGDVLQ-AADVDKTVAG-QDAVIVLL   75 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS---CCCSEEEESCTTS-HHHHHHHHTT-CSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc---ccccccccccccc-hhhHHHHhcC-CCEEEEEe
Confidence            35789999999999999999999999999999999988865443   3679999999999 9999999999 99999999


Q ss_pred             CCCCCCCCcch--hHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEE
Q 022495          144 GFQPGWDLFAP--WKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYT  221 (296)
Q Consensus       144 g~~~~~~~~~~--~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~  221 (296)
                      |..........  ...+++++++++.+++|||++||..+|.+....        ......|...|..+|+++++.+++|+
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~--------~~~~~~~~~~~~~~e~~l~~~~~~~t  147 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV--------PPRLQAVTDDHIRMHKVLRESGLKYV  147 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS--------CGGGHHHHHHHHHHHHHHHHTCSEEE
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc--------cccccccchHHHHHHHHHHhcCCceE
Confidence            87654433222  222899999999999999999999887654322        12245678899999999999999999


Q ss_pred             EEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          222 IIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       222 ~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      +|||+.+++....+.............+++++|+|+++++++++++..++.+.+..
T Consensus       148 iirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         148 AVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             EECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             EEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            99999999877666665555555556789999999999999999988888888765

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-32  Score=241.85  Aligned_cols=222  Identities=16%  Similarity=0.110  Sum_probs=167.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-----hhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC-CCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-----AKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD-DSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d  137 (296)
                      |+|||||||||||++|+++|+++|++|++++|....     ...+.   .....+++++++|++| .+.+.+++++ .+|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSD-TSNLTRILREVQPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSC-HHHHHHHHHHHCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCC-HHHHHHHHhccCCC
Confidence            789999999999999999999999999999996432     11111   1134689999999999 9999999986 579


Q ss_pred             EEEEcCCCCCCCCCcc----hhHH-----HHHHHHHHHcCC---CEEEEEccceeccCccCccCChhhhhhhhhHHHHHH
Q 022495          138 AVVCATGFQPGWDLFA----PWKA-----INLVEACRKRGV---NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA  205 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~----~~~~-----~~~l~~~~~~~~---~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s  205 (296)
                      +|+|+|+.........    ....     .+++++|++.++   .+|||+||..+||.....+.+|+. +.+|.+.|+.+
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~-~~~P~~~Y~~s  159 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETT-PFYPRSPYAVA  159 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTS-CCCCCSHHHHH
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCC-CCCCCChHHHH
Confidence            9999998754322111    1121     899999999764   379999999999876666566544 45678899999


Q ss_pred             HHHHHHHHH----HhCCcEEEEecCcccCCCCCCce-------------------eecccCccccCCcCHHHHHHHHHHH
Q 022495          206 KLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       206 K~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~-------------------~~~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      |.++|++++    +++++++++||+.+||+......                   ...+.......+++++|+|+++..+
T Consensus       160 K~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~  239 (357)
T d1db3a_         160 KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM  239 (357)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHH
Confidence            999998775    46999999999999998533211                   1112233344699999999999998


Q ss_pred             hcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          263 LLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       263 l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++.+  .++.||+++   ++.+++.|+++++.+
T Consensus       240 ~~~~--~~~~yni~s---g~~~s~~~~~~~~~~  267 (357)
T d1db3a_         240 LQQE--QPEDFVIAT---GVQYSVRQFVEMAAA  267 (357)
T ss_dssp             TSSS--SCCCEEECC---CCCEEHHHHHHHHHH
T ss_pred             HhCC--CCCeEEECC---CCceehHHHHHHHHH
Confidence            8764  457899998   789999999998764

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-31  Score=228.83  Aligned_cols=217  Identities=14%  Similarity=0.156  Sum_probs=157.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      .|+||||||+||||++++++|+++|++|++++|......+...  ....++++...|+.+      .++.+ +|+|||+|
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~~~-~d~VihlA   73 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE------PLYIE-VDQIYHLA   73 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS------CCCCC-CSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHH------HHHcC-CCEEEECc
Confidence            3799999999999999999999999999999874332221111  123345555555444      34566 99999999


Q ss_pred             CCCCC----CCCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh----hhhhhhHHHHHHHHHHH
Q 022495          144 GFQPG----WDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY----IFLNVFGLTLIAKLQAE  210 (296)
Q Consensus       144 g~~~~----~~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~----~~~~~~~~y~~sK~~~e  210 (296)
                      +....    .+.......     .++++++++.++ ++||+||+.+|+.....+..+..    .+..|.+.|+.+|.++|
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E  152 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE  152 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHH
Confidence            86442    111111111     899999999986 89999999999876554444332    35567889999999999


Q ss_pred             HHHH----HhCCcEEEEecCcccCCCCCCc-----------------eeecccCccccCCcCHHHHHHHHHHHhcCCCCC
Q 022495          211 QYIR----KSGINYTIIRPGGLRNEPPTGN-----------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESS  269 (296)
Q Consensus       211 ~~~~----~~~~~~~~lrp~~i~g~~~~~~-----------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~  269 (296)
                      .+++    +++++++++||+.+||+.....                 +.+.........++|++|+++++..+++..  .
T Consensus       153 ~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~--~  230 (312)
T d2b69a1         153 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN--V  230 (312)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS--C
T ss_pred             HHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc--c
Confidence            8874    4699999999999999754321                 111122233346899999999999888765  3


Q ss_pred             CCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          270 YKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       270 ~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +..||+++   +...++.|+++.+++
T Consensus       231 ~~~~n~~~---~~~~~~~~~~~~i~~  253 (312)
T d2b69a1         231 SSPVNLGN---PEEHTILEFAQLIKN  253 (312)
T ss_dssp             CSCEEESC---CCEEEHHHHHHHHHH
T ss_pred             CCceEecC---CcccchhhHHHHHHH
Confidence            55899988   799999999998875

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.5e-29  Score=222.90  Aligned_cols=221  Identities=18%  Similarity=0.063  Sum_probs=169.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      ++|+||||||+||||++|+++|+++|++|+++++........   ......+..+|++| .+.+.+++.+ +|+|||+|+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~-~d~Vih~a~   88 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE---DMFCDEFHLVDLRV-MENCLKVTEG-VDHVFNLAA   88 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG---GGTCSEEEECCTTS-HHHHHHHHTT-CSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hcccCcEEEeechh-HHHHHHHhhc-CCeEeeccc
Confidence            578999999999999999999999999999998765432211   12456889999999 8999999998 999999997


Q ss_pred             CCCCC----C-CcchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCCh------hhhhhhhhHHHHHHHHH
Q 022495          145 FQPGW----D-LFAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILNP------AYIFLNVFGLTLIAKLQ  208 (296)
Q Consensus       145 ~~~~~----~-~~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~------~~~~~~~~~~y~~sK~~  208 (296)
                      .....    . ......  .   .++++++++.++++||++||..+|+.....+..+      +..+..|.+.|+.+|.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~  168 (363)
T d2c5aa1          89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLA  168 (363)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHH
Confidence            65431    1 111111  1   8999999999999999999999998765433322      23355677889999999


Q ss_pred             HHHHHH----HhCCcEEEEecCcccCCCCCCce--------------------eecccCccccCCcCHHHHHHHHHHHhc
Q 022495          209 AEQYIR----KSGINYTIIRPGGLRNEPPTGNI--------------------IMETEDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       209 ~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~--------------------~~~~~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      +|++++    +++++++++||+.+||+......                    ...........++|++|+++++..+++
T Consensus       169 ~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~  248 (363)
T d2c5aa1         169 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK  248 (363)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHh
Confidence            998775    46999999999999997533211                    011112234569999999999999887


Q ss_pred             CCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          265 HPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       265 ~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      .+  .+.+||+++   +..+++.|+++.+.+
T Consensus       249 ~~--~~~~~ni~~---~~~~s~~~l~~~i~~  274 (363)
T d2c5aa1         249 SD--FREPVNIGS---DEMVSMNEMAEMVLS  274 (363)
T ss_dssp             SS--CCSCEEECC---CCCEEHHHHHHHHHH
T ss_pred             CC--CCCeEEEec---CCcccHHHHHHHHHH
Confidence            64  456899998   799999999999875

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.97  E-value=1.2e-30  Score=226.37  Aligned_cols=222  Identities=15%  Similarity=0.121  Sum_probs=168.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEE------EEcCc--chhhh-cccCCCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKA------GVRDL--DKAKT-TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~------~~r~~--~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      |+||||||+||||+++++.|+++|++|..      +++..  ..... .......+++++.+|+.+ .......+.. +|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~-~d   78 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD-AGLLARELRG-VD   78 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTC-HHHHHHHTTT-CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEecccc-chhhhccccc-cc
Confidence            58999999999999999999999986543      33221  11111 111245689999999999 8888888888 99


Q ss_pred             EEEEcCCCCCCCC----CcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHH
Q 022495          138 AVVCATGFQPGWD----LFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQ  208 (296)
Q Consensus       138 ~vv~~ag~~~~~~----~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~  208 (296)
                      .|+|+|+......    .......     .++++++++.++++|||+||..+|+.....+.++.. +..|.+.|+.+|.+
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~-~~~p~~~Y~~sK~~  157 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESS-PLEPNSPYAASKAG  157 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTS-CCCCCSHHHHHHHH
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCC-CCCCCCHHHHHHHH
Confidence            9999997643211    1111111     899999999999999999999999987766655543 56778889999999


Q ss_pred             HHHHHH----HhCCcEEEEecCcccCCCCCCce---------------eecccCccccCCcCHHHHHHHHHHHhcCCCCC
Q 022495          209 AEQYIR----KSGINYTIIRPGGLRNEPPTGNI---------------IMETEDTLYEGTISRDQVAEVAVEALLHPESS  269 (296)
Q Consensus       209 ~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~---------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~  269 (296)
                      +|.+++    +++++++++||+.+||+......               .+.........++|++|+|+++..++..+. .
T Consensus       158 ~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~-~  236 (322)
T d1r6da_         158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (322)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC-C
Confidence            998774    56999999999999998643321               111222333468999999999999998876 4


Q ss_pred             CCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          270 YKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       270 ~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.+||+++   +...++.|+++.+.+
T Consensus       237 ~~~~ni~~---~~~~s~~e~~~~i~~  259 (322)
T d1r6da_         237 GEIYHIGG---GLELTNRELTGILLD  259 (322)
T ss_dssp             TCEEEECC---CCEEEHHHHHHHHHH
T ss_pred             CCeeEEee---cccchhHHHHHHHHH
Confidence            67999988   799999999998864

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.4e-30  Score=226.07  Aligned_cols=225  Identities=18%  Similarity=0.191  Sum_probs=166.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh----hcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK----TTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      |+||||||+||||++|++.|+++|++|++++|......    ........++.++++|++| .+.+.++++. ++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN-EALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC-HHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC-HHHHHHHHhccCCCEEEE
Confidence            57999999999999999999999999999987432211    1111123689999999999 8999999873 3999999


Q ss_pred             cCCCCCCC----CCcchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH
Q 022495          142 ATGFQPGW----DLFAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY  212 (296)
Q Consensus       142 ~ag~~~~~----~~~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  212 (296)
                      +|+.....    +......  +   +++++++++.+++++|++||..+|+........+......|...|+.+|.++|.+
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~  159 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQI  159 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHH
Confidence            99864311    1111111  1   8999999999999999999999998776655555555567788999999999988


Q ss_pred             HHH-----hCCcEEEEecCcccCCCCCCce----------e----------------eccc------CccccCCcCHHHH
Q 022495          213 IRK-----SGINYTIIRPGGLRNEPPTGNI----------I----------------METE------DTLYEGTISRDQV  255 (296)
Q Consensus       213 ~~~-----~~~~~~~lrp~~i~g~~~~~~~----------~----------------~~~~------~~~~~~~i~~~Dv  255 (296)
                      +++     .+++++++||+.+||+.....+          +                +.+.      ......+++++|+
T Consensus       160 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~  239 (338)
T d1udca_         160 LTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_dssp             HHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred             HHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeeh
Confidence            753     4899999999999997533110          0                0000      1122357899999


Q ss_pred             HHHHHHHhcC--CCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          256 AEVAVEALLH--PESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       256 a~~i~~~l~~--~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +.++......  ....+.+||+++   +..+++.|+++.+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~i~Ni~~---~~~~si~e~~~~i~~  278 (338)
T d1udca_         240 ADGHVVAMEKLANKPGVHIYNLGA---GVGNSVLDVVNAFSK  278 (338)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEESC---SSCEEHHHHHHHHHH
T ss_pred             hhhccccccccccccCcceeeecC---CCCCcHHHHHHHHHH
Confidence            9876665542  233456788877   688999999998864

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=2.5e-30  Score=227.97  Aligned_cols=224  Identities=15%  Similarity=0.095  Sum_probs=165.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh--hccc--CCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK--TTLS--KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      |+||||||+||||++|+++|+++|++|++..++.....  ..+.  ....+++++++|++| .+.+.+++.+ ++|+|||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD-SAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC-HHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCC-HHHHHHHHHhCCCCEEEE
Confidence            58999999999999999999999998665554432111  1111  134689999999999 8999888875 5999999


Q ss_pred             cCCCCCCC----CCcchhHH-----HHHHHHHHHcC---------CCEEEEEccceeccCccCccC---------Chhhh
Q 022495          142 ATGFQPGW----DLFAPWKA-----INLVEACRKRG---------VNRFILISSILVNGAAMGQIL---------NPAYI  194 (296)
Q Consensus       142 ~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~---------~~~iV~~SS~~~~~~~~~~~~---------~~~~~  194 (296)
                      +|+.....    ++......     .+++++|++.+         +++||++||..+||.......         ..+..
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            99864311    11111121     78899888764         359999999999987643322         22334


Q ss_pred             hhhhhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQV  255 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~Dv  255 (296)
                      +..|.+.|+.+|.++|.++.    ++++++++|||+.+||+.....               +...+.......++|++|+
T Consensus       160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence            56778899999999999885    4799999999999999854321               1112222333468999999


Q ss_pred             HHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          256 AEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       256 a~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |+++..+++.+.. +.+||+++   +...++.|+++.+.+
T Consensus       240 a~ai~~~~~~~~~-~~~~Ni~s---~~~~s~~~~~~~i~~  275 (361)
T d1kewa_         240 ARALHMVVTEGKA-GETYNIGG---HNEKKNLDVVFTICD  275 (361)
T ss_dssp             HHHHHHHHHHCCT-TCEEEECC---CCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCC-CCeEEECC---CCCcchHHHHhHhhh
Confidence            9999999987654 56999988   788999999998864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=4.1e-29  Score=218.33  Aligned_cols=226  Identities=15%  Similarity=0.137  Sum_probs=172.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-------hhcc-cCCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-------KTTL-SKDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      ++.|+|||||||||||++|+++|+++|++|++++|.....       .... .....+++++.+|..| ...+...... 
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d-~~~~~~~~~~-   91 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN-LDDCNNACAG-   91 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS-HHHHHHHHTT-
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccc-cccccccccc-
Confidence            3568999999999999999999999999999998743211       1111 0123579999999999 8888888888 


Q ss_pred             CCEEEEcCCCCCCC----CCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHH
Q 022495          136 SEAVVCATGFQPGW----DLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK  206 (296)
Q Consensus       136 ~d~vv~~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK  206 (296)
                      ++.++|+++.....    +.......     .+++++|++.++++|||+||..+||.....+.+|+ .+.+|.+.|+.+|
T Consensus        92 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-~~~~p~~~Y~~sK  170 (341)
T d1sb8a_          92 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-TIGKPLSPYAVTK  170 (341)
T ss_dssp             CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-CCCCCCSHHHHHH
T ss_pred             ccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCC-CCCCCCCcchHHH
Confidence            99999998754321    11111111     99999999999999999999999998776666554 4567888999999


Q ss_pred             HHHHHHHH----HhCCcEEEEecCcccCCCCCCc-----e--------------eecccCccccCCcCHHHHHHHHHHHh
Q 022495          207 LQAEQYIR----KSGINYTIIRPGGLRNEPPTGN-----I--------------IMETEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       207 ~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~-----~--------------~~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                      .++|++++    +.+++++++||+.+||+.....     +              .+.+.......++|++|++.++..++
T Consensus       171 ~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~  250 (341)
T d1sb8a_         171 YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA  250 (341)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhh
Confidence            99998774    4689999999999999753321     1              11122233356999999999999888


Q ss_pred             cCCC-CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          264 LHPE-SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       264 ~~~~-~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ..+. ..+.+|+++.   +...++.|+++.|.+
T Consensus       251 ~~~~~~~~~~~~~~~---~~~~si~~i~~~i~~  280 (341)
T d1sb8a_         251 TAGLDARNQVYNIAV---GGRTSLNQLFFALRD  280 (341)
T ss_dssp             TCCGGGCSEEEEESC---SCCEEHHHHHHHHHH
T ss_pred             hccccccceeeeecc---cccchHHHHHHHHHH
Confidence            7653 4566888877   688999999998864

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.9e-28  Score=214.08  Aligned_cols=222  Identities=15%  Similarity=0.182  Sum_probs=165.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHH-HHhcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLS-EAIGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~d~vv~~ag  144 (296)
                      ||||||||+||||++|+++|+++| ++|+++++.........  ..++++++++|+++ .+.+. .++++ +|+|||+|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~--~~~~~~~i~~Di~~-~~~~~~~~~~~-~d~Vih~a~   76 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--NHPHFHFVEGDISI-HSEWIEYHVKK-CDVVLPLVA   76 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--TCTTEEEEECCTTT-CSHHHHHHHHH-CSEEEECBC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc--cCCCeEEEECccCC-hHHHHHHHHhC-CCccccccc
Confidence            589999999999999999999999 58999988765544443  35789999999998 54444 46777 999999998


Q ss_pred             CCCCCCCc----chhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChh------hhhhhhhHHHHHHHHHH
Q 022495          145 FQPGWDLF----APWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPA------YIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       145 ~~~~~~~~----~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~------~~~~~~~~~y~~sK~~~  209 (296)
                      ........    .....     .++++++.+.++ +++++||..+|+........+.      .....|...|+.+|.++
T Consensus        77 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~  155 (342)
T d2blla1          77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL  155 (342)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHH
T ss_pred             cccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccch
Confidence            65422111    11111     999999999986 6788999999987655433322      22345678899999999


Q ss_pred             HHHHH----HhCCcEEEEecCcccCCCCCCc-----------------------eeecccCccccCCcCHHHHHHHHHHH
Q 022495          210 EQYIR----KSGINYTIIRPGGLRNEPPTGN-----------------------IIMETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       210 e~~~~----~~~~~~~~lrp~~i~g~~~~~~-----------------------~~~~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      |++++    +++++++++||+.++|+.....                       +...+.......++|++|+|+++..+
T Consensus       156 E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~  235 (342)
T d2blla1         156 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI  235 (342)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHH
T ss_pred             hhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeee
Confidence            98875    4699999999999999743221                       11122233445699999999999999


Q ss_pred             hcCC--CCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          263 LLHP--ESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       263 l~~~--~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++.+  ...+++||++++  ...+++.|+++.+.+
T Consensus       236 ~~~~~~~~~g~~~Nig~~--~~~~t~~~l~~~i~~  268 (342)
T d2blla1         236 IENAGNRCDGEIINIGNP--ENEASIEELGEMLLA  268 (342)
T ss_dssp             HHCGGGTTTTEEEEECCT--TSEEEHHHHHHHHHH
T ss_pred             hhhccccCCCeEEEEecc--cchhHHHHHHHHHHH
Confidence            9875  345679999762  245799999998864

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.96  E-value=1.4e-28  Score=215.43  Aligned_cols=223  Identities=16%  Similarity=0.076  Sum_probs=164.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc----hhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD----KAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +|+|||||||||||++|+++|+++|++|.++.++.-    ...........+++++.+|++| .+.+..++.+ .|.|+|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d-~~~~~~~~~~-~~~v~~   79 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD-AELVDKLAAK-ADAIVH   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTC-HHHHHHHHTT-CSEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCC-HHHHHHHHhh-hhhhhh
Confidence            689999999999999999999999988766655421    1111111134689999999999 9999999998 999999


Q ss_pred             cCCCCCCC----CCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCc-----------cCChhhhhhhhhHH
Q 022495          142 ATGFQPGW----DLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQ-----------ILNPAYIFLNVFGL  201 (296)
Q Consensus       142 ~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~-----------~~~~~~~~~~~~~~  201 (296)
                      +|+.....    +.......     .++++++++.+. ++|++||..+||.....           ....+..+..|.+.
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~  158 (346)
T d1oc2a_          80 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP  158 (346)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSH
T ss_pred             hhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCCCH
Confidence            99864321    11122221     999999999985 89999999999753110           01112224566788


Q ss_pred             HHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc---------------eeecccCccccCCcCHHHHHHHHHHH
Q 022495          202 TLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN---------------IIMETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       202 y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~---------------~~~~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      |+.+|.++|.+++    +.+++++++||+.+||+.....               ............++|++|+|++++.+
T Consensus       159 Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~  238 (346)
T d1oc2a_         159 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI  238 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHH
Confidence            9999999998774    4699999999999999753321               11122233345689999999999988


Q ss_pred             hcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          263 LLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       263 l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +..+.. +..+++++   +...++.|+++.+.+
T Consensus       239 ~~~~~~-~~~~~~~~---~~~~~~~~~~~~i~~  267 (346)
T d1oc2a_         239 LTKGRM-GETYLIGA---DGEKNNKEVLELILE  267 (346)
T ss_dssp             HHHCCT-TCEEEECC---SCEEEHHHHHHHHHH
T ss_pred             Hhhccc-Cccccccc---cccccchHHHHHHHH
Confidence            887664 56889888   688999999998764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.96  E-value=2.8e-28  Score=213.16  Aligned_cols=225  Identities=16%  Similarity=0.138  Sum_probs=162.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc-----cCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL-----SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      +||+||||||+||||++|+++|+++|++|++++|+.++...+.     .........+.+|++| .+.+.+++.+ +|+|
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~-~~~v   87 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK-QGAYDEVIKG-AAGV   87 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS-TTTTTTTTTT-CSEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccc-hhhhhhhccc-chhh
Confidence            3899999999999999999999999999999999876544321     1122345567899999 8889999999 9999


Q ss_pred             EEcCCCCCCCCCcch-h--HH---HHHHHHHHHc-CCCEEEEEccceeccCccCc----cCC---------------hhh
Q 022495          140 VCATGFQPGWDLFAP-W--KA---INLVEACRKR-GVNRFILISSILVNGAAMGQ----ILN---------------PAY  193 (296)
Q Consensus       140 v~~ag~~~~~~~~~~-~--~~---~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~----~~~---------------~~~  193 (296)
                      +|+++.......... .  ++   .+++++|.+. ++++|||+||+.+++.....    ..+               ++.
T Consensus        88 ~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~  167 (342)
T d1y1pa1          88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES  167 (342)
T ss_dssp             EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTT
T ss_pred             hhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccccc
Confidence            999986543222111 1  11   8999999887 58999999998753322111    101               122


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH----Hh--CCcEEEEecCcccCCCCCCce-----------------eecccCccccCCc
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR----KS--GINYTIIRPGGLRNEPPTGNI-----------------IMETEDTLYEGTI  250 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~----~~--~~~~~~lrp~~i~g~~~~~~~-----------------~~~~~~~~~~~~i  250 (296)
                      .+.++...|+.+|..+|.++.    ++  ++++++++|+.++|+......                 ...........++
T Consensus       168 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v  247 (342)
T d1y1pa1         168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYV  247 (342)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEE
T ss_pred             CCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeee
Confidence            356678899999999998653    33  578899999999997422110                 0000112223589


Q ss_pred             CHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          251 SRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       251 ~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |++|+|++++.+++++...+ .+++++   +...+++|++++|.+
T Consensus       248 ~v~Dva~~~i~~l~~~~~~g-~~~~~~---~~~~t~~eia~~i~k  288 (342)
T d1y1pa1         248 SAVDIGLLHLGCLVLPQIER-RRVYGT---AGTFDWNTVLATFRK  288 (342)
T ss_dssp             EHHHHHHHHHHHHHCTTCCS-CEEEEC---CEEECHHHHHHHHHH
T ss_pred             eHHHHHHHHHHhhcCccccc-eEEEEc---CCceEHHHHHHHHHH
Confidence            99999999999999887655 456766   578999999999865

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.6e-28  Score=211.88  Aligned_cols=220  Identities=15%  Similarity=0.060  Sum_probs=162.5

Q ss_pred             CeE-EEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-----hhccc----CCCCCeEEEEcccCCChHHHHHHhcC-C
Q 022495           67 KKI-FVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-----KTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD-D  135 (296)
Q Consensus        67 ~~i-lVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~-~  135 (296)
                      ||| |||||+||||++|+++|+++|++|++++|..+..     +.+..    ....+++++.+|++| .+.+.+++.+ .
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD-STCLVKIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTC-HHHHHHHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCC-chhhHHHHhhcc
Confidence            467 9999999999999999999999999999975421     11111    123578999999999 8999988865 5


Q ss_pred             CCEEEEcCCCCCCC----CCcchhHH-----HHHHHHHHHcCC---CEEEEEccceeccCccCccCChhhhhhhhhHHHH
Q 022495          136 SEAVVCATGFQPGW----DLFAPWKA-----INLVEACRKRGV---NRFILISSILVNGAAMGQILNPAYIFLNVFGLTL  203 (296)
Q Consensus       136 ~d~vv~~ag~~~~~----~~~~~~~~-----~~~l~~~~~~~~---~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~  203 (296)
                      +++++|+++.....    ........     .++++++++.++   ++|||+||..+||.....+.+|+ .+.+|.+.|+
T Consensus        80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-~~~~P~~~Yg  158 (347)
T d1t2aa_          80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYG  158 (347)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-SCCCCCSHHH
T ss_pred             cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC-CCCCCCCHHH
Confidence            88999998754321    11111111     889999999874   48999999999997766666554 3567788999


Q ss_pred             HHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc-------------------eeecccCccccCCcCHHHHHHHHH
Q 022495          204 IAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN-------------------IIMETEDTLYEGTISRDQVAEVAV  260 (296)
Q Consensus       204 ~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~-------------------~~~~~~~~~~~~~i~~~Dva~~i~  260 (296)
                      .+|.++|+++.    +++++++++||+.+||+.....                   ....+.......+++++|+++++.
T Consensus       159 ~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~  238 (347)
T d1t2aa_         159 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMW  238 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHH
Confidence            99999998874    4699999999999999743221                   111122333457899999999999


Q ss_pred             HHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHh
Q 022495          261 EALLHPESSYKVVEIISRVDAPKRSYEDLFGSI  293 (296)
Q Consensus       261 ~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i  293 (296)
                      .++....  ...+++..   ....++.+..+.+
T Consensus       239 ~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~  266 (347)
T d1t2aa_         239 LMLQNDE--PEDFVIAT---GEVHSVREFVEKS  266 (347)
T ss_dssp             HHHHSSS--CCCEEECC---SCCEEHHHHHHHH
T ss_pred             HHhhcCC--Cccceecc---ccccccchhhhhh
Confidence            9998764  34577766   5777888777654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=5.5e-28  Score=200.30  Aligned_cols=217  Identities=24%  Similarity=0.294  Sum_probs=162.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCe--EEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFA--VKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++++|||||||||||+++++.|+++|++  |+.+.|++++.....    .+++++.+|+.| .+.+.+++++ +|+|||+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~----~~~~~~~~d~~~-~~~~~~~~~~-~d~vi~~   75 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG----GEADVFIGDITD-ADSINPAFQG-IDALVIL   75 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT----CCTTEEECCTTS-HHHHHHHHTT-CSEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc----CCcEEEEeeecc-cccccccccc-ceeeEEE
Confidence            3689999999999999999999999965  666788887665433    578999999999 8999999999 9999999


Q ss_pred             CCCCCCCC-----------------Ccchh-----HHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          143 TGFQPGWD-----------------LFAPW-----KAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       143 ag~~~~~~-----------------~~~~~-----~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      ++......                 .....     ..+++++.+.....+++.+.|+...+......       ......
T Consensus        76 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-------~~~~~~  148 (252)
T d2q46a1          76 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPL-------NKLGNG  148 (252)
T ss_dssp             CCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGG-------GGGGGC
T ss_pred             EeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCccc-------cccccc
Confidence            97532100                 00111     11788888888888999999987655432211       122344


Q ss_pred             HHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCCCceee-ccc---CccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEE
Q 022495          201 LTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIIM-ETE---DTLYEGTISRDQVAEVAVEALLHPESSYKVVEII  276 (296)
Q Consensus       201 ~y~~sK~~~e~~~~~~~~~~~~lrp~~i~g~~~~~~~~~-~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~  276 (296)
                      .|...+.+.+.+.++.+++++++||++++|+........ ...   .....++++++|+|++++.+++++...+++|+++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~  228 (252)
T d2q46a1         149 NILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLG  228 (252)
T ss_dssp             CHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEE
T ss_pred             chhhhhhhhhhhhhcccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEe
Confidence            577788888888889999999999999999865433222 111   1223568999999999999999998888999999


Q ss_pred             eCCCCCCCCHHHHHHHhh
Q 022495          277 SRVDAPKRSYEDLFGSIK  294 (296)
Q Consensus       277 ~~~~~~~~~~~el~~~i~  294 (296)
                      +.+.+...++.|+.+.+.
T Consensus       229 ~~~~~~~~~~~~~~~lf~  246 (252)
T d2q46a1         229 SKPEGTSTPTKDFKALFS  246 (252)
T ss_dssp             ECCTTTSCCCCCHHHHHT
T ss_pred             eCCCCCChhHHHHHHHHH
Confidence            876666666666665554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=2.1e-28  Score=217.84  Aligned_cols=227  Identities=14%  Similarity=0.113  Sum_probs=158.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC---c-------------ch----hhhcccCCCCCeEEEEcccCCCh
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD---L-------------DK----AKTTLSKDNPSLQIVKADVTEGS  125 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~---~-------------~~----~~~~~~~~~~~~~~~~~D~~d~~  125 (296)
                      ||+|||||||||||++|+++|+++|++|+++|.-   .             ..    ..........+++++.+|++| .
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD-F   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS-H
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC-H
Confidence            6899999999999999999999999999998621   0             00    000000123679999999999 8


Q ss_pred             HHHHHHhcC-CCCEEEEcCCCCCCC----CCcch-----hHH---HHHHHHHHHcCCC-EEEEEccceeccCccCccCC-
Q 022495          126 AKLSEAIGD-DSEAVVCATGFQPGW----DLFAP-----WKA---INLVEACRKRGVN-RFILISSILVNGAAMGQILN-  190 (296)
Q Consensus       126 ~~~~~~~~~-~~d~vv~~ag~~~~~----~~~~~-----~~~---~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~~~~-  190 (296)
                      +.+.+++++ ++|+|||+|+.....    +....     .++   .+++++|++.+++ ++++.||..+|+........ 
T Consensus        80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~  159 (393)
T d1i24a_          80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG  159 (393)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred             HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccc
Confidence            999999986 589999999864321    11111     111   8999999998854 68888888887654321110 


Q ss_pred             -----------hhhhhhhhhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc-------------------
Q 022495          191 -----------PAYIFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN-------------------  236 (296)
Q Consensus       191 -----------~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~-------------------  236 (296)
                                 ....+..|.+.|+.+|.++|.+++    +++++++++||+.+||+.....                   
T Consensus       160 ~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  239 (393)
T d1i24a_         160 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA  239 (393)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             cccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccc
Confidence                       011234567789999999998774    6799999999999999753211                   


Q ss_pred             -------------eeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          237 -------------IIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       237 -------------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                                   +.+.+.......++|++|+++++..+++++...+..+.+..  .++.+++.|+++.+.+
T Consensus       240 i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~--~~~~~si~el~~~i~~  309 (393)
T d1i24a_         240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQ--FTEQFSVNELASLVTK  309 (393)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEE--CSEEEEHHHHHHHHHH
T ss_pred             hhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecC--CCCeeEHHHHHHHHHH
Confidence                         00112223334689999999999999988776664333322  1467899999888754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3e-28  Score=213.21  Aligned_cols=226  Identities=18%  Similarity=0.190  Sum_probs=164.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch----------hhhcccCCCCCeEEEEcccCCChHHHHHHhcC-
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK----------AKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      .|||||||||||||++|+++|+++|++|+++++....          ..........++.++++|++| .+.+.+++.+ 
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~~   80 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILD-QGALQRLFKKY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHHC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccc-ccccccccccc
Confidence            3799999999999999999999999999999753211          111111134689999999999 8999988766 


Q ss_pred             CCCEEEEcCCCCCCCC----CcchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHH
Q 022495          135 DSEAVVCATGFQPGWD----LFAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIA  205 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~----~~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~s  205 (296)
                      .+++++|+|+......    +.....  +   .++++++++.++++|||+||+.+|+...............+.+.|+.+
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~  160 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHH
Confidence            5778999998654211    111111  1   899999999999999999999999877655444444344566789999


Q ss_pred             HHHHHHHHHH-----hCCcEEEEecCcccCCCCCCce-----------e----------------ecc-----cCccccC
Q 022495          206 KLQAEQYIRK-----SGINYTIIRPGGLRNEPPTGNI-----------I----------------MET-----EDTLYEG  248 (296)
Q Consensus       206 K~~~e~~~~~-----~~~~~~~lrp~~i~g~~~~~~~-----------~----------------~~~-----~~~~~~~  248 (296)
                      |..+|+.+++     .+++++++||+.+||+.....+           .                ...     .......
T Consensus       161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd  240 (346)
T d1ek6a_         161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD  240 (346)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence            9999987653     4899999999999997432110           0                000     0111235


Q ss_pred             CcCHHHHHHHHHHHhcC--CCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          249 TISRDQVAEVAVEALLH--PESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       249 ~i~~~Dva~~i~~~l~~--~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ++|++|+|.++..++..  ....+++||+++   +...++.|+++.|.+
T Consensus       241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~---~~~~s~~dl~~~i~~  286 (346)
T d1ek6a_         241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGT---GTGYSVLQMVQAMEK  286 (346)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECC---SCCEEHHHHHHHHHH
T ss_pred             EEEEEeccchhhhhccccccccCceEEEeCC---CCcccHHHHHHHHHH
Confidence            89999999998877543  233456889888   789999999999865

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=6.1e-28  Score=208.88  Aligned_cols=222  Identities=14%  Similarity=0.029  Sum_probs=167.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh--cc-cCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT--TL-SKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~  142 (296)
                      |+|||||||||||++|+++|+++|++|++++|.......  +. ....++++++++|++| .+.+.+.+.. ..++++|+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD-ACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC-HHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccC-hHHhhhhhccccccccccc
Confidence            689999999999999999999999999999997643211  00 0134679999999999 8888887765 57788888


Q ss_pred             CCCCCCCCC----cchhHH-----HHHHHHHHHcCC-CEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH
Q 022495          143 TGFQPGWDL----FAPWKA-----INLVEACRKRGV-NRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY  212 (296)
Q Consensus       143 ag~~~~~~~----~~~~~~-----~~~l~~~~~~~~-~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  212 (296)
                      |+.......    ......     .++++++++.++ ++|++.||..+|+.......+| ..+..+.+.|+.+|.++|.+
T Consensus        80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E-~~~~~p~~~Y~~sK~~~E~~  158 (321)
T d1rpna_          80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDE-NTPFYPRSPYGVAKLYGHWI  158 (321)
T ss_dssp             CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCT-TSCCCCCSHHHHHHHHHHHH
T ss_pred             cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCC-CCCccccChhHHHHHHHHHH
Confidence            875432111    111111     899999999884 4788888888887766655544 44567788999999999988


Q ss_pred             HH----HhCCcEEEEecCcccCCCCCCce-------------------eecccCccccCCcCHHHHHHHHHHHhcCCCCC
Q 022495          213 IR----KSGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAEVAVEALLHPESS  269 (296)
Q Consensus       213 ~~----~~~~~~~~lrp~~i~g~~~~~~~-------------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~  269 (296)
                      ++    +++++++++||+.+||+......                   ...+.......++|++|+|++++.+++++.  
T Consensus       159 ~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--  236 (321)
T d1rpna_         159 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--  236 (321)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred             HHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--
Confidence            75    47999999999999998533221                   111222333468999999999999998875  


Q ss_pred             CCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          270 YKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       270 ~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ...|++++   ++..++.++++++.+
T Consensus       237 ~~~~ni~~---~~~~s~~~~~~~~~~  259 (321)
T d1rpna_         237 ADDYVVAT---GVTTTVRDMCQIAFE  259 (321)
T ss_dssp             CCCEEECC---SCEEEHHHHHHHHHH
T ss_pred             cCCceecc---cccceehhhhHHHHH
Confidence            45799988   699999999998765

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2.4e-28  Score=213.96  Aligned_cols=225  Identities=16%  Similarity=0.195  Sum_probs=159.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh----hhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA----KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      |.||||||+||||++|+++|+++|++|+++++.....    .........+++++++|++| .+.+.+++.. ++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD-RKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC-HHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCC-HHHHHHHHhccCCCEEEE
Confidence            5799999999999999999999999999987643211    11111124679999999999 8999988863 4999999


Q ss_pred             cCCCCCCCCC----cchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccCC---hhhhhhhhhHHHHHHHHHH
Q 022495          142 ATGFQPGWDL----FAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQILN---PAYIFLNVFGLTLIAKLQA  209 (296)
Q Consensus       142 ~ag~~~~~~~----~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~---~~~~~~~~~~~y~~sK~~~  209 (296)
                      +|+.......    .....  .   .++++++++.++++||++||+.+||.....+..   .+..+..|.+.|+.+|.++
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~  160 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAI  160 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHH
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHH
Confidence            9986542111    11111  1   899999999999999999999999876543211   2234556778899999999


Q ss_pred             HHHHHH------hCCcEEEEecCcccCCCCCCce----------ee--------cccC--------------ccccCCcC
Q 022495          210 EQYIRK------SGINYTIIRPGGLRNEPPTGNI----------IM--------ETED--------------TLYEGTIS  251 (296)
Q Consensus       210 e~~~~~------~~~~~~~lrp~~i~g~~~~~~~----------~~--------~~~~--------------~~~~~~i~  251 (296)
                      |++++.      .+++++++||+.+||+...+.+          +.        ....              .....+++
T Consensus       161 E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~  240 (347)
T d1z45a2         161 ENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH  240 (347)
T ss_dssp             HHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEE
T ss_pred             HHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeee
Confidence            987753      4789999999999986432110          00        0000              01123566


Q ss_pred             HHHHHHHHHHHhcC------CCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          252 RDQVAEVAVEALLH------PESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       252 ~~Dva~~i~~~l~~------~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ..|.+.+++.++..      ....+.+||+++   ++++++.|+++.+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~---~~~~s~~e~~~~i~~  287 (347)
T d1z45a2         241 VVDLAKGHIAALQYLEAYNENEGLCREWNLGS---GKGSTVFEVYHAFCK  287 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC---SCCEEHHHHHHHHHH
T ss_pred             eecccccccccccccccccccccccccceecC---CCcccHHHHHHHHHH
Confidence            67777877776652      223456788877   799999999998865

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.2e-28  Score=200.69  Aligned_cols=198  Identities=17%  Similarity=0.233  Sum_probs=149.7

Q ss_pred             hhccCCCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           60 ENVSVKQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        60 ~~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      ..+.|++|+|||||||||||++|+++|+++|.  +|++++|++.+.....   ...+....+|+.+ .+.+.+++.+ +|
T Consensus         8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~---~~~i~~~~~D~~~-~~~~~~~~~~-~d   82 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---YKNVNQEVVDFEK-LDDYASAFQG-HD   82 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---GGGCEEEECCGGG-GGGGGGGGSS-CS
T ss_pred             HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc---cceeeeeeecccc-cccccccccc-cc
Confidence            34567889999999999999999999999994  8999999876543322   2578888999999 8999999999 99


Q ss_pred             EEEEcCCCCCCCCC-cchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHH
Q 022495          138 AVVCATGFQPGWDL-FAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQ  211 (296)
Q Consensus       138 ~vv~~ag~~~~~~~-~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~  211 (296)
                      ++|||+|....... ......     .+++++|++.++++||++||..++...              .+.|+.+|..+|+
T Consensus        83 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~--------------~~~Y~~~K~~~E~  148 (232)
T d2bkaa1          83 VGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS--------------NFLYLQVKGEVEA  148 (232)
T ss_dssp             EEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC--------------SSHHHHHHHHHHH
T ss_pred             cccccccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCc--------------cchhHHHHHHhhh
Confidence            99999986432111 111111     889999999999999999999776432              2458999999999


Q ss_pred             HHHHhCCc-EEEEecCcccCCCCCCcee-------ec--ccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 022495          212 YIRKSGIN-YTIIRPGGLRNEPPTGNII-------ME--TEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIIS  277 (296)
Q Consensus       212 ~~~~~~~~-~~~lrp~~i~g~~~~~~~~-------~~--~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~  277 (296)
                      .+++.+++ ++|||||.++|+.......       +.  +........++++|+|++++.++..+.. ++.+.+.+
T Consensus       149 ~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         149 KVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             HHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             ccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            99998885 8999999999975433210       01  1111223469999999999999988764 44555543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.95  E-value=2.8e-27  Score=209.84  Aligned_cols=226  Identities=17%  Similarity=0.128  Sum_probs=161.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHH-CCCeEEEEEcCc---------chhh---hc--------ccCCCCCeEEEEcccCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLA-KGFAVKAGVRDL---------DKAK---TT--------LSKDNPSLQIVKADVTEG  124 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~~r~~---------~~~~---~~--------~~~~~~~~~~~~~D~~d~  124 (296)
                      .|+||||||+||||++|+++|++ .|++|+++++-.         +...   ..        .......+.++.+|++| 
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-   80 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN-   80 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC-
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC-
Confidence            57999999999999999999996 689999987411         0000   00        01123568899999999 


Q ss_pred             hHHHHHHhcC--CCCEEEEcCCCCCCCC----CcchhH--H---HHHHHHHHHcCCCEEEEEccceeccCccCccC----
Q 022495          125 SAKLSEAIGD--DSEAVVCATGFQPGWD----LFAPWK--A---INLVEACRKRGVNRFILISSILVNGAAMGQIL----  189 (296)
Q Consensus       125 ~~~~~~~~~~--~~d~vv~~ag~~~~~~----~~~~~~--~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~----  189 (296)
                      .+.+.++++.  ++|+|||+|+......    ......  .   .++++++++.++++++++||..+|+.......    
T Consensus        81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  160 (383)
T d1gy8a_          81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA  160 (383)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccccccc
Confidence            8999888853  3899999998654221    111111  1   99999999999999999999998875443211    


Q ss_pred             --ChhhhhhhhhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCcee-------------------------
Q 022495          190 --NPAYIFLNVFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNII-------------------------  238 (296)
Q Consensus       190 --~~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~~-------------------------  238 (296)
                        ..+..+..|.+.|+.+|.+.|.+++    .++++++++||+.+||+.......                         
T Consensus       161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~  240 (383)
T d1gy8a_         161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ  240 (383)
T ss_dssp             CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred             cccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccc
Confidence              1123345678899999999999885    469999999999999975432110                         


Q ss_pred             ---------------ecc------cCccccCCcCHHHHHHHHHHHhcCC--------CCCCCeEEEEeCCCCCCCCHHHH
Q 022495          239 ---------------MET------EDTLYEGTISRDQVAEVAVEALLHP--------ESSYKVVEIISRVDAPKRSYEDL  289 (296)
Q Consensus       239 ---------------~~~------~~~~~~~~i~~~Dva~~i~~~l~~~--------~~~~~~~~i~~~~~~~~~~~~el  289 (296)
                                     ..+      .......++|++|+|++++.++...        ...+.+||+++   ++.+++.|+
T Consensus       241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s---~~~~s~~el  317 (383)
T d1gy8a_         241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT---SRGYSVREV  317 (383)
T ss_dssp             ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC---SCCEEHHHH
T ss_pred             cchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCC---CCceeHHHH
Confidence                           000      0111235799999999999888632        22345788877   789999999


Q ss_pred             HHHhhc
Q 022495          290 FGSIKQ  295 (296)
Q Consensus       290 ~~~i~~  295 (296)
                      ++.+.+
T Consensus       318 ~~~i~~  323 (383)
T d1gy8a_         318 IEVARK  323 (383)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=5.3e-27  Score=204.36  Aligned_cols=221  Identities=15%  Similarity=0.081  Sum_probs=157.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-----hhhccc----CCCCCeEEEEcccCCChHHHHHHhcC-CC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-----AKTTLS----KDNPSLQIVKADVTEGSAKLSEAIGD-DS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~-~~  136 (296)
                      |++||||||||||++|++.|+++|++|++++|..+.     ...+..    .....+.++.+|+++ .+.+.+.+.. ++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~-~~~~~~~~~~~~~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD-ASSLRRWIDVIKP   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTC-HHHHHHHHHHHCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccC-HHHHHHHHhhhcc
Confidence            799999999999999999999999999999996432     111111    123568899999999 8989888765 58


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-----HHHHHHHHHc-----CCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-----INLVEACRKR-----GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-----~~~l~~~~~~-----~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      |+|||+|+........    .....     .++++++++.     ...++++.||..+|+.... ..+| ..+..|.+.|
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~-~~~E-~~~~~p~~~Y  158 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSE-TTPFHPRSPY  158 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCT-TSCCCCCSHH
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCC-CCCC-CCCCCCcchh
Confidence            9999999875432111    11111     6666766543     2447888888877765543 2333 3456788899


Q ss_pred             HHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCce-------------------eecccCccccCCcCHHHHHHHH
Q 022495          203 LIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGNI-------------------IMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       203 ~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~~-------------------~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                      +.+|.++|.++.    +++++++++||+.+||+......                   ...+.......+++++|+|+++
T Consensus       159 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~  238 (339)
T d1n7ha_         159 AASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM  238 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHH
Confidence            999999998764    57999999999999998533221                   1112223334689999999999


Q ss_pred             HHHhcCCCCCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          260 VEALLHPESSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       260 ~~~l~~~~~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      ..+++.+..  ..+++..   +...++.++++.+.+
T Consensus       239 ~~~~~~~~~--~~~~~~~---~~~~s~~~~~~~~~~  269 (339)
T d1n7ha_         239 WLMLQQEKP--DDYVVAT---EEGHTVEEFLDVSFG  269 (339)
T ss_dssp             HHHHTSSSC--CEEEECC---SCEEEHHHHHHHHHH
T ss_pred             HHHHhcCCC--Ccccccc---ccccccchhhhhhhh
Confidence            999998753  3455555   577899998887754

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=2.4e-26  Score=190.77  Aligned_cols=201  Identities=18%  Similarity=0.143  Sum_probs=147.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      .|++|+++||||+++||+++|+.|+++|++|++.+|++++.++.......++.++++|++| .++++++++.      ++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCC-HHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999999988776554344678999999999 7777665543      59


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||........    +.+..             +.+++.|++.+.++||++||...+...            ...
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------------~~~  149 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT------------VAC  149 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TTB
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc------------ccc
Confidence            9999999975432211    11211             778888888877899999999754322            225


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC--CCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE--SSY  270 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~  270 (296)
                      ..|+.+|++.+.+.+       ++||+++.|.||.+.++........ ........+..++|+|++++.++.+..  ..|
T Consensus       150 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG  228 (244)
T d1nffa_         150 HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-IFQTALGRAAEPVEVSNLVVYLASDESSYSTG  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             cchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-HHhccccCCCCHHHHHHHHHHHhChhhCCCcC
Confidence            679999999998775       4689999999999988653221100 011111236889999999888875322  345


Q ss_pred             CeEEEEe
Q 022495          271 KVVEIIS  277 (296)
Q Consensus       271 ~~~~i~~  277 (296)
                      +++.+.+
T Consensus       229 ~~i~vDG  235 (244)
T d1nffa_         229 AEFVVDG  235 (244)
T ss_dssp             CEEEEST
T ss_pred             CEEEECC
Confidence            5665543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.5e-26  Score=199.66  Aligned_cols=209  Identities=15%  Similarity=0.170  Sum_probs=154.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag  144 (296)
                      .|+|||||||||||++|+++|+++|+.|+++++..                 ++|+.| .+.+.+++.. .+|.|+|+|+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------~~~~~~-~~~~~~~~~~~~~d~v~~~a~   63 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------ELNLLD-SRAVHDFFASERIDQVYLAAA   63 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------TCCTTC-HHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------hccccC-HHHHHHHHhhcCCCEEEEcch
Confidence            57999999999999999999999999988754322                 158999 8888888765 6999999997


Q ss_pred             CCCCC-----CCcch--hHH---HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh----hhhhhHHHHHHHHHHH
Q 022495          145 FQPGW-----DLFAP--WKA---INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI----FLNVFGLTLIAKLQAE  210 (296)
Q Consensus       145 ~~~~~-----~~~~~--~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~----~~~~~~~y~~sK~~~e  210 (296)
                      .....     .....  .++   .+++++|++.++++|||+||+++||.....+.+|...    +..+.+.|+.+|.++|
T Consensus        64 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  143 (315)
T d1e6ua_          64 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGI  143 (315)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHH
T ss_pred             hccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHH
Confidence            54321     11111  111   8999999999999999999999999776655554322    2334567999999999


Q ss_pred             HHHH----HhCCcEEEEecCcccCCCCCCc------------------------eeecccCccccCCcCHHHHHHHHHHH
Q 022495          211 QYIR----KSGINYTIIRPGGLRNEPPTGN------------------------IIMETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       211 ~~~~----~~~~~~~~lrp~~i~g~~~~~~------------------------~~~~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      ++++    +.+++++++||+.+||+.....                        +...........+++++|+++++..+
T Consensus       144 ~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~  223 (315)
T d1e6ua_         144 KLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV  223 (315)
T ss_dssp             HHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHh
Confidence            8874    5699999999999999754221                        01111222334689999999999998


Q ss_pred             hcCCC--------CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          263 LLHPE--------SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       263 l~~~~--------~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +....        .....++++.   +...++.++++.+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~i~~  261 (315)
T d1e6ua_         224 MELAHEVWLENTQPMLSHINVGT---GVDCTIRELAQTIAK  261 (315)
T ss_dssp             HHSCHHHHHHTSBTTBCCEEESC---SCCEEHHHHHHHHHH
T ss_pred             hhhccccccccccccccccccCC---CcchHHHHHHHHHHH
Confidence            86542        2334677766   688899999988754

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.94  E-value=3.4e-26  Score=190.91  Aligned_cols=202  Identities=14%  Similarity=0.097  Sum_probs=146.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      +|++|++|||||+++||+++|++|+++|++|++.+|+.++..+.......++.++++|++| .++++++++.      ++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCC-HHHHHHHHHHHHHHcCCc
Confidence            5789999999999999999999999999999999999988776655455679999999999 7777665532      49


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||+.......    +.+..             +.+++.|++.+.++||++||...+...            ...
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~------------~~~  148 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL------------ALT  148 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TTC
T ss_pred             cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc------------cch
Confidence            9999999976543211    11111             888888888888899999999754322            225


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc---eeecccCccccC-C-cCHHHHHHHHHHHhcCCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN---IIMETEDTLYEG-T-ISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~~~~~-~-i~~~Dva~~i~~~l~~~~  267 (296)
                      ..|+.+|++++.+.+       ++|++++.|.||++.++.....   ...........+ + ..++|+|++++.++.+..
T Consensus       149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a  228 (254)
T d1hdca_         149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhh
Confidence            679999999998765       3689999999999987532110   000001111122 2 358999999888875332


Q ss_pred             --CCCCeEEEEe
Q 022495          268 --SSYKVVEIIS  277 (296)
Q Consensus       268 --~~~~~~~i~~  277 (296)
                        ..|+++.+.+
T Consensus       229 ~~itG~~i~vDG  240 (254)
T d1hdca_         229 SYVTGAELAVDG  240 (254)
T ss_dssp             TTCCSCEEEEST
T ss_pred             CCCCCceEEeCC
Confidence              3556666644

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.5e-26  Score=192.13  Aligned_cols=202  Identities=16%  Similarity=0.157  Sum_probs=146.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|+++||||+++||+++|+.|+++|++|++.+|+++++++.......++..+.+|++| .+.++++++.      ++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD-PASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHTCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC-HHHhhhhhhhhhcccCCc
Confidence            4689999999999999999999999999999999999887765543334578899999999 7777665543      59


Q ss_pred             CEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||........+    .+..             +.+++.|++.+-++||++||...+..            ....
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~------------~~~~  147 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG------------NGGQ  147 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC------------CTTC
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC------------CCCC
Confidence            99999999765433211    1111             88889998888789999999865422            1235


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---ecccCcc-ccCCcCHHHHHHHHHHHhcCCC-
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---METEDTL-YEGTISRDQVAEVAVEALLHPE-  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~~~~~~~-~~~~i~~~Dva~~i~~~l~~~~-  267 (296)
                      ..|+.+|++++.+.+       ++|++++.|.||.+.++.......   ....... ...+..++|+|++++.++.+.. 
T Consensus       148 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  227 (243)
T d1q7ba_         148 ANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA  227 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            679999999998765       369999999999998764221110   0000111 1236789999999888885432 


Q ss_pred             -CCCCeEEEEe
Q 022495          268 -SSYKVVEIIS  277 (296)
Q Consensus       268 -~~~~~~~i~~  277 (296)
                       ..|+++.+.+
T Consensus       228 ~itGq~i~vdG  238 (243)
T d1q7ba_         228 YITGETLHVNG  238 (243)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCcCCeEEECC
Confidence             3555555543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=3.4e-26  Score=196.35  Aligned_cols=217  Identities=18%  Similarity=0.215  Sum_probs=163.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh-----hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK-----TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      .+||||||||||||++|+++|+++|++|++++|++....     ........+++++++|++| .+.+.+.+.+ +++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d-~~~~~~~~~~-~~~~~   80 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD-HQRLVDALKQ-VDVVI   80 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSC-HHHHHHHHTT-CSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeeccc-chhhhhhccC-cchhh
Confidence            568999999999999999999999999999999864321     1111134679999999999 8999999999 99999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcE
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINY  220 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~  220 (296)
                      ++++......  ......++++++++.+..++++.||.+++......       +..+...|...|..++++.++.++++
T Consensus        81 ~~~~~~~~~~--~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (312)
T d1qyda_          81 SALAGGVLSH--HILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEH-------ALQPGSITFIDKRKVRRAIEAASIPY  151 (312)
T ss_dssp             ECCCCSSSST--TTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCC-------CCSSTTHHHHHHHHHHHHHHHTTCCB
T ss_pred             hhhhhccccc--chhhhhHHHHHHHHhcCCcEEEEeeccccCCCccc-------ccchhhhhhHHHHHHHHhhcccccce
Confidence            9987543221  22223788899999887788888887665433222       23345567889999999999999999


Q ss_pred             EEEecCcccCCCCC-------------CceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCHH
Q 022495          221 TIIRPGGLRNEPPT-------------GNIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYE  287 (296)
Q Consensus       221 ~~lrp~~i~g~~~~-------------~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~~  287 (296)
                      +++||+.++|+...             ..............+++++|+|++++.++.++...+++++....  ++.+|++
T Consensus       152 ~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~--~~~~s~~  229 (312)
T d1qyda_         152 TYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPP--MNILSQK  229 (312)
T ss_dssp             CEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCG--GGEEEHH
T ss_pred             EEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCC--CcCCCHH
Confidence            99999999884211             11122223344456899999999999999998877776554432  5778999


Q ss_pred             HHHHHhhc
Q 022495          288 DLFGSIKQ  295 (296)
Q Consensus       288 el~~~i~~  295 (296)
                      |+++.+++
T Consensus       230 e~~~~~~~  237 (312)
T d1qyda_         230 EVIQIWER  237 (312)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998875

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.94  E-value=1.1e-25  Score=187.49  Aligned_cols=201  Identities=15%  Similarity=0.173  Sum_probs=139.2

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-hhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      |++|+++||||+++||+++|+.|+++|++|++.+|++.+. .+.......++.++.+|++| .++++++++.      ++
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999999987543 23333345789999999999 7777665532      49


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||+.......    +.+..             +.+++.|++.+-++||++||.......            ...
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------~~~  149 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI------------EAY  149 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC------------SSC
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC------------ccc
Confidence            9999999976543211    11211             888999998888899999998754322            124


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------ccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------TEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ..|+.+|++.+.+.+       .+|++++.|.||++.++.........      ........+..++|+|++++.++.+.
T Consensus       150 ~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~  229 (247)
T d2ew8a1         150 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGG
T ss_pred             ccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCch
Confidence            679999999997765       46899999999999887543221110      01111123668999999988777532


Q ss_pred             C--CCCCeEEEEe
Q 022495          267 E--SSYKVVEIIS  277 (296)
Q Consensus       267 ~--~~~~~~~i~~  277 (296)
                      .  ..|+++.+.+
T Consensus       230 s~~itG~~i~vDG  242 (247)
T d2ew8a1         230 ASFITGQTLAVDG  242 (247)
T ss_dssp             GTTCCSCEEEESS
T ss_pred             hcCCcCCeEEECC
Confidence            2  3455555543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=2.4e-25  Score=185.72  Aligned_cols=203  Identities=16%  Similarity=0.109  Sum_probs=145.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      |++++|++|||||+++||+++|+.|+++|++|++.+|+++++++.   +.....++.++.+|++| .+.+.++++.    
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~   84 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTE   84 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHh
Confidence            678899999999999999999999999999999999998766542   23345679999999999 7777766542    


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|++|||||........    +.+..             +.+++.|++.+.++||++||...+..            
T Consensus        85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~------------  152 (251)
T d2c07a1          85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG------------  152 (251)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC------------
T ss_pred             cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC------------
Confidence              599999999975433211    12221             78888898888889999999865422            


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---ecccCcc-ccCCcCHHHHHHHHHHHhc
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---METEDTL-YEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~~~~~~~-~~~~i~~~Dva~~i~~~l~  264 (296)
                      ......|+.+|++++.+.+       .+||+++.|.||.+.++.......   ....... ...+..++|+|++++.++.
T Consensus       153 ~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S  232 (251)
T d2c07a1         153 NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSS  232 (251)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            1224679999999998765       468999999999999875432110   0000111 1236789999999888775


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      +..  ..|+++.+.+
T Consensus       233 ~~s~~itG~~i~vDG  247 (251)
T d2c07a1         233 DKSGYINGRVFVIDG  247 (251)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             chhCCCcCcEEEECC
Confidence            432  3455555543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.93  E-value=7.2e-26  Score=189.75  Aligned_cols=191  Identities=16%  Similarity=0.117  Sum_probs=127.5

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhc----
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIG----  133 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~----  133 (296)
                      .|+|++|++|||||+++||+++|+.|+++|++|++.+|+++++++..   .....++.++.+|++| .+.++++++    
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   81 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSS   81 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999987765432   2244679999999999 766655442    


Q ss_pred             ---CCCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          134 ---DDSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       134 ---~~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                         +++|++|||||........    +.+..             +.+++.|++.+.++||++||......          
T Consensus        82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~----------  151 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS----------  151 (259)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred             HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc----------
Confidence               2599999999975432211    11111             88888888888889999999865322          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc----cCcc-ccCCcCHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET----EDTL-YEGTISRDQVAEVAVE  261 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~----~~~~-~~~~i~~~Dva~~i~~  261 (296)
                        ......|+.+|.+++.+.+       .+||+++.|.||.+.++..........    .... ...+..++|+|.+++.
T Consensus       152 --~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f  229 (259)
T d1xq1a_         152 --ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAF  229 (259)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHH
T ss_pred             --ccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence              1224569999999998765       368999999999998875432211000    0011 1235689999999887


Q ss_pred             Hhc
Q 022495          262 ALL  264 (296)
Q Consensus       262 ~l~  264 (296)
                      ++.
T Consensus       230 L~S  232 (259)
T d1xq1a_         230 LCM  232 (259)
T ss_dssp             HTS
T ss_pred             HhC
Confidence            764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=6.5e-26  Score=189.16  Aligned_cols=203  Identities=16%  Similarity=0.177  Sum_probs=144.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----cCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      |++++|+++||||+++||+++|+.|+++|++|++.+|+.++..+..    .....++.++.+|++| .+.++++++.   
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC-HHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999987655322    1234678899999999 7776665543   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         ++|++|||||+.......    +.+..             +.+++.|++.+.+++|++||.......          
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~----------  149 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT----------  149 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC----------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc----------
Confidence               499999999975443221    11111             888899988888899999997532111          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-----cC-ccccCCcCHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----ED-TLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-----~~-~~~~~~i~~~Dva~~i~~  261 (296)
                       ......|+.+|++++.+.+       ++|++++.|.||++.++........+.     .. .....+..++|+|++++.
T Consensus       150 -~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f  228 (251)
T d1vl8a_         150 -MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVF  228 (251)
T ss_dssp             -SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred             -CccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence             1124679999999998765       368999999999999876432111000     00 111236689999999887


Q ss_pred             HhcCCC--CCCCeEEEE
Q 022495          262 ALLHPE--SSYKVVEII  276 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~  276 (296)
                      ++.+..  ..|+++.+-
T Consensus       229 L~S~~a~~itG~~i~vD  245 (251)
T d1vl8a_         229 LASEEAKYVTGQIIFVD  245 (251)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCchhCCCcCcEEEeC
Confidence            775432  245555553

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.93  E-value=1.5e-25  Score=187.68  Aligned_cols=206  Identities=14%  Similarity=0.171  Sum_probs=144.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      .+++|+++||||+++||+++|+.|+++|++|++.+|+.+++++.......++.++.+|++| .++++++++.      ++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTD-QASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCC-HHHHHHHHHHHHHHhCCc
Confidence            4679999999999999999999999999999999999887776554445789999999999 7777766543      59


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHc-CCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-------------INLVEACRKR-GVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |++|||||........    +.+..             +.+++.+.+. ..++||++||...+...            ..
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------------~~  148 (256)
T d1k2wa_          81 DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE------------AL  148 (256)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------TT
T ss_pred             cEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc------------cc
Confidence            9999999975533211    11111             6667665544 35799999998754321            22


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-------ecc-------cCc-cccCCcCHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------MET-------EDT-LYEGTISRDQVA  256 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-------~~~-------~~~-~~~~~i~~~Dva  256 (296)
                      ...|+.+|++.+.+.+       .+||+++.|.||.+.++.......       ...       ... ....+..++|+|
T Consensus       149 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA  228 (256)
T d1k2wa_         149 VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLT  228 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHH
T ss_pred             ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHH
Confidence            5679999999998765       468999999999999875221100       000       000 112367899999


Q ss_pred             HHHHHHhcCCC--CCCCeEEEEeCCCCCCC
Q 022495          257 EVAVEALLHPE--SSYKVVEIISRVDAPKR  284 (296)
Q Consensus       257 ~~i~~~l~~~~--~~~~~~~i~~~~~~~~~  284 (296)
                      .+++.++....  ..|+++.+-+   |..+
T Consensus       229 ~~v~fL~S~~a~~iTG~~i~vDG---G~~m  255 (256)
T d1k2wa_         229 GMAIFLATPEADYIVAQTYNVDG---GNWM  255 (256)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEEST---TSSC
T ss_pred             HHHHHHhCchhCCccCceEEECc---chhh
Confidence            99887664322  2445555433   5544

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=9.6e-26  Score=188.56  Aligned_cols=203  Identities=16%  Similarity=0.148  Sum_probs=144.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +.+++|++|||||+++||+++|+.|+++|++|++.+|+++++++..   .....++.++++|++| .++++++++.    
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~-~~~~~~~~~~~~~~   85 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISK   85 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999987665432   2245689999999999 7776655432    


Q ss_pred             --CCCEEEEcCCCCCCCCCc---chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF---APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~---~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                        ++|++|||||........   +.+..             +.+++.+++.+-++||++||...+...            
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~------------  153 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN------------  153 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC------------
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc------------
Confidence              499999999975432211   11211             788888888887899999998654322            


Q ss_pred             hhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee----cc-cCccccCCcCHHHHHHHHHHHhc
Q 022495          197 NVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM----ET-EDTLYEGTISRDQVAEVAVEALL  264 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~----~~-~~~~~~~~i~~~Dva~~i~~~l~  264 (296)
                      .....|+.+|++.+.+.+       ++||+++.|.||.+.++........    .. .......+..++|+|++++.++.
T Consensus       154 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S  233 (255)
T d1fmca_         154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCS  233 (255)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHS
T ss_pred             cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            225679999999998765       3689999999999987632211100    00 00111236789999999888775


Q ss_pred             CCC--CCCCeEEEEe
Q 022495          265 HPE--SSYKVVEIIS  277 (296)
Q Consensus       265 ~~~--~~~~~~~i~~  277 (296)
                      +..  ..|+++.+.+
T Consensus       234 ~~s~~itG~~i~vDG  248 (255)
T d1fmca_         234 PAASWVSGQILTVSG  248 (255)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             chhcCCcCCEEEECc
Confidence            322  3455555544

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=3.6e-25  Score=183.58  Aligned_cols=199  Identities=17%  Similarity=0.134  Sum_probs=143.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      .|++|+++||||+++||+++|+.|+++|++|++.+|+++++++...  ..++.++.+|++| .++++++++.      ++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~--~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE--AVGAHPVVMDVAD-PASVERGFAEALAHLGRL   78 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--TTTCEEEECCTTC-HHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HcCCeEEEEecCC-HHHHHHHHHHHHHhcCCc
Confidence            4689999999999999999999999999999999999888776543  3467899999999 7777766543      59


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||+.......    +.+..             +.+++.+++.+.+.++++||....+             ....
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~-------------~~~~  145 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG-------------NLGQ  145 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC-------------CTTC
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC-------------CCCC
Confidence            9999999976533211    11111             7888888888877888888864322             1224


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc----cCccccCCcCHHHHHHHHHHHhcCCC-
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET----EDTLYEGTISRDQVAEVAVEALLHPE-  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~----~~~~~~~~i~~~Dva~~i~~~l~~~~-  267 (296)
                      ..|+.+|++.+.+.+       .+|++++.|.||.+.++..........    .......+..++|+|++++.++.+.. 
T Consensus       146 ~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~  225 (242)
T d1ulsa_         146 ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESS  225 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhC
Confidence            679999999998765       368999999999999876433211000    00111235689999999888775432 


Q ss_pred             -CCCCeEEEEe
Q 022495          268 -SSYKVVEIIS  277 (296)
Q Consensus       268 -~~~~~~~i~~  277 (296)
                       ..|+++.+.+
T Consensus       226 ~itG~~i~vDG  236 (242)
T d1ulsa_         226 FITGQVLFVDG  236 (242)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCCCcEEEECC
Confidence             3455555543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=3.3e-25  Score=183.16  Aligned_cols=194  Identities=18%  Similarity=0.157  Sum_probs=138.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      ++++|++|||||+++||+++++.|+++|++|++.+|+.+..        .++..+++|++| .++++++++.      ++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------KGLFGVEVDVTD-SDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------TTSEEEECCTTC-HHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh--------cCceEEEEecCC-HHHHHHHHHHHHHhcCCc
Confidence            57899999999999999999999999999999999987643        467889999999 7777665543      59


Q ss_pred             CEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||+......    .+.+..             +.+++.+++.+.++||++||.......            ...
T Consensus        75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~------------~~~  142 (237)
T d1uzma1          75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI------------GNQ  142 (237)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------CC
T ss_pred             eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC------------ccc
Confidence            999999997543221    112211             788899999988899999998754321            225


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc---eeecccCc-cccCCcCHHHHHHHHHHHhcCCC-
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN---IIMETEDT-LYEGTISRDQVAEVAVEALLHPE-  267 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~---~~~~~~~~-~~~~~i~~~Dva~~i~~~l~~~~-  267 (296)
                      ..|+.+|++++.+.+       .+|++++.|.||.+.++.....   ........ ....+..++|+|++++.++.+.. 
T Consensus       143 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  222 (237)
T d1uzma1         143 ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDAS  222 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            679999999998765       3689999999999988642211   00000011 11236789999999888775432 


Q ss_pred             -CCCCeEEEEe
Q 022495          268 -SSYKVVEIIS  277 (296)
Q Consensus       268 -~~~~~~~i~~  277 (296)
                       ..|+++.+.+
T Consensus       223 ~itG~~i~vdG  233 (237)
T d1uzma1         223 YISGAVIPVDG  233 (237)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCcCCeEEECC
Confidence             3455555533

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=2.4e-25  Score=185.26  Aligned_cols=197  Identities=14%  Similarity=0.119  Sum_probs=139.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      ++||++|||||+++||+++|+.|+++|++|++.+|+++..+...   ..+..++++|++| .++++++++.      ++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~---~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE---AIGGAFFQVDLED-ERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH---HHTCEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HcCCeEEEEeCCC-HHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999999976543221   1356789999999 7766665543      599


Q ss_pred             EEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          138 AVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      ++|||||+.......    +.+..             +.+++.|++.+-++||++||...+...            ....
T Consensus        79 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~------------~~~~  146 (248)
T d2d1ya1          79 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE------------QENA  146 (248)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC------------TTBH
T ss_pred             eEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc------------cccc
Confidence            999999975432211    11111             888899988887899999999754322            2356


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--------e-cccC-ccccCCcCHHHHHHHHHHHh
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--------M-ETED-TLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--------~-~~~~-~~~~~~i~~~Dva~~i~~~l  263 (296)
                      .|+.+|++++.+.+       .+|++++.|.||.+.++.......        . .... .....+..++|+|++++.++
T Consensus       147 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~  226 (248)
T d2d1ya1         147 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            79999999998765       369999999999998753211100        0 0000 11123678999999988777


Q ss_pred             cCCC--CCCCeEEEE
Q 022495          264 LHPE--SSYKVVEII  276 (296)
Q Consensus       264 ~~~~--~~~~~~~i~  276 (296)
                      .+..  ..|+++.+-
T Consensus       227 S~~s~~itG~~i~vD  241 (248)
T d2d1ya1         227 SEKASFITGAILPVD  241 (248)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CchhcCCCCcEEEcC
Confidence            5322  345555553

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=2.3e-25  Score=184.74  Aligned_cols=200  Identities=13%  Similarity=0.085  Sum_probs=143.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv  140 (296)
                      +++||++|||||+++||+++++.|+++|++|++.+|+++++.+... ...++.++.+|++| .+.++++++.  ++|++|
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~-~~~~~~~~~~Dv~~-~~~v~~~~~~~g~iDilV   79 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK-ECPGIEPVCVDLGD-WDATEKALGGIGPVDLLV   79 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HSTTCEEEECCTTC-HHHHHHHHTTCCCCSEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hcCCCeEEEEeCCC-HHHHHHHHHHcCCCeEEE
Confidence            5789999999999999999999999999999999999887765543 33578999999999 8999888875  699999


Q ss_pred             EcCCCCCCCCCc----chhHH-------------HHHHHHHHHc-CCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          141 CATGFQPGWDLF----APWKA-------------INLVEACRKR-GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       141 ~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      ||||........    +.+..             +.+++.+.+. +.+++|++||...+...            .....|
T Consensus        80 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~~~~Y  147 (242)
T d1cyda_          80 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------------PNLITY  147 (242)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TTBHHH
T ss_pred             ECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC------------Cccccc
Confidence            999975432211    11111             5666665444 45799999998654322            225679


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc-----eeecccC-ccccCCcCHHHHHHHHHHHhcCCC--
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN-----IIMETED-TLYEGTISRDQVAEVAVEALLHPE--  267 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~-----~~~~~~~-~~~~~~i~~~Dva~~i~~~l~~~~--  267 (296)
                      +.+|++++.+.+       .+|++++.|.||++.++.....     ....... .....+..++|+|++++.++.+..  
T Consensus       148 ~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~  227 (242)
T d1cyda_         148 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAS  227 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             cchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            999999998775       3689999999999987632110     0000000 111236789999999888775422  


Q ss_pred             CCCCeEEEE
Q 022495          268 SSYKVVEII  276 (296)
Q Consensus       268 ~~~~~~~i~  276 (296)
                      ..|+++.+.
T Consensus       228 itG~~i~vD  236 (242)
T d1cyda_         228 TSGGGILVD  236 (242)
T ss_dssp             CCSSEEEES
T ss_pred             cCCceEEeC
Confidence            345555553

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-25  Score=185.25  Aligned_cols=200  Identities=13%  Similarity=0.103  Sum_probs=143.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv  140 (296)
                      .|+||++|||||+++||+++|+.|+++|++|++.+|+++++.+... ...++..+.+|++| .+.++++++.  ++|++|
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~~~Dv~d-~~~v~~~~~~~g~iDilV   81 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR-ECPGIEPVCVDLGD-WEATERALGSVGPVDLLV   81 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HSTTCEEEECCTTC-HHHHHHHHTTCCCCCEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH-hcCCCeEEEEeCCC-HHHHHHHHHHhCCceEEE
Confidence            5789999999999999999999999999999999999888765543 23578899999999 8989888876  799999


Q ss_pred             EcCCCCCCCCCc----chhHH-------------HHHHHHHH-HcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          141 CATGFQPGWDLF----APWKA-------------INLVEACR-KRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       141 ~~ag~~~~~~~~----~~~~~-------------~~~l~~~~-~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      ||||........    +.+..             +.+++.+. +.+.++||++||.......            .....|
T Consensus        82 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~------------~~~~~Y  149 (244)
T d1pr9a_          82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------------TNHSVY  149 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TTBHHH
T ss_pred             eccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc------------cchhhh
Confidence            999976533211    11111             77777544 4456799999998754322            224679


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-----cccCc-cccCCcCHHHHHHHHHHHhcCCC--
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETEDT-LYEGTISRDQVAEVAVEALLHPE--  267 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-----~~~~~-~~~~~i~~~Dva~~i~~~l~~~~--  267 (296)
                      +.+|++.+.+.+       .+||+++.|.||.+.++.......-     ..... ....+..++|+|++++.++.+..  
T Consensus       150 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  229 (244)
T d1pr9a_         150 CSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGM  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            999999998765       3689999999999988642211100     00011 11236789999999887775322  


Q ss_pred             CCCCeEEEE
Q 022495          268 SSYKVVEII  276 (296)
Q Consensus       268 ~~~~~~~i~  276 (296)
                      ..|+++.+-
T Consensus       230 itG~~i~vD  238 (244)
T d1pr9a_         230 TTGSTLPVE  238 (244)
T ss_dssp             CCSCEEEES
T ss_pred             cCCcEEEEC
Confidence            344555443

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.93  E-value=9.9e-25  Score=182.63  Aligned_cols=203  Identities=15%  Similarity=0.097  Sum_probs=143.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      |+|++|++|||||+++||+++++.|+++|++|++.+|+++++++..   ......+.++.+|++| .+.++++++.    
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC-HHHHHHHHHHHHHH
Confidence            6889999999999999999999999999999999999987655432   2345678899999999 7776655432    


Q ss_pred             ---CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 ---DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                         .+|++|||||........+    .+..             +.+++.+++.+.+++|++||.......          
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~----------  150 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL----------  150 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC----------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc----------
Confidence               5899999999765443221    1111             677788888888899999999754322          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccC----------ccccCCcCHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETED----------TLYEGTISRDQVAE  257 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~----------~~~~~~i~~~Dva~  257 (296)
                        .....|+.+|.+.+.+.+       +.||++++|.||.+.++............          .....+..++|+|.
T Consensus       151 --~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~  228 (258)
T d1ae1a_         151 --PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSA  228 (258)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHH
T ss_pred             --ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence              225679999999998765       36899999999999987543322111000          01123679999999


Q ss_pred             HHHHHhcCC--CCCCCeEEEEe
Q 022495          258 VAVEALLHP--ESSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~--~~~~~~~~i~~  277 (296)
                      +++.++.+.  ...|+++.+-+
T Consensus       229 ~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         229 LIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhChhhCCCcCcEEEeCC
Confidence            988888432  23555555543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.93  E-value=1.3e-25  Score=188.29  Aligned_cols=203  Identities=14%  Similarity=0.108  Sum_probs=144.3

Q ss_pred             hccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           61 NVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        61 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .|+|++|++|||||+++||+++|+.|+++|++|++.+|+++++++..   .....++.++.+|++| .+.++++++.   
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~   81 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVAN   81 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC-HHHHHHHHHHHHH
Confidence            37889999999999999999999999999999999999987766433   2245678899999999 7776655432   


Q ss_pred             ----CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 ----DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                          ++|++|||||........+    .+..             +.+++.+++.+.++||++||.......         
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------  152 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV---------  152 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC---------
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc---------
Confidence                5999999999755432211    1111             778888888887899999998653221         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee-------ec-c-cCccccCCcCHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII-------ME-T-EDTLYEGTISRDQVAE  257 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~-------~~-~-~~~~~~~~i~~~Dva~  257 (296)
                         .....|+.+|++.+.+.+       .++|+++.|.||.+.++.......       .. . .......+..++|+|+
T Consensus       153 ---~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~  229 (259)
T d2ae2a_         153 ---PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAA  229 (259)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHH
T ss_pred             ---ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence               125679999999998775       368999999999998753211000       00 0 0011123678999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEE
Q 022495          258 VAVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~  276 (296)
                      +++.++.+..  ..|+++.+.
T Consensus       230 ~v~fL~S~~s~~itG~~i~VD  250 (259)
T d2ae2a_         230 MVAFLCFPAASYVTGQIIYVD  250 (259)
T ss_dssp             HHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhCchhCCCcCcEEEEC
Confidence            9887775322  244555543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.93  E-value=3.4e-25  Score=185.52  Aligned_cols=201  Identities=14%  Similarity=0.134  Sum_probs=141.4

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc-----CCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.+++++...     ....++.++.+|++| .++++++++.    
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER   80 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC-HHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999999876553221     134578899999999 7777665532    


Q ss_pred             --CCCEEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|++|||||+.......     +.+..             +.+++.|++.+-++||++||...+...          
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------  150 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI----------  150 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC----------
Confidence              499999999975432211     12221             778888888888899999998754321          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-----------cccCc-cccCCcCHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----------ETEDT-LYEGTISRDQV  255 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-----------~~~~~-~~~~~i~~~Dv  255 (296)
                        .....|+.+|++++.+.+       ++||+++.|.||.+.++........           ..... ....+..++|+
T Consensus       151 --~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dv  228 (258)
T d1iy8a_         151 --GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEI  228 (258)
T ss_dssp             --SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHH
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHH
Confidence              225679999999987764       4689999999999987632111100           00000 11236789999


Q ss_pred             HHHHHHHhcCCC--CCCCeEEEEe
Q 022495          256 AEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       256 a~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |++++.++.+..  ..|+++.+.+
T Consensus       229 A~~v~fL~S~~s~~itG~~i~VDG  252 (258)
T d1iy8a_         229 AAVVAFLLSDDASYVNATVVPIDG  252 (258)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhcCCcCceEEcCc
Confidence            999887775322  2444555443

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.5e-25  Score=184.37  Aligned_cols=200  Identities=16%  Similarity=0.108  Sum_probs=141.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      .+++|++|||||+++||+++++.|+++|++|++.+|+++.+++... ...++.++.+|++| .++++++++.      ++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~-~~~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQ-ELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hcCCCeEEEccCCC-HHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999999999999999999999887765443 23578999999999 7777766543      59


Q ss_pred             CEEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |++|||||........     +.+..             +.+++.|++.+ ++||++||...+..            ...
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~------------~~~  147 (250)
T d1ydea1          81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIG------------QAQ  147 (250)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHC------------CTT
T ss_pred             CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCccccccccccc------------ccC
Confidence            9999999965332211     11211             78888888765 79999999875322            223


Q ss_pred             hHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--------ee-cc-cCccccCCcCHHHHHHHHHH
Q 022495          199 FGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--------IM-ET-EDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--------~~-~~-~~~~~~~~i~~~Dva~~i~~  261 (296)
                      ...|+.+|++++.+.+       .+||+++.|.||+|.++......        .. .. .......+..++|+|++++.
T Consensus       148 ~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~f  227 (250)
T d1ydea1         148 AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVF  227 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred             cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            5679999999998765       46899999999999875321100        00 00 00111236789999999988


Q ss_pred             HhcCC-CCCCCeEEEEe
Q 022495          262 ALLHP-ESSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~-~~~~~~~~i~~  277 (296)
                      ++.+. ...|+++.+-+
T Consensus       228 L~Sda~~itG~~i~vDG  244 (250)
T d1ydea1         228 LASEANFCTGIELLVTG  244 (250)
T ss_dssp             HHHHCTTCCSCEEEEST
T ss_pred             HhCccCCCcCCeEEECC
Confidence            77431 12444444433

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8e-26  Score=189.12  Aligned_cols=207  Identities=16%  Similarity=0.155  Sum_probs=147.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cC--CCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SK--DNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~--~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      +||++|||||+++||+++|+.|+++|++|++.+|+.++..+..   ..  ...++.++.+|++| .++++++++.     
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC-HHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999999987655322   11  23578999999999 7777765532     


Q ss_pred             -CCCEEEEcCCCCCCCCCcchhHH---------HHHHHHHHHcC---CCEEEEEccceeccCccCccCChhhhhhhhhHH
Q 022495          135 -DSEAVVCATGFQPGWDLFAPWKA---------INLVEACRKRG---VNRFILISSILVNGAAMGQILNPAYIFLNVFGL  201 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~~~~~~---------~~~l~~~~~~~---~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~  201 (296)
                       ++|++|||||.....+.....+.         +.+++.|++.+   .++||++||...+..            ......
T Consensus        81 G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~------------~~~~~~  148 (254)
T d2gdza1          81 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP------------VAQQPV  148 (254)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC------------CTTCHH
T ss_pred             CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC------------CCCccc
Confidence             49999999998654433222222         77778776653   368999999975432            122567


Q ss_pred             HHHHHHHHHHHHH---------HhCCcEEEEecCcccCCCCCCcee---ecccCc---------cccCCcCHHHHHHHHH
Q 022495          202 TLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGNII---METEDT---------LYEGTISRDQVAEVAV  260 (296)
Q Consensus       202 y~~sK~~~e~~~~---------~~~~~~~~lrp~~i~g~~~~~~~~---~~~~~~---------~~~~~i~~~Dva~~i~  260 (296)
                      |+++|++++.+.+         .+|++++.|.||.+.++.......   ......         ....+..++|+|++++
T Consensus       149 Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  228 (254)
T d2gdza1         149 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999887643         358999999999998753211100   000000         0124678999999999


Q ss_pred             HHhcCCCCCCCeEEEEeCCCCCCCCHH
Q 022495          261 EALLHPESSYKVVEIISRVDAPKRSYE  287 (296)
Q Consensus       261 ~~l~~~~~~~~~~~i~~~~~~~~~~~~  287 (296)
                      .++.++...|+++.+.+   |..+.|+
T Consensus       229 fL~s~~~itG~~i~VdG---G~~~~~~  252 (254)
T d2gdza1         229 TLIEDDALNGAIMKITT---SKGIHFQ  252 (254)
T ss_dssp             HHHHCTTCSSCEEEEET---TTEEEEC
T ss_pred             HHHcCCCCCCCEEEECC---CCeeecc
Confidence            99987766777877766   5555444

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.93  E-value=1.1e-25  Score=190.70  Aligned_cols=203  Identities=18%  Similarity=0.145  Sum_probs=155.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |||||||||||||++|+++|.++|++|++++|..                  +|++| .+.+.+++.+ ++|+|||+|+.
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------~D~~d-~~~~~~~l~~~~~d~vih~a~~   62 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------LDITN-VLAVNKFFNEKKPNVVINCAAH   62 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------CCTTC-HHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------ccCCC-HHHHHHHHHHcCCCEEEeeccc
Confidence            5799999999999999999999999999988753                  48999 8889998875 58999999986


Q ss_pred             CCCCCC----cchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          146 QPGWDL----FAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       146 ~~~~~~----~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      ......    ......     ..+++.++..+ ..+++.||..+|+.....+..+.. +..+...|+.+|...|.++++.
T Consensus        63 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~-~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_          63 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFD-EVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTS-CCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccc-cccchhhhhhhhhHHHHHHHHh
Confidence            442111    001111     55666666655 488889998888877665555433 4567788999999999999999


Q ss_pred             CCcEEEEecCcccCCCCCCce----------eecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCH
Q 022495          217 GINYTIIRPGGLRNEPPTGNI----------IMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSY  286 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~~~----------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~  286 (296)
                      +.+++++||+++||+......          ...........+++++|+++++..+++.+..  .+|++.+   ++.+++
T Consensus       141 ~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~--g~~~~~~---~~~~s~  215 (281)
T d1vl0a_         141 NPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNY--GTFHCTC---KGICSW  215 (281)
T ss_dssp             CSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCC--EEEECCC---BSCEEH
T ss_pred             CCCccccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhccc--CceeEeC---CCccch
Confidence            999999999999998533110          0111123445789999999999999987653  4888888   688999


Q ss_pred             HHHHHHhhc
Q 022495          287 EDLFGSIKQ  295 (296)
Q Consensus       287 ~el~~~i~~  295 (296)
                      .|+++.+.+
T Consensus       216 ~e~~~~i~~  224 (281)
T d1vl0a_         216 YDFAVEIFR  224 (281)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.9e-25  Score=181.19  Aligned_cols=186  Identities=14%  Similarity=0.108  Sum_probs=142.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      .+++||+++||||+++||++++++|+++|++|++.+|+++++++..   .....++.++.+|++| .+.+.++++.    
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988765432   2345689999999999 7777765532    


Q ss_pred             --CCCEEEEcCCCCCCCCCcch-hH---H-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLFAP-WK---A-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~~~-~~---~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|++|||||........+. ..   .             +.+++.|++.+.++||++||...+.            +
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~------------~  149 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV------------S  149 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC------------C
T ss_pred             cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC------------C
Confidence              59999999997654332211 11   1             8889999999888999999997542            2


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------H---hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------K---SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~---~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                      ...+..|+.+|++.+.+.+       .   .|++++.|.||++.++......      ......+.++|+|+.++..+..
T Consensus       150 ~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~------~~~~~~~~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         150 VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS------TSLGPTLEPEEVVNRLMHGILT  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH------HHHCCCCCHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC------ccccCCCCHHHHHHHHHHHHhc
Confidence            3346789999999987664       1   3799999999999887543221      1122457899999999988876


Q ss_pred             C
Q 022495          266 P  266 (296)
Q Consensus       266 ~  266 (296)
                      +
T Consensus       224 ~  224 (244)
T d1yb1a_         224 E  224 (244)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.92  E-value=5.8e-25  Score=184.50  Aligned_cols=200  Identities=20%  Similarity=0.186  Sum_probs=138.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc-hhhhc---c-cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD-KAKTT---L-SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~---~-~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      |++|++|||||+++||+++|+.|+++|++|++.+|+.. ..++.   + .....++.++.+|++| .++++++++.    
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK-GEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS-HHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999753 33221   1 1134578999999999 7777766643    


Q ss_pred             --CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        ++|++|||||........+    .+..             +.+++.|++.+-++||++||.......           
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----------  149 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----------  149 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc-----------
Confidence              5999999999765432211    1111             888999998888899999999754321           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-------ccc--------Cc-cccCCcCH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-------ETE--------DT-LYEGTISR  252 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-------~~~--------~~-~~~~~i~~  252 (296)
                       .....|+.+|++.+.+.+       .+|++++.|.||++.++........       ...        .. ....+..+
T Consensus       150 -~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p  228 (260)
T d1x1ta1         150 -ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP  228 (260)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCH
T ss_pred             -CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCH
Confidence             225679999999998765       3689999999999988754322110       000        00 01236789


Q ss_pred             HHHHHHHHHHhcCCC--CCCCeEEEE
Q 022495          253 DQVAEVAVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~--~~~~~~~i~  276 (296)
                      +|+|++++.++.+..  ..|+++.+-
T Consensus       229 ediA~~v~fL~S~~a~~itG~~i~vD  254 (260)
T d1x1ta1         229 EQLGGTAVFLASDAAAQITGTTVSVD  254 (260)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHhChhhCCCcCCEEEEC
Confidence            999999888775422  344455443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.92  E-value=6e-25  Score=183.30  Aligned_cols=201  Identities=13%  Similarity=0.138  Sum_probs=140.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .|++|++|||||+++||+++|+.|+++|++|++.+|+++..++...  ....++.++.+|++| .++++++++.      
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999999876654321  134579999999999 7766655542      


Q ss_pred             CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCC-EEEEEccceeccCccCccCChhhhhh
Q 022495          135 DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVN-RFILISSILVNGAAMGQILNPAYIFL  196 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~~~~~~~~~~  196 (296)
                      ++|++|||||........    +.+..             +.+++.|++.+.+ +||++||...+...            
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~------------  149 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD------------  149 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC------------
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC------------
Confidence            499999999976543211    11111             7788888888754 89999998654221            


Q ss_pred             hhhHHHHHHHHHHHHHHH---------HhCCcEEEEecCcccCCCCCCc----eeecccCcc-ccCCcCHHHHHHHHHHH
Q 022495          197 NVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGN----IIMETEDTL-YEGTISRDQVAEVAVEA  262 (296)
Q Consensus       197 ~~~~~y~~sK~~~e~~~~---------~~~~~~~~lrp~~i~g~~~~~~----~~~~~~~~~-~~~~i~~~Dva~~i~~~  262 (296)
                      .....|+.+|++++.+.+         ++||+++.|.||.+.++.....    ......... ...+..++|+|++++.+
T Consensus       150 ~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL  229 (251)
T d1zk4a1         150 PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYL  229 (251)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence            124679999999886543         3479999999999987532111    001111111 12367899999998887


Q ss_pred             hcCCC--CCCCeEEEE
Q 022495          263 LLHPE--SSYKVVEII  276 (296)
Q Consensus       263 l~~~~--~~~~~~~i~  276 (296)
                      +.+..  ..|+++.+.
T Consensus       230 ~S~~s~~itG~~i~vD  245 (251)
T d1zk4a1         230 ASNESKFATGSEFVVD  245 (251)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hCchhCCCcCcEEEEC
Confidence            75432  245555553

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.92  E-value=3.4e-25  Score=185.71  Aligned_cols=202  Identities=14%  Similarity=0.142  Sum_probs=141.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hhh---cccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AKT---TLSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +|++|+++||||+++||+++|++|+++|++|++.+|+.+. .++   .+.....++.++++|++| .++++++++.    
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~   82 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKE   82 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999998643 222   222245678999999999 7777665542    


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCC-EEEEEccceeccCccCccCChhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVN-RFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~-~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                        ++|++|||||........    +.+..             +.+++.|++.+.+ +||++||...+...          
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~----------  152 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW----------  152 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC----------
Confidence              599999999976533221    11111             8888888887744 68999998653221          


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----ccCc-cccCCcCHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TEDT-LYEGTISRDQVAEVAVE  261 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~~~-~~~~~i~~~Dva~~i~~  261 (296)
                        ..+..|+.+|++++.+.+       .+||+++.|.||.+.++........+     .... ....+..++|+|++++.
T Consensus       153 --~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~f  230 (261)
T d1geea_         153 --PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAW  230 (261)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             --ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence              225679999999998765       46899999999999886532211000     0001 11236689999999888


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++.+..  ..|+++.+.+
T Consensus       231 L~S~~s~~itG~~i~vDG  248 (261)
T d1geea_         231 LASSEASYVTGITLFADG  248 (261)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhCchhcCCcCCeEEECC
Confidence            775332  3455555543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.92  E-value=2.7e-25  Score=194.70  Aligned_cols=230  Identities=16%  Similarity=0.074  Sum_probs=159.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC-CCCEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv  140 (296)
                      +++|+|||||||||||++|++.|+++|++|++++|...+...++.  ....+++++.+|++| .+.+.++++. .+|+|+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD-QNKLLESIREFQPEIVF   84 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC-HHHHHHHHHHHCCSEEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccC-hHhhhhhhhhchhhhhh
Confidence            568999999999999999999999999999999998765443221  123579999999999 8999888875 589999


Q ss_pred             EcCCCCCCCC----CcchhH-----HHHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHH
Q 022495          141 CATGFQPGWD----LFAPWK-----AINLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAE  210 (296)
Q Consensus       141 ~~ag~~~~~~----~~~~~~-----~~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e  210 (296)
                      |+|+......    ......     ..++++++++.+ ...+++.||...|.........++..+..|...|+.+|...|
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e  164 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  164 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccch
Confidence            9998654211    111111     189999998876 445666665555544443333344445667788999999988


Q ss_pred             HHHH-------------HhCCcEEEEecCcccCCCCCCc--e-------------eecccCccccCCcCHHHHHHHHHHH
Q 022495          211 QYIR-------------KSGINYTIIRPGGLRNEPPTGN--I-------------IMETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       211 ~~~~-------------~~~~~~~~lrp~~i~g~~~~~~--~-------------~~~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                      ..++             ..++.++++||+.+||+.....  +             ...........+++++|+++++..+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~  244 (356)
T d1rkxa_         165 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLL  244 (356)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHH
T ss_pred             hhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhh
Confidence            6653             3578999999999999764221  1             1122223334589999999998888


Q ss_pred             hcCCCCCC----CeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          263 LLHPESSY----KVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       263 l~~~~~~~----~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      +..+...+    ...+. ........++.++++.+.+
T Consensus       245 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~  280 (356)
T d1rkxa_         245 AQKLYTDGAEYAEGWNF-GPNDADATPVKNIVEQMVK  280 (356)
T ss_dssp             HHHHHHTCGGGCSEEEC-CCCGGGCEEHHHHHHHHHH
T ss_pred             hhhhccccccccccccc-ccccccccccchhhhhhHH
Confidence            87543222    22222 2223467888888887754

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.92  E-value=1.6e-24  Score=182.55  Aligned_cols=203  Identities=14%  Similarity=0.103  Sum_probs=145.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      .|++|++|||||+++||+++|+.|+++|++|++.+|+++++++...  .....+.++.+|++| .++++++++.      
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999877654332  134568889999999 7777766542      


Q ss_pred             CCCEEEEcCCCCCCCC----Cc--chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 DSEAVVCATGFQPGWD----LF--APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~----~~--~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      ++|++|||||.....+    ..  +.+..             +.+++.|++.+.+++|++||...+....+         
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~---------  152 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG---------  152 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT---------
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc---------
Confidence            5999999999653221    11  11211             88888898888789999999865432211         


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc---------cCccccCCcCHHHHHHHH
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET---------EDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~---------~~~~~~~~i~~~Dva~~i  259 (296)
                        ....|+++|++.+.+.+       .+||+++.|.||.+.++..........         .......+..++|+|+++
T Consensus       153 --~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v  230 (268)
T d2bgka1         153 --VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAV  230 (268)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHH
T ss_pred             --cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHH
Confidence              12358999999998765       368999999999999876443221100         011122467899999998


Q ss_pred             HHHhcCCC--CCCCeEEEEe
Q 022495          260 VEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~  277 (296)
                      +.++.+..  ..|+++.+-+
T Consensus       231 ~fL~S~~s~~itGq~i~VDG  250 (268)
T d2bgka1         231 AYLAGDESKYVSGLNLVIDG  250 (268)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhChhhCCccCceEEECc
Confidence            88875432  3455555543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.92  E-value=5.6e-25  Score=190.95  Aligned_cols=225  Identities=16%  Similarity=0.146  Sum_probs=157.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc--hhh--hcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEc
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAK--TTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~--~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~  142 (296)
                      |||||||+||||++|+++|+++|++|+++++-..  ...  ..+. ...+++++.+|++| .+.+.+++++ ++|+|||+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~-~~~l~~~~~~~~~d~Vih~   79 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRN-KNDVTRLITKYMPDSCFHL   79 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTC-HHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCC-HHHHHHHHHhcCCceEEee
Confidence            7999999999999999999999999999875321  111  1111 34689999999999 8999999876 57999999


Q ss_pred             CCCCCCCCC----cch--hHH---HHHHHHHHHcCCCEEEEEccceeccCcc-CccCC---------------hhhhhhh
Q 022495          143 TGFQPGWDL----FAP--WKA---INLVEACRKRGVNRFILISSILVNGAAM-GQILN---------------PAYIFLN  197 (296)
Q Consensus       143 ag~~~~~~~----~~~--~~~---~~~l~~~~~~~~~~iV~~SS~~~~~~~~-~~~~~---------------~~~~~~~  197 (296)
                      |+.......    ...  .++   .++++++.+.+++++|+.||..++.... ..+..               ....+..
T Consensus        80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (338)
T d1orra_          80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  159 (338)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             cccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccc
Confidence            986543211    111  111   8999999999987777777765543322 11100               0112345


Q ss_pred             hhHHHHHHHHHHHHHHH----HhCCcEEEEecCcccCCCCCCc-----------------------eeecccCccccCCc
Q 022495          198 VFGLTLIAKLQAEQYIR----KSGINYTIIRPGGLRNEPPTGN-----------------------IIMETEDTLYEGTI  250 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~----~~~~~~~~lrp~~i~g~~~~~~-----------------------~~~~~~~~~~~~~i  250 (296)
                      +...|+.+|...|.++.    .+++....+++..++++...+.                       +...+.......++
T Consensus       160 ~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~  239 (338)
T d1orra_         160 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  239 (338)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             cccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeee
Confidence            67889999999998753    5799999999998886543221                       11122223345689


Q ss_pred             CHHHHHHHHHHHhcCCC-CCCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          251 SRDQVAEVAVEALLHPE-SSYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       251 ~~~Dva~~i~~~l~~~~-~~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                      |++|++++++.++..+. ..++++++.. +.+..+++.|+++.+.+
T Consensus       240 ~v~D~~~~~~~~l~~~~~~~~~~~~i~~-~~~~~~s~~e~~~~i~~  284 (338)
T d1orra_         240 HAEDMISLYFTALANVSKIRGNAFNIGG-TIVNSLSLLELFKLLED  284 (338)
T ss_dssp             EHHHHHHHHHHHHHTHHHHTTCEEEESS-CGGGEEEHHHHHHHHHH
T ss_pred             cccchhhHHHHHHhccccccCccccccc-cccccccHHHHHHHHHH
Confidence            99999999999997643 4667888854 22467899999998864

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.92  E-value=4.7e-25  Score=188.12  Aligned_cols=213  Identities=16%  Similarity=0.218  Sum_probs=159.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc------ccCCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT------LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +.|||||||||||||++++++|+++|++|++++|+.......      ......+++++.+|+.+ .+.+.+.+.+ ++.
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~-~~~   79 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD-HASLVEAVKN-VDV   79 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTC-HHHHHHHHHT-CSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeeccc-chhhhhhhhh-cee
Confidence            368999999999999999999999999999999986543211      01123578999999999 8999999999 999


Q ss_pred             EEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCC
Q 022495          139 VVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGI  218 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~  218 (296)
                      ++|+++....      ....+++++++..+++++++.||...+.....        ...+...+...+...+.++++.++
T Consensus        80 vi~~~~~~~~------~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  145 (307)
T d1qyca_          80 VISTVGSLQI------ESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH--------AVEPAKSVFEVKAKVRRAIEAEGI  145 (307)
T ss_dssp             EEECCCGGGS------GGGHHHHHHHHHHCCCSEEECSCCSSCTTSCC--------CCTTHHHHHHHHHHHHHHHHHHTC
T ss_pred             eeeccccccc------chhhHHHHHHHHhccccceeeecccccccccc--------ccccccccccccccccchhhccCC
Confidence            9999864211      12267889999999889999888754432221        122234466778888889999999


Q ss_pred             cEEEEecCcccCCCCCC------------ceeecccCccccCCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCCCH
Q 022495          219 NYTIIRPGGLRNEPPTG------------NIIMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSY  286 (296)
Q Consensus       219 ~~~~lrp~~i~g~~~~~------------~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~~~  286 (296)
                      +++++||+.++|+....            .............+++++|+|++++.++.++...++.+++.+.  ++.+|+
T Consensus       146 ~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~--~~~~s~  223 (307)
T d1qyca_         146 PYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLP--ANTLSL  223 (307)
T ss_dssp             CBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCG--GGEEEH
T ss_pred             CceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCC--CCccCH
Confidence            99999999999853211            1122233344456999999999999999988776666554332  688999


Q ss_pred             HHHHHHhhc
Q 022495          287 EDLFGSIKQ  295 (296)
Q Consensus       287 ~el~~~i~~  295 (296)
                      .|+++.+.+
T Consensus       224 ~ei~~~~~~  232 (307)
T d1qyca_         224 NELVALWEK  232 (307)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998865

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.92  E-value=5.8e-24  Score=176.05  Aligned_cols=183  Identities=14%  Similarity=0.198  Sum_probs=137.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCe-------EEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFA-------VKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      +.||||||+++||+++++.|+++|++       |++.+|+.+++++..   .....++.++.+|++| .+.++++++.  
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~   80 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHIV   80 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHH
Confidence            35899999999999999999999987       888899987665432   2245678999999999 7776665542  


Q ss_pred             ----CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhh
Q 022495          135 ----DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                          ++|++|||||........    +.+..             +.+++.|++.+-++||++||...+...         
T Consensus        81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------  151 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---------  151 (240)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred             HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC---------
Confidence                599999999975433211    11111             889999998887899999999754322         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                         .....|+.+|++.+.+.+       ++|++++.|.||++.++.....     .......+..++|+|++++.++..+
T Consensus       152 ---~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~-----~~~~~~~~~~PedvA~~v~~l~s~~  223 (240)
T d2bd0a1         152 ---RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-----DDEMQALMMMPEDIAAPVVQAYLQP  223 (240)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-----CSTTGGGSBCHHHHHHHHHHHHTSC
T ss_pred             ---CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc-----CHhhHhcCCCHHHHHHHHHHHHcCC
Confidence               225679999999987764       3689999999999998764321     1122234678999999999998876


Q ss_pred             C
Q 022495          267 E  267 (296)
Q Consensus       267 ~  267 (296)
                      .
T Consensus       224 ~  224 (240)
T d2bd0a1         224 S  224 (240)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=2.8e-24  Score=177.48  Aligned_cols=195  Identities=16%  Similarity=0.197  Sum_probs=141.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |++|++|||||+++||+++++.|+++|++|++.+|+++.+++      .+.+++.+|+++..+.+.+.+++ +|++||||
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~------~~~~~~~~Dv~~~~~~~~~~~g~-iD~lVnnA   74 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR------SGHRYVVCDLRKDLDLLFEKVKE-VDILVLNA   74 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH------TCSEEEECCTTTCHHHHHHHSCC-CSEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh------cCCcEEEcchHHHHHHHHHHhCC-CcEEEecc
Confidence            578999999999999999999999999999999999876654      34577899999855777777887 99999999


Q ss_pred             CCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHH
Q 022495          144 GFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAK  206 (296)
Q Consensus       144 g~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK  206 (296)
                      |........    +.+..             +.+++.|++.+.+++|++||.......            .....|+.+|
T Consensus        75 G~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~------------~~~~~Y~asK  142 (234)
T d1o5ia_          75 GGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI------------ENLYTSNSAR  142 (234)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TTBHHHHHHH
T ss_pred             cccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc------------cccccchhHH
Confidence            975432211    11111             888888888888899999998654322            2245688999


Q ss_pred             HHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee---e-cc-cCccccCCcCHHHHHHHHHHHhcCCC--CCCCe
Q 022495          207 LQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII---M-ET-EDTLYEGTISRDQVAEVAVEALLHPE--SSYKV  272 (296)
Q Consensus       207 ~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~---~-~~-~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~  272 (296)
                      ++.+.+.+       .+||+++.|.||++.++.......   . .. .......+..++|+|++++.++.+..  ..|++
T Consensus       143 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~  222 (234)
T d1o5ia_         143 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQT  222 (234)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcE
Confidence            99987665       368999999999998875322110   0 00 01111236789999999887775322  34555


Q ss_pred             EEEEe
Q 022495          273 VEIIS  277 (296)
Q Consensus       273 ~~i~~  277 (296)
                      +.+.+
T Consensus       223 i~vDG  227 (234)
T d1o5ia_         223 IVVDG  227 (234)
T ss_dssp             EEEST
T ss_pred             EEECc
Confidence            55543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.92  E-value=1.2e-24  Score=181.72  Aligned_cols=201  Identities=14%  Similarity=0.166  Sum_probs=141.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      .|++|+++||||+++||+++++.|+++|++|++.+|++++.++.......+..++++|++| .+.++++++.      ++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS-EADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTC-HHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCC-HHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999999887765544334678899999999 7666655432      49


Q ss_pred             CEEEEcCCCCCCCCC----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||.......    .+.+..             +.+++.|++.+ ++||++||...+..            ....
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~------------~~~~  148 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP------------IEQY  148 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC------------CTTB
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcC------------cccc
Confidence            999999997543221    111211             78888887765 79999999875422            1225


Q ss_pred             HHHHHHHHHHHHHHH-------H--hCCcEEEEecCcccCCCCCC--------ceeecccC-ccccCCcCHHHHHHHHHH
Q 022495          200 GLTLIAKLQAEQYIR-------K--SGINYTIIRPGGLRNEPPTG--------NIIMETED-TLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~--~~~~~~~lrp~~i~g~~~~~--------~~~~~~~~-~~~~~~i~~~Dva~~i~~  261 (296)
                      ..|+.+|++.+.+.+       .  ++|+++.|.||++.++....        ........ .....+..++|+|++++.
T Consensus       149 ~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~f  228 (253)
T d1hxha_         149 AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF  228 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHH
Confidence            679999999887664       2  35999999999998753111        00001111 111235689999999888


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++.+..  ..|+++.+-+
T Consensus       229 L~S~~s~~itG~~i~VDG  246 (253)
T d1hxha_         229 LASDESSVMSGSELHADN  246 (253)
T ss_dssp             HHSGGGTTCCSCEEEESS
T ss_pred             HhChhhCCCcCcEEEECc
Confidence            775322  3555555543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.92  E-value=1.6e-24  Score=181.65  Aligned_cols=200  Identities=12%  Similarity=0.074  Sum_probs=142.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      .+++|+++||||+++||+++++.|+++|++|++.+|+++++++.   +.....++..+.+|++| .++++++++.     
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   80 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            36799999999999999999999999999999999998766543   23345678999999999 7776665543     


Q ss_pred             -CCCEEEEcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 -DSEAVVCATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                       ++|++|||||........     +.+..             +.+++.|++.+.++||++||...+...           
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~-----------  149 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------  149 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC-----------
Confidence             599999999975432211     11211             788888888877899999998754322           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc------------eeecc-------cCcc-ccC
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN------------IIMET-------EDTL-YEG  248 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~------------~~~~~-------~~~~-~~~  248 (296)
                       .....|+.+|++++.+.+       .+||+++.|.||.|.++.....            .....       .... ...
T Consensus       150 -~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R  228 (260)
T d1zema1         150 -PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRR  228 (260)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSS
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCC
Confidence             225679999999998775       3689999999999988631110            00000       0001 123


Q ss_pred             CcCHHHHHHHHHHHhcCCC--CCCCeEEE
Q 022495          249 TISRDQVAEVAVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       249 ~i~~~Dva~~i~~~l~~~~--~~~~~~~i  275 (296)
                      +..++|+|.+++.++.+..  ..|+++.+
T Consensus       229 ~g~pedvA~~v~fL~S~~s~~itG~~i~V  257 (260)
T d1zema1         229 YGDINEIPGVVAFLLGDDSSFMTGVNLPI  257 (260)
T ss_dssp             CBCGGGSHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCCeEEe
Confidence            5689999999887775422  24444444

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.91  E-value=2.6e-24  Score=180.88  Aligned_cols=200  Identities=20%  Similarity=0.142  Sum_probs=133.7

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc------CCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS------KDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++|++|||||+++||+++|++|+++|++|++.+|+.+++++...      ....++.++.+|++| .+.++++++.   
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~   81 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG   81 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC-HHHHHHHHHHHHH
Confidence            679999999999999999999999999999999999877654321      123468999999999 7777665542   


Q ss_pred             ---CCCEEEEcCCCCCCCC--------CcchhHH-------------HHHHHHHHHcCCCEEEEEccce-eccCccCccC
Q 022495          135 ---DSEAVVCATGFQPGWD--------LFAPWKA-------------INLVEACRKRGVNRFILISSIL-VNGAAMGQIL  189 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~--------~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~-~~~~~~~~~~  189 (296)
                         ++|++|||||......        ..+.+..             +.+++.+++.+ +++|+++|.. .+..      
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~------  154 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA------  154 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC------
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecccccc------
Confidence               5999999999642110        1112221             78888887775 4666666653 2211      


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccC------------c-cccCC
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETED------------T-LYEGT  249 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~------------~-~~~~~  249 (296)
                            ......|+.+|++.+.+.+       .+|++++.|.||.+.++............            . ....+
T Consensus       155 ------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~  228 (264)
T d1spxa_         155 ------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVM  228 (264)
T ss_dssp             ------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSC
T ss_pred             ------CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCC
Confidence                  1124669999999998765       36999999999999887543221110000            0 01236


Q ss_pred             cCHHHHHHHHHHHhcCCC---CCCCeEEEEe
Q 022495          250 ISRDQVAEVAVEALLHPE---SSYKVVEIIS  277 (296)
Q Consensus       250 i~~~Dva~~i~~~l~~~~---~~~~~~~i~~  277 (296)
                      ..++|+|++++.++.++.   ..|+++.+-+
T Consensus       229 g~pedvA~~v~fL~S~~~s~~itG~~i~vDG  259 (264)
T d1spxa_         229 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDG  259 (264)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence            789999999988886442   3555555543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.91  E-value=2.7e-24  Score=181.86  Aligned_cols=201  Identities=11%  Similarity=0.072  Sum_probs=141.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      .|++|++|||||+++||+++|+.|+++|++|++.+|+++++.+.......++..+.+|++| .+.+++++..      ++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRS-LEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEeccccc-HHHHHHHHHHHHHHhCCc
Confidence            4689999999999999999999999999999999999888776554344679999999999 7766665432      49


Q ss_pred             CEEEEcCCCCCCCCC-----cc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhh
Q 022495          137 EAVVCATGFQPGWDL-----FA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       137 d~vv~~ag~~~~~~~-----~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                      |++|||||+......     .+    .+..             +.+++.|++.+ +++|+++|...+...          
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~----------  149 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN----------  149 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT----------
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC----------
Confidence            999999996432111     11    1111             78888888776 689999987643221          


Q ss_pred             hhhhhHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCCCceee--------cc-----cCcc-ccCCcCHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIRK------SGINYTIIRPGGLRNEPPTGNIIM--------ET-----EDTL-YEGTISRDQ  254 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~~------~~~~~~~lrp~~i~g~~~~~~~~~--------~~-----~~~~-~~~~i~~~D  254 (296)
                        .....|+.+|++.+.+.+.      .+++++.|.||.|.++........        ..     .... ...+..++|
T Consensus       150 --~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pee  227 (276)
T d1bdba_         150 --GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEE  227 (276)
T ss_dssp             --SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGG
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHH
Confidence              1245699999999877652      359999999999988753221100        00     0011 122567999


Q ss_pred             HHHHHHHHhcCC---CCCCCeEEEEe
Q 022495          255 VAEVAVEALLHP---ESSYKVVEIIS  277 (296)
Q Consensus       255 va~~i~~~l~~~---~~~~~~~~i~~  277 (296)
                      +|.+++.++..+   ...|+++.+-+
T Consensus       228 va~~v~fL~S~~~a~~itG~~i~VDG  253 (276)
T d1bdba_         228 YTGAYVFFATRGDAAPATGALLNYDG  253 (276)
T ss_dssp             GSHHHHHHHCHHHHTTCSSCEEEESS
T ss_pred             HHHHHHHHcCCcccCCeeCcEEEECc
Confidence            999988877533   24566666644

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.91  E-value=2.4e-24  Score=178.86  Aligned_cols=198  Identities=18%  Similarity=0.149  Sum_probs=138.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc-Ccchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR-DLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      +.||||||+++||+++|++|+++|++|++.++ +++..++.   +.....++.++++|++| .+.++++++.      ++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcCCC
Confidence            48999999999999999999999999998765 44333322   22234678899999999 7777665542      59


Q ss_pred             CEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          137 EAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      |++|||||........    +.+..             +.+++.|++.+-++||++||...+..            ....
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~------------~~~~  148 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG------------NIGQ  148 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC------------CTTC
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC------------CCCC
Confidence            9999999976543221    11211             88899998888789999999875422            1225


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc---eeec-ccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN---IIME-TEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~---~~~~-~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      ..|+.+|++.+.+.+       ++|++++.|.||++.++.....   .... ........+..++|+|++++.+..++..
T Consensus       149 ~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a  228 (244)
T d1edoa_         149 ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGG
T ss_pred             HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchh
Confidence            679999999998765       3699999999999987642211   0000 0011112367899999998887555543


Q ss_pred             ---CCCeEEEEe
Q 022495          269 ---SYKVVEIIS  277 (296)
Q Consensus       269 ---~~~~~~i~~  277 (296)
                         .|+++.+.+
T Consensus       229 ~~itG~~i~vdG  240 (244)
T d1edoa_         229 SYITGQAFTIDG  240 (244)
T ss_dssp             GGCCSCEEEEST
T ss_pred             cCCcCCeEEeCC
Confidence               445555433

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.91  E-value=7.4e-24  Score=185.28  Aligned_cols=212  Identities=16%  Similarity=0.141  Sum_probs=153.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      .|+|+|||||||||++|+++|+++|++|+++.|++++..........+++++++|+.|+.+.+..++++ +|+++++...
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~-~~~~~~~~~~   81 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEG-AHLAFINTTS   81 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTT-CSEEEECCCS
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcC-CceEEeeccc
Confidence            689999999999999999999999999999999987654221113468999999999844557788998 9999887643


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEec
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRP  225 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp  225 (296)
                      ...   .......++++++++.|++++|+.||...........          ...|..+|...+.++++.+++++++||
T Consensus        82 ~~~---~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~----------~~~~~~~k~~~~~~~~~~~~~~~~vr~  148 (350)
T d1xgka_          82 QAG---DEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWP----------AVPMWAPKFTVENYVRQLGLPSTFVYA  148 (350)
T ss_dssp             TTS---CHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCC----------CCTTTHHHHHHHHHHHTSSSCEEEEEE
T ss_pred             ccc---hhhhhhhHHHHHHHHhCCCceEEEeeccccccCCccc----------chhhhhhHHHHHHHHHhhccCceeeee
Confidence            221   1222338999999999988888888875433221111          122457899999999999999999999


Q ss_pred             CcccCCCCCCc-------------e--eecccCccccCCcCH-HHHHHHHHHHhcCCC--CCCCeEEEEeCCCCCCCCHH
Q 022495          226 GGLRNEPPTGN-------------I--IMETEDTLYEGTISR-DQVAEVAVEALLHPE--SSYKVVEIISRVDAPKRSYE  287 (296)
Q Consensus       226 ~~i~g~~~~~~-------------~--~~~~~~~~~~~~i~~-~Dva~~i~~~l~~~~--~~~~~~~i~~~~~~~~~~~~  287 (296)
                      +.+++......             .  ..+........+++. +|+++++..++.++.  ..++.|++.+    +.+|+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g----~~~T~~  224 (350)
T d1xgka_         149 GIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF----ETLSPV  224 (350)
T ss_dssp             CEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS----EEECHH
T ss_pred             ceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC----CcCCHH
Confidence            98876431111             0  111112223345665 799999999987542  4678888876    569999


Q ss_pred             HHHHHhhc
Q 022495          288 DLFGSIKQ  295 (296)
Q Consensus       288 el~~~i~~  295 (296)
                      |+++.|++
T Consensus       225 eia~~l~~  232 (350)
T d1xgka_         225 QVCAAFSR  232 (350)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999875

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=3.8e-24  Score=174.13  Aligned_cols=178  Identities=19%  Similarity=0.214  Sum_probs=123.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      .|+|||||||||||++|+++|+++|+  +|+++.|++..       ..+.+   ..+..| ...+...+...+|+||||+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~---~~~~~d-~~~~~~~~~~~~d~vi~~~   70 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRL---DNPVGP-LAELLPQLDGSIDTAFCCL   70 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTE---ECCBSC-HHHHGGGCCSCCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccc---cccccc-hhhhhhccccchheeeeee
Confidence            37999999999999999999999997  56766766432       12333   334444 3334443333499999999


Q ss_pred             CCCCCC--CCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          144 GFQPGW--DLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       144 g~~~~~--~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      |.....  ........     .+++++|++.+++++|++||..+++..              .+.|..+|..+|+.+++.
T Consensus        71 g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~--------------~~~y~~~K~~~E~~l~~~  136 (212)
T d2a35a1          71 GTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS--------------SIFYNRVKGELEQALQEQ  136 (212)
T ss_dssp             CCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC--------------SSHHHHHHHHHHHHHTTS
T ss_pred             eeeccccccccccccchhhhhhhccccccccccccccccccccccccc--------------ccchhHHHHHHhhhcccc
Confidence            865321  11111111     899999999999999999998776432              245889999999999888


Q ss_pred             CC-cEEEEecCcccCCCCCCcee---ecccCccc---cCCcCHHHHHHHHHHHhcCCCC
Q 022495          217 GI-NYTIIRPGGLRNEPPTGNII---METEDTLY---EGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       217 ~~-~~~~lrp~~i~g~~~~~~~~---~~~~~~~~---~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      ++ +++++||+.+||+.......   ........   ..+|+++|+|++++.++.++..
T Consensus       137 ~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         137 GWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             CCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             ccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence            87 49999999999976432211   11111111   1358999999999999987653

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.91  E-value=3.7e-24  Score=180.83  Aligned_cols=201  Identities=15%  Similarity=0.123  Sum_probs=140.5

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc------CCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS------KDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++|+++||||+++||+++|+.|+++|++|++.+|+++++++...      ....++.++.+|++| .+.++++++.   
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC-HHHHHHHHHHHHH
Confidence            579999999999999999999999999999999999876654321      123468999999999 7776665532   


Q ss_pred             ---CCCEEEEcCCCCCCCC------CcchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChh
Q 022495          135 ---DSEAVVCATGFQPGWD------LFAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~------~~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                         ++|++|||||......      ..+.+..             +.+++.|++.+.++++++||...+...        
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~--------  152 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH--------  152 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC--------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC--------
Confidence               4999999999643211      1111221             788888888877788888887543221        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee------------ecccCccc-cCCcCH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII------------METEDTLY-EGTISR  252 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~------------~~~~~~~~-~~~i~~  252 (296)
                          ..+..|+.+|.+.+.+.+       .+||+++.|.||.+.++.......            ........ ..+..+
T Consensus       153 ----~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~p  228 (274)
T d1xhla_         153 ----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKP  228 (274)
T ss_dssp             ----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCH
T ss_pred             ----CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCH
Confidence                124679999999998765       369999999999998863211100            00011111 235689


Q ss_pred             HHHHHHHHHHhcCCC---CCCCeEEEEe
Q 022495          253 DQVAEVAVEALLHPE---SSYKVVEIIS  277 (296)
Q Consensus       253 ~Dva~~i~~~l~~~~---~~~~~~~i~~  277 (296)
                      +|+|++++.++..+.   ..|+++.+-+
T Consensus       229 ediA~~v~fL~S~d~s~~itG~~i~vDG  256 (274)
T d1xhla_         229 EEIANIIVFLADRNLSSYIIGQSIVADG  256 (274)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             HHHHHHHHHHcCCccccCccCcEEEeCc
Confidence            999999888775332   3555665544

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.91  E-value=2e-23  Score=174.50  Aligned_cols=198  Identities=19%  Similarity=0.142  Sum_probs=137.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      |.+|||||+++||+++|+.|+++|++|++.+|+++++++..   .....++.++++|++| .+++.++++.      ++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhCCcc
Confidence            56799999999999999999999999999999987765432   2245678999999999 7777665532      599


Q ss_pred             EEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC-CCEEEEEccceeccCccCccCChhhhhhhhh
Q 022495          138 AVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG-VNRFILISSILVNGAAMGQILNPAYIFLNVF  199 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~  199 (296)
                      ++|||||+.......    +.+..             +.+++.+.+.+ .++||++||...+...            ...
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------------~~~  148 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------PEL  148 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------TTB
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC------------ccc
Confidence            999999975532211    11211             67777766665 4689999998654322            225


Q ss_pred             HHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--------------eecccCc-cccCCcCHHHHHH
Q 022495          200 GLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--------------IMETEDT-LYEGTISRDQVAE  257 (296)
Q Consensus       200 ~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--------------~~~~~~~-~~~~~i~~~Dva~  257 (296)
                      ..|+.+|++.+.+.+       .+|++++.|.||.+.++......              ....... ....+..++|+|+
T Consensus       149 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~  228 (255)
T d1gega_         149 AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAA  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             ccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHH
Confidence            679999999998765       46999999999999875321100              0000001 1123678999999


Q ss_pred             HHHHHhcCCC--CCCCeEEEEe
Q 022495          258 VAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       258 ~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +++.++.+..  ..|+++.+.+
T Consensus       229 ~v~fL~S~~a~~itG~~i~vDG  250 (255)
T d1gega_         229 CVSYLASPDSDYMTGQSLLIDG  250 (255)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHhCchhCCccCcEEEecC
Confidence            9887775322  2445555543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3e-23  Score=173.46  Aligned_cols=201  Identities=16%  Similarity=0.217  Sum_probs=138.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---C--CCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K--DNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+++|++|||||+++||+++|+.|+++|++|++.+|++++.++...   .  ...++.++++|++| +++++++++.   
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~v~~~~~   85 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRS   85 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC-HHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999877654321   1  23468899999999 7766655432   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcC--CCEEEEEccceeccCccCccCChh
Q 022495          135 ---DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRG--VNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                         ++|++|||||........    +.+..             +.+++.+++.+  -++||++||.+.+...        
T Consensus        86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~--------  157 (257)
T d1xg5a_          86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL--------  157 (257)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC--------
T ss_pred             hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC--------
Confidence               499999999975432221    11111             66777777755  4799999998754221        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH---------HhCCcEEEEecCcccCCCCCCc----eeecccCccccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGN----IIMETEDTLYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~---------~~~~~~~~lrp~~i~g~~~~~~----~~~~~~~~~~~~~i~~~Dva~~i  259 (296)
                        |......|+.+|.+++.+.+         .++++++.|.||.+.++.....    ............+..++|+|+++
T Consensus       158 --p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  235 (257)
T d1xg5a_         158 --PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAV  235 (257)
T ss_dssp             --SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHH
T ss_pred             --CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHH
Confidence              11235669999999987653         2589999999998877531110    00000001113478999999999


Q ss_pred             HHHhcCCCCCCCeEEE
Q 022495          260 VEALLHPESSYKVVEI  275 (296)
Q Consensus       260 ~~~l~~~~~~~~~~~i  275 (296)
                      +.++..+. .+.+.++
T Consensus       236 ~fL~s~~a-~~itG~i  250 (257)
T d1xg5a_         236 IYVLSTPA-HIQIGDI  250 (257)
T ss_dssp             HHHHHSCT-TEEEEEE
T ss_pred             HHHhCChh-cCeECCE
Confidence            98886654 3445443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.5e-23  Score=176.46  Aligned_cols=200  Identities=16%  Similarity=0.139  Sum_probs=140.0

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc--------cCCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL--------SKDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      .|++|++|||||+++||+++|+.|+++|++|++.+|+.+++.+..        .....++..+.+|++| .+.+.++++.
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~   87 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKS   87 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC-HHHHHHHHHH
Confidence            478999999999999999999999999999999999987654321        1134578999999999 7777665542


Q ss_pred             ------CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          135 ------DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 ------~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                            ++|++|||||........+    .+..             +.+++.|++.+.+++|++||....+         
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~---------  158 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG---------  158 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC---------
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc---------
Confidence                  4999999999754332211    1111             7777888877777899887653211         


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec------c-cCcc-ccCCcCHHHHH
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME------T-EDTL-YEGTISRDQVA  256 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~------~-~~~~-~~~~i~~~Dva  256 (296)
                          ......|+.+|++++.+.+       .+||+++.|.||.|.++.........      . .... ...+..++|+|
T Consensus       159 ----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA  234 (297)
T d1yxma1         159 ----FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS  234 (297)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHH
T ss_pred             ----ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHH
Confidence                1124668999999998775       36899999999999886532221100      0 0011 12356899999


Q ss_pred             HHHHHHhcCC--CCCCCeEEEE
Q 022495          257 EVAVEALLHP--ESSYKVVEII  276 (296)
Q Consensus       257 ~~i~~~l~~~--~~~~~~~~i~  276 (296)
                      .+++.++.+.  ...|+++.+.
T Consensus       235 ~~v~fL~Sd~s~~iTG~~i~VD  256 (297)
T d1yxma1         235 SVVCFLLSPAASFITGQSVDVD  256 (297)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHhCchhcCcCCcEEEeC
Confidence            9988887532  2355566554

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.90  E-value=9.5e-24  Score=178.15  Aligned_cols=201  Identities=16%  Similarity=0.142  Sum_probs=136.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc---C---CCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS---K---DNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~---~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      .+++|++|||||+++||+++|+.|+++|++|++.+|+++++++...   .   ...++.++.+|++| .++++++++.  
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~   80 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTL   80 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC-HHHHHHHHHHHH
Confidence            3679999999999999999999999999999999999876654321   1   23468999999999 7777665542  


Q ss_pred             ----CCCEEEEcCCCCCCCCC----cc----hhHH-------------HHHHHHHHHcCCCEEEEEcc-ceeccCccCcc
Q 022495          135 ----DSEAVVCATGFQPGWDL----FA----PWKA-------------INLVEACRKRGVNRFILISS-ILVNGAAMGQI  188 (296)
Q Consensus       135 ----~~d~vv~~ag~~~~~~~----~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS-~~~~~~~~~~~  188 (296)
                          ++|++|||||.......    .+    .+..             +.+++.|++.+- .+|+++| .+....     
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-~iI~~~Ss~a~~~~-----  154 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG-EIVNVSSIVAGPQA-----  154 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCGGGSSSC-----
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC-ccccccchhccccC-----
Confidence                49999999997542211    01    1211             777888877653 5555555 432221     


Q ss_pred             CChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee------------ecccCcc-ccC
Q 022495          189 LNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII------------METEDTL-YEG  248 (296)
Q Consensus       189 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~------------~~~~~~~-~~~  248 (296)
                             ......|+.+|++.+.+.+       .+||+++.|.||+|.++.......            ....... ...
T Consensus       155 -------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR  227 (272)
T d1xkqa_         155 -------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGA  227 (272)
T ss_dssp             -------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS
T ss_pred             -------CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCC
Confidence                   1124679999999997765       368999999999998864211100            0001111 123


Q ss_pred             CcCHHHHHHHHHHHhcCC---CCCCCeEEEEe
Q 022495          249 TISRDQVAEVAVEALLHP---ESSYKVVEIIS  277 (296)
Q Consensus       249 ~i~~~Dva~~i~~~l~~~---~~~~~~~~i~~  277 (296)
                      +..++|+|++++.++..+   ...|+++.+.+
T Consensus       228 ~g~pediA~~v~fL~S~~as~~iTG~~i~vDG  259 (272)
T d1xkqa_         228 AGKPEHIANIILFLADRNLSFYILGQSIVADG  259 (272)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCcchhCCccCeEEEeCc
Confidence            678999999988877533   23566666644

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.90  E-value=7.5e-24  Score=177.38  Aligned_cols=199  Identities=17%  Similarity=0.182  Sum_probs=137.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      +|++|||||+++||+++|+.|+++|++|++.+|+++++++..   .....++.++++|++| .++++++++.      ++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999987665432   2245679999999999 7777665543      59


Q ss_pred             CEEEEcCCCCCCCCCcc----hhHH-------------HHHHHH--HHHcCCCEEEEEccceeccCccCccCChhhhhhh
Q 022495          137 EAVVCATGFQPGWDLFA----PWKA-------------INLVEA--CRKRGVNRFILISSILVNGAAMGQILNPAYIFLN  197 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~--~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~  197 (296)
                      |++|||||+.......+    .+..             +.+++.  +++.+.++||++||...+...            .
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~------------~  148 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV------------V  148 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC------------T
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc------------c
Confidence            99999999765432211    1111             555553  445566799999998654322            1


Q ss_pred             hhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCce--------------eecccCccc-cCCcCHHHH
Q 022495          198 VFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNI--------------IMETEDTLY-EGTISRDQV  255 (296)
Q Consensus       198 ~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~--------------~~~~~~~~~-~~~i~~~Dv  255 (296)
                      ....|+.+|++++.+.+       ++||+++.|.||++.++......              .-....... ..+..++|+
T Consensus       149 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedi  228 (257)
T d2rhca1         149 HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV  228 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHH
Confidence            25679999999998775       35899999999999875321100              000001111 236789999


Q ss_pred             HHHHHHHhcCCC--CCCCeEEEEe
Q 022495          256 AEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       256 a~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      |++++.++.+..  ..|+++.+-+
T Consensus       229 a~~v~fL~S~~s~~itG~~i~vDG  252 (257)
T d2rhca1         229 AEMVAYLIGPGAAAVTAQALNVCG  252 (257)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhcCCcCceEEECc
Confidence            999887774322  3455555543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.90  E-value=3.3e-23  Score=172.86  Aligned_cols=202  Identities=13%  Similarity=0.114  Sum_probs=139.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----cCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      ++++|+||||||+++||+++|++|+++|++|+++.|+.++..+..    .....++.++.+|++++.+.++++++.    
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999988876543221    123457899999998424444443321    


Q ss_pred             --CCCEEEEcCCCCCCCCCcchhHH---------HHHHHHHHHcC---CCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          135 --DSEAVVCATGFQPGWDLFAPWKA---------INLVEACRKRG---VNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~~~~~~---------~~~l~~~~~~~---~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                        ++|++|||||............+         +.+++.|.+.+   .++||++||...+...            ..+.
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~------------~~~~  149 (254)
T d1sbya1          82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------------HQVP  149 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------TTSH
T ss_pred             cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC------------CCCH
Confidence              49999999997543322222222         77788886642   4689999998764322            2256


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc---eeeccc---CccccCCcCHHHHHHHHHHHhcCCC
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN---IIMETE---DTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~---~~~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      .|+++|++...+.+       .++++++.|.||++.++.....   ......   ........+++++|++++.++....
T Consensus       150 ~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~~  229 (254)
T d1sbya1         150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCCC
Confidence            79999999987664       4699999999999988631111   000000   0111235678999999998887654


Q ss_pred             CCCCeEEEEe
Q 022495          268 SSYKVVEIIS  277 (296)
Q Consensus       268 ~~~~~~~i~~  277 (296)
                       .|.++.+.+
T Consensus       230 -tG~vi~vdg  238 (254)
T d1sbya1         230 -NGAIWKLDL  238 (254)
T ss_dssp             -TTCEEEEET
T ss_pred             -CCCEEEECC
Confidence             676776654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.90  E-value=1.8e-23  Score=173.19  Aligned_cols=198  Identities=16%  Similarity=0.158  Sum_probs=136.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CCC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DSE  137 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~d  137 (296)
                      +++|+++||||+++||+++|+.|+++|++|++.+|+.++..+.....+.++.++++|++| .+.+++.++.      ++|
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD-PKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCC-HHHHHHHHHHHHHHhCCcc
Confidence            679999999999999999999999999999999999988877666566789999999999 7777665542      499


Q ss_pred             EEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          138 AVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      ++|||||........    +.+..             +.+++.+++  .+.++++||.+..             +...+.
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~a~~-------------~~~~~~  146 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVAGL-------------GAFGLA  146 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCCTTC-------------CHHHHH
T ss_pred             Eeccccccccccchhhhhcccccccccccccccccccccccccccc--ccceeeccccccc-------------cccCcc
Confidence            999999865432211    11111             334443332  2456666665321             122366


Q ss_pred             HHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee----ecccCccccCCcCHHHHHHHHHHHhcCCC--
Q 022495          201 LTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII----METEDTLYEGTISRDQVAEVAVEALLHPE--  267 (296)
Q Consensus       201 ~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~----~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--  267 (296)
                      .|+.+|++.+.+.+       .+|+++++|.||.+.++...+...    ..........+..++|+|++++.++.+..  
T Consensus       147 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~  226 (241)
T d2a4ka1         147 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAY  226 (241)
T ss_dssp             HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             ccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCC
Confidence            79999999998775       358999999999998865332110    00001111346789999999888885432  


Q ss_pred             CCCCeEEEEe
Q 022495          268 SSYKVVEIIS  277 (296)
Q Consensus       268 ~~~~~~~i~~  277 (296)
                      ..|+++.+-+
T Consensus       227 itG~~i~vDG  236 (241)
T d2a4ka1         227 ITGQALYVDG  236 (241)
T ss_dssp             CCSCEEEEST
T ss_pred             CcCceEEeCC
Confidence            3445555443

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.7e-23  Score=173.80  Aligned_cols=200  Identities=15%  Similarity=0.122  Sum_probs=142.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--CCCEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--DSEAVVC  141 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--~~d~vv~  141 (296)
                      +++|++|||||+++||+++++.|+++|++|++.+|+++++++..  ...++....+|+.+ .+.++..+..  ++|++||
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~--~~~~~~~~~~d~~~-~~~~~~~~~~~~~id~lVn   80 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE--KYPGIQTRVLDVTK-KKQIDQFANEVERLDVLFN   80 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG--GSTTEEEEECCTTC-HHHHHHHHHHCSCCSEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--hccCCceeeeeccc-cccccccccccccceeEEe
Confidence            68999999999999999999999999999999999998877655  34568888999988 6655544332  4999999


Q ss_pred             cCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHH
Q 022495          142 ATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLI  204 (296)
Q Consensus       142 ~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~  204 (296)
                      |||.....+..+    .+..             +.+++.+.+.+.++||++||....-           .+...+..|+.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~-----------~~~~~~~~Y~~  149 (245)
T d2ag5a1          81 VAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV-----------KGVVNRCVYST  149 (245)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT-----------BCCTTBHHHHH
T ss_pred             cccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc-----------CCccchhHHHH
Confidence            999766433221    1111             7778888888878999999875310           11234677999


Q ss_pred             HHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec---------c-cCccccCCcCHHHHHHHHHHHhcCCC
Q 022495          205 AKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME---------T-EDTLYEGTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       205 sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~---------~-~~~~~~~~i~~~Dva~~i~~~l~~~~  267 (296)
                      +|++.+.+.+       .+||+++.|.||.+.++.........         . .......+..++|+|+++..++.+..
T Consensus       150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s  229 (245)
T d2ag5a1         150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDES  229 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence            9999998775       36899999999999875422110000         0 00111236788999999888776432


Q ss_pred             --CCCCeEEEEe
Q 022495          268 --SSYKVVEIIS  277 (296)
Q Consensus       268 --~~~~~~~i~~  277 (296)
                        ..|+++.+.+
T Consensus       230 ~~iTG~~i~VDG  241 (245)
T d2ag5a1         230 AYVTGNPVIIDG  241 (245)
T ss_dssp             TTCCSCEEEECT
T ss_pred             CCCcCceEEeCC
Confidence              3455555543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.89  E-value=4.2e-23  Score=173.04  Aligned_cols=210  Identities=12%  Similarity=0.073  Sum_probs=140.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----cCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      +++++|++|||||+++||+++|+.|+++|++|++.+|+.++..+..    .....++.++.+|++| .++++++++.   
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDA   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999987654322    1134678999999999 7777666542   


Q ss_pred             ---CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHc-CCCEEEEEccceeccCccCccCChhh
Q 022495          135 ---DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKR-GVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                         ++|++|||||........    +.+..             +.+++.|.+. +.++++.++|...+......     .
T Consensus        84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~-----~  158 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-----L  158 (260)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-----T
T ss_pred             HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc-----c
Confidence               599999999975433211    11111             6677777554 45577777776543221110     0


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCcee--e-cccCc-cccCCcCHHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNII--M-ETEDT-LYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~--~-~~~~~-~~~~~i~~~Dva~~i~~~  262 (296)
                      .+......|+.+|++.+.+.+       ++|++++.|.||.+.++.......  . ..... ....+..++|+|++++.+
T Consensus       159 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL  238 (260)
T d1h5qa_         159 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILL  238 (260)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHH
T ss_pred             ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            011234679999999998765       468999999999998864322110  0 00001 112367899999998887


Q ss_pred             hcCCC--CCCCeEEEEe
Q 022495          263 LLHPE--SSYKVVEIIS  277 (296)
Q Consensus       263 l~~~~--~~~~~~~i~~  277 (296)
                      +.+..  ..|+++.+-+
T Consensus       239 ~S~~s~~itG~~i~VDG  255 (260)
T d1h5qa_         239 LSDHATYMTGGEYFIDG  255 (260)
T ss_dssp             HSGGGTTCCSCEEEECT
T ss_pred             hcchhCCCcCceEEECC
Confidence            75332  3455555533

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.89  E-value=1.1e-23  Score=179.31  Aligned_cols=208  Identities=12%  Similarity=0.101  Sum_probs=148.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~  145 (296)
                      |+|||||||||||++|++.|.++|+.| ++++....              +.+|++| .+.+.+++++ ++|+|||+||.
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~--------------~~~Dl~~-~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE--------------FCGDFSN-PKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS--------------SCCCTTC-HHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc--------------ccCcCCC-HHHHHHHHHHcCCCEEEEeccc
Confidence            679999999999999999999998644 44544321              2379999 8999998876 58999999986


Q ss_pred             CCC----CCCcchhHH-----HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 022495          146 QPG----WDLFAPWKA-----INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKS  216 (296)
Q Consensus       146 ~~~----~~~~~~~~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  216 (296)
                      ...    .........     .++++++++.++ +++++||..+|+.....+..|. .+..|.+.|+.+|..+|.++++.
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~-~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          65 TAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQET-DATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTT-SCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccc-cccCCCchHhhhhhhhhhhHHhh
Confidence            532    111111111     888898888875 7999999988877666555554 34567889999999999999888


Q ss_pred             CCcEEEEecCcccCCCCCCce-----------eecccCccccCCcCHHHHHHHHHHHhc---CCCCCCCeEEEEeCCCCC
Q 022495          217 GINYTIIRPGGLRNEPPTGNI-----------IMETEDTLYEGTISRDQVAEVAVEALL---HPESSYKVVEIISRVDAP  282 (296)
Q Consensus       217 ~~~~~~lrp~~i~g~~~~~~~-----------~~~~~~~~~~~~i~~~Dva~~i~~~l~---~~~~~~~~~~i~~~~~~~  282 (296)
                      .....++|++.++........           ........+..+++.+|+++++..++.   .....+.+||+++   +.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~---~~  219 (298)
T d1n2sa_         143 CPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVA---GG  219 (298)
T ss_dssp             CSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCC---BS
T ss_pred             hcccccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccccC---CC
Confidence            778888887766644322211           111122334567899999998877765   2333456888887   68


Q ss_pred             CCCHHHHHHHhhc
Q 022495          283 KRSYEDLFGSIKQ  295 (296)
Q Consensus       283 ~~~~~el~~~i~~  295 (296)
                      ..++.|+++.+.+
T Consensus       220 ~~~~~~~~~~i~~  232 (298)
T d1n2sa_         220 TTTWHDYAALVFD  232 (298)
T ss_dssp             CEEHHHHHHHHHH
T ss_pred             ceecHHHHHHHHh
Confidence            8999999887653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=4.5e-23  Score=176.10  Aligned_cols=195  Identities=14%  Similarity=0.075  Sum_probs=133.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh---------hhcccCCCCCeEEEEcccCCChHHHHHHh
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA---------KTTLSKDNPSLQIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~~~~~D~~d~~~~~~~~~  132 (296)
                      +.+++|++|||||+++||+++|+.|+++|++|++.+|+.+..         .+...........+.+|+.| .+.+++.+
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v   81 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLV   81 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch-HHHHHHHH
Confidence            567899999999999999999999999999999998765422         11111111234566778888 55544433


Q ss_pred             cC------CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccC
Q 022495          133 GD------DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQIL  189 (296)
Q Consensus       133 ~~------~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~  189 (296)
                      +.      ++|++|||||+.......+    .+..             +.+++.|++.+-++||++||...+...     
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~-----  156 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN-----  156 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC-----
Confidence            21      4999999999865432211    1111             888999998888899999998753221     


Q ss_pred             ChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHH
Q 022495          190 NPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEA  262 (296)
Q Consensus       190 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~  262 (296)
                             .....|+++|++++.+.+       ++||+++.|.||.+.+.....      ........+.++|+|.+++.+
T Consensus       157 -------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~------~~~~~~~~~~PedvA~~v~fL  223 (302)
T d1gz6a_         157 -------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV------MPEDLVEALKPEYVAPLVLWL  223 (302)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG------SCHHHHHHSCGGGTHHHHHHH
T ss_pred             -------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc------CcHhhHhcCCHHHHHHHHHHH
Confidence                   225679999999998765       469999999999875532111      011112356789999998887


Q ss_pred             hcCCC-CCCCeEEE
Q 022495          263 LLHPE-SSYKVVEI  275 (296)
Q Consensus       263 l~~~~-~~~~~~~i  275 (296)
                      +.... ..|+++.+
T Consensus       224 ~S~~a~itG~~i~v  237 (302)
T d1gz6a_         224 CHESCEENGGLFEV  237 (302)
T ss_dssp             TSTTCCCCSCEEEE
T ss_pred             cCCCcCCCCcEEEe
Confidence            74322 34455544

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.89  E-value=1.3e-22  Score=173.20  Aligned_cols=203  Identities=16%  Similarity=0.190  Sum_probs=135.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----cCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      ++++||++|||||+|+||+++|++|+++|++|++++|+.++..+..    ......+.++.+|++| .+.+++.+..   
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~-~~~v~~~~~~~~~   99 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccC-hHHHHHHhhhhhh
Confidence            6889999999999999999999999999999999999987654322    1234678899999999 7777655532   


Q ss_pred             ---CCCEEEEcCCCCCCCCCcch----hHH-------------HHHHHHHHH-cCCCEEEEEccceeccCccCccCChhh
Q 022495          135 ---DSEAVVCATGFQPGWDLFAP----WKA-------------INLVEACRK-RGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~~~----~~~-------------~~~l~~~~~-~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                         ++|++|||||..........    +..             ...+..+.. .+.+.++.+||......          
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~----------  169 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG----------  169 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC----------
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc----------
Confidence               59999999997654322111    111             333333333 33457777777643221          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc------cCc-cccCCcCHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET------EDT-LYEGTISRDQVAEVA  259 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~------~~~-~~~~~i~~~Dva~~i  259 (296)
                        ......|+.+|.+.+.+.+       .+||++++|.||.+.++..........      ... ....+..++|+|.++
T Consensus       170 --~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v  247 (294)
T d1w6ua_         170 --SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLA  247 (294)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             --ccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHH
Confidence              1224569999999998775       368999999999998875332211100      001 112367899999998


Q ss_pred             HHHhcCCC--CCCCeEEEEe
Q 022495          260 VEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~~  277 (296)
                      ..++.+..  ..|++..+-+
T Consensus       248 ~fL~sd~s~~itG~~i~vDG  267 (294)
T d1w6ua_         248 AFLCSDYASWINGAVIKFDG  267 (294)
T ss_dssp             HHHTSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhcCCCCcEEEECC
Confidence            88875432  3555655543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.88  E-value=6.3e-23  Score=171.14  Aligned_cols=193  Identities=13%  Similarity=0.096  Sum_probs=133.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHH-------HHhcCCCCEEE
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLS-------EAIGDDSEAVV  140 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-------~~~~~~~d~vv  140 (296)
                      ++|||||+++||+++|+.|+++|++|++.+|+.+..++...   ....++.+|++| .++++       +.+.+ +|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~---~~~~~~~~dv~~-~~~~~~~~~~~~~~~G~-iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA---FAETYPQLKPMS-EQEPAELIEAVTSAYGQ-VDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH---HHHHCTTSEECC-CCSHHHHHHHHHHHHSC-CCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh---hhCcEEEeccCC-HHHHHHHHHHHHHHcCC-CCEEE
Confidence            78999999999999999999999999999998776654332   122344678887 44333       33445 99999


Q ss_pred             EcCCCCCCCCCc-----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHH
Q 022495          141 CATGFQPGWDLF-----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLT  202 (296)
Q Consensus       141 ~~ag~~~~~~~~-----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  202 (296)
                      ||||........     +.+..             +.+++.|++.+-++||++||...+...            .....|
T Consensus        77 nNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~------------~~~~~Y  144 (252)
T d1zmta1          77 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW------------KELSTY  144 (252)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC------------TTCHHH
T ss_pred             ECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc------------cccccc
Confidence            999975432211     11211             788888988887899999998754322            224679


Q ss_pred             HHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc---c--------Cc-cccCCcCHHHHHHHHHHHh
Q 022495          203 LIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET---E--------DT-LYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       203 ~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~---~--------~~-~~~~~i~~~Dva~~i~~~l  263 (296)
                      +.+|.+.+.+.+       ++||+++.|.||.+.++..........   .        .. ....+..++|+|++++.++
T Consensus       145 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~  224 (252)
T d1zmta1         145 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLA  224 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            999999998765       468999999999998875433211100   0        00 0123678999999988887


Q ss_pred             cCCC--CCCCeEEEEe
Q 022495          264 LHPE--SSYKVVEIIS  277 (296)
Q Consensus       264 ~~~~--~~~~~~~i~~  277 (296)
                      .+..  ..|+++.+.+
T Consensus       225 S~~s~~iTG~~i~vdG  240 (252)
T d1zmta1         225 SGSCDYLTGQVFWLAG  240 (252)
T ss_dssp             TTSCGGGTTCEEEEST
T ss_pred             CchhcCCcCCeEEECC
Confidence            5433  3556666644

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.88  E-value=2.8e-22  Score=169.13  Aligned_cols=205  Identities=17%  Similarity=0.180  Sum_probs=137.7

Q ss_pred             hhhccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hh---hcccCCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           59 EENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        59 ~~~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      |.+.+|+||++|||||+++||++++++|+++|++|++.+|+.++ .+   +.+.....++.++.+|++| .+++.+.++.
T Consensus        11 ~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~-~~~v~~~~~~   89 (272)
T d1g0oa_          11 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV-VEDIVRMFEE   89 (272)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCC-HHHHHHHHHH
Confidence            34467899999999999999999999999999999999887543 22   2222345689999999999 7776665543


Q ss_pred             ------CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCCh
Q 022495          135 ------DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       135 ------~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                            ++|++|||+|.........    .+..             +.+++.|++.  +++++++|......        
T Consensus        90 ~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~--------  159 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAK--------  159 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCS--------
T ss_pred             HHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccc--------
Confidence                  4999999999754332211    1111             5666666554  47888877643211        


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc----------eeec-------ccCcccc
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN----------IIME-------TEDTLYE  247 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~----------~~~~-------~~~~~~~  247 (296)
                         +...+..|+.+|++++.+.+       .+|++++.|.||.+.++.....          ....       .......
T Consensus       160 ---~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg  236 (272)
T d1g0oa_         160 ---AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR  236 (272)
T ss_dssp             ---SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC
T ss_pred             ---cccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC
Confidence               11235669999999998775       3699999999999987531110          0000       0001113


Q ss_pred             CCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          248 GTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       248 ~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      .+..++|+|.+++.++.+..  ..|+++.+.+
T Consensus       237 R~~~peevA~~v~fL~s~~s~~itG~~i~vDG  268 (272)
T d1g0oa_         237 RVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  268 (272)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCceEeECC
Confidence            47889999999888876433  2455554443

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.88  E-value=8e-23  Score=171.28  Aligned_cols=200  Identities=19%  Similarity=0.241  Sum_probs=133.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch-hh---hcccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK-AK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+|.||++|||||+++||+++++.|+++|++|++.+|+.++ .+   +.+...+.++.++.+|++| .+++++.++.   
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~-~~~v~~~~~~~~~   80 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK-PSEVVALFDKAVS   80 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCC-HHHHHHHHHHHHH
Confidence            36789999999999999999999999999999987766443 22   2232345689999999999 7777765542   


Q ss_pred             ---CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEcccee-ccCccCccCChhh
Q 022495          135 ---DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILV-NGAAMGQILNPAY  193 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~-~~~~~~~~~~~~~  193 (296)
                         ++|++|||||.........    .+..             +.+++.|++.+  ++++++|... +..          
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g--~~iii~s~~~~~~~----------  148 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG--RIILTSSIAAVMTG----------  148 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE--EEEEECCGGGTCCS----------
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC--cccccccccccccC----------
Confidence               5999999999765433221    1111             66666665543  6777766532 211          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCc---------eeec--------ccCccccCC
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGN---------IIME--------TEDTLYEGT  249 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~---------~~~~--------~~~~~~~~~  249 (296)
                        ...+..|+.+|++.+.+.+       ..|++++.|.||++.++.....         ....        ........+
T Consensus       149 --~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~  226 (259)
T d1ja9a_         149 --IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRI  226 (259)
T ss_dssp             --CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSC
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCC
Confidence              1124669999999998765       3689999999999987521100         0000        000111246


Q ss_pred             cCHHHHHHHHHHHhcCCC--CCCCeEEEE
Q 022495          250 ISRDQVAEVAVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       250 i~~~Dva~~i~~~l~~~~--~~~~~~~i~  276 (296)
                      ..++|+|++++.++.+..  -.|.++.+-
T Consensus       227 g~p~eVa~~v~fL~S~~a~~itG~~i~vD  255 (259)
T d1ja9a_         227 GYPADIGRAVSALCQEESEWINGQVIKLT  255 (259)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCceEEeC
Confidence            789999999888776543  244555443

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=2e-23  Score=174.72  Aligned_cols=202  Identities=19%  Similarity=0.219  Sum_probs=128.2

Q ss_pred             ccCCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcchhhhc--ccCCCCCeEEEEcccCCChHHHHHHhcC---
Q 022495           62 VSVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKAKTT--LSKDNPSLQIVKADVTEGSAKLSEAIGD---  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~---  134 (296)
                      .+|++|++|||||+|  +||++++++|+++|++|++.+|+++...+.  .........++++|++| .++++++++.   
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~   82 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQ-DEELDALFAGVKE   82 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCC-HHHHHHHHHHHHH
Confidence            478899999999988  899999999999999999988886543321  11133567889999999 7776665532   


Q ss_pred             ---CCCEEEEcCCCCCCC-------C-CcchhHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChh
Q 022495          135 ---DSEAVVCATGFQPGW-------D-LFAPWKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPA  192 (296)
Q Consensus       135 ---~~d~vv~~ag~~~~~-------~-~~~~~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~  192 (296)
                         ++|++|||||.....       + ....+..         ..+.+++...  +-++||++||.......        
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~--------  154 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV--------  154 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC--------
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC--------
Confidence               499999999975311       1 0111111         2222222211  12589999998654321        


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeeccc-----Cc-cccCCcCHHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETE-----DT-LYEGTISRDQVAEVA  259 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~-----~~-~~~~~i~~~Dva~~i  259 (296)
                          ..+..|+.+|++.+.+.+       .+|++++.|.||.+.++...........     .. ....+..++|+|+++
T Consensus       155 ----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  230 (256)
T d1ulua_         155 ----PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLG  230 (256)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                225679999999998765       3699999999999988653322111000     00 112367899999998


Q ss_pred             HHHhcCCC--CCCCeEEEE
Q 022495          260 VEALLHPE--SSYKVVEII  276 (296)
Q Consensus       260 ~~~l~~~~--~~~~~~~i~  276 (296)
                      +.++.+..  ..|+++.+-
T Consensus       231 ~fL~S~~s~~itG~~i~VD  249 (256)
T d1ulua_         231 LFLLSPLASGITGEVVYVD  249 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCchhCCccCCeEEEC
Confidence            87775432  244455443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.7e-21  Score=162.06  Aligned_cols=199  Identities=14%  Similarity=0.045  Sum_probs=135.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC------CC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD------DS  136 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------~~  136 (296)
                      +++||++|||||+++||+++|++|+++|++|++++|+.++.++...........+.+|+.+ .+.+.+.+..      ..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS-EKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccc-cccccccccccccccccc
Confidence            6789999999999999999999999999999999999887766554345678889999998 6554433321      48


Q ss_pred             CEEEEcCCCCCCCC----------CcchhHH-------------HHHHHHHHHc------CCCEEEEEccceeccCccCc
Q 022495          137 EAVVCATGFQPGWD----------LFAPWKA-------------INLVEACRKR------GVNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       137 d~vv~~ag~~~~~~----------~~~~~~~-------------~~~l~~~~~~------~~~~iV~~SS~~~~~~~~~~  187 (296)
                      |.++++++......          ..+.+..             +.+++.+.+.      +.++||++||...+..    
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~----  156 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG----  156 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC----
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC----
Confidence            99999876533211          0111111             4444544332      3458999999975432    


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee---c--ccCccccCCcCHHHH
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM---E--TEDTLYEGTISRDQV  255 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~---~--~~~~~~~~~i~~~Dv  255 (296)
                              ...+..|+.+|++.+.+.+       .+|++++.|.||.+.++.......-   .  ........+..++|+
T Consensus       157 --------~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peev  228 (248)
T d2o23a1         157 --------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEY  228 (248)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHH
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHH
Confidence                    2235679999999998775       3689999999999988753321100   0  000111236789999


Q ss_pred             HHHHHHHhcCCCCCCCeEE
Q 022495          256 AEVAVEALLHPESSYKVVE  274 (296)
Q Consensus       256 a~~i~~~l~~~~~~~~~~~  274 (296)
                      |++++.++.++...|++.+
T Consensus       229 A~~v~fL~s~~~itGq~I~  247 (248)
T d2o23a1         229 AHLVQAIIENPFLNGEVIR  247 (248)
T ss_dssp             HHHHHHHHHCTTCCSCEEE
T ss_pred             HHHHHHHHhCCCCCceEeE
Confidence            9999988876545555554

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.9e-21  Score=164.93  Aligned_cols=189  Identities=18%  Similarity=0.218  Sum_probs=131.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEE---EcCcchhhh------cccCCCCCeEEEEcccCCChHHHHHHhcC--
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAG---VRDLDKAKT------TLSKDNPSLQIVKADVTEGSAKLSEAIGD--  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~---~r~~~~~~~------~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--  134 (296)
                      .|.||||||+++||+++|+.|+++|++|+.+   .|+.+...+      .+.....++..+.+|++| .+++.++++.  
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD-SKSVAAARERVT   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC-HHHHHHHHHTCT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc-hHhhhhhhhhcc
Confidence            4678999999999999999999999886555   444333221      122245689999999999 8888877644  


Q ss_pred             --CCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          135 --DSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                        .+|++|||||........    +.+..             +.+++.|++.+-++||++||+......           
T Consensus        81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~-----------  149 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----------  149 (285)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------
T ss_pred             ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC-----------
Confidence              699999999975433211    11111             888899998888899999999754321           


Q ss_pred             hhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-----cc----------------Ccccc
Q 022495          196 LNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-----TE----------------DTLYE  247 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-----~~----------------~~~~~  247 (296)
                       .....|+++|++.+.+.+       .+|++++.|.||++.++........+     ..                .....
T Consensus       150 -~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
T d1jtva_         150 -PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFRE  228 (285)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcc
Confidence             225679999999998764       46999999999999987543221100     00                00011


Q ss_pred             CCcCHHHHHHHHHHHhcCCC
Q 022495          248 GTISRDQVAEVAVEALLHPE  267 (296)
Q Consensus       248 ~~i~~~Dva~~i~~~l~~~~  267 (296)
                      ....++|+|++++.++..+.
T Consensus       229 ~~~~PeeVA~~v~~~~~~~~  248 (285)
T d1jtva_         229 AAQNPEEVAEVFLTALRAPK  248 (285)
T ss_dssp             HCBCHHHHHHHHHHHHHCSS
T ss_pred             cCCCHHHHHHHHHHHHhCCC
Confidence            25689999999999998754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.87  E-value=4.5e-21  Score=159.72  Aligned_cols=193  Identities=15%  Similarity=0.122  Sum_probs=128.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC--------
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD--------  134 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--------  134 (296)
                      +.|+||||||+++||+++|++|+++|+  +|++..|+.+++.++......++.++.+|++| .++++++++.        
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC-HHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999995  68888999988777655556789999999999 7777655432        


Q ss_pred             CCCEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcC-----------CCEEEEEccceeccCcc
Q 022495          135 DSEAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRG-----------VNRFILISSILVNGAAM  185 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~-----------~~~iV~~SS~~~~~~~~  185 (296)
                      ++|++|||||+......     .+.+..             +.+++.+++.+           .++++.+|+...+-...
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            49999999997543111     111111             66677776542           25788888765432111


Q ss_pred             CccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHH
Q 022495          186 GQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEV  258 (296)
Q Consensus       186 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~  258 (296)
                      .     ......+...|+.||+++..+.+       +.|++++.|.||++.++....           ...+++++.++.
T Consensus       161 ~-----~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~-----------~~~~~~e~~a~~  224 (250)
T d1yo6a1         161 T-----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------NAALTVEQSTAE  224 (250)
T ss_dssp             C-----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------HHHHHH
T ss_pred             c-----ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC-----------CCCCCHHHHHHH
Confidence            1     00112234569999999987764       468999999999998865221           235678999999


Q ss_pred             HHHHhcCCC--CCCCeEE
Q 022495          259 AVEALLHPE--SSYKVVE  274 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~  274 (296)
                      ++..+..+.  ..|+.|+
T Consensus       225 ~~~~~~~~~~~~sG~f~~  242 (250)
T d1yo6a1         225 LISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             HHHHHTTCCGGGTTCEEE
T ss_pred             HHHHHhcCCCCCCeEEEC
Confidence            999887543  3455443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=1.6e-21  Score=166.33  Aligned_cols=211  Identities=17%  Similarity=0.203  Sum_probs=138.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchh--hhcccCCCCCeEEEEcccCCChHH-HHHH-----hcCCCCEE
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA--KTTLSKDNPSLQIVKADVTEGSAK-LSEA-----IGDDSEAV  139 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~~~~~~~~~~D~~d~~~~-~~~~-----~~~~~d~v  139 (296)
                      ||||||+||||++|+++|+++|+ +|+++++-....  ....  . .    ...|..+ .+. ....     +.. ++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~--~-~----~~~~~~~-~~~~~~~~~~~~~~~~-~~~i   72 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV--D-L----NIADYMD-KEDFLIQIMAGEEFGD-VEAI   72 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH--T-S----CCSEEEE-HHHHHHHHHTTCCCSS-CCEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc--c-c----chhhhcc-chHHHHHHhhhhcccc-hhhh
Confidence            89999999999999999999995 688876432221  1111  1 1    1122222 222 2222     233 8899


Q ss_pred             EEcCCCCCCCCCcchhHH-------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHH
Q 022495          140 VCATGFQPGWDLFAPWKA-------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQY  212 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~-------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  212 (296)
                      +|+|+.............       .+++++++..+++ +|+.||..+|.........+ ..+..+.+.|+.+|.+.|.+
T Consensus        73 ~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~-~~~~~~~~~Y~~~K~~~e~~  150 (307)
T d1eq2a_          73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIES-REYEKPLNVYGYSKFLFDEY  150 (307)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSS-GGGCCCSSHHHHHHHHHHHH
T ss_pred             hhhccccccccccccccccccccccccccccccccccc-cccccccccccccccccccc-ccccccccccccccchhhhh
Confidence            999986543332221111       7888999998885 66666666665444333222 23456678899999999988


Q ss_pred             HH----HhCCcEEEEecCcccCCCCCCce--------------------eecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          213 IR----KSGINYTIIRPGGLRNEPPTGNI--------------------IMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       213 ~~----~~~~~~~~lrp~~i~g~~~~~~~--------------------~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      ++    +.+++++++||+.+||+......                    ...+.......+++++|+++++..++..+. 
T Consensus       151 ~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-  229 (307)
T d1eq2a_         151 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  229 (307)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-
T ss_pred             ccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-
Confidence            76    46899999999999998543110                    011222333568999999999999888653 


Q ss_pred             CCCeEEEEeCCCCCCCCHHHHHHHhhc
Q 022495          269 SYKVVEIISRVDAPKRSYEDLFGSIKQ  295 (296)
Q Consensus       269 ~~~~~~i~~~~~~~~~~~~el~~~i~~  295 (296)
                       ...|++++   +...++.|+++++.+
T Consensus       230 -~~~~~~~~---~~~~si~~i~~~i~~  252 (307)
T d1eq2a_         230 -SGIFNLGT---GRAESFQAVADATLA  252 (307)
T ss_dssp             -CEEEEESC---SCCBCHHHHHHHC--
T ss_pred             -cccccccc---ccchhHHHHHHHHHH
Confidence             45888888   799999999998864

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=3.1e-22  Score=167.73  Aligned_cols=191  Identities=13%  Similarity=0.110  Sum_probs=133.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHH---CCCeEEEEEcCcchhhhccc-----CCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLA---KGFAVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      .|++|+++||||+++||+++|++|++   +|++|++++|+++++++...     ..+.++.++.+|++| .+.+.++++.
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~-~~~v~~l~~~   81 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT-EAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS-HHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCC-HHHHHHHHHH
Confidence            46799999999999999999999986   79999999999887664321     134578999999999 8777766521


Q ss_pred             ----------CCCEEEEcCCCCCCCC-----C--cchhHH-------------HHHHHHHHHcC--CCEEEEEccceecc
Q 022495          135 ----------DSEAVVCATGFQPGWD-----L--FAPWKA-------------INLVEACRKRG--VNRFILISSILVNG  182 (296)
Q Consensus       135 ----------~~d~vv~~ag~~~~~~-----~--~~~~~~-------------~~~l~~~~~~~--~~~iV~~SS~~~~~  182 (296)
                                .+|++|||||......     .  .+.+..             +.+++.|++.+  .++||++||...+.
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence                      4789999999643211     1  111111             66666666654  46899999986543


Q ss_pred             CccCccCChhhhhhhhhHHHHHHHHHHHHHHH-----HhCCcEEEEecCcccCCCCCCceeecc---------cCccccC
Q 022495          183 AAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-----KSGINYTIIRPGGLRNEPPTGNIIMET---------EDTLYEG  248 (296)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-----~~~~~~~~lrp~~i~g~~~~~~~~~~~---------~~~~~~~  248 (296)
                      .            ...+..|+.+|++.+.+.+     ..|++++.|.||.+.++..........         .......
T Consensus       162 ~------------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r  229 (259)
T d1oaaa_         162 P------------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGA  229 (259)
T ss_dssp             C------------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTC
T ss_pred             C------------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCC
Confidence            2            2235779999999998765     368999999999998864211000000         0001123


Q ss_pred             CcCHHHHHHHHHHHhcCC
Q 022495          249 TISRDQVAEVAVEALLHP  266 (296)
Q Consensus       249 ~i~~~Dva~~i~~~l~~~  266 (296)
                      +..++|+|++++.++...
T Consensus       230 ~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         230 LVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             SBCHHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHhhhc
Confidence            578999999999988653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.85  E-value=1.7e-20  Score=155.97  Aligned_cols=158  Identities=16%  Similarity=0.175  Sum_probs=114.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHH---CCCeEEEEEcCcchhhhccc--CCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLA---KGFAVKAGVRDLDKAKTTLS--KDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ||+||||||+++||+++|++|++   +|++|++.+|++++++++..  ....++.++.+|++| .++++++++.      
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEGVTK   80 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHHHHG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc-HHHHHHHHhhhHHHhh
Confidence            68999999999999999999974   68999999999887654321  134689999999999 7766654331      


Q ss_pred             --CCCEEEEcCCCCCCCCCc---c--hhHH-------------HHHHHHHHHc-----------CCCEEEEEccceeccC
Q 022495          135 --DSEAVVCATGFQPGWDLF---A--PWKA-------------INLVEACRKR-----------GVNRFILISSILVNGA  183 (296)
Q Consensus       135 --~~d~vv~~ag~~~~~~~~---~--~~~~-------------~~~l~~~~~~-----------~~~~iV~~SS~~~~~~  183 (296)
                        ++|++|||||+.......   .  .+..             +.+++.+++.           +.+++|++||....-.
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence              599999999975432211   1  1111             6667777653           3469999999853211


Q ss_pred             ccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCC
Q 022495          184 AMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP  233 (296)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~  233 (296)
                      ..         +...+..|+.+|++...+.+       +.|++++.|.||++.++..
T Consensus       161 ~~---------~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~  208 (248)
T d1snya_         161 GN---------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  208 (248)
T ss_dssp             TC---------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             CC---------CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcc
Confidence            10         12224579999999987664       4689999999999998764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.5e-20  Score=158.17  Aligned_cols=184  Identities=13%  Similarity=0.194  Sum_probs=131.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHHHHHH-------h
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAKLSEA-------I  132 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~-------~  132 (296)
                      ++||++|||||+++||+++|++|+++|++|++++|+.+++++...    .....+..+.+|+.+ .+.....       +
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED-MTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhh-HHHHHHHHHHHHHHh
Confidence            789999999999999999999999999999999999887665432    234568888999998 5544433       3


Q ss_pred             cCCCCEEEEcCCCCCCCCCc----chhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhh
Q 022495          133 GDDSEAVVCATGFQPGWDLF----APWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIF  195 (296)
Q Consensus       133 ~~~~d~vv~~ag~~~~~~~~----~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~  195 (296)
                      +. +|++++|||........    +.+..             +.+++.|++.+ +++|++||...+..            
T Consensus        91 g~-~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G~ii~isS~~~~~~------------  156 (269)
T d1xu9a_          91 GG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVA------------  156 (269)
T ss_dssp             TS-CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSC------------
T ss_pred             CC-ccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-CcceEeccchhcCC------------
Confidence            44 99999999875432211    11111             77888887654 79999999875422            


Q ss_pred             hhhhHHHHHHHHHHHHHHH---------HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCC
Q 022495          196 LNVFGLTLIAKLQAEQYIR---------KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHP  266 (296)
Q Consensus       196 ~~~~~~y~~sK~~~e~~~~---------~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~  266 (296)
                      ......|+.+|++.+.+.+         ..+++++.|.||.+.++......    .........+++++|+.++..+...
T Consensus       157 ~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~----~~~~~~~~~~~e~~a~~i~~~~~~~  232 (269)
T d1xu9a_         157 YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV----SGIVHMQAAPKEECALEIIKGGALR  232 (269)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS----CGGGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhc----cCCccccCCCHHHHHHHHHHHhhcC
Confidence            2235779999999987654         13689999999999885321110    1111223577899999998877643

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.85  E-value=1.8e-20  Score=156.81  Aligned_cols=190  Identities=19%  Similarity=0.155  Sum_probs=131.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchh---hhc---ccCCCCCeEEEEcccCCChHHHHHHhcC----
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKA---KTT---LSKDNPSLQIVKADVTEGSAKLSEAIGD----  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~----  134 (296)
                      +.+||||||+|+||++++++|+++|+ +|+++.|+..+.   .+.   +.....++.++.+|++| .+.+.+++..    
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d-~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD-RESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch-HHHHHHhhcccccc
Confidence            45999999999999999999999998 588888874332   211   11245679999999999 8888887754    


Q ss_pred             -CCCEEEEcCCCCCCCCCcch----hHH---------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          135 -DSEAVVCATGFQPGWDLFAP----WKA---------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~~~----~~~---------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                       ++|.||||+|........+.    +..         .++.++++..+.++||++||+...-...+            ..
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~------------~~  155 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG------------LG  155 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT------------CT
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc------------cH
Confidence             58999999997654332211    111         66777777777889999999975432222            34


Q ss_pred             HHHHHHHHHHHHHH---HhCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCCC
Q 022495          201 LTLIAKLQAEQYIR---KSGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPES  268 (296)
Q Consensus       201 ~y~~sK~~~e~~~~---~~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~  268 (296)
                      .|+++|...+.+.+   ..|++++.|.||.+.+..-................++++++++++..++..+..
T Consensus       156 ~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         156 GYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCc
Confidence            58999999987664   579999999999887643211111111111123468899999999999987654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.3e-21  Score=162.04  Aligned_cols=186  Identities=17%  Similarity=0.116  Sum_probs=125.6

Q ss_pred             CCeE-EEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcchhhhcc---cCCCCCeEEEEcccCCChHHHHHHhcC------
Q 022495           66 QKKI-FVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTL---SKDNPSLQIVKADVTEGSAKLSEAIGD------  134 (296)
Q Consensus        66 ~~~i-lVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~------  134 (296)
                      ||+| |||||+++||+++|++|+++ |++|++.+|++++.++..   .....++.++.+|++| .++++++++.      
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~-~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC-HHHHHHHHHHHHHhcC
Confidence            5555 89999999999999999986 899999999988765432   2245689999999999 7776655432      


Q ss_pred             CCCEEEEcCCCCCCCCCcc----hhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCcc---------
Q 022495          135 DSEAVVCATGFQPGWDLFA----PWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQI---------  188 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~~----~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~---------  188 (296)
                      ++|++|||||+........    .+..             +.+++.|++.  +++|++||+..........         
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~~k~~~  158 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRS  158 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhhhhhhcc
Confidence            5999999999754332211    1111             5555555544  5999999986532111100         


Q ss_pred             --CCh------------------hhhhhhhhHHHHHHHHHHHHHHH-------H----hCCcEEEEecCcccCCCCCCce
Q 022495          189 --LNP------------------AYIFLNVFGLTLIAKLQAEQYIR-------K----SGINYTIIRPGGLRNEPPTGNI  237 (296)
Q Consensus       189 --~~~------------------~~~~~~~~~~y~~sK~~~e~~~~-------~----~~~~~~~lrp~~i~g~~~~~~~  237 (296)
                        ...                  ......+...|+.+|++...+.+       +    .+++++.|.||++.++....  
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~--  236 (275)
T d1wmaa1         159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP--  236 (275)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT--
T ss_pred             cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC--
Confidence              000                  00011123569999999876542       1    38999999999999875322  


Q ss_pred             eecccCccccCCcCHHHHHHHHHHHhcC
Q 022495          238 IMETEDTLYEGTISRDQVAEVAVEALLH  265 (296)
Q Consensus       238 ~~~~~~~~~~~~i~~~Dva~~i~~~l~~  265 (296)
                               ....+++|.|+.++.+...
T Consensus       237 ---------~~~~~pee~A~~~~~~a~~  255 (275)
T d1wmaa1         237 ---------KATKSPEEGAETPVYLALL  255 (275)
T ss_dssp             ---------TCSBCHHHHTHHHHHHHSC
T ss_pred             ---------cccCCHHHHHHHHHHHHcC
Confidence                     1245789999988887643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=1.9e-20  Score=154.43  Aligned_cols=187  Identities=15%  Similarity=0.162  Sum_probs=124.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHH-------HHhcC-CC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLS-------EAIGD-DS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-------~~~~~-~~  136 (296)
                      ++|+||||||+|+||+++++.|+++|++|+++++......       .....+.+|..+ .+...       +.++. ++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------SASVIVKMTDSF-TEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------SEEEECCCCSCH-HHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cccceeecccCc-HHHHHHHHHHHHHHhCCCCc
Confidence            3799999999999999999999999999999988765421       223344455544 32222       22232 59


Q ss_pred             CEEEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhh
Q 022495          137 EAVVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNV  198 (296)
Q Consensus       137 d~vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~  198 (296)
                      |++|||||.......     .+.+..             +.+++.|++.  ++||++||.......            ..
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~~------------~~  138 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGT------------PG  138 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCC------------TT
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCCc------------cC
Confidence            999999995332111     111111             4455555443  599999998754322            22


Q ss_pred             hHHHHHHHHHHHHHHHH---------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC--
Q 022495          199 FGLTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE--  267 (296)
Q Consensus       199 ~~~y~~sK~~~e~~~~~---------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--  267 (296)
                      +..|+.+|++++.+.+.         .|++++.|.||.+.++.....    ........++.++|+|+.+..++....  
T Consensus       139 ~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~pe~va~~~~~l~s~~~~~  214 (236)
T d1dhra_         139 MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS----MPEADFSSWTPLEFLVETFHDWITGNKRP  214 (236)
T ss_dssp             BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH----STTSCGGGSEEHHHHHHHHHHHHTTTTCC
T ss_pred             CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhh----CccchhhcCCCHHHHHHHHHHHhCCCccC
Confidence            56799999999988762         479999999999988642211    111123457889999999998886543  


Q ss_pred             CCCCeEEEEe
Q 022495          268 SSYKVVEIIS  277 (296)
Q Consensus       268 ~~~~~~~i~~  277 (296)
                      ..|....+..
T Consensus       215 i~G~~i~v~~  224 (236)
T d1dhra_         215 NSGSLIQVVT  224 (236)
T ss_dssp             CTTCEEEEEE
T ss_pred             CCCCeEEEEE
Confidence            3556666654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.82  E-value=3.8e-20  Score=152.59  Aligned_cols=186  Identities=14%  Similarity=0.093  Sum_probs=123.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHH-------HHHHhcC-CCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAK-------LSEAIGD-DSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~-------~~~~~~~-~~d~  138 (296)
                      .+||||||+|+||++++++|+++|++|++++|++....       .....+.+|+.+ .+.       +...++. ++|+
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------DSNILVDGNKNW-TEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------SEEEECCTTSCH-HHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------cccceeccccCc-hhHHHHHHHHHHHHhcCCCeeE
Confidence            47899999999999999999999999999999876432       223444566655 322       2222222 5999


Q ss_pred             EEEcCCCCCCCCC-----cchhHH-------------HHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhH
Q 022495          139 VVCATGFQPGWDL-----FAPWKA-------------INLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFG  200 (296)
Q Consensus       139 vv~~ag~~~~~~~-----~~~~~~-------------~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~  200 (296)
                      ||||||.......     .+.++.             +.+++.+++.  ++||++||...+...            ..+.
T Consensus        75 linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~------------~~~~  140 (235)
T d1ooea_          75 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPT------------PSMI  140 (235)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCC------------TTBH
T ss_pred             EEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCc------------cccc
Confidence            9999996432211     111211             4444544433  599999998654322            2256


Q ss_pred             HHHHHHHHHHHHHHH---------hCCcEEEEecCcccCCCCCCceeecccCccccCCcCHHHHHHHHHHHhcCCC---C
Q 022495          201 LTLIAKLQAEQYIRK---------SGINYTIIRPGGLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEALLHPE---S  268 (296)
Q Consensus       201 ~y~~sK~~~e~~~~~---------~~~~~~~lrp~~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~---~  268 (296)
                      .|+++|++.+.+.+.         .+++++.|.||.+.++.....+    .......++.++|+++.++.++..+.   .
T Consensus       141 ~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~----~~~~~~~~~~~~~va~~~~~~l~~~~~~~~  216 (235)
T d1ooea_         141 GYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM----PNADHSSWTPLSFISEHLLKWTTETSSRPS  216 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS----TTCCGGGCBCHHHHHHHHHHHHHCGGGCCC
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC----cCCccccCCCHHHHHHHHHHHhcCccccCC
Confidence            799999999988752         3678999999999875422111    11223457899999999887776543   3


Q ss_pred             CCCeEEEEeC
Q 022495          269 SYKVVEIISR  278 (296)
Q Consensus       269 ~~~~~~i~~~  278 (296)
                      .|..+.+...
T Consensus       217 tG~~i~v~~~  226 (235)
T d1ooea_         217 SGALLKITTE  226 (235)
T ss_dssp             TTCEEEEEEE
T ss_pred             CceEEEEEee
Confidence            5666676553

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.80  E-value=3.3e-19  Score=147.26  Aligned_cols=190  Identities=16%  Similarity=0.097  Sum_probs=125.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-----CCCEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-----DSEAVV  140 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~vv  140 (296)
                      .|++|||||+++||+++|+.|+++|++|++.+|+++.         .+...+++|+++ .....+....     ..+.++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~   70 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------EDLIYVEGDVTR-EEDVRRAVARAQEEAPLFAVV   70 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------SSSEEEECCTTC-HHHHHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------ccceEeeccccc-hhhhHHHHHhhhccccccchh
Confidence            3799999999999999999999999999999998753         456778899998 5554444322     356666


Q ss_pred             EcCCCCCCC--------CCcchhHH-------------HHHHHHH------HHcCCCEEEEEccceeccCccCccCChhh
Q 022495          141 CATGFQPGW--------DLFAPWKA-------------INLVEAC------RKRGVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       141 ~~ag~~~~~--------~~~~~~~~-------------~~~l~~~------~~~~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                      ++++.....        .....+..             +.++..+      .+.+.++||++||...+..          
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~----------  140 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG----------  140 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC----------
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC----------
Confidence            666542211        00111111             3333332      2234569999999865422          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee-----cccCccccCCcCHHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM-----ETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~-----~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                        ......|+.+|++++.+.+       .+|++++.|.||.+.++........     .........+..++|+|++++.
T Consensus       141 --~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~f  218 (241)
T d1uaya_         141 --QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLH  218 (241)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHH
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence              2235679999999998775       3689999999999988642221100     0111111235689999999998


Q ss_pred             HhcCCCCCCCeEEEEe
Q 022495          262 ALLHPESSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~~~~~~~~i~~  277 (296)
                      ++.+....|+++.+-+
T Consensus       219 L~s~~~iTG~~i~VDG  234 (241)
T d1uaya_         219 ILENPMLNGEVVRLDG  234 (241)
T ss_dssp             HHHCTTCCSCEEEEST
T ss_pred             HHhCCCCCCCEEEECC
Confidence            8876555666666644

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=2.4e-19  Score=149.84  Aligned_cols=200  Identities=20%  Similarity=0.266  Sum_probs=129.2

Q ss_pred             CCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcchhhhc--ccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKAKTT--LSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      |++|++|||||+|  +||+++|+.|+++|++|++.+|+++.....  ..........+..|+.+ ..+..+.+..     
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAE-DASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccch-HHHHHHHHHHhhhcc
Confidence            5799999999999  899999999999999999999986543321  11133567788899988 6655554432     


Q ss_pred             -CCCEEEEcCCCCCCCCCc-ch--------hHH---------HHHHHHHHHc--CCCEEEEEccceeccCccCccCChhh
Q 022495          135 -DSEAVVCATGFQPGWDLF-AP--------WKA---------INLVEACRKR--GVNRFILISSILVNGAAMGQILNPAY  193 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~~-~~--------~~~---------~~~l~~~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~~  193 (296)
                       ++|++|||++........ ..        +..         ..+.+++...  +-+.+|++||......          
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~----------  151 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------  151 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC----------
Confidence             599999999865322110 00        011         3333333221  2347888888753211          


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-----cCcc-ccCCcCHHHHHHHHH
Q 022495          194 IFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-----EDTL-YEGTISRDQVAEVAV  260 (296)
Q Consensus       194 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-----~~~~-~~~~i~~~Dva~~i~  260 (296)
                        ...+..|+.+|++.+.+.+       .+|++++.|+||.|.++..........     .... ...+..++|+|.+++
T Consensus       152 --~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~  229 (258)
T d1qsga_         152 --IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA  229 (258)
T ss_dssp             --CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             --CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence              1224679999999998775       368999999999999875432210000     0001 123678999999988


Q ss_pred             HHhcCCC--CCCCeEEEE
Q 022495          261 EALLHPE--SSYKVVEII  276 (296)
Q Consensus       261 ~~l~~~~--~~~~~~~i~  276 (296)
                      .++.+..  ..|.++.+-
T Consensus       230 fL~s~~s~~itG~~i~vD  247 (258)
T d1qsga_         230 FLCSDLSAGISGEVVHVD  247 (258)
T ss_dssp             HHTSGGGTTCCSCEEEES
T ss_pred             HHhCchhcCccCceEEEC
Confidence            8775432  345555553

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.79  E-value=5.4e-19  Score=148.91  Aligned_cols=201  Identities=16%  Similarity=0.188  Sum_probs=127.1

Q ss_pred             CCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcchhhhc--ccCCCCCeEEEEcccCCChHHHHHHhcC-----
Q 022495           64 VKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKAKTT--LSKDNPSLQIVKADVTEGSAKLSEAIGD-----  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----  134 (296)
                      |++|++|||||+|  +||+++|+.|+++|++|++.+|+++..+..  +........++.+|+++ .+.+.+++..     
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK-EEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccc-hhhHHHHHHHHHHHc
Confidence            6799999999887  899999999999999999999986422211  11134567888999999 6665555522     


Q ss_pred             -CCCEEEEcCCCCCCCCC---c--chhHH------------HHHHHHHHHc-CCC-EEEEEccceeccCccCccCChhhh
Q 022495          135 -DSEAVVCATGFQPGWDL---F--APWKA------------INLVEACRKR-GVN-RFILISSILVNGAAMGQILNPAYI  194 (296)
Q Consensus       135 -~~d~vv~~ag~~~~~~~---~--~~~~~------------~~~l~~~~~~-~~~-~iV~~SS~~~~~~~~~~~~~~~~~  194 (296)
                       ++|++|||+|.......   .  ..+..            ..+...+.+. +.+ .++++|+.+....           
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~-----------  150 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----------  150 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc-----------
Confidence             49999999997543211   1  11111            2222322222 222 4555555543321           


Q ss_pred             hhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceee------cccCccccCCcCHHHHHHHHHH
Q 022495          195 FLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIM------ETEDTLYEGTISRDQVAEVAVE  261 (296)
Q Consensus       195 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~------~~~~~~~~~~i~~~Dva~~i~~  261 (296)
                       ......|+.+|.+++.+.+       ..|+++++|.||.+.++........      .........+..++|+|.+++.
T Consensus       151 -~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~f  229 (274)
T d2pd4a1         151 -MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMY  229 (274)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             -cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHH
Confidence             1224568999999988765       3689999999999988653221100      0001112347899999999888


Q ss_pred             HhcCCC--CCCCeEEEEe
Q 022495          262 ALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       262 ~l~~~~--~~~~~~~i~~  277 (296)
                      ++.+..  ..|+++.+-+
T Consensus       230 L~S~~s~~itG~~i~vDG  247 (274)
T d2pd4a1         230 LLSSLSSGVSGEVHFVDA  247 (274)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhChhhCCCcCceEEECC
Confidence            876432  3455555533

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.77  E-value=1.2e-18  Score=146.30  Aligned_cols=208  Identities=17%  Similarity=0.146  Sum_probs=126.7

Q ss_pred             cCCCCeEEEEcCC--chHHHHHHHHHHHCCCeEEEEEcCcchhhh-cccCCCCCeEEEEcccCCChHHHHHH-------h
Q 022495           63 SVKQKKIFVAGAT--GSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-TLSKDNPSLQIVKADVTEGSAKLSEA-------I  132 (296)
Q Consensus        63 ~~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~-------~  132 (296)
                      -|++|++|||||+  .+||+++|++|+++|++|++.+|+.++..+ .......+...+++|+++ .+++.++       +
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~-~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN-EEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeeccc-ccccccccchhhhcc
Confidence            3679999999964  579999999999999999999999876533 323345678899999999 6544333       3


Q ss_pred             cC--CCCEEEEcCCCCCCCC----C-cc--hhHH-----------HHHHHHHHHc-CCCEEEEEccceeccCccCccCCh
Q 022495          133 GD--DSEAVVCATGFQPGWD----L-FA--PWKA-----------INLVEACRKR-GVNRFILISSILVNGAAMGQILNP  191 (296)
Q Consensus       133 ~~--~~d~vv~~ag~~~~~~----~-~~--~~~~-----------~~~l~~~~~~-~~~~iV~~SS~~~~~~~~~~~~~~  191 (296)
                      ..  ++|+++||+|+.....    . .+  ....           ......+... +...+++++|......        
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~--------  153 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA--------  153 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC--------
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc--------
Confidence            22  4899999999653211    1 01  1111           2222222221 1234455544432221        


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCC-------Cceee---c-------ccCcccc
Q 022495          192 AYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPT-------GNIIM---E-------TEDTLYE  247 (296)
Q Consensus       192 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~-------~~~~~---~-------~~~~~~~  247 (296)
                          ...+..|+.+|.+.+.+.+       +.+++++.|.||.+.++...       .....   .       .......
T Consensus       154 ----~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~r  229 (268)
T d2h7ma1         154 ----MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGW  229 (268)
T ss_dssp             ----CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCC
T ss_pred             ----CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCC
Confidence                1125679999999998775       36899999999999875311       10000   0       0001112


Q ss_pred             CCcCHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCC
Q 022495          248 GTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKR  284 (296)
Q Consensus       248 ~~i~~~Dva~~i~~~l~~~~~~~~~~~i~~~~~~~~~  284 (296)
                      .+..++|+|+++..++. +...+.+..+...|+|...
T Consensus       230 r~~~p~dva~~v~fL~S-d~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         230 NMKDATPVAKTVCALLS-DWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             CTTCCHHHHHHHHHHHS-SSCTTCCSEEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhC-chhcCccCCEEEECcCccc
Confidence            36789999999888774 4444444444444445543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.75  E-value=5e-18  Score=143.57  Aligned_cols=199  Identities=20%  Similarity=0.147  Sum_probs=117.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchh-hh---cc-cCCCCCe-----------------EEEEcccCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKA-KT---TL-SKDNPSL-----------------QIVKADVTE  123 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~-~~~~~~~-----------------~~~~~D~~d  123 (296)
                      +..+|||||+++||+++|+.|+++|++|++.+|+.+.. .+   .+ .......                 ..+.+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            46899999999999999999999999999988765332 11   11 0012233                 334556777


Q ss_pred             ChHHHHHHhcC------CCCEEEEcCCCCCCCCCcc----hh------------------HH-----HHHHHHH------
Q 022495          124 GSAKLSEAIGD------DSEAVVCATGFQPGWDLFA----PW------------------KA-----INLVEAC------  164 (296)
Q Consensus       124 ~~~~~~~~~~~------~~d~vv~~ag~~~~~~~~~----~~------------------~~-----~~~l~~~------  164 (296)
                       .+.++++++.      ++|++|||||.........    .+                  ..     ..+.+++      
T Consensus        82 -~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          82 -FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             -HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             -HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence             6666655431      4999999999754321110    00                  00     1112221      


Q ss_pred             ----HHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCC
Q 022495          165 ----RKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPP  233 (296)
Q Consensus       165 ----~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~  233 (296)
                          ++.+.+++|+++|......            ...+..|+.+|++.+.+.+       .+|++++.|.||++.....
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~  228 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQP------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD  228 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG
T ss_pred             hHHHhcCCCCcccccccccccCC------------ccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc
Confidence                1123457888888753221            1225679999999998765       4699999999997543221


Q ss_pred             CCceeec---ccCccccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          234 TGNIIME---TEDTLYEGTISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       234 ~~~~~~~---~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      .......   ........+..++|+|++++.++.+..  ..|+++.+-+
T Consensus       229 ~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDG  277 (284)
T d1e7wa_         229 MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  277 (284)
T ss_dssp             SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECc
Confidence            1111000   001111236789999999888775432  3455555543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.75  E-value=4.4e-17  Score=136.32  Aligned_cols=198  Identities=17%  Similarity=0.149  Sum_probs=122.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh-----cccCCCCCeEEEEcccCCC---hHHH-------HHH
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT-----TLSKDNPSLQIVKADVTEG---SAKL-------SEA  131 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~D~~d~---~~~~-------~~~  131 (296)
                      .++|||||+++||+++|++|+++|++|++++|+.++..+     ...........+..|+.+.   .+.+       .+.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999998765322     1112345677777777652   1222       234


Q ss_pred             hcCCCCEEEEcCCCCCCCCCcc-----------hhHH-------------HHHHHHHHH---------cCCCEEEEEccc
Q 022495          132 IGDDSEAVVCATGFQPGWDLFA-----------PWKA-------------INLVEACRK---------RGVNRFILISSI  178 (296)
Q Consensus       132 ~~~~~d~vv~~ag~~~~~~~~~-----------~~~~-------------~~~l~~~~~---------~~~~~iV~~SS~  178 (296)
                      +++ +|++|||||+........           ....             .........         .....++.+|+.
T Consensus        82 ~g~-iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          82 FGR-CDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HSC-CCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             hCC-CCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            455 999999999754322110           0000             001111111         112366666666


Q ss_pred             eeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeec-ccCccc--cC
Q 022495          179 LVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIME-TEDTLY--EG  248 (296)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~-~~~~~~--~~  248 (296)
                      .....            ...+..|+.+|++.+.+.+       .+|++++.|.||.+.++......... ......  ..
T Consensus       161 ~~~~~------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl~r~  228 (266)
T d1mxha_         161 MTDLP------------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQS  228 (266)
T ss_dssp             GGGSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSC
T ss_pred             ccccc------------CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCCCCC
Confidence            43221            2236779999999998765       36899999999999876533321111 011111  22


Q ss_pred             CcCHHHHHHHHHHHhcCCC--CCCCeEEEEe
Q 022495          249 TISRDQVAEVAVEALLHPE--SSYKVVEIIS  277 (296)
Q Consensus       249 ~i~~~Dva~~i~~~l~~~~--~~~~~~~i~~  277 (296)
                      +.+++|+|++++.++.+..  ..|+++.+-+
T Consensus       229 ~~~peeva~~v~fL~s~~s~~itG~~i~vDG  259 (266)
T d1mxha_         229 EASAAQIADAIAFLVSKDAGYITGTTLKVDG  259 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence            4689999999888886532  3555655543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.73  E-value=2.1e-16  Score=131.51  Aligned_cols=195  Identities=15%  Similarity=0.070  Sum_probs=113.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHh----cC---CCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAI----GD---DSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~---~~d~  138 (296)
                      ||.||||||+++||+++|++|+++|++|++++|+..+.              ..|+.+ .+......    ..   .+|+
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~--------------~~d~~~-~~~~~~~~~~~~~~~~~~id~   65 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV--------------IADLST-AEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE--------------ECCTTS-HHHHHHHHHHHHTTCTTCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH--------------HHHhcC-HHHHHHHHHHHHHHhCCCCcE
Confidence            57899999999999999999999999999999976432              346666 43333221    11   4999


Q ss_pred             EEEcCCCCCCCCCcchhHH----------HHHHHHHHHcCCCEEEEEccceeccCc-cCccCChh---------------
Q 022495          139 VVCATGFQPGWDLFAPWKA----------INLVEACRKRGVNRFILISSILVNGAA-MGQILNPA---------------  192 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~----------~~~l~~~~~~~~~~iV~~SS~~~~~~~-~~~~~~~~---------------  192 (296)
                      +++|||+............          ....+...+........+++.....-. ...+....               
T Consensus        66 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~  145 (257)
T d1fjha_          66 LVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH  145 (257)
T ss_dssp             EEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred             EEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhc
Confidence            9999997654433221111          444555555555566666665321110 00000000               


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHH-------HhCCcEEEEecCcccCCCCCCceeecc-------cCccccCCcCHHHHHHH
Q 022495          193 YIFLNVFGLTLIAKLQAEQYIR-------KSGINYTIIRPGGLRNEPPTGNIIMET-------EDTLYEGTISRDQVAEV  258 (296)
Q Consensus       193 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~~lrp~~i~g~~~~~~~~~~~-------~~~~~~~~i~~~Dva~~  258 (296)
                      .....+...|+.+|++.+.+.+       .+||+++.|.||.+.++.......-..       .......+..++|+|++
T Consensus       146 ~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~  225 (257)
T d1fjha_         146 AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASV  225 (257)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHH
T ss_pred             cCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence            0012234569999999998775       468999999999998865332211100       00111236789999999


Q ss_pred             HHHHhcCCC--CCCCeEEE
Q 022495          259 AVEALLHPE--SSYKVVEI  275 (296)
Q Consensus       259 i~~~l~~~~--~~~~~~~i  275 (296)
                      ++.++....  ..|+++.+
T Consensus       226 v~fL~S~~s~~itG~~i~v  244 (257)
T d1fjha_         226 IAFLMSPAASYVHGAQIVI  244 (257)
T ss_dssp             HHHHTSGGGTTCCSCEEEE
T ss_pred             HHHHhCchhCCccCceEEe
Confidence            887764332  34555555

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.68  E-value=9.2e-17  Score=136.55  Aligned_cols=203  Identities=16%  Similarity=0.156  Sum_probs=114.9

Q ss_pred             ccCCCCeEEEEcCCc--hHHHHHHHHHHHCCCeEEEEEcCcchhh-------------hcccC-CCCCe-EEEEcc--c-
Q 022495           62 VSVKQKKIFVAGATG--SSGKRIVEQLLAKGFAVKAGVRDLDKAK-------------TTLSK-DNPSL-QIVKAD--V-  121 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------~~~~~-~~~~~-~~~~~D--~-  121 (296)
                      ++|++|++|||||+|  +||+++|+.|+++|++|++.+|++....             ..... ...+. ....+|  + 
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            578999999999887  9999999999999999999998753211             00000 00111 122222  1 


Q ss_pred             -----------------CCC------hHHHHHHhcCCCCEEEEcCCCCCCCC-Cc-----chhHH---------HHHHHH
Q 022495          122 -----------------TEG------SAKLSEAIGDDSEAVVCATGFQPGWD-LF-----APWKA---------INLVEA  163 (296)
Q Consensus       122 -----------------~d~------~~~~~~~~~~~~d~vv~~ag~~~~~~-~~-----~~~~~---------~~~l~~  163 (296)
                                       .+.      .+.+.+.+.. +|++|||||...... ..     +.+..         ..+.++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~-iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGS-IDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSC-EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCC-CcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence                             110      1233344556 999999999643211 11     11111         222333


Q ss_pred             HHHcC--CCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH--------HhCCcEEEEecCcccCCCC
Q 022495          164 CRKRG--VNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR--------KSGINYTIIRPGGLRNEPP  233 (296)
Q Consensus       164 ~~~~~--~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~~~~~~lrp~~i~g~~~  233 (296)
                      +....  -++++.+++.+.....           ......|..+|.+.+.+.+        +++++++.|.||++.++..
T Consensus       163 ~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~  231 (297)
T d1d7oa_         163 FLPIMNPGGASISLTYIASERII-----------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA  231 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCC-----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred             HHHHhhcCCcceeeeehhhcccc-----------cccccceecccccccccccccchhccccceEEecccccccccchhh
Confidence            32221  2355666655432211           1123457888887775543        4689999999999998764


Q ss_pred             CCceeeccc-----Ccc-ccCCcCHHHHHHHHHHHhcCCC--CCCCeEEEE
Q 022495          234 TGNIIMETE-----DTL-YEGTISRDQVAEVAVEALLHPE--SSYKVVEII  276 (296)
Q Consensus       234 ~~~~~~~~~-----~~~-~~~~i~~~Dva~~i~~~l~~~~--~~~~~~~i~  276 (296)
                      .........     ... ...+..++|+|++++.++....  ..|+++.+-
T Consensus       232 ~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vD  282 (297)
T d1d7oa_         232 KAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVD  282 (297)
T ss_dssp             SCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEEC
Confidence            432111000     001 1236789999999887775322  345555553

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.61  E-value=4e-16  Score=134.48  Aligned_cols=152  Identities=17%  Similarity=0.167  Sum_probs=93.0

Q ss_pred             CCeEEEEc--CCchHHHHHHHHHHHCCCeEEEEEcCcchhhh------------cccC---CCCCeEEEEc---------
Q 022495           66 QKKIFVAG--ATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT------------TLSK---DNPSLQIVKA---------  119 (296)
Q Consensus        66 ~~~ilVtG--a~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~---~~~~~~~~~~---------  119 (296)
                      +|.+||||  ++++||+++++.|+++|++|++.++.......            ....   .........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            68999999  55799999999999999999998876532110            0000   0111223333         


Q ss_pred             -----------ccCCChH-------HHHHHhcCCCCEEEEcCCCCCCC--CCc----chhHH---------HHHHHHHHH
Q 022495          120 -----------DVTEGSA-------KLSEAIGDDSEAVVCATGFQPGW--DLF----APWKA---------INLVEACRK  166 (296)
Q Consensus       120 -----------D~~d~~~-------~~~~~~~~~~d~vv~~ag~~~~~--~~~----~~~~~---------~~~l~~~~~  166 (296)
                                 |+.+ .+       .+.+.+++ +|++|||||.....  +..    +.+..         ..+.+++..
T Consensus        82 ~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~G~-iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQ-NYTIEDVANLIHQKYGK-INMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             CCHHHHTSHHHHTCC-CCSHHHHHHHHHHHHCC-EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             cchhhhhhhhhhhhh-HHHHHHHHHHHHHHhCC-CCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                       4444 22       23344555 99999999865421  111    11111         222333322


Q ss_pred             c--CCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHH--------HhCCcEEEEecCcccC
Q 022495          167 R--GVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIR--------KSGINYTIIRPGGLRN  230 (296)
Q Consensus       167 ~--~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~~~~~~lrp~~i~g  230 (296)
                      .  .-++||.+||.+.....      +     .+.+.|+.+|++++.+.+        ++|||++.|.||.|.+
T Consensus       160 ~m~~~GsIv~iss~~~~~~~------p-----~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         160 IMKPQSSIISLTYHASQKVV------P-----GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             GEEEEEEEEEEECGGGTSCC------T-----TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             hcccccccccceeehhcccc------c-----ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            1  13589999987643211      1     113458899999987664        3699999999999977

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.50  E-value=1.2e-14  Score=115.18  Aligned_cols=83  Identities=29%  Similarity=0.318  Sum_probs=71.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      .++++|+|+||||+|+||+.+++.|+++|++|++++|+.++..+....  ...++....+|++| .+.+.+.+++ +|+|
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~-iDil   96 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-DASRAEAVKG-AHFV   96 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-HHHHHHHTTT-CSEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhccc-HHHHHHHhcC-cCee
Confidence            578999999999999999999999999999999999998776543321  12456678899999 8999999999 9999


Q ss_pred             EEcCCCC
Q 022495          140 VCATGFQ  146 (296)
Q Consensus       140 v~~ag~~  146 (296)
                      |||||..
T Consensus        97 in~Ag~g  103 (191)
T d1luaa1          97 FTAGAIG  103 (191)
T ss_dssp             EECCCTT
T ss_pred             eecCccc
Confidence            9999864

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.80  E-value=2.1e-08  Score=73.54  Aligned_cols=95  Identities=23%  Similarity=0.284  Sum_probs=72.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag~  145 (296)
                      |+|+|.|+ |.+|+.+++.|.++|++|++++++++.......  ..++.++.+|.+| .+.+.++ ++. .|.++.+...
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~--~~~~~vi~Gd~~~-~~~l~~~~i~~-a~~vv~~t~~   75 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA--EIDALVINGDCTK-IKTLEDAGIED-ADMYIAVTGK   75 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HCSSEEEESCTTS-HHHHHHTTTTT-CSEEEECCSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhh--hhhhhhccCcccc-hhhhhhcChhh-hhhhcccCCc
Confidence            68999997 999999999999999999999999987765432  1367899999999 8888876 455 9999976531


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                              ......+...+++.+.+++|-
T Consensus        76 --------d~~N~~~~~~~k~~~~~~iI~   96 (132)
T d1lssa_          76 --------EEVNLMSSLLAKSYGINKTIA   96 (132)
T ss_dssp             --------HHHHHHHHHHHHHTTCCCEEE
T ss_pred             --------HHHHHHHHHHHHHcCCceEEE
Confidence                    111133445567778777764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.58  E-value=5.4e-07  Score=65.88  Aligned_cols=98  Identities=23%  Similarity=0.189  Sum_probs=72.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag~  145 (296)
                      |+++|.|+ |.+|+.+++.|.++|++|++++.+++.......   .....+.+|.+| .+.+.++ +.. +|.||-+.+-
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~---~~~~~~~gd~~~-~~~l~~a~i~~-a~~vi~~~~~   74 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATE-ENELLSLGIRN-FEYVIVAIGA   74 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT---TCSEEEECCTTC-TTHHHHHTGGG-CSEEEECCCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH---hCCcceeeeccc-chhhhccCCcc-ccEEEEEcCc
Confidence            57889986 999999999999999999999999988776543   456788899999 7888877 666 9998877641


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                             .......+.-.++..+..+++--..
T Consensus        75 -------~~~~~~~~~~~~~~~~~~~iiar~~   99 (134)
T d2hmva1          75 -------NIQASTLTTLLLKELDIPNIWVKAQ   99 (134)
T ss_dssp             -------CHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             -------hHHhHHHHHHHHHHcCCCcEEeecc
Confidence                   1111133334455666667665443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.52  E-value=2.4e-07  Score=71.14  Aligned_cols=75  Identities=20%  Similarity=0.325  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .|+|+|.|| |.+|+.+|+.|.++|++|++++|+.++..++.. ..........+..+ .......+.. .|.++.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~-~~~~~~~~~~~~~~-~~~~~~~i~~-~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA-GVQHSTPISLDVND-DAALDAEVAK-HDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT-TCTTEEEEECCTTC-HHHHHHHHTT-SSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh-cccccccccccccc-hhhhHhhhhc-cceeEeecc
Confidence            589999987 999999999999999999999999998877654 33455556667666 6777777887 888887653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.48  E-value=1e-06  Score=65.13  Aligned_cols=106  Identities=18%  Similarity=0.150  Sum_probs=67.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      ||.|+||+|.+|++++..|..+|  .++++++.++.+...+-............-+ . .....+.+++ +|+||.+||.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~-~~~~~~~~~~-aDivVitag~   78 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-G-PEQLPDCLKG-CDVVVIPAGV   78 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-S-GGGHHHHHTT-CSEEEECCSC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-c-CCChHHHhCC-CCEEEECCCc
Confidence            79999999999999999999888  3688888876544322111111111111122 2 3456677888 9999999997


Q ss_pred             CCCCCC--cc--hhHH---HHHHHHHHHcCCCEEEEEc
Q 022495          146 QPGWDL--FA--PWKA---INLVEACRKRGVNRFILIS  176 (296)
Q Consensus       146 ~~~~~~--~~--~~~~---~~~l~~~~~~~~~~iV~~S  176 (296)
                      ......  .+  ..+.   +.+++.+.+.+.+-+|.+-
T Consensus        79 ~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv  116 (144)
T d1mlda1          79 PRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII  116 (144)
T ss_dssp             CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            543322  11  1111   8888888888755444443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.37  E-value=8.3e-07  Score=65.81  Aligned_cols=103  Identities=15%  Similarity=0.195  Sum_probs=65.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcc------cCCCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTL------SKDNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      +.|||.|+|+ |++|..++..|+.+|  .+|+++++++++.+...      ...........+|..+        +++ +
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~--------~~~-a   73 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSD--------CKD-A   73 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGG--------GTT-C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHH--------hcc-c
Confidence            3579999995 999999999999988  58999999876543111      0012233445555433        567 9


Q ss_pred             CEEEEcCCCCCCCC--Ccc--hhHH---HHHHHHHHHcCCCEEEEEcc
Q 022495          137 EAVVCATGFQPGWD--LFA--PWKA---INLVEACRKRGVNRFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~--~~~--~~~~---~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |+||.+||......  ..+  ..+.   +.+++.+.+.+.+-++.+-|
T Consensus        74 divvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          74 DLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             SEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99999999654321  111  1112   78888888887555555443

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=98.33  E-value=2.8e-06  Score=67.50  Aligned_cols=174  Identities=7%  Similarity=0.048  Sum_probs=97.9

Q ss_pred             cCCCCeEEEEcC----------------CchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC-Ch
Q 022495           63 SVKQKKIFVAGA----------------TGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE-GS  125 (296)
Q Consensus        63 ~~~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~  125 (296)
                      +|+|++||||+|                ||..|.+||+++..+|++|+++.-.....      ....+..+...-.+ ..
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~------~p~~~~~~~~~t~~~m~   76 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP------TPPFVKRVDVMTALEME   76 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC------CCTTEEEEECCSHHHHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC------cccccccceehhhHHHH
Confidence            577899999975                79999999999999999999987654321      22456665543221 12


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCCC-----CCCc---chh-----HH-----HHHHHHHHHcCCCEEEEEccceeccCccCc
Q 022495          126 AKLSEAIGDDSEAVVCATGFQPG-----WDLF---APW-----KA-----INLVEACRKRGVNRFILISSILVNGAAMGQ  187 (296)
Q Consensus       126 ~~~~~~~~~~~d~vv~~ag~~~~-----~~~~---~~~-----~~-----~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~  187 (296)
                      +.+.+.+.. .|++|++|++...     ....   ...     ..     ..+++...+....+.+.++-....+     
T Consensus        77 ~~~~~~~~~-~D~~i~aAAvsDf~~~~~~~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~k~~~~~~VGFaaEt~-----  150 (223)
T d1u7za_          77 AAVNASVQQ-QNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETN-----  150 (223)
T ss_dssp             HHHHHHGGG-CSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEEEESS-----
T ss_pred             HHHHhhhcc-ceeEeeeechhhhhhhhhhhhhcccccccccccceeeecCHHHHHHHHhhccCCceEEEEeeccc-----
Confidence            344455566 9999999986321     0000   000     00     4556655544333334444332111     


Q ss_pred             cCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcEEEEecC----cccCCCCCCceeecccCccccCCcCHHHHHHHHHHHh
Q 022495          188 ILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPG----GLRNEPPTGNIIMETEDTLYEGTISRDQVAEVAVEAL  263 (296)
Q Consensus       188 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~lrp~----~i~g~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l  263 (296)
                         .            .-+.+.++ +.+.+.++++...-    ..+|.......++........+..+-.++|+.++..+
T Consensus       151 ---~------------l~~~A~~K-l~~K~~D~IvAN~v~~~~~~fgsd~n~v~ii~~~~~~~~~~~sK~~iA~~Il~~I  214 (223)
T d1u7za_         151 ---N------------VEEYARQK-RIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEI  214 (223)
T ss_dssp             ---S------------HHHHHHHH-HHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEEEEEEEEEHHHHHHHHHHHH
T ss_pred             ---c------------hhhHHHHH-HHhcCCCEEEeecccCCCCCcCCCceEEEEEECCCeEEcCCCCHHHHHHHHHHHH
Confidence               0            01222233 55778998887742    2344333333334333222334567889999888765


Q ss_pred             c
Q 022495          264 L  264 (296)
Q Consensus       264 ~  264 (296)
                      .
T Consensus       215 ~  215 (223)
T d1u7za_         215 V  215 (223)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.30  E-value=5e-06  Score=56.46  Aligned_cols=90  Identities=14%  Similarity=0.273  Sum_probs=63.3

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh-hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK-TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++|+|+|.|. |..|..+++.|.++|++|++.+.+..... +.+   ...+.+..+...  .+.    +.+ +|.||.
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~---~~~~~~~~~~~~--~~~----~~~-~d~vi~   70 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL---PEAVERHTGSLN--DEW----LMA-ADLIVA   70 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS---CTTSCEEESBCC--HHH----HHH-CSEEEE
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH---hhccceeecccc--hhh----hcc-CCEEEE
Confidence            467999999997 88999999999999999999998665322 222   234455554432  222    345 899999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEE
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFI  173 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV  173 (296)
                      .-|+...         ..+++.+++.|+ .||
T Consensus        71 SPGi~~~---------~~~~~~a~~~gi-~ii   92 (93)
T d2jfga1          71 SPGIALA---------HPSLSAAADAGI-EIV   92 (93)
T ss_dssp             CTTSCTT---------SHHHHHHHHTTC-EEE
T ss_pred             CCCCCCC---------CHHHHHHHHcCC-CeE
Confidence            8887543         247788888886 443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.29  E-value=8.4e-06  Score=60.08  Aligned_cols=103  Identities=14%  Similarity=0.097  Sum_probs=64.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcch--hh----hcc---cCCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDK--AK----TTL---SKDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~----~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      |||.|+||+|.+|..++..|+.+|  .++++++++++.  .+    ++.   .....+++....--.|     .+.+++ 
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d-----~~~l~~-   74 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN-----LRIIDE-   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC-----GGGGTT-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch-----HHHhcc-
Confidence            589999999999999999999998  489988887532  11    111   1122233332221112     234667 


Q ss_pred             CCEEEEcCCCCCCCCCcch----hHH---HHHHHHHHHcCCCEEEEE
Q 022495          136 SEAVVCATGFQPGWDLFAP----WKA---INLVEACRKRGVNRFILI  175 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~~~----~~~---~~~l~~~~~~~~~~iV~~  175 (296)
                      +|+||.+||..........    .+.   +.+++...+.+-+.++.+
T Consensus        75 aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             ceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            9999999997654332211    111   777888877765555544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.26  E-value=1.2e-05  Score=56.71  Aligned_cols=97  Identities=15%  Similarity=0.246  Sum_probs=70.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++++|+|+|+|| |.+|..-++.|++.|++|++.+.........+. ...++++...+..+ .+     +.+ .+.|+.
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~d-----l~~-~~lv~~   78 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWA-NEGMLTLVEGPFDE-TL-----LDS-CWLAIA   78 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHH-TTTSCEEEESSCCG-GG-----GTT-CSEEEE
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHH-hcCCceeeccCCCH-HH-----hCC-CcEEee
Confidence            4678999999996 999999999999999999998876654332222 33578888877665 33     456 888887


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +.+        .......+.+.|++.++  +|++..
T Consensus        79 at~--------d~~~n~~i~~~a~~~~i--lVNv~D  104 (113)
T d1pjqa1          79 ATD--------DDTVNQRVSDAAESRRI--FCNVVD  104 (113)
T ss_dssp             CCS--------CHHHHHHHHHHHHHTTC--EEEETT
T ss_pred             cCC--------CHHHHHHHHHHHHHcCC--EEEeCC
Confidence            653        12222678888888874  787654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.24  E-value=4.3e-07  Score=70.62  Aligned_cols=40  Identities=28%  Similarity=0.458  Sum_probs=36.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT  106 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~  106 (296)
                      |||.|+||+|.+|+++++.|++.|++|++.+|++++.++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            5799999999999999999999999999999998876544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.23  E-value=9.5e-06  Score=60.09  Aligned_cols=102  Identities=20%  Similarity=0.198  Sum_probs=65.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcc-------cCCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTL-------SKDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      .++||.|+|+ |++|+.++..|+.+|.  ++++++++++++....       ......+.+...|..        .+.+ 
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~--------~l~d-   74 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD--------DCRD-   74 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG--------GTTT-
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH--------Hhcc-
Confidence            3679999997 9999999999999874  7999998876643211       001233444444433        3667 


Q ss_pred             CCEEEEcCCCCCCCCCc--c--hhHH---HHHHHHHHHcCCC-EEEEEc
Q 022495          136 SEAVVCATGFQPGWDLF--A--PWKA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~--~--~~~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      +|+||.++|........  +  ..+.   +.+++.+.+.+.+ .+|.+|
T Consensus        75 aDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          75 ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             ceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            99999999975533221  1  1111   7777777777643 455544

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.18  E-value=2.1e-06  Score=65.40  Aligned_cols=101  Identities=19%  Similarity=0.199  Sum_probs=64.7

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCC--CCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      .++++|+|+|.|+ |+.+++++..|.+.|.+|+++.|+.++..++.....  ..+..  .+..+ .+     ... +|+|
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~--~~~~~-~~-----~~~-~dli   83 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA--LSMDE-LE-----GHE-FDLI   83 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE--CCSGG-GT-----TCC-CSEE
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccc--ccccc-cc-----ccc-ccee
Confidence            4567899999996 999999999999999999999999987765432111  12222  22222 11     234 8999


Q ss_pred             EEcCCCC--CCCCCcchhHH---------------HHHHHHHHHcCCCEE
Q 022495          140 VCATGFQ--PGWDLFAPWKA---------------INLVEACRKRGVNRF  172 (296)
Q Consensus       140 v~~ag~~--~~~~~~~~~~~---------------~~~l~~~~~~~~~~i  172 (296)
                      ||+....  ...........               ..+++.|++.|.+.+
T Consensus        84 IN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~  133 (170)
T d1nyta1          84 INATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRN  133 (170)
T ss_dssp             EECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEE
T ss_pred             ecccccCcccCCCCCcHHHhccCcEEEEeecCCCCCHHHHHHHHcCCCcc
Confidence            9987432  11111100000               678888888886444

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.15  E-value=6e-06  Score=60.87  Aligned_cols=104  Identities=15%  Similarity=0.068  Sum_probs=61.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHH-CC--CeEEEEEcCcchhh---hcccCC-CCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLA-KG--FAVKAGVRDLDKAK---TTLSKD-NPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~-~g--~~V~~~~r~~~~~~---~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      |||.|+|++|.+|++++..|.. .+  .++++++..+....   ++.... ...... ...-.+     .+.+++ .|+|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~-~~~~~~-----~~~~~~-aDvv   73 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDA-----TPALEG-ADVV   73 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE-ECSSCC-----HHHHTT-CSEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE-EEcCCC-----ccccCC-CCEE
Confidence            6899999999999999988764 34  67888887543211   111101 111111 112222     235777 9999


Q ss_pred             EEcCCCCCCCCCc--ch--hHH---HHHHHHHHHcCCC-EEEEEcc
Q 022495          140 VCATGFQPGWDLF--AP--WKA---INLVEACRKRGVN-RFILISS  177 (296)
Q Consensus       140 v~~ag~~~~~~~~--~~--~~~---~~~l~~~~~~~~~-~iV~~SS  177 (296)
                      |.+||........  +-  .+.   +.+.+.+.+.+.+ .+|.+|.
T Consensus        74 vitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          74 LISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            9999975433221  11  111   7888888887644 4555543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.12  E-value=1.1e-05  Score=59.21  Aligned_cols=99  Identities=19%  Similarity=0.155  Sum_probs=64.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhccc------CCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLS------KDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      |||.|+|+ |.+|+.++..|+.+|  .++++++++++++.....      ...........|..        .+++ .|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~--------~~~~-adi   70 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYA--------DLKG-SDV   70 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGG--------GGTT-CSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHH--------HhcC-CCE
Confidence            58999996 999999999999887  579999988765442110      01233444444332        2677 999


Q ss_pred             EEEcCCCCCCCCCcchhH----H---HHHHHHHHHcCCCEEEEE
Q 022495          139 VVCATGFQPGWDLFAPWK----A---INLVEACRKRGVNRFILI  175 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~----~---~~~l~~~~~~~~~~iV~~  175 (296)
                      ||.+||............    .   +.+++.+.+.+.+-++.+
T Consensus        71 vvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv  114 (140)
T d1a5za1          71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV  114 (140)
T ss_dssp             EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence            999999765433221111    1   778888888765545544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=5.8e-06  Score=63.60  Aligned_cols=81  Identities=20%  Similarity=0.297  Sum_probs=61.8

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhccc-----CCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      .++++++|+|.|+ |+.|++++..|.+.|. ++++..|++++......     ...-.......|+.+ .+.+.+.+.. 
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-   90 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-QQAFAEALAS-   90 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHHHT-
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc-ccchhhhhcc-
Confidence            3567899999996 9999999999999985 68888998776543211     011234455788888 7888888888 


Q ss_pred             CCEEEEcCCC
Q 022495          136 SEAVVCATGF  145 (296)
Q Consensus       136 ~d~vv~~ag~  145 (296)
                      +|+|||+...
T Consensus        91 ~diiIN~Tp~  100 (182)
T d1vi2a1          91 ADILTNGTKV  100 (182)
T ss_dssp             CSEEEECSST
T ss_pred             cceeccccCC
Confidence            9999999753

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.09  E-value=5e-06  Score=63.95  Aligned_cols=107  Identities=11%  Similarity=0.060  Sum_probs=69.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~a  143 (296)
                      ++.+|||+||+|++|...++.....|++|+++++++++.+.... ......+..-|-.. .+.+.+...+ .+|+|+.+.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-~Ga~~vi~~~~~~~-~~~~~~~~~~~Gvd~v~D~v  106 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGFDAAFNYKTVNS-LEEALKKASPDGYDCYFDNV  106 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETTSCSC-HHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-hhhhhhcccccccH-HHHHHHHhhcCCCceeEEec
Confidence            37899999999999999999999999999999999877654432 22222222222222 3444444333 599999998


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAA  184 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~  184 (296)
                      |..         .....++.++..  ++++.++....|+..
T Consensus       107 G~~---------~~~~~~~~l~~~--G~~v~~G~~~~~~~~  136 (182)
T d1v3va2         107 GGE---------FLNTVLSQMKDF--GKIAICGAISVYNRM  136 (182)
T ss_dssp             CHH---------HHHHHGGGEEEE--EEEEECCCGGGTTCT
T ss_pred             Cch---------hhhhhhhhccCC--CeEEeecceeecccc
Confidence            721         113444444444  488888877666543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.04  E-value=5.2e-06  Score=63.18  Aligned_cols=96  Identities=21%  Similarity=0.225  Sum_probs=63.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+++|+|+||+|.+|...++.+...|++|+++++++++.+....   -+++.+ .|..+ .........+ +|+||.+.|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~---lGa~~~-i~~~~-~~~~~~~~~g-~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA---LGAEEA-ATYAE-VPERAKAWGG-LDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH---TTCSEE-EEGGG-HHHHHHHTTS-EEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc---ccccee-eehhh-hhhhhhcccc-ccccccccc
Confidence            47899999999999999999988899999999998876654432   122222 25444 3333334456 999999876


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .     ..     ...++.++..  +++|+++..
T Consensus       101 ~-----~~-----~~~~~~l~~~--G~~v~~G~~  122 (171)
T d1iz0a2         101 K-----EV-----EESLGLLAHG--GRLVYIGAA  122 (171)
T ss_dssp             T-----TH-----HHHHTTEEEE--EEEEEC---
T ss_pred             h-----hH-----HHHHHHHhcC--CcEEEEeCC
Confidence            1     11     2344544443  488887654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.03  E-value=2.6e-05  Score=58.26  Aligned_cols=102  Identities=19%  Similarity=0.147  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcc----c---CCCCCeEEEEcccCCChHHHHHHhcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTL----S---KDNPSLQIVKADVTEGSAKLSEAIGDD  135 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----~---~~~~~~~~~~~D~~d~~~~~~~~~~~~  135 (296)
                      +.+||.|+|+ |.+|..++..|+.+|.  ++++++++++......    .   ..........+|+.|        +++ 
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~--------~~~-   88 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV--------TAN-   88 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG--------GTT-
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh--------ccc-
Confidence            4679999996 9999999999999984  7998898876543211    0   011222222333333        567 


Q ss_pred             CCEEEEcCCCCCCCCCc--ch--hHH---HHHHHHHHHcCCC-EEEEEc
Q 022495          136 SEAVVCATGFQPGWDLF--AP--WKA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~--~~--~~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                      .|+||.+||........  ..  .+.   +.+++.+++.+.+ -+|.+|
T Consensus        89 adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          89 SKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999999975433211  11  111   7778888877644 455444

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.03  E-value=2.9e-06  Score=64.86  Aligned_cols=100  Identities=16%  Similarity=0.142  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~a  143 (296)
                      .+.+|||+||+|++|...++.+...|.+|++..+++++...... ...... +  |..+..+...+...+ .+|+||.+.
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-lGa~~v-i--~~~~~~~~~~~~~~~~gvD~vid~v  106 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGAKEV-L--AREDVMAERIRPLDKQRWAAAVDPV  106 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTCSEE-E--ECC---------CCSCCEEEEEECS
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-ccccee-e--ecchhHHHHHHHhhccCcCEEEEcC
Confidence            36799999999999999999888899999999999877654432 112221 1  322211122222332 599999998


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      |...         ....++.++..  +|+|.++...
T Consensus       107 gg~~---------~~~~l~~l~~~--Griv~~G~~~  131 (176)
T d1xa0a2         107 GGRT---------LATVLSRMRYG--GAVAVSGLTG  131 (176)
T ss_dssp             TTTT---------HHHHHHTEEEE--EEEEECSCCS
T ss_pred             Cchh---------HHHHHHHhCCC--ceEEEeeccc
Confidence            7321         13455555554  4899888764

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.00  E-value=1.9e-05  Score=57.92  Aligned_cols=100  Identities=13%  Similarity=0.033  Sum_probs=58.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhh----ccc--CCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKT----TLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +||.|+|+ |.+|..++..|+.+|.  ++++++++++....    +..  ........+.+|.        +.+++ .|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--------~~~~~-adi   71 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY--------SDVKD-CDV   71 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG--------GGGTT-CSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcH--------HHhCC-Cce
Confidence            47899997 9999999999999873  79999988765432    111  0112333332222        23677 999


Q ss_pred             EEEcCCCCCCCCCcchhH----H---HHHHHHHHHcCCCE-EEEEc
Q 022495          139 VVCATGFQPGWDLFAPWK----A---INLVEACRKRGVNR-FILIS  176 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~----~---~~~l~~~~~~~~~~-iV~~S  176 (296)
                      ||.+||............    .   +.+++.+.+.+.+- +|.+|
T Consensus        72 vvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          72 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             EEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            999999765332211111    1   78888888876444 44443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.00  E-value=1.5e-05  Score=60.38  Aligned_cols=100  Identities=17%  Similarity=0.188  Sum_probs=63.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC-ChHHHHHHh----cCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE-GSAKLSEAI----GDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~----~~~~d~v  139 (296)
                      .+.+|+|+| +|.+|...++.+...|.+|+++++++++.+.... ......+ ..|-.+ ..+.+.+.+    .+.+|+|
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~ga~~~~-~~~~~~~~~~~~~~~~~~~~g~g~D~v  102 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGADVTL-VVDPAKEEESSIIERIRSAIGDLPNVT  102 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEE-ECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cCCcEEE-eccccccccchhhhhhhcccccCCcee
Confidence            367999997 6999999999998899999999999887654332 1222222 223222 123333322    2249999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |.++|..        ......++.++..  +++++++.
T Consensus       103 id~~g~~--------~~~~~a~~~~~~~--G~iv~~G~  130 (170)
T d1e3ja2         103 IDCSGNE--------KCITIGINITRTG--GTLMLVGM  130 (170)
T ss_dssp             EECSCCH--------HHHHHHHHHSCTT--CEEEECSC
T ss_pred             eecCCCh--------HHHHHHHHHHhcC--CceEEEec
Confidence            9999842        1124455555544  48888774

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.00  E-value=2.9e-06  Score=63.81  Aligned_cols=73  Identities=27%  Similarity=0.393  Sum_probs=56.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ++++++|+|+|+ |.+|..+++.|..+|. ++++..|+.++..++....  +..+     .+ .+.+.+.+.+ +|+||.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~--~~~~-----~~-~~~~~~~l~~-~Divi~   90 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL--GGEA-----VR-FDELVDHLAR-SDVVVS   90 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH--TCEE-----CC-GGGHHHHHHT-CSEEEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh--hccc-----cc-chhHHHHhcc-CCEEEE
Confidence            578999999997 9999999999999997 6999999988776554311  1222     23 4457777888 999999


Q ss_pred             cCCC
Q 022495          142 ATGF  145 (296)
Q Consensus       142 ~ag~  145 (296)
                      +.+.
T Consensus        91 atss   94 (159)
T d1gpja2          91 ATAA   94 (159)
T ss_dssp             CCSS
T ss_pred             ecCC
Confidence            9874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=8.2e-06  Score=62.17  Aligned_cols=97  Identities=16%  Similarity=0.211  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH---HHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA---KLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~~~-~~d~vv  140 (296)
                      .+.+|||+||+|.+|...++.+...|++|+++++++++.+....   -+++.+ .|.++ .+   .+.+...+ .+|+++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~---~Ga~~v-i~~~~-~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ---NGAHEV-FNHRE-VNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCSEE-EETTS-TTHHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccccc---cCcccc-ccccc-ccHHHHhhhhhccCCceEEe
Confidence            37899999999999999999998999999999998876554332   122222 36665 33   33444444 599999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      .+.|.         ......++.++..  +++|.++.
T Consensus       103 d~~g~---------~~~~~~~~~l~~~--G~iv~~G~  128 (174)
T d1yb5a2         103 EMLAN---------VNLSKDLSLLSHG--GRVIVVGS  128 (174)
T ss_dssp             ESCHH---------HHHHHHHHHEEEE--EEEEECCC
T ss_pred             ecccH---------HHHHHHHhccCCC--CEEEEEec
Confidence            98762         1124455655554  48888764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.96  E-value=4.9e-05  Score=56.29  Aligned_cols=43  Identities=21%  Similarity=0.249  Sum_probs=38.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT  106 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~  106 (296)
                      ..+++|.|+||.|.+|+.+++.|.++|++|.+.+|+.....+.
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~   49 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAES   49 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHH
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccch
Confidence            3578999999999999999999999999999999988665543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.95  E-value=6.2e-05  Score=55.13  Aligned_cols=100  Identities=15%  Similarity=0.093  Sum_probs=62.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhccc---C----CCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTLS---K----DNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~---~----~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      |||.|+|| |.+|+.++..|+..|  .+++++++++++......   .    ......+...  .| .    +.+++ +|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~-~----~~~~d-ad   71 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND-Y----ADTAN-SD   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC-G----GGGTT-CS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC-H----HHhcC-Ce
Confidence            57999996 999999999999987  589999988866442110   0    1122333321  22 1    23567 99


Q ss_pred             EEEEcCCCCCCCCCcchhHH-------HHHHHHHHHcCCCEEEEE
Q 022495          138 AVVCATGFQPGWDLFAPWKA-------INLVEACRKRGVNRFILI  175 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~-------~~~l~~~~~~~~~~iV~~  175 (296)
                      +||.+||.............       +.+++.+.+.+.+-++.+
T Consensus        72 vvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          72 IVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             EEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            99999997554322211111       777777777764444443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.95  E-value=4.8e-05  Score=55.58  Aligned_cols=99  Identities=14%  Similarity=0.103  Sum_probs=62.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCc--chhh----hccc--CCCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDL--DKAK----TTLS--KDNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~----~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      ||.|+||+|.+|+.++..|+.+|.  ++++++++.  +...    ++..  ...........|..|        +++ .|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~--------~~~-aD   72 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYED--------TAG-SD   72 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGG--------GTT-CS
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHH--------hhh-cC
Confidence            799999999999999999999983  677777542  2221    1110  122344444444333        467 99


Q ss_pred             EEEEcCCCCCCCCCcchhHH--------HHHHHHHHHcCCC-EEEEEc
Q 022495          138 AVVCATGFQPGWDLFAPWKA--------INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~--------~~~l~~~~~~~~~-~iV~~S  176 (296)
                      +||.+||....... .....        +.+++...+.+.+ .++.+|
T Consensus        73 iVvitaG~~~~~g~-~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          73 VVVITAGIPRQPGQ-TRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EEEECCCCCCCTTC-CHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEEecccccccCC-chhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            99999997554332 21111        7888888887644 444443

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.91  E-value=7.5e-06  Score=62.25  Aligned_cols=74  Identities=20%  Similarity=0.252  Sum_probs=53.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC--CCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK--DNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ..+++++|+|.|+ |+.+++++..|.+.+.+|+++.|+.++...+...  ...++..+..|-.+        +.. +|+|
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~--------~~~-~dii   83 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP--------LQT-YDLV   83 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC--------CSC-CSEE
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcccc--------ccc-ccee
Confidence            3557899999985 9999999999999888999999998876654321  11233444433222        345 9999


Q ss_pred             EEcCCC
Q 022495          140 VCATGF  145 (296)
Q Consensus       140 v~~ag~  145 (296)
                      |++...
T Consensus        84 IN~tp~   89 (171)
T d1p77a1          84 INATSA   89 (171)
T ss_dssp             EECCCC
T ss_pred             eecccc
Confidence            999764

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.91  E-value=2e-05  Score=60.21  Aligned_cols=99  Identities=17%  Similarity=0.221  Sum_probs=62.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-----CCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      |+|.|+|+ |.+|..++..|.++|++|++++|++++.......     ..+........... ..+..+.+++ +|+||.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~-aD~iii   78 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLL-TSDIGLAVKD-ADVILI   78 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEE-ESCHHHHHTT-CSEEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhh-hhhhHhHhcC-CCEEEE
Confidence            79999997 9999999999999999999999998766543310     01111111111111 1236677888 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHc-CCCEEEEEcc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKR-GVNRFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~~SS  177 (296)
                      +...         .....+++.++.. ..+.+|.+++
T Consensus        79 ~v~~---------~~~~~~~~~i~~~l~~~~~iv~~~  106 (184)
T d1bg6a2          79 VVPA---------IHHASIAANIASYISEGQLIILNP  106 (184)
T ss_dssp             CSCG---------GGHHHHHHHHGGGCCTTCEEEESS
T ss_pred             EEch---------hHHHHHHHHhhhccCCCCEEEEeC
Confidence            7531         1224566665544 2234554443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.91  E-value=5.7e-05  Score=55.27  Aligned_cols=101  Identities=19%  Similarity=0.085  Sum_probs=63.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcc-------cCCCCCeEEEE-cccCCChHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTL-------SKDNPSLQIVK-ADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~-~D~~d~~~~~~~~~~~~~  136 (296)
                      |||.|+|+ |.+|..++..|+.+|  .++++++++++......       ........... .|+.        .+++ .
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~--------~~~~-a   70 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS--------LLKG-S   70 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG--------GGTT-C
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH--------Hhcc-c
Confidence            68999996 999999999999887  46999998876643211       00111222222 2332        3677 9


Q ss_pred             CEEEEcCCCCCCCCCcchhHH-------HHHHHHHHHcCCCEEEEEcc
Q 022495          137 EAVVCATGFQPGWDLFAPWKA-------INLVEACRKRGVNRFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~~~-------~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |+||..||.............       +.+.+.+++.+.+-++.+-|
T Consensus        71 diVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          71 EIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             SEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             cEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            999999996554332211111       77777777776444544443

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.90  E-value=1.2e-05  Score=61.73  Aligned_cols=100  Identities=16%  Similarity=0.108  Sum_probs=67.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcC-CCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~-~~d~vv~~  142 (296)
                      +.+|||+||+|.+|...++.+...|.+|+++++++++.+.... .  ++..+ .|..++  .+.+.+...+ .+|++|.+
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~-~--Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~  101 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-L--GVEYV-GDSRSVDFADEILELTDGYGVDVVLNS  101 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-T--CCSEE-EETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeeccccccccccc-c--ccccc-ccCCccCHHHHHHHHhCCCCEEEEEec
Confidence            6899999999999999999998899999999998876654332 2  22222 344551  2344444333 59999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcccee
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILV  180 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~  180 (296)
                      .|.         .....+++.++..  +++|.++....
T Consensus       102 ~g~---------~~~~~~~~~l~~~--G~~v~~G~~~~  128 (183)
T d1pqwa_         102 LAG---------EAIQRGVQILAPG--GRFIELGKKDV  128 (183)
T ss_dssp             CCT---------HHHHHHHHTEEEE--EEEEECSCGGG
T ss_pred             ccc---------hHHHHHHHHhcCC--CEEEEEccCCC
Confidence            872         1113455555544  48998876543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.89  E-value=4.7e-05  Score=55.97  Aligned_cols=99  Identities=20%  Similarity=0.253  Sum_probs=62.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcchhhhcc-------cCCCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLDKAKTTL-------SKDNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      |||.|+|+ |.+|+.++..|+.+|  .++++.++++++.....       ............|..+        +++ .|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~--------l~~-ad   71 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAA--------LAD-AD   71 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGG--------GTT-CS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHH--------hcc-cc
Confidence            68999995 999999999999987  47888888876543211       1112233444444333        567 99


Q ss_pred             EEEEcCCCCCC------CCCcc--hhHH---HHHHHHHHHcCCCEEEEE
Q 022495          138 AVVCATGFQPG------WDLFA--PWKA---INLVEACRKRGVNRFILI  175 (296)
Q Consensus       138 ~vv~~ag~~~~------~~~~~--~~~~---~~~l~~~~~~~~~~iV~~  175 (296)
                      +||.+||....      ....+  ..+.   +.+++.+++.+.+-++.+
T Consensus        72 iVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiviv  120 (146)
T d1hyha1          72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV  120 (146)
T ss_dssp             EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             EEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence            99999996431      11111  1122   778888888764444443

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=5.8e-05  Score=55.42  Aligned_cols=87  Identities=10%  Similarity=0.044  Sum_probs=52.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC----CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG----FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ||+|.|.||||++|+.+++.|+++.    .+++++..+......... ....  ....++.+ .+    .+.+ +|++|.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~-~~~~--~~~~~~~~-~~----~~~~-~DivF~   71 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSF-GGTT--GTLQDAFD-LE----ALKA-LDIIVT   71 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGG-GTCC--CBCEETTC-HH----HHHT-CSEEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccc-cCCc--eeeecccc-hh----hhhc-CcEEEE
Confidence            4689999999999999999888753    356666655432211110 0111  11223333 22    3566 999999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCC
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVN  170 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~  170 (296)
                      +++-         ...+.+.+.+.+.|.+
T Consensus        72 a~~~---------~~s~~~~~~~~~~g~~   91 (146)
T d1t4ba1          72 CQGG---------DYTNEIYPKLRESGWQ   91 (146)
T ss_dssp             CSCH---------HHHHHHHHHHHHTTCC
T ss_pred             ecCc---------hHHHHhhHHHHhcCCC
Confidence            9852         1126677777788763

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.86  E-value=3.3e-05  Score=57.39  Aligned_cols=75  Identities=17%  Similarity=0.218  Sum_probs=59.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc-CCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS-KDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~ag  144 (296)
                      -+|+|.|. |-+|..+++.|.++|++|++++.++++..+... ....++.++.+|.+| ++.++++ ++. +|++|.+.+
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d-~~~L~~a~i~~-a~~vi~~~~   80 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSND-SSVLKKAGIDR-CRAILALSD   80 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS-HHHHHHHTTTT-CSEEEECSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcc-hHHHHHhcccc-CCEEEEccc
Confidence            37899986 999999999999999999999998865332221 123689999999999 8888776 444 999998764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.85  E-value=8.7e-05  Score=54.28  Aligned_cols=99  Identities=17%  Similarity=0.196  Sum_probs=61.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhc---cc---CCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTT---LS---KDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~---~~---~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ||.|+|+ |.+|++++..|+.+|.  +++++++++++.+..   +.   .......+...+  |     .+.+++ .|+|
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~-----~~~~~d-aDvV   73 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--D-----PEICRD-ADMV   73 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--C-----GGGGTT-CSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--C-----HHHhhC-CcEE
Confidence            7899996 9999999999999984  799999888664421   10   011223332221  1     123567 9999


Q ss_pred             EEcCCCCCCCCCcchhHH-------HHHHHHHHHcCCCEEEEE
Q 022495          140 VCATGFQPGWDLFAPWKA-------INLVEACRKRGVNRFILI  175 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~-------~~~l~~~~~~~~~~iV~~  175 (296)
                      |.+||.............       +.+++.+.+.+.+-++.+
T Consensus        74 VitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv  116 (143)
T d1llda1          74 VITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML  116 (143)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            999997654322211111       777777777765444433

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.84  E-value=4.1e-05  Score=57.81  Aligned_cols=99  Identities=16%  Similarity=0.065  Sum_probs=62.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+.+|+|+|+ |.+|...++.+...|.+|+++++++++.+....   -+++.+. |..+..+..+...++ +|.++.+.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~---lGa~~~i-~~~~~~~~~~~~~~~-~d~vi~~~~  100 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK---MGADHYI-ATLEEGDWGEKYFDT-FDLIVVCAS  100 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH---HTCSEEE-EGGGTSCHHHHSCSC-EEEEEECCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc---cCCcEEe-eccchHHHHHhhhcc-cceEEEEec
Confidence            3789999986 999999998888889999999999887664332   1222222 332213444444555 999999877


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ........      ..++.++..  +++++++-
T Consensus       101 ~~~~~~~~------~~~~~l~~~--G~iv~~G~  125 (168)
T d1piwa2         101 SLTDIDFN------IMPKAMKVG--GRIVSISI  125 (168)
T ss_dssp             CSTTCCTT------TGGGGEEEE--EEEEECCC
T ss_pred             CCccchHH------HHHHHhhcc--ceEEEecc
Confidence            54332211      123334443  37777753

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=1.5e-05  Score=59.93  Aligned_cols=70  Identities=17%  Similarity=0.196  Sum_probs=47.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCC-CCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKD-NPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |||+|+|+ |.+|..++..|.+.|++|.+++|++.......... ............+ .    +.... +|+||.+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~-~D~iii~v   71 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-P----DFLAT-SDLLLVTL   71 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-H----HHHHT-CSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccch-h----hhhcc-cceEEEee
Confidence            68999997 99999999999999999999999987554322111 1111111111122 2    23455 99999886

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.84  E-value=3e-05  Score=57.66  Aligned_cols=105  Identities=12%  Similarity=0.117  Sum_probs=64.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccC-------CCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSK-------DNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      +.+||.|+|+ |.+|+.++..|...+ .++++++.+++.+......       ........ +     ....++++++ .
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~-----~~~~~~~~~~-a   77 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-A-----EYSYEAALTG-A   77 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-E-----ECSHHHHHTT-C
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-c-----cCchhhhhcC-C
Confidence            4679999997 999999999888888 5899888887654422110       01111111 1     1123456777 9


Q ss_pred             CEEEEcCCCCCCCC-------Ccch--hHH---HHHHHHHHHcCCCEEEEEcc
Q 022495          137 EAVVCATGFQPGWD-------LFAP--WKA---INLVEACRKRGVNRFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~-------~~~~--~~~---~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |+||.++|......       ....  .+.   +.+++.+.+.+.+-++.+-|
T Consensus        78 diVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          78 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999998654321       1111  111   77888888777555555443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.84  E-value=1e-05  Score=63.31  Aligned_cols=76  Identities=21%  Similarity=0.222  Sum_probs=51.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC------------ChHHHHHHhcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE------------GSAKLSEAIGD  134 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d------------~~~~~~~~~~~  134 (296)
                      |+|.|.| .|++|..++..|++.|++|++++.++++...+....   ..+.+-++.+            ...++.+++..
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~---~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~   76 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGK---SPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLD   76 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC---CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHT
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccC---CcccchhhhhhhhhhhcccccccCCCHHHHHhh
Confidence            6799997 699999999999999999999999887766544311   1111111100            01234555666


Q ss_pred             CCCEEEEcCCCCC
Q 022495          135 DSEAVVCATGFQP  147 (296)
Q Consensus       135 ~~d~vv~~ag~~~  147 (296)
                       +|+++.|.+...
T Consensus        77 -~d~i~i~VpTP~   88 (202)
T d1mv8a2          77 -SDVSFICVGTPS   88 (202)
T ss_dssp             -CSEEEECCCCCB
T ss_pred             -CCEEEEecCccc
Confidence             999999988643

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=3.4e-05  Score=57.58  Aligned_cols=103  Identities=17%  Similarity=0.196  Sum_probs=63.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhc----cc---CCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTT----LS---KDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~---~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      ++..||.|+|+ |.+|..++..|+.+|.  ++++++++++.+...    ..   ...........|..+        +++
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~--------~~~   87 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV--------SAN   87 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG--------GTT
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh--------hcc
Confidence            34568999996 9999999999999874  799989887654321    10   011222223334332        466


Q ss_pred             CCCEEEEcCCCCCCCC--C--cchhHH---HHHHHHHHHcCCC-EEEEEc
Q 022495          135 DSEAVVCATGFQPGWD--L--FAPWKA---INLVEACRKRGVN-RFILIS  176 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~--~--~~~~~~---~~~l~~~~~~~~~-~iV~~S  176 (296)
                       .|+||.+||......  .  ....+.   +.+++.+.+.+.+ .++.+|
T Consensus        88 -adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          88 -SKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             -EEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             -ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence             999999999754322  1  112222   6666666666644 444444

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.76  E-value=1.9e-05  Score=60.25  Aligned_cols=98  Identities=17%  Similarity=0.195  Sum_probs=65.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChH---HHHHHhcC-CCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSA---KLSEAIGD-DSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~~~-~~d~vv~  141 (296)
                      +++|+|+||+|.+|..+++.+...|.+|+++++++++.+....   -+.+.+ .|.++ .+   .+.+.-++ .+|+|+.
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~---lGa~~v-i~~~~-~d~~~~v~~~t~g~g~d~v~d  103 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK---AGAWQV-INYRE-EDLVERLKEITGGKKVRVVYD  103 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH---HTCSEE-EETTT-SCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh---cCCeEE-EECCC-CCHHHHHHHHhCCCCeEEEEe
Confidence            6899999999999999999988899999999999987765432   122222 36665 33   34443333 5899999


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +.|..         .....++.++..  ++++..+...
T Consensus       104 ~~g~~---------~~~~~~~~l~~~--G~~v~~g~~~  130 (179)
T d1qora2         104 SVGRD---------TWERSLDCLQRR--GLMVSFGNSS  130 (179)
T ss_dssp             CSCGG---------GHHHHHHTEEEE--EEEEECCCTT
T ss_pred             CccHH---------HHHHHHHHHhcC--Ceeeeccccc
Confidence            88631         113344444444  3787766553

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.75  E-value=6.1e-05  Score=55.12  Aligned_cols=99  Identities=16%  Similarity=0.113  Sum_probs=59.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccC-------CCCCeEEE-EcccCCChHHHHHHhcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSK-------DNPSLQIV-KADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-------~~~~~~~~-~~D~~d~~~~~~~~~~~~~d  137 (296)
                      +||.|+|+ |.+|..++..|+.++ .++++++++++........       ......+. ..|..+        +.+ .|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------~~~-ad   71 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------TAN-SD   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------GTT-CS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------hcC-CC
Confidence            58999996 999999999999887 5888888887654321100       01122222 233332        456 99


Q ss_pred             EEEEcCCCCCCCC--Ccc--hhHH---HHHHHHHHHcCCCEEEEE
Q 022495          138 AVVCATGFQPGWD--LFA--PWKA---INLVEACRKRGVNRFILI  175 (296)
Q Consensus       138 ~vv~~ag~~~~~~--~~~--~~~~---~~~l~~~~~~~~~~iV~~  175 (296)
                      +||.+||......  ..+  ..+.   +.+++...+.+.+-++.+
T Consensus        72 vvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          72 VIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             EEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             EEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence            9999999754321  111  1222   788888888764444444

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.75  E-value=1.2e-05  Score=59.92  Aligned_cols=104  Identities=12%  Similarity=0.058  Sum_probs=58.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC----e---EEEEEc--Ccchhhhc----ccCCCCCeEEEEcccCCChHHHHHHhc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF----A---VKAGVR--DLDKAKTT----LSKDNPSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~----~---V~~~~r--~~~~~~~~----~~~~~~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      +||.|+||+|++|++++..|+..+.    +   ..++..  ..+.....    ..........+...-     ...+.++
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~   79 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATD-----DPKVAFK   79 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES-----CHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCC-----chhhhcc
Confidence            5999999999999999999998652    1   122111  11222111    111122333333322     2356678


Q ss_pred             CCCCEEEEcCCCCCCCCCcchh----HH---HHHHHHHHHcC-C-CEEEEEc
Q 022495          134 DDSEAVVCATGFQPGWDLFAPW----KA---INLVEACRKRG-V-NRFILIS  176 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~~~~~----~~---~~~l~~~~~~~-~-~~iV~~S  176 (296)
                      + .|+||.++|...........    +.   +.+.+...+.. . ..++.+|
T Consensus        80 ~-advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          80 D-ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             T-CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             c-ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            8 99999999976543322111    11   77777777753 2 2454454

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=2.1e-05  Score=51.01  Aligned_cols=40  Identities=28%  Similarity=0.355  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK  104 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~  104 (296)
                      ++++|+|+||+|++|...++.+...|++|+++.+++++.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~   70 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence            3679999999999999999988889999999999987754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=0.00014  Score=50.68  Aligned_cols=87  Identities=15%  Similarity=0.223  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag  144 (296)
                      ..||.|.|| |.+|+-++....+.|++|++++.+++......     .-.++.+|..| .+.+.+.... .+|+|..-- 
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-----a~~~i~~~~~d-~~~l~~~~~~~~~DviT~E~-   82 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV-----AHRSHVINMLD-GDALRRVVELEKPHYIVPEI-   82 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-----SSEEEECCTTC-HHHHHHHHHHHCCSEEEECS-
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-----CCeEEECCCCC-HHHHHHHHHhhCCceEEEEe-
Confidence            568999995 99999999999999999999998876433222     23678899999 8888876642 379886421 


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                           +...    ...++.+.+.++
T Consensus        83 -----EnI~----~~~L~~le~~g~   98 (111)
T d1kjqa2          83 -----EAIA----TDMLIQLEEEGL   98 (111)
T ss_dssp             -----SCSC----HHHHHHHHHTTC
T ss_pred             -----cCcC----HHHHHHHHHCCC
Confidence                 1111    356666666653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=0.00016  Score=54.53  Aligned_cols=97  Identities=16%  Similarity=0.196  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeE-EEEcccCCChHHHHHHh----cCCCCEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQ-IVKADVTEGSAKLSEAI----GDDSEAV  139 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~----~~~~d~v  139 (296)
                      +.+|+|+|+ |.+|...++.+...|. +|++.++++++.+....   -+.+ ++..+-.+ .....+.+    ...+|++
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~---~Ga~~~~~~~~~~-~~~~~~~~~~~~g~g~Dvv  101 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE---IGADLVLQISKES-PQEIARKVEGQLGCKPEVT  101 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH---TTCSEEEECSSCC-HHHHHHHHHHHHTSCCSEE
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH---hCCcccccccccc-cccccccccccCCCCceEE
Confidence            679999986 9999999999999998 79999999887664332   1232 22233333 33333332    2149999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |.++|..        ......++.++..  +++++++.
T Consensus       102 id~~G~~--------~~~~~a~~~~~~g--G~iv~~G~  129 (171)
T d1pl8a2         102 IECTGAE--------ASIQAGIYATRSG--GTLVLVGL  129 (171)
T ss_dssp             EECSCCH--------HHHHHHHHHSCTT--CEEEECSC
T ss_pred             EeccCCc--------hhHHHHHHHhcCC--CEEEEEec
Confidence            9999842        1113344444443  48888774

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.64  E-value=5.6e-05  Score=57.77  Aligned_cols=98  Identities=15%  Similarity=0.107  Sum_probs=62.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCCC-h-H---HHHHHhcC-CCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG-S-A---KLSEAIGD-DSE  137 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~-~---~~~~~~~~-~~d  137 (296)
                      .+.+|+|+|+ |.+|...++.+...|+ +|+++++++++.+.... .  +.+.+ .|..+. . +   .+.+...+ .+|
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~-l--Ga~~v-i~~~~~~~~~~~~~i~~~~~~~g~D  102 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-I--GADLT-LNRRETSVEERRKAIMDITHGRGAD  102 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-T--TCSEE-EETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccccc-c--cceEE-EeccccchHHHHHHHHHhhCCCCce
Confidence            3789999996 9999999999999997 79999999887654332 1  22221 234331 1 1   23333322 499


Q ss_pred             EEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          138 AVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       138 ~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +||.++|...        .....++.++..  +++++++-
T Consensus       103 vvid~vG~~~--------~~~~a~~~l~~~--G~iv~~G~  132 (182)
T d1vj0a2         103 FILEATGDSR--------ALLEGSELLRRG--GFYSVAGV  132 (182)
T ss_dssp             EEEECSSCTT--------HHHHHHHHEEEE--EEEEECCC
T ss_pred             EEeecCCchh--------HHHHHHHHhcCC--CEEEEEee
Confidence            9999987522        113445555544  48888763

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.62  E-value=1.1e-05  Score=61.08  Aligned_cols=100  Identities=20%  Similarity=0.203  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +.+|||+||+|++|...++.....|++|+++.+++++.+.... ......+..-|..+  +.+...-++.+|+||.+.|-
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-lGad~vi~~~~~~~--~~~~~~~~~gvd~vid~vgg  100 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LGASEVISREDVYD--GTLKALSKQQWQGAVDPVGG  100 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HTCSEEEEHHHHCS--SCCCSSCCCCEEEEEESCCT
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-hcccceEeccchhc--hhhhcccCCCceEEEecCcH
Confidence            5689999999999999998888889999999999887665432 11222111112111  11111111159999998763


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      .         .....++.++..  +++|.++...
T Consensus       101 ~---------~~~~~~~~l~~~--G~iv~~G~~~  123 (167)
T d1tt7a2         101 K---------QLASLLSKIQYG--GSVAVSGLTG  123 (167)
T ss_dssp             H---------HHHHHHTTEEEE--EEEEECCCSS
T ss_pred             H---------HHHHHHHHhccC--ceEEEeeccC
Confidence            1         113344444333  4888877664

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.61  E-value=0.00011  Score=55.01  Aligned_cols=65  Identities=15%  Similarity=0.173  Sum_probs=46.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |+|.|+|. |.+|..+++.|.+.|++|++.+|+++..+.... . ..+...    .+    ..+.+++ +|+||-+.
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~-~-~~~~~~----~~----~~~~~~~-~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-R-QLVDEA----GQ----DLSLLQT-AKIIFLCT   65 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T-TSCSEE----ES----CGGGGTT-CSEEEECS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH-h-hcccee----ee----ecccccc-cccccccC
Confidence            57999985 999999999999999999999999876654332 1 111111    11    1134566 99999765

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.59  E-value=0.00062  Score=51.34  Aligned_cols=104  Identities=14%  Similarity=0.046  Sum_probs=59.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC---C----eEEEEEcCcchh--hh----cccCCCCCeEEEEcccCCChHHHHHHhc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG---F----AVKAGVRDLDKA--KT----TLSKDNPSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g---~----~V~~~~r~~~~~--~~----~~~~~~~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      .+|.||||+|+||++++-.|++.+   .    .+++++.+....  ..    +..........+..  +   ....+.++
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~--~---~~~~~~~~   99 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--G---IDPYEVFE   99 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--E---SCHHHHTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc--c---ccchhhcc
Confidence            489999999999999999998743   1    345555444221  11    11111122222221  1   12456688


Q ss_pred             CCCCEEEEcCCCCCCCCCcchhHH-------HHHHHHHHHcCC--CEEEEEc
Q 022495          134 DDSEAVVCATGFQPGWDLFAPWKA-------INLVEACRKRGV--NRFILIS  176 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~~~~~~~-------~~~l~~~~~~~~--~~iV~~S  176 (296)
                      + .|+||..+|.............       +.+.+++.+...  .+++.+|
T Consensus       100 ~-aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         100 D-VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             T-CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             C-CceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            8 9999999997654332221111       778888877532  2455554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=1.8e-05  Score=60.35  Aligned_cols=97  Identities=18%  Similarity=0.072  Sum_probs=63.1

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATG  144 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag  144 (296)
                      +.+|||+||+|++|...++.....|++|+++++++++......   .+.+.+ .|..+ .+. .+.+.. ..|.+|.+.|
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~---lGad~v-i~~~~-~~~-~~~l~~~~~~~vvD~Vg  105 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS---LGASRV-LPRDE-FAE-SRPLEKQVWAGAIDTVG  105 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH---HTEEEE-EEGGG-SSS-CCSSCCCCEEEEEESSC
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh---hccccc-ccccc-HHH-HHHHHhhcCCeeEEEcc
Confidence            4589999999999999999888899999999999887654432   233333 23333 221 222222 4788998876


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      -         ......++.++..  +++|.++...
T Consensus       106 g---------~~~~~~l~~l~~~--Griv~~G~~~  129 (177)
T d1o89a2         106 D---------KVLAKVLAQMNYG--GCVAACGLAG  129 (177)
T ss_dssp             H---------HHHHHHHHTEEEE--EEEEECCCTT
T ss_pred             h---------HHHHHHHHHhccc--cceEeecccC
Confidence            2         1113444444443  4899887764

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.56  E-value=5.3e-05  Score=57.12  Aligned_cols=42  Identities=26%  Similarity=0.447  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTL  107 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~  107 (296)
                      ++++|+|.|+ |+.|++++..|.+.|. +|.++.|++++...+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~   58 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLA   58 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHH
Confidence            4789999996 9999999999999995 7999999988766543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=8.9e-05  Score=55.82  Aligned_cols=95  Identities=13%  Similarity=0.128  Sum_probs=63.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      +.+|+|.|+ |.+|...++.+...|++++++++++++.+....   -+.+. ..|..+ .+......++ +|++|.+.|.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~---lGad~-~i~~~~-~~~~~~~~~~-~D~vid~~g~  103 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA---LGADE-VVNSRN-ADEMAAHLKS-FDFILNTVAA  103 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---HTCSE-EEETTC-HHHHHTTTTC-EEEEEECCSS
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhc---cCCcE-EEECch-hhHHHHhcCC-Cceeeeeeec
Confidence            789999986 999999999888899999999998876543221   12222 246666 5655555666 9999999874


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ....        ...++.++..  ++++.++.
T Consensus       104 ~~~~--------~~~~~~l~~~--G~iv~~G~  125 (168)
T d1uufa2         104 PHNL--------DDFTTLLKRD--GTMTLVGA  125 (168)
T ss_dssp             CCCH--------HHHHTTEEEE--EEEEECCC
T ss_pred             chhH--------HHHHHHHhcC--CEEEEecc
Confidence            3211        2333433333  47887764

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.53  E-value=5.9e-05  Score=57.26  Aligned_cols=97  Identities=11%  Similarity=0.042  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCe-EEEEcccCC--ChHHHHHHhcC-CCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSL-QIVKADVTE--GSAKLSEAIGD-DSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~D~~d--~~~~~~~~~~~-~~d~v  139 (296)
                      .+.+|+|.|+ |++|...++.+...|+ +|+++++++++.+....   -++ +++  |..+  ..+.+.+...+ .+|++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~---lGa~~~i--~~~~~~~~~~v~~~t~g~G~D~v  100 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF---YGATDIL--NYKNGHIEDQVMKLTNGKGVDRV  100 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH---HTCSEEE--CGGGSCHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh---hCccccc--cccchhHHHHHHHHhhccCcceE
Confidence            3679999986 9999999999888896 68998988876553321   122 222  3333  13445555443 49999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |.|+|...        .....++.++..  +++++++-
T Consensus       101 id~~g~~~--------~~~~a~~~~~~~--G~iv~~G~  128 (174)
T d1jqba2         101 IMAGGGSE--------TLSQAVKMVKPG--GIISNINY  128 (174)
T ss_dssp             EECSSCTT--------HHHHHHHHEEEE--EEEEECCC
T ss_pred             EEccCCHH--------HHHHHHHHHhcC--CEEEEEee
Confidence            99998431        113445555544  47888763

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.50  E-value=0.00063  Score=49.63  Aligned_cols=94  Identities=14%  Similarity=0.093  Sum_probs=54.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC----CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG----FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      |||.|.||||++|+.+++.|+++.    .++..+..+...-+ ... ..... ....+..|     .+.+++ +|++|.|
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk-~~~-~~~~~-~~~~~~~~-----~~~~~~-~DvvF~a   71 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP-APN-FGKDA-GMLHDAFD-----IESLKQ-LDAVITC   71 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB-CCC-SSSCC-CBCEETTC-----HHHHTT-CSEEEEC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc-ccc-cCCcc-eeeecccc-----hhhhcc-ccEEEEe
Confidence            579999999999999999988743    35555443322111 110 00111 01112222     233566 9999998


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCC-EEEEEccc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVN-RFILISSI  178 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~-~iV~~SS~  178 (296)
                      .+-         .....+.+.+.+.|.+ .+|=.|+.
T Consensus        72 lp~---------~~s~~~~~~l~~~g~~~~VIDlSsd   99 (147)
T d1mb4a1          72 QGG---------SYTEKVYPALRQAGWKGYWIDAAST   99 (147)
T ss_dssp             SCH---------HHHHHHHHHHHHTTCCSEEEESSST
T ss_pred             cCc---------hHHHHHhHHHHHcCCceEEEeCCcc
Confidence            741         1126677888888864 45556665

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.49  E-value=0.00012  Score=52.45  Aligned_cols=69  Identities=22%  Similarity=0.304  Sum_probs=55.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH-hcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA-IGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~~~d~vv~~a  143 (296)
                      |+++|.|. |-+|..+++.|  +|.+|++++.+++.......   .++.++.+|.+| .+.++++ +.. ++.+|.+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~---~~~~~i~Gd~~~-~~~L~~a~i~~-A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR---SGANFVHGDPTR-VSDLEKANVRG-ARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH---TTCEEEESCTTS-HHHHHHTTCTT-CSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh---cCccccccccCC-HHHHHHhhhhc-CcEEEEec
Confidence            57899985 89999999998  46678888988887665443   578999999999 8888875 444 89999765

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.48  E-value=0.00088  Score=49.12  Aligned_cols=101  Identities=16%  Similarity=0.212  Sum_probs=61.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhccc---C----CCCCeEEEEcccCCChHHHHHHhcCCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLS---K----DNPSLQIVKADVTEGSAKLSEAIGDDSE  137 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~---~----~~~~~~~~~~D~~d~~~~~~~~~~~~~d  137 (296)
                      ..||.|+|+ |.+|+.++..|..++ .++++++++++.......   .    ......+...|  +     .+.+++ .|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~-----~~~~~~-ad   73 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T-----YDDLAG-AD   73 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C-----GGGGTT-CS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c-----ccccCC-Cc
Confidence            358999995 999999998888877 578888988765442210   0    11222333222  1     123566 99


Q ss_pred             EEEEcCCCCCCCC-------Ccc--hhHH---HHHHHHHHHcCCCEEEEE
Q 022495          138 AVVCATGFQPGWD-------LFA--PWKA---INLVEACRKRGVNRFILI  175 (296)
Q Consensus       138 ~vv~~ag~~~~~~-------~~~--~~~~---~~~l~~~~~~~~~~iV~~  175 (296)
                      +||.++|......       ...  ..+.   +.+++.+++.+.+-++.+
T Consensus        74 vvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aiviv  123 (150)
T d1t2da1          74 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV  123 (150)
T ss_dssp             EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            9999999654221       111  1111   777888887775444444

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.45  E-value=0.00061  Score=51.74  Aligned_cols=91  Identities=21%  Similarity=0.260  Sum_probs=59.3

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +.++++.|.|. |.||+.+++.|..-|.+|++.+|.+....                ..- .+++.+++.. +|+|+.++
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~----------------~~~-~~~l~ell~~-sDiv~~~~  100 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP----------------WRF-TNSLEEALRE-ARAAVCAL  100 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS----------------SCC-BSCSHHHHTT-CSEEEECC
T ss_pred             ccCceEEEecc-ccccccceeeeeccccccccccccccccc----------------eee-eechhhhhhc-cchhhccc
Confidence            67899999995 99999999999999999999988754211                111 2236677888 99998776


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ...........   ...++.|++.  ..||++|-.
T Consensus       101 pl~~~t~~li~---~~~l~~mk~~--ailIN~~RG  130 (181)
T d1qp8a1         101 PLNKHTRGLVK---YQHLALMAED--AVFVNVGRA  130 (181)
T ss_dssp             CCSTTTTTCBC---HHHHTTSCTT--CEEEECSCG
T ss_pred             ccccccccccc---cceeeecccc--ceEEecccc
Confidence            54433222222   3444444432  245555543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.44  E-value=0.00084  Score=49.93  Aligned_cols=40  Identities=20%  Similarity=0.230  Sum_probs=35.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT  106 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~  106 (296)
                      |++|.|+| .|-+|+.+|+.|+++|++|.+.+|++++...+
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~   40 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL   40 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhh
Confidence            46899997 69999999999999999999999998775543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.43  E-value=0.0007  Score=49.36  Aligned_cols=94  Identities=21%  Similarity=0.196  Sum_probs=54.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC---CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG---FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .++|.|.||||++|+.+++.|.+++   .++..+..+...-+ ..........  .-++.+      ..+.+ +|++|.+
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk-~i~~~~~~~~--~~~~~~------~~~~~-~d~vf~a   71 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ-RMGFAESSLR--VGDVDS------FDFSS-VGLAFFA   71 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC-EEEETTEEEE--CEEGGG------CCGGG-CSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCc-ceeeccccch--hccchh------hhhcc-ceEEEec
Confidence            3689999999999999999997665   35665544332111 1110111111  112211      12455 9999988


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      ++.         .....+.+.+.+.|. ++|-.||..
T Consensus        72 ~p~---------~~s~~~~~~~~~~g~-~VID~Ss~f   98 (144)
T d2hjsa1          72 AAA---------EVSRAHAERARAAGC-SVIDLSGAL   98 (144)
T ss_dssp             SCH---------HHHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             CCc---------chhhhhccccccCCc-eEEeechhh
Confidence            742         112556666777775 677777653

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.36  E-value=0.00018  Score=54.11  Aligned_cols=78  Identities=15%  Similarity=0.171  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~a  143 (296)
                      +.+|+|+|++|.+|...++.+...| .+|++.++++++.+.... .... .++..+-.|..+.+.+...+ .+|++|.|+
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~vid~~  105 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AGAD-YVINASMQDPLAEIRRITESKGVDAVIDLN  105 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-cCCc-eeeccCCcCHHHHHHHHhhcccchhhhccc
Confidence            6799999999999999999998888 588888988877654332 1111 23322222212333333322 499999998


Q ss_pred             CC
Q 022495          144 GF  145 (296)
Q Consensus       144 g~  145 (296)
                      |.
T Consensus       106 g~  107 (170)
T d1jvba2         106 NS  107 (170)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.33  E-value=7.5e-06  Score=62.64  Aligned_cols=43  Identities=26%  Similarity=0.393  Sum_probs=36.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT  106 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~  106 (296)
                      .++++|+|+|.|+ |+.+++++..|.+.| +|++..|+.++.+++
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHH
Confidence            3568999999995 999999999997777 899999998876644

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.30  E-value=0.00094  Score=49.24  Aligned_cols=104  Identities=15%  Similarity=0.059  Sum_probs=57.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-------eEEEEEcCcchh--hhcc----cCCCCCeEEEEcccCCChHHHHHHhc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF-------AVKAGVRDLDKA--KTTL----SKDNPSLQIVKADVTEGSAKLSEAIG  133 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~  133 (296)
                      +||.|+||+|.+|++++-.|++.+.       ++++.+.+....  ..+.    .........+..  .+   ...+.++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~---~~~~~~~   78 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TD---KEEIAFK   78 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ES---CHHHHTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Cc---ccccccC
Confidence            5899999999999999999987542       344444433221  1110    001122222222  22   2356678


Q ss_pred             CCCCEEEEcCCCCCCCCC--c--chhHH---HHHHHHHHHc-CCC-EEEEEc
Q 022495          134 DDSEAVVCATGFQPGWDL--F--APWKA---INLVEACRKR-GVN-RFILIS  176 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~--~--~~~~~---~~~l~~~~~~-~~~-~iV~~S  176 (296)
                      + .|+||.++|.......  .  ...+.   +.+.+...+. +.. .+|.+|
T Consensus        79 ~-~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          79 D-LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             T-CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             C-ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            8 9999999997553221  1  11122   7777776664 432 344444

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.28  E-value=0.00051  Score=52.15  Aligned_cols=75  Identities=17%  Similarity=0.327  Sum_probs=49.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch--hhhcccC-CCC--CeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK--AKTTLSK-DNP--SLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~-~~~--~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      |+|.|.|+ |..|.+++..|.+.|++|+++.|..+.  ....... .++  ....-..++.- .+++.+++++ .|+||.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~-ad~Ii~   77 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFW-PEQLEKCLEN-AEVVLL   77 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEEC-GGGHHHHHTT-CSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccc-cccHHHHHhc-cchhhc
Confidence            68999996 999999999999999999999985432  2222110 011  11111112222 4567888888 999998


Q ss_pred             cCC
Q 022495          142 ATG  144 (296)
Q Consensus       142 ~ag  144 (296)
                      +..
T Consensus        78 avp   80 (180)
T d1txga2          78 GVS   80 (180)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            753

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.27  E-value=0.0035  Score=47.06  Aligned_cols=72  Identities=14%  Similarity=0.257  Sum_probs=53.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      .+|.|+| -|.+|..+++.|++.|++|++.+|++++.+++............  ... .+.+.+.+.. +|.++-+.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~--a~~-~~~~~~~~~~-~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLG--AHS-LEEMVSKLKK-PRRIILLV   74 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE--CSS-HHHHHHHBCS-SCEEEECS
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccc--hhh-hhhhhhhhcc-cceEEEec
Confidence            5799998 59999999999999999999999999988766542111111111  223 5667777777 89999875

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.26  E-value=0.00016  Score=54.02  Aligned_cols=65  Identities=14%  Similarity=0.271  Sum_probs=49.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      |+|.|+| .|.+|+.+|+.|+++|++|++.+|++++.+++..   .+...        .++..++.++ +|+||-|..
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~---~~~~~--------~~~~~e~~~~-~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA---AGAET--------ASTAKAIAEQ-CDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---TTCEE--------CSSHHHHHHH-CSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH---hhhhh--------cccHHHHHhC-CCeEEEEcC
Confidence            5799998 5999999999999999999999999988766543   22221        1224455566 999998863

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.26  E-value=5.5e-05  Score=58.26  Aligned_cols=76  Identities=17%  Similarity=0.171  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC-----CCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK-----DNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      +.|++|.|.|| |..|.+++..|.+.|++|++++|+++....+...     ..+++.+ .-++.- ..++.+++++ .|.
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~-t~~l~~a~~~-ad~   80 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITF-TSDVEKAYNG-AEI   80 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEE-ESCHHHHHTT-CSC
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-cccccc-chhhhhccCC-CCE
Confidence            34678999996 9999999999999999999999998765533210     1122211 111111 2346777888 999


Q ss_pred             EEEcC
Q 022495          139 VVCAT  143 (296)
Q Consensus       139 vv~~a  143 (296)
                      ||.+.
T Consensus        81 iiiav   85 (189)
T d1n1ea2          81 ILFVI   85 (189)
T ss_dssp             EEECS
T ss_pred             EEEcC
Confidence            99875

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.24  E-value=0.00082  Score=51.66  Aligned_cols=78  Identities=19%  Similarity=0.307  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~-~~d~vv  140 (296)
                      .+.+|+|.|+ |.+|...+..+...|. +|++.++++++.+....   -+...+. |..+  ..+.+.+...+ .+|++|
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~---~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vi   99 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA---QGFEIAD-LSLDTPLHEQIAALLGEPEVDCAV   99 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH---TTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh---ccccEEE-eCCCcCHHHHHHHHhCCCCcEEEE
Confidence            3789999986 9999888888877786 78888888877654332   2334332 3222  12345555443 499999


Q ss_pred             EcCCCCC
Q 022495          141 CATGFQP  147 (296)
Q Consensus       141 ~~ag~~~  147 (296)
                      .+.|...
T Consensus       100 d~vG~~~  106 (195)
T d1kola2         100 DAVGFEA  106 (195)
T ss_dssp             ECCCTTC
T ss_pred             ECccccc
Confidence            9998643

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.21  E-value=0.00072  Score=51.23  Aligned_cols=97  Identities=15%  Similarity=0.173  Sum_probs=54.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC-CCeEEEE-EcCcc-----hhhhcccCC--CCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAG-VRDLD-----KAKTTLSKD--NPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~-~r~~~-----~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      |++|.|.||||++|..+++.|.++ ..++..+ .+...     .........  .......  +..+    ....+.+ +
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~-~   73 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQ--PMSD----VRDFSAD-V   73 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEE--EESC----GGGTCTT-C
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccc--cchh----hhhhhcc-c
Confidence            579999999999999999999987 4566544 33211     111111100  0111111  1111    1222345 9


Q ss_pred             CEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          137 EAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      |++|.+.+.         .....+.+...+.++ ++|-.|+..
T Consensus        74 dvvf~alp~---------~~s~~~~~~~~~~~~-~vIDlSadf  106 (179)
T d2g17a1          74 DVVFLATAH---------EVSHDLAPQFLQAGC-VVFDLSGAF  106 (179)
T ss_dssp             CEEEECSCH---------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             ceeeccccc---------hhHHHHhhhhhhcCc-eeecccccc
Confidence            999988641         111455666666664 777777653

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.00016  Score=55.37  Aligned_cols=104  Identities=15%  Similarity=0.144  Sum_probs=57.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEE-EEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKA-GVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv~~  142 (296)
                      +++|||+||+|++|...++.....|.++++ .++++++...+....  +.+ ...|..++  .+.+++...+.+|+|+.+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~--gad-~vi~~~~~~~~~~~~~~~~~GvDvv~D~  107 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL--GFD-AAVNYKTGNVAEQLREACPGGVDVYFDN  107 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS--CCS-EEEETTSSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc--cce-EEeeccchhHHHHHHHHhccCceEEEec
Confidence            478999999999999999988888986554 455555443332111  121 12244441  233333332249999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccC
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGA  183 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~  183 (296)
                      .|-.         .....++.++..  +++|.+++++.|..
T Consensus       108 vGg~---------~~~~~~~~l~~~--G~iv~~G~~s~~~~  137 (187)
T d1vj1a2         108 VGGD---------ISNTVISQMNEN--SHIILCGQISQYNK  137 (187)
T ss_dssp             SCHH---------HHHHHHTTEEEE--EEEEEC--------
T ss_pred             CCch---------hHHHHhhhcccc--ccEEEecccccccc
Confidence            8721         113344444433  48999888765543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.20  E-value=0.00089  Score=45.09  Aligned_cols=85  Identities=18%  Similarity=0.300  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCCchHH-HHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           65 KQKKIFVAGATGSSG-KRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +.|+|.+.|- |++| +.||+.|.++|++|.+.|+......+.+.  ..++.+..++-.+       .+.+ .|.||...
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~--~~Gi~v~~g~~~~-------~i~~-~d~vV~S~   75 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA--QAGAKIYIGHAEE-------HIEG-ASVVVVSS   75 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH--HTTCEEEESCCGG-------GGTT-CSEEEECT
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH--HCCCeEEECCccc-------cCCC-CCEEEECC
Confidence            3678999985 6677 67899999999999999988654443332  2456665544322       1356 89999888


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                      ++..+.         .-+..|++.|+
T Consensus        76 AI~~~n---------pel~~A~~~gi   92 (96)
T d1p3da1          76 AIKDDN---------PELVTSKQKRI   92 (96)
T ss_dssp             TSCTTC---------HHHHHHHHTTC
T ss_pred             CcCCCC---------HHHHHHHHcCC
Confidence            765331         23455777776

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.19  E-value=0.00059  Score=50.19  Aligned_cols=90  Identities=14%  Similarity=0.184  Sum_probs=56.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFQ  146 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~~  146 (296)
                      |||.|+| .|.+|+.+++.|+++|++|++.+|.+.+......   .++.     +.   ++..++++. +|+||-|... 
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~---~~~~-----~~---~~~~e~~~~-~diIi~~v~~-   66 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA---RTVG-----VT---ETSEEDVYS-CPVVISAVTP-   66 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH---HHHT-----CE---ECCHHHHHT-SSEEEECSCG-
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh---hccc-----cc---ccHHHHHhh-cCeEEEEecC-
Confidence            5799997 5999999999999999999998887765543332   1111     11   113345667 9999988631 


Q ss_pred             CCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          147 PGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       147 ~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                              .....++..+...--+.+|-+||.
T Consensus        67 --------~~~~~~~~~~~~~~~~~~id~st~   90 (152)
T d1i36a2          67 --------GVALGAARRAGRHVRGIYVDINNI   90 (152)
T ss_dssp             --------GGHHHHHHHHHTTCCSEEEECSCC
T ss_pred             --------chHHHHHHhhcccCCceeeccCcC
Confidence                    111233333443333466667765

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=97.19  E-value=0.00032  Score=54.10  Aligned_cols=94  Identities=12%  Similarity=0.054  Sum_probs=61.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|.|.| .|.||+.+++.|..-|.+|++.++........     ..        .. .+++.+.++. +|+|+.+
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~-----~~--------~~-~~~l~~~l~~-sDii~~~  103 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK-----KG--------YY-VDSLDDLYKQ-ADVISLH  103 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH-----TT--------CB-CSCHHHHHHH-CSEEEEC
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc-----ce--------ee-eccccccccc-ccccccc
Confidence            46789999999 59999999999999999999987665432211     11        11 2346777887 9999877


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +...........   ...++.|++.  ..||++|=
T Consensus       104 ~plt~~T~~li~---~~~l~~mk~~--a~lIN~sR  133 (197)
T d1j4aa1         104 VPDVPANVHMIN---DESIAKMKQD--VVIVNVSR  133 (197)
T ss_dssp             SCCCGGGTTCBS---HHHHHHSCTT--EEEEECSC
T ss_pred             CCcccccccccc---HHHHhhhCCc--cEEEecCc
Confidence            654433222221   4555655543  25666654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.17  E-value=0.00062  Score=50.76  Aligned_cols=96  Identities=18%  Similarity=0.158  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcCCCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|+|.|+ |.+|...++.+...|.+|+++++++++.+.... .... .++  |..+  ..+.+.+...+ .+.+|.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-~Ga~-~~i--~~~~~~~~~~~~~~~~g-~~~~i~~  100 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARK-LGAS-LTV--NARQEDPVEAIQRDIGG-AHGVLVT  100 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCS-EEE--ETTTSCHHHHHHHHHSS-EEEEEEC
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhc-cCcc-ccc--cccchhHHHHHHHhhcC-Ccccccc
Confidence            3689999986 999999999888899999999999887654332 1111 222  4443  12344444455 6777766


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILIS  176 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~S  176 (296)
                      ++..        ......++.++..  +++|.++
T Consensus       101 ~~~~--------~~~~~~~~~l~~~--G~iv~~G  124 (166)
T d1llua2         101 AVSN--------SAFGQAIGMARRG--GTIALVG  124 (166)
T ss_dssp             CSCH--------HHHHHHHTTEEEE--EEEEECC
T ss_pred             cccc--------hHHHHHHHHhcCC--cEEEEEE
Confidence            6531        1113333433333  4788775

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.16  E-value=0.001  Score=50.10  Aligned_cols=79  Identities=13%  Similarity=0.071  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~  142 (296)
                      .+.+|+|.|+ |++|...+..+...| .+|++.++++++.+.... ......+...|-.|..+...+...+ .+|++|.+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~  105 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV  105 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-hCCeeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence            3689999998 789999999999988 588888998887664432 1112122122333312333333322 49999999


Q ss_pred             CCC
Q 022495          143 TGF  145 (296)
Q Consensus       143 ag~  145 (296)
                      .|.
T Consensus       106 ~G~  108 (176)
T d2jhfa2         106 IGR  108 (176)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            884

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.00059  Score=52.19  Aligned_cols=95  Identities=16%  Similarity=0.063  Sum_probs=64.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.++++.|.| .|.||+.+++.|..-|.+|+..++......       ...       .. .+.++++++. .|+|+.
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------~~~-------~~-~~~l~ell~~-sDii~i  102 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPL-------GNA-------TQ-VQHLSDLLNM-SDVVSL  102 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCC-------TTC-------EE-CSCHHHHHHH-CSEEEE
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccccchh-------hhh-------hh-hhhHHHHHhh-ccceee
Confidence            456789999998 699999999999999999999887643211       111       11 2346677787 999998


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      ++...........   ...++.|++.  ..||++|-.
T Consensus       103 ~~plt~~T~~li~---~~~l~~mk~~--a~lIN~aRG  134 (188)
T d1sc6a1         103 HVPENPSTKNMMG---AKEISLMKPG--SLLINASRG  134 (188)
T ss_dssp             CCCSSTTTTTCBC---HHHHHHSCTT--EEEEECSCS
T ss_pred             cccCCcchhhhcc---HHHHhhCCCC--CEEEEcCcH
Confidence            7765544332222   5677777553  257777653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=97.10  E-value=0.00032  Score=53.83  Aligned_cols=98  Identities=11%  Similarity=0.059  Sum_probs=63.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.++++.|.| .|.||+.+++.|..-|.+|...++..........   .       .... .+++.+++.. +|+|+.
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---~-------~~~~-~~~l~~ll~~-sD~v~l  109 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS---Y-------QATF-HDSLDSLLSV-SQFFSL  109 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH---H-------TCEE-CSSHHHHHHH-CSEEEE
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc---c-------cccc-cCCHHHHHhh-CCeEEe
Confidence            356789999999 4999999999999999999988876543221110   0       0111 2447777887 999987


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ++...........   ...++.|++..  .||++|=
T Consensus       110 ~~plt~~T~~li~---~~~l~~mk~~a--~lIN~sR  140 (191)
T d1gdha1         110 NAPSTPETRYFFN---KATIKSLPQGA--IVVNTAR  140 (191)
T ss_dssp             CCCCCTTTTTCBS---HHHHTTSCTTE--EEEECSC
T ss_pred             cCCCCchHhheec---HHHhhCcCCcc--EEEecCC
Confidence            7655443332222   45666666532  5666664

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=97.09  E-value=0.0013  Score=50.40  Aligned_cols=71  Identities=17%  Similarity=0.214  Sum_probs=48.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.++++.|.| -|.||+.+++.|..-|.+|++.++.........    .+       +.. .+++.++++. +|+|+.
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~----~~-------~~~-~~~l~~ll~~-sD~i~~  110 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA----LG-------LQR-VSTLQDLLFH-SDCVTL  110 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH----HT-------CEE-CSSHHHHHHH-CSEEEE
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhh----hc-------ccc-ccchhhcccc-CCEEEE
Confidence            457899999998 599999999999999999999887654322111    01       111 2335566666 777776


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +....
T Consensus       111 ~~plt  115 (193)
T d1mx3a1         111 HCGLN  115 (193)
T ss_dssp             CCCCC
T ss_pred             eeccc
Confidence            55443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.06  E-value=0.00047  Score=52.56  Aligned_cols=96  Identities=13%  Similarity=0.103  Sum_probs=62.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.++++.|.| .|.||+.+++.|..-|.+|++.++...+.....    ..+.         ..++.++++. +|+|+.
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~----~~~~---------~~~l~ell~~-sDiv~~  104 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ----LGIE---------LLSLDDLLAR-ADFISV  104 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH----HTCE---------ECCHHHHHHH-CSEEEE
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh----cCce---------eccHHHHHhh-CCEEEE
Confidence            346789999999 599999999999988999999887765433221    1111         1235667777 999987


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +............   ...+..|++.  ..||++|=
T Consensus       105 ~~Plt~~T~~lin---~~~l~~mk~~--a~lIN~sR  135 (184)
T d1ygya1         105 HLPKTPETAGLID---KEALAKTKPG--VIIVNAAR  135 (184)
T ss_dssp             CCCCSTTTTTCBC---HHHHTTSCTT--EEEEECSC
T ss_pred             cCCCCchhhhhhh---HHHHhhhCCC--ceEEEecc
Confidence            7665544333222   4555555543  25666654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.04  E-value=0.001  Score=49.38  Aligned_cols=102  Identities=14%  Similarity=0.171  Sum_probs=71.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      .-+|+|.|| |-.|..-++.....|.+|.+++.++++.+.+.......++..   ..+ .+.+.+.+.+ .|+||.++-+
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~-~~~l~~~~~~-aDivI~aali  105 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSN-SAEIETAVAE-ADLLIGAVLV  105 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECC-HHHHHHHHHT-CSEEEECCCC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhh-hhhHHHhhcc-CcEEEEeeec
Confidence            458999996 999999999999999999999999887765432122334443   334 6778888998 9999999876


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      .....+..-.  +..++.|+.-.  -||=+|-
T Consensus       106 pG~~aP~lIt--~~mv~~Mk~GS--VIVDvai  133 (168)
T d1pjca1         106 PGRRAPILVP--ASLVEQMRTGS--VIVDVAV  133 (168)
T ss_dssp             TTSSCCCCBC--HHHHTTSCTTC--EEEETTC
T ss_pred             CCcccCeeec--HHHHhhcCCCc--EEEEeec
Confidence            5443322111  66777776543  3444444

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.02  E-value=0.00072  Score=50.93  Aligned_cols=97  Identities=12%  Similarity=0.050  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeE-EEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAV-KAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~d~vv~~  142 (296)
                      +.+|+|.|+ |.+|...++.+...|..+ ++.++++.+.+.... . .-.+++  |..+  ..+.+.+...+.+|++|.|
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~-Ga~~~i--~~~~~~~~~~i~~~t~gg~D~vid~  103 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-L-GATHVI--NSKTQDPVAAIKEITDGGVNFALES  103 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-H-TCSEEE--ETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH-c-CCeEEE--eCCCcCHHHHHHHHcCCCCcEEEEc
Confidence            679999997 999999999888888765 555677766553321 1 112333  4444  1233334333359999999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      .|..        ......++.++..  +++++++.
T Consensus       104 ~G~~--------~~~~~~~~~~~~~--G~i~~~G~  128 (174)
T d1f8fa2         104 TGSP--------EILKQGVDALGIL--GKIAVVGA  128 (174)
T ss_dssp             SCCH--------HHHHHHHHTEEEE--EEEEECCC
T ss_pred             CCcH--------HHHHHHHhcccCc--eEEEEEee
Confidence            8842        1112333333333  48888764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.96  E-value=0.00087  Score=51.69  Aligned_cols=93  Identities=16%  Similarity=0.085  Sum_probs=59.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+++|.|.| .|.||+.+++.|..-|.+|++.++......      ...+     +    ..++.+.++. +|+|+.+
T Consensus        42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~------~~~~-----~----~~~l~~l~~~-~D~v~~~  104 (199)
T d1dxya1          42 ELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD------HPDF-----D----YVSLEDLFKQ-SDVIDLH  104 (199)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC------CTTC-----E----ECCHHHHHHH-CSEEEEC
T ss_pred             cccceeeeeee-cccccccccccccccceeeeccCCccchhh------hcch-----h----HHHHHHHHHh-cccceee
Confidence            46789999999 599999999999999999999887654321      1111     1    1235666777 8988876


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ............   ...++.|++..  -+|++|=
T Consensus       105 ~plt~~T~~li~---~~~l~~mk~~a--~lIN~aR  134 (199)
T d1dxya1         105 VPGIEQNTHIIN---EAAFNLMKPGA--IVINTAR  134 (199)
T ss_dssp             CCCCGGGTTSBC---HHHHHHSCTTE--EEEECSC
T ss_pred             eccccccccccc---HHHhhccCCce--EEEeccc
Confidence            654332222211   45556565432  4666654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.96  E-value=0.0014  Score=49.40  Aligned_cols=78  Identities=14%  Similarity=0.118  Sum_probs=50.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~a  143 (296)
                      +.+|+|+|+ |++|...++.+...| .+|+++++++++.+.... ......+-.-|-.+..+.+.+...+ .+|++|.+.
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~  107 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECISPKDSTKPISEVLSEMTGNNVGYTFEVI  107 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECS
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCCcEEECccccchHHHHHHHHhccccceEEEEeC
Confidence            679999986 999999999999999 579999999988764332 1111111112222212333333322 499999998


Q ss_pred             CC
Q 022495          144 GF  145 (296)
Q Consensus       144 g~  145 (296)
                      |.
T Consensus       108 g~  109 (176)
T d1d1ta2         108 GH  109 (176)
T ss_dssp             CC
T ss_pred             Cc
Confidence            74

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.95  E-value=0.00034  Score=51.58  Aligned_cols=65  Identities=17%  Similarity=0.218  Sum_probs=47.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |+|.++| .|-+|+++++.|++.|++|++.+|++++..++....  ++.+    ..+    ..++++. .|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~--g~~~----~~~----~~~~~~~-~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL--ALPY----AMS----HQDLIDQ-VDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH--TCCB----CSS----HHHHHHT-CSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc--ceee----ech----hhhhhhc-cceeeeec
Confidence            5799998 599999999999999999999999988766543211  1111    112    4455566 99999775

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.89  E-value=0.0022  Score=48.80  Aligned_cols=73  Identities=11%  Similarity=0.078  Sum_probs=49.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.++++.|.| .|.||+.+++.|..-|.+|...++..........   .+       +.. ..++.+.++. +|+|+.
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---~~-------~~~-~~~l~~~l~~-sD~v~~  106 (188)
T d2naca1          40 YDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE---LN-------LTW-HATREDMYPV-CDVVTL  106 (188)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH---HT-------CEE-CSSHHHHGGG-CSEEEE
T ss_pred             eeccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc---cc-------ccc-cCCHHHHHHh-ccchhh
Confidence            467899999999 5999999999999889999998886533221110   01       111 2345666776 787776


Q ss_pred             cCCCCC
Q 022495          142 ATGFQP  147 (296)
Q Consensus       142 ~ag~~~  147 (296)
                      +.....
T Consensus       107 ~~plt~  112 (188)
T d2naca1         107 NCPLHP  112 (188)
T ss_dssp             CSCCCT
T ss_pred             cccccc
Confidence            554433

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.001  Score=49.16  Aligned_cols=71  Identities=25%  Similarity=0.225  Sum_probs=52.6

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..+.+|++.|.| .|.||+.+|+.|...|.+|++...+|.+.-+..-   .+..         ...+++++.. .|++|-
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~---dG~~---------v~~~~~a~~~-adivvt   85 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAM---EGYE---------VTTMDEACQE-GNIFVT   85 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---TTCE---------ECCHHHHTTT-CSEEEE
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhc---CceE---------eeehhhhhhh-ccEEEe
Confidence            346799999998 7999999999999999999999998855332211   1222         2235666776 899998


Q ss_pred             cCCCC
Q 022495          142 ATGFQ  146 (296)
Q Consensus       142 ~ag~~  146 (296)
                      +.|..
T Consensus        86 aTGn~   90 (163)
T d1li4a1          86 TTGCI   90 (163)
T ss_dssp             CSSCS
T ss_pred             cCCCc
Confidence            88754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.85  E-value=0.002  Score=48.10  Aligned_cols=41  Identities=15%  Similarity=0.307  Sum_probs=33.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCcchhhhcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDLDKAKTTL  107 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~  107 (296)
                      ||+|+|+| .|.+|..+++.|.+.|+  +|++.+++++..+...
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~   43 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   43 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH
Confidence            46899998 59999999999999995  6888888877665443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.84  E-value=0.00095  Score=47.04  Aligned_cols=36  Identities=17%  Similarity=0.261  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK  102 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~  102 (296)
                      .++++|.|| |++|..+|..|.++|.+|+++.+.+.-
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            579999996 999999999999999999999988753

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.83  E-value=0.0016  Score=48.75  Aligned_cols=75  Identities=17%  Similarity=0.075  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC-ChHHHHHHhcC-CCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE-GSAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~-~~d~vv~~  142 (296)
                      +.+|+|.|+ |.+|...++.+...|. .|++.++++++.+.... . ...+++  |..+ ..+.+.+...+ .+|++|.+
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~-ga~~~i--~~~~~~~~~~~~~~~~~g~d~vid~  107 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L-GADHVV--DARRDPVKQVMELTRGRGVNVAMDF  107 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T-TCSEEE--ETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c-ccceee--cCcccHHHHHHHhhCCCCceEEEEe
Confidence            678999986 9999999998888885 66777888776654332 1 122333  3322 12334443333 49999999


Q ss_pred             CCC
Q 022495          143 TGF  145 (296)
Q Consensus       143 ag~  145 (296)
                      +|.
T Consensus       108 ~g~  110 (172)
T d1h2ba2         108 VGS  110 (172)
T ss_dssp             SCC
T ss_pred             cCc
Confidence            984

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.83  E-value=0.0027  Score=47.67  Aligned_cols=76  Identities=13%  Similarity=0.031  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC---ChHHHHHHhcC-CCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE---GSAKLSEAIGD-DSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~~~-~~d~v  139 (296)
                      .+.+|+|.|+ |++|...++.+...|. +|++.++++++.+....   -+.+.+ .|..+   ..+...+...+ ..|++
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~---lGa~~~-i~~~~~d~~~~~~~~~~~~~G~d~v  101 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE---LGATEC-LNPKDYDKPIYEVICEKTNGGVDYA  101 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH---TTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH---cCCcEE-EcCCCchhHHHHHHHHhcCCCCcEE
Confidence            3789999986 9999999999999995 68888898887654332   222222 12221   11233333332 49999


Q ss_pred             EEcCCC
Q 022495          140 VCATGF  145 (296)
Q Consensus       140 v~~ag~  145 (296)
                      |.++|.
T Consensus       102 id~~g~  107 (174)
T d1p0fa2         102 VECAGR  107 (174)
T ss_dssp             EECSCC
T ss_pred             EEcCCC
Confidence            999874

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.82  E-value=0.0023  Score=50.95  Aligned_cols=105  Identities=19%  Similarity=0.257  Sum_probs=63.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcc---hhhhc-------------------ccCCCCCeEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD---KAKTT-------------------LSKDNPSLQIVKA  119 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~-------------------~~~~~~~~~~~~~  119 (296)
                      .+++.+|+|.|+ |++|++++..|+..|. +++++|.+.-   .+...                   +....+.+.+...
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            356789999995 9999999999999996 6777765531   11110                   0112244444444


Q ss_pred             ccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccce
Q 022495          120 DVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       120 D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      +.....+.....+.. .|++|.+..         .... ..+-+.+.+.++ .+|+.+...
T Consensus       106 ~~~~~~~~~~~~~~~-~divid~~d---------~~~~~~~in~~~~~~~i-p~i~g~~~~  155 (247)
T d1jw9b_         106 NALLDDAELAALIAE-HDLVLDCTD---------NVAVRNQLNAGCFAAKV-PLVSGAAIR  155 (247)
T ss_dssp             CSCCCHHHHHHHHHT-SSEEEECCS---------SHHHHHHHHHHHHHHTC-CEEEEEEEB
T ss_pred             hhhhhhccccccccc-cceeeeccc---------hhhhhhhHHHHHHHhCC-Ccccccccc
Confidence            432213555666677 899887752         1122 445566777775 566654443

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0007  Score=51.93  Aligned_cols=104  Identities=18%  Similarity=0.134  Sum_probs=63.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccC---------CCCCe----------EEEEcccCCCh
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSK---------DNPSL----------QIVKADVTEGS  125 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~----------~~~~~D~~d~~  125 (296)
                      +-++|.|.|| |.+|+.+|..++..|++|++.+++++.+......         .....          .-...-+.- .
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~-~   80 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S   80 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccc-c
Confidence            4579999997 9999999999999999999999998654321100         00000          000000111 1


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccce
Q 022495          126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       126 ~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      .++.+++.+ +|.|+-+..        +.... +.++....+.-....|+.|+++
T Consensus        81 ~d~~~a~~~-ad~ViEav~--------E~l~~K~~v~~~l~~~~~~~~ilasnTS  126 (192)
T d1f0ya2          81 TDAASVVHS-TDLVVEAIV--------ENLKVKNELFKRLDKFAAEHTIFASNTS  126 (192)
T ss_dssp             SCHHHHTTS-CSEEEECCC--------SCHHHHHHHHHHHTTTSCTTCEEEECCS
T ss_pred             chhHhhhcc-cceehhhcc--------cchhHHHHHHHHHhhhcccCceeeccCc
Confidence            234566777 999998863        22223 6677666655434556666554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.80  E-value=0.0013  Score=46.42  Aligned_cols=37  Identities=19%  Similarity=0.120  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK  102 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~  102 (296)
                      +.++|+|.|| |++|..+|..|.+.|.+|+++.+.+.-
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcc
Confidence            4679999986 999999999999999999999887643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.79  E-value=0.00098  Score=48.95  Aligned_cols=64  Identities=14%  Similarity=0.330  Sum_probs=46.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |+|.++|+ |.+|.++++.|++.| ++|++.+|++++...+...  .++... .|..+        +.. +|+||-+.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~--~~~~~~-~~~~~--------v~~-~Div~lav   65 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE--LGVETS-ATLPE--------LHS-DDVLILAV   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH--TCCEEE-SSCCC--------CCT-TSEEEECS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh--cccccc-ccccc--------ccc-cceEEEec
Confidence            57999986 999999999999887 8999999999877655431  233322 12211        355 89999764

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.79  E-value=0.00063  Score=51.31  Aligned_cols=32  Identities=22%  Similarity=0.179  Sum_probs=26.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGV   97 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~   97 (296)
                      |++|.|.||||++|..+++.|.++- .++..+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            4689999999999999999998763 5666554

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.76  E-value=0.0033  Score=48.00  Aligned_cols=39  Identities=26%  Similarity=0.078  Sum_probs=32.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL  107 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~  107 (296)
                      |+|.|.| .|++|..++..| ++|++|++.+.++++...+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            6799997 799999999755 57999999999987766544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.76  E-value=0.0017  Score=49.90  Aligned_cols=69  Identities=10%  Similarity=0.171  Sum_probs=49.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      ++++++|+|-| -|.+|+++++.|.+.|.+|++.+.++........   .+.+.     -+ .+   +++..++|+++-|
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~---~g~~~-----~~-~~---~~~~~~~DI~iPc   90 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA---LGHTA-----VA-LE---DVLSTPCDVFAPC   90 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---TTCEE-----CC-GG---GGGGCCCSEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh---hcccc-----cC-cc---ccccccceeeecc
Confidence            57899999998 6999999999999999999998888766543321   12222     12 22   2343349999988


Q ss_pred             CC
Q 022495          143 TG  144 (296)
Q Consensus       143 ag  144 (296)
                      |.
T Consensus        91 A~   92 (201)
T d1c1da1          91 AM   92 (201)
T ss_dssp             SC
T ss_pred             cc
Confidence            74

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.74  E-value=0.0035  Score=47.00  Aligned_cols=78  Identities=10%  Similarity=0.007  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEcccCC-ChHHHHHHhcC-CCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE-GSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~-~~d~vv~  141 (296)
                      .+.+|+|+|+ |+||...++.+...|+ .|++.++++++.+.... . .--.++...-.| ....+.+...+ .+|++|.
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~-Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie  104 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-L-GATDCLNPRELDKPVQDVITELTAGGVDYSLD  104 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-TCSEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-h-CCCcccCCccchhhhhhhHhhhhcCCCcEEEE
Confidence            3679999985 9999999999999997 57777888877543322 1 112233222222 12223333222 5999999


Q ss_pred             cCCC
Q 022495          142 ATGF  145 (296)
Q Consensus       142 ~ag~  145 (296)
                      |+|.
T Consensus       105 ~~G~  108 (174)
T d1e3ia2         105 CAGT  108 (174)
T ss_dssp             SSCC
T ss_pred             eccc
Confidence            9984

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.65  E-value=0.0015  Score=45.66  Aligned_cols=35  Identities=20%  Similarity=0.148  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      .++++|.|| |++|..+|..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            378999996 99999999999999999999988764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.64  E-value=0.00084  Score=49.21  Aligned_cols=37  Identities=24%  Similarity=0.408  Sum_probs=32.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      ..+++|++||+|| |.+|..-++.|++.|.+|++++-.
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3567999999997 999999999999999999998643

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0033  Score=46.76  Aligned_cols=43  Identities=16%  Similarity=0.193  Sum_probs=37.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK  104 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~  104 (296)
                      .++.||+|.|.|-+.-+|+.++..|+++|++|++.........
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            4678999999999999999999999999999998776554443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.56  E-value=0.0021  Score=47.70  Aligned_cols=95  Identities=17%  Similarity=0.149  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC--ChHHHHHHhcCCCCEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE--GSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~d~vv~~a  143 (296)
                      +.+|+|.|+ |.+|...++.+...|++|+++++++++......   -+++.+. |..+  ..+.+.+...+ .|.+|.++
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~---~Ga~~~~-~~~~~~~~~~~~~~~~~-~~~~v~~~  101 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE---LGADLVV-NPLKEDAAKFMKEKVGG-VHAAVVTA  101 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---TTCSEEE-CTTTSCHHHHHHHHHSS-EEEEEESS
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh---cCcceec-ccccchhhhhcccccCC-CceEEeec
Confidence            679999975 999999999888899999999999887664432   2333332 2222  12345555566 77777776


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEc
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFILIS  176 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~S  176 (296)
                      +..        ......++.++..  +++++++
T Consensus       102 ~~~--------~~~~~a~~~l~~~--G~i~~~g  124 (168)
T d1rjwa2         102 VSK--------PAFQSAYNSIRRG--GACVLVG  124 (168)
T ss_dssp             CCH--------HHHHHHHHHEEEE--EEEEECC
T ss_pred             CCH--------HHHHHHHHHhccC--CceEecc
Confidence            521        1123444444443  3677664

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.53  E-value=0.011  Score=41.84  Aligned_cols=88  Identities=15%  Similarity=0.173  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCC---chHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           65 KQKKIFVAGAT---GSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      +-++|.|+|+|   +..|..+.+.|.+.| .+|+.+..+.+..        .++..+ -++.|       +=.. +|.++
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i--------~G~~~y-~sl~d-------lp~~-vDlvv   69 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV--------QGVKAY-KSVKD-------IPDE-IDLAI   69 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE--------TTEECB-SSTTS-------CSSC-CSEEE
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc--------CCeEee-cchhh-------cCCC-CceEE
Confidence            45799999999   999999999987766 5787664432221        122221 24444       1123 99999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .+..         ......+++.+.+.|++.++.+|+.
T Consensus        70 i~vp---------~~~~~~~~~~~~~~g~~~~vi~s~G   98 (129)
T d2csua1          70 IVVP---------KRFVKDTLIQCGEKGVKGVVIITAG   98 (129)
T ss_dssp             ECSC---------HHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred             EecC---------hHHhHHHHHHHHHcCCCEEEEeccc
Confidence            7753         2233678888889999888888775

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.52  E-value=0.0042  Score=46.41  Aligned_cols=77  Identities=13%  Similarity=0.076  Sum_probs=46.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCeEEEEc-ccCCChHHHHHHhcC-CCCEEEEc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSLQIVKA-DVTEGSAKLSEAIGD-DSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~d~~~~~~~~~~~-~~d~vv~~  142 (296)
                      +.+|+|.|+ |++|...++.+...|. .|++.++++++.+.... ... -.++.. +-.+......+...+ .+|++|.+
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~-lGa-~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~  105 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-FGA-TECINPQDFSKPIQEVLIEMTDGGVDYSFEC  105 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-HTC-SEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH-hCC-cEEEeCCchhhHHHHHHHHHcCCCCcEeeec
Confidence            679999997 7899999999988995 56666777766543221 111 122221 111112222222222 49999999


Q ss_pred             CCC
Q 022495          143 TGF  145 (296)
Q Consensus       143 ag~  145 (296)
                      .|.
T Consensus       106 ~G~  108 (176)
T d2fzwa2         106 IGN  108 (176)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            874

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.50  E-value=0.0016  Score=45.92  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      .++++|.|| |++|..+|..|.+.|.+|+++.|.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            478999996 99999999999999999999988753

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.50  E-value=0.016  Score=42.23  Aligned_cols=92  Identities=20%  Similarity=0.251  Sum_probs=50.3

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC---eEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      +|.|.||||++|..+++.|.++.+   ++..+.-+ ....+......  -.....+..+      ..+.+ .|.++.+++
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~-~s~G~~~~~~~--~~~~~~~~~~------~~~~~-~d~~f~~~~   72 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-RSAGKSLKFKD--QDITIEETTE------TAFEG-VDIALFSAG   72 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECG-GGTTCEEEETT--EEEEEEECCT------TTTTT-CSEEEECSC
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccc-ccccccccccC--Ccccccccch------hhhhh-hhhhhhccC
Confidence            799999999999999998888754   23333322 22111111011  1111222222      12345 888888875


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                      .         .....+.+.+.+.++ ++|=.|+..
T Consensus        73 ~---------~~s~~~~~~~~~~~~-~VIDlSsdf   97 (154)
T d2gz1a1          73 S---------STSAKYAPYAVKAGV-VVVDNTSYF   97 (154)
T ss_dssp             H---------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             c---------cchhhHHhhhccccc-eehhcChhh
Confidence            2         111445555556664 677777653

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.48  E-value=0.017  Score=39.94  Aligned_cols=82  Identities=24%  Similarity=0.395  Sum_probs=53.3

Q ss_pred             CeEEEEcCC---chHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGAT---GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |+|.|.|++   +-.|..+.+.|++.|++|+.+..+.+.   .     .+...+ -++.|       +=.. +|.++-+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~---i-----~G~~~y-~sl~~-------lp~~-~D~vvi~v   64 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE---I-----EGLKCY-RSVRE-------LPKD-VDVIVFVV   64 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---E-----TTEECB-SSGGG-------SCTT-CCEEEECS
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc---c-----cCcccc-ccchh-------cccc-ceEEEEEe
Confidence            689999998   679999999999999998865432211   1     122222 12222       2223 89888774


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          144 GFQPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       144 g~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                      .         ......+++.+.+.|++.+++
T Consensus        65 p---------~~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          65 P---------PKVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             C---------HHHHHHHHHHHHHTTCCEEEE
T ss_pred             C---------HHHHHHHHHHHHhcCCceEEe
Confidence            2         223367788888889877655

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.48  E-value=0.0017  Score=45.39  Aligned_cols=35  Identities=20%  Similarity=0.207  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      .++++|.|| |++|..+|..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            378999996 99999999999999999999998753

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.47  E-value=0.0012  Score=49.71  Aligned_cols=73  Identities=18%  Similarity=0.255  Sum_probs=49.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCC--CCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDN--PSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      |+|.|+| .|.+|..+++.|++.|++|.+.+|++++..++.....  ........ ..+ .+.+...+.. .+.++-+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~-~~~~~~~~   76 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FET-MEAFAASLKK-PRKALILV   76 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSC-HHHHHHHBCS-SCEEEECC
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhh-hhh-hhHHHHhccc-ceEEEEee
Confidence            5799998 6999999999999999999999999988775543111  11111111 223 4555666666 66666554

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.46  E-value=0.0064  Score=45.23  Aligned_cols=83  Identities=16%  Similarity=0.035  Sum_probs=54.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEccc--CCChHHHHHHhcCCCCEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADV--TEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~~~~~d~v  139 (296)
                      .+++||+++|.|-+.-+|+.++..|+++|+.|+....+-........ .-.-......|+  .. .+.+++.... .|+|
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~lk~~~~~-aDIv  101 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE-SLKLNKHHVEDLGEYS-EDLLKKCSLD-SDVV  101 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC-CSSCCCCEEEEEEECC-HHHHHHHHHH-CSEE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccccc-ceeeeeeccccccccc-hhHHhhcccc-CCEE
Confidence            36789999999999999999999999999999876654221100000 000011112222  22 4667777777 9999


Q ss_pred             EEcCCCCC
Q 022495          140 VCATGFQP  147 (296)
Q Consensus       140 v~~ag~~~  147 (296)
                      |..+|...
T Consensus       102 IsavG~p~  109 (171)
T d1edza1         102 ITGVPSEN  109 (171)
T ss_dssp             EECCCCTT
T ss_pred             EEccCCCc
Confidence            99988643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.44  E-value=0.002  Score=45.39  Aligned_cols=34  Identities=18%  Similarity=0.149  Sum_probs=31.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      ++++|.|| |+||..+|..|.+.|.+|+++.+.+.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            68999996 99999999999999999999988764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.002  Score=44.86  Aligned_cols=34  Identities=18%  Similarity=0.066  Sum_probs=31.2

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      ++++|.|| |++|..+|..|.+.|.+|+++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            68999996 99999999999999999999988764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.40  E-value=0.0023  Score=45.81  Aligned_cols=37  Identities=14%  Similarity=0.190  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK  102 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~  102 (296)
                      ..++++|.|| |++|..+|..|.+.|.+|+++.+.+.-
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            3589999996 999999999999999999999887643

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0023  Score=45.25  Aligned_cols=34  Identities=21%  Similarity=0.196  Sum_probs=31.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      |+++|.|| |+||..+|..|.+.|.+|+++.|.+.
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            78999996 99999999999999999999999753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.35  E-value=0.0029  Score=44.28  Aligned_cols=35  Identities=23%  Similarity=0.078  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      .++++|+|| |+||..+|..|.+.|.+|+++.+...
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            378999996 99999999999999999999998754

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.33  E-value=0.0032  Score=40.30  Aligned_cols=63  Identities=19%  Similarity=0.248  Sum_probs=43.6

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCC-ChHHHHHHhcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTE-GSAKLSEAIGD  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~  134 (296)
                      +|+|.|.|| |.+|+-++.+-..-|.+|++++-+++.....     ....++..+..+ +...+.+.+..
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~-----~a~dvIT~e~E~~~~~~l~~~la~   64 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPAAVP-----FQQSVITAEIERWPETALTRQLAR   64 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGGGSC-----GGGSEEEESSSCCCCCHHHHHHHT
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCcccc-----cccceEEEeeccCChHHHHHHHHH
Confidence            478999995 9999999999999999999998776543322     233556655554 12345554544

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.32  E-value=0.0025  Score=44.80  Aligned_cols=32  Identities=28%  Similarity=0.274  Sum_probs=29.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      ++++|+|| |+||..+|..|.+.|.+|+++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            68999996 999999999999999999999875

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.32  E-value=0.0015  Score=49.78  Aligned_cols=38  Identities=26%  Similarity=0.195  Sum_probs=34.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK  104 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~  104 (296)
                      -++|.|.|| |.+|+.+|..++..|++|++.+++++...
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~   41 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIE   41 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHh
Confidence            478999997 99999999999999999999999986544

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.30  E-value=0.0022  Score=44.55  Aligned_cols=35  Identities=17%  Similarity=0.132  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      .++++|.|| |++|..+|..|.+.|.+|+++.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            368999986 99999999999999999999988754

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.29  E-value=0.00058  Score=51.99  Aligned_cols=33  Identities=33%  Similarity=0.487  Sum_probs=26.9

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGV   97 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~   97 (296)
                      +..+|.|.||||+.|..+++.|.++- .++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            45789999999999999999998864 4665553

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.26  E-value=0.0028  Score=50.04  Aligned_cols=34  Identities=38%  Similarity=0.529  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      .++|+|+|| |..|...|..|.++|++|.++.|..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            468999996 9999999999999999999999864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.25  E-value=0.0082  Score=44.93  Aligned_cols=102  Identities=11%  Similarity=0.080  Sum_probs=65.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcc--------------------cCCC-h
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKAD--------------------VTEG-S  125 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D--------------------~~d~-~  125 (296)
                      -+|+|.|| |-.|..-++.....|++|.+++.++++.+++..   ....++..+                    .... .
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~---l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES---LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH---TTCEECCC-----------------------CCHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH---hhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            48999996 999999999999999999999999887665432   111222111                    1110 3


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       126 ~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +.+.+.+.. .|+||-.+-+.....+..-.  +.+++.|+.-.  -||=++-
T Consensus       106 ~~l~~~l~~-aDlVI~talipG~~aP~lit--~~mv~~Mk~GS--VIVDvai  152 (183)
T d1l7da1         106 EAVLKELVK-TDIAITTALIPGKPAPVLIT--EEMVTKMKPGS--VIIDLAV  152 (183)
T ss_dssp             HHHHHHHTT-CSEEEECCCCTTSCCCCCSC--HHHHTTSCTTC--EEEETTG
T ss_pred             HHHHHHHHh-hhhheeeeecCCcccceeeh--HHHHHhcCCCc--EEEEEee
Confidence            556677787 99999888665443322111  56666666532  3444443

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.24  E-value=0.018  Score=37.70  Aligned_cols=83  Identities=16%  Similarity=0.167  Sum_probs=56.8

Q ss_pred             CeEEEEcCCchHHH-HHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCCC
Q 022495           67 KKIFVAGATGSSGK-RIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus        67 ~~ilVtGa~G~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                      |+|-++|- |++|- .||+.|.++|++|.+.|+.+....+.+.  ..++.+..+.  + .+.    +.+ .|.||...++
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~--~~Gi~i~~gh--~-~~~----i~~-~d~vV~SsAI   70 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR--KLGIPIFVPH--S-ADN----WYD-PDLVIKTPAV   70 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH--HTTCCEESSC--C-TTS----CCC-CSEEEECTTC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH--HCCCeEEeee--c-ccc----cCC-CCEEEEecCc
Confidence            67888885 67775 7899999999999999988755444332  2456665542  2 121    356 8999998887


Q ss_pred             CCCCCCcchhHHHHHHHHHHHcCC
Q 022495          146 QPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       146 ~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                      ..+.         .-+++|++.|+
T Consensus        71 ~~~n---------pel~~A~~~gI   85 (89)
T d1j6ua1          71 RDDN---------PEIVRARMERV   85 (89)
T ss_dssp             CTTC---------HHHHHHHHTTC
T ss_pred             CCCC---------HHHHHHHHcCC
Confidence            5432         24567777776

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.20  E-value=0.025  Score=40.45  Aligned_cols=85  Identities=20%  Similarity=0.219  Sum_probs=55.4

Q ss_pred             CCeEEEEcCC---chHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGAT---GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .|+|.|+|++   +..|..+++.|.+.|++|+.+.-..+.   .     .+...+ -++.       ++-.. +|.++-+
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~---i-----~G~~~~-~sl~-------dlp~~-iD~v~i~   81 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE---V-----LGRKCY-PSVL-------DIPDK-IEVVDLF   81 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---E-----TTEECB-SSGG-------GCSSC-CSEEEEC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc---c-----CCCccc-cccc-------ccCcc-ceEEEEE
Confidence            5799999998   789999999999999998876433211   1     111111 1222       22233 8988877


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEc
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFILIS  176 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~S  176 (296)
                      ..         ......+++.+.+.|++.+++-.
T Consensus        82 vp---------~~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          82 VK---------PKLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             SC---------HHHHHHHHHHHHHHTCSEEEECT
T ss_pred             eC---------HHHHHHHHHHHHHhCCCEEEEec
Confidence            53         22336778888888887666543

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=96.17  E-value=0.021  Score=40.06  Aligned_cols=93  Identities=12%  Similarity=0.140  Sum_probs=61.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHH-CCCeEEEEEc-CcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLA-KGFAVKAGVR-DLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATG  144 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~ag  144 (296)
                      .+|+|.|| |.+|+.+++.+.. .|++++++.. ++.+.....    .++.++.      .+.+.+.....++.++.+..
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I----~Gi~V~~------~~~l~~~~~~~i~iai~~i~   72 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPV----RGGVIEH------VDLLPQRVPGRIEIALLTVP   72 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE----TTEEEEE------GGGHHHHSTTTCCEEEECSC
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE----CCEEEec------HHHHHHHHhhcccEEEEeCC
Confidence            47999996 9999999998754 4688887755 444433333    4566653      23345544444776665542


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccce
Q 022495          145 FQPGWDLFAPWKAINLVEACRKRGVNRFILISSIL  179 (296)
Q Consensus       145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~  179 (296)
                               ....+.+++.+.+.|++.+..++...
T Consensus        73 ---------~~~~~~I~d~l~~~gIk~I~~f~~~~   98 (126)
T d2dt5a2          73 ---------REAAQKAADLLVAAGIKGILNFAPVV   98 (126)
T ss_dssp             ---------HHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred             ---------HHHHHHHHHHHHHcCCCEEeecCcee
Confidence                     22337788899999998888776654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.14  E-value=0.0049  Score=45.48  Aligned_cols=39  Identities=21%  Similarity=0.227  Sum_probs=34.4

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      .++.+|+|+|.|-+.-+|+.++..|.++|++|++.....
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            357899999999999999999999999999999875544

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.0042  Score=46.80  Aligned_cols=36  Identities=28%  Similarity=0.329  Sum_probs=32.9

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      .+.|+|+|+|| |..|...|..|.++|++|+++.+.+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            35789999996 9999999999999999999999875

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.04  E-value=0.0028  Score=44.64  Aligned_cols=36  Identities=25%  Similarity=0.148  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK  102 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~  102 (296)
                      .++++|+|| |+||..+|..|.+.|.+|+++.|.+.-
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            368999996 999999999999999999999987654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.02  E-value=0.0036  Score=47.35  Aligned_cols=35  Identities=20%  Similarity=0.210  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~  101 (296)
                      +|||+|+|| |..|...|..|.++|+ +|+++.|.+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            589999996 9999999999999998 5999888753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.99  E-value=0.0052  Score=42.85  Aligned_cols=35  Identities=17%  Similarity=0.066  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      +++++|.|| |++|..+|..|.+.|.+|.++.|.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            689999996 99999999999999999999988754

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.99  E-value=0.0023  Score=48.74  Aligned_cols=101  Identities=15%  Similarity=0.225  Sum_probs=59.0

Q ss_pred             CCeEEE-EcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cCCCCCeEEEEc---ccCCChHHHHHHh---cCC
Q 022495           66 QKKIFV-AGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SKDNPSLQIVKA---DVTEGSAKLSEAI---GDD  135 (296)
Q Consensus        66 ~~~ilV-tGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~---D~~d~~~~~~~~~---~~~  135 (296)
                      +.+++| +||+|.+|...++.....|.+|+++.|..++.++..   ...... .++.-   |..+..+.+.+..   .+.
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad-~vi~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT-QVITEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS-EEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc-EEEeccccchhHHHHHHHHHHhhccCC
Confidence            556666 599999999999988888999999998876543221   111111 22221   2222112233322   114


Q ss_pred             CCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          136 SEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       136 ~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      +|+++.+.|..         .....++.++..  +++|.++.+
T Consensus       108 vdvv~D~vg~~---------~~~~~~~~l~~~--G~~v~~G~~  139 (189)
T d1gu7a2         108 AKLALNCVGGK---------SSTGIARKLNNN--GLMLTYGGM  139 (189)
T ss_dssp             EEEEEESSCHH---------HHHHHHHTSCTT--CEEEECCCC
T ss_pred             ceEEEECCCcc---------hhhhhhhhhcCC--cEEEEECCc
Confidence            99999987621         113445555444  489987755

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.97  E-value=0.014  Score=41.23  Aligned_cols=30  Identities=23%  Similarity=0.314  Sum_probs=27.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAG   96 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~   96 (296)
                      |+|.|.|++|-.|+.+++.+.++|+++++.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            579999999999999999999999987764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.96  E-value=0.0036  Score=49.02  Aligned_cols=71  Identities=11%  Similarity=0.124  Sum_probs=50.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      .++++++|+|-| -|.+|+++++.|.+.|.+|++.+.+..........  .+..     ..+ .+.   ++..+||+++=
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~--~g~~-----~~~-~~~---~~~~~cDIl~P  102 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE--EGAD-----AVA-PNA---IYGVTCDIFAP  102 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH--HCCE-----ECC-GGG---TTTCCCSEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh--cCCc-----ccC-Ccc---cccccccEecc
Confidence            468899999999 59999999999999999999988887665543321  1111     122 222   23335999998


Q ss_pred             cCC
Q 022495          142 ATG  144 (296)
Q Consensus       142 ~ag  144 (296)
                      ||-
T Consensus       103 cA~  105 (230)
T d1leha1         103 CAL  105 (230)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            885

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.005  Score=45.52  Aligned_cols=90  Identities=21%  Similarity=0.389  Sum_probs=53.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEE-cCcchhh-----hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGV-RDLDKAK-----TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      .++|.|.|++|-+|+.+++.+.+. +.++++.. |.....-     +.......++. +..|       +...+.. +|+
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~-~~~~-------~~~~~~~-~DV   74 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVT-VQSS-------LDAVKDD-FDV   74 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCC-EESC-------STTTTTS-CSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCce-eecc-------HHHHhcc-cce
Confidence            468999999999999999999886 56766543 3322211     11100011111 1222       2334556 999


Q ss_pred             EEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          139 VVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                      +|-..         .+......++.|.+.++ .+|.
T Consensus        75 iIDFs---------~p~~~~~~~~~a~~~~~-~~Vi  100 (162)
T d1diha1          75 FIDFT---------RPEGTLNHLAFCRQHGK-GMVI  100 (162)
T ss_dssp             EEECS---------CHHHHHHHHHHHHHTTC-EEEE
T ss_pred             EEEec---------cHHHHHHHHHHHHhccc-eeEE
Confidence            99764         23333677888888885 4553

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.86  E-value=0.0053  Score=48.60  Aligned_cols=35  Identities=26%  Similarity=0.245  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      .+||+|+|| |..|..+|..|.++|++|+++.|.+.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            578999996 99999999999999999999988754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.83  E-value=0.005  Score=43.41  Aligned_cols=35  Identities=14%  Similarity=0.096  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      .++++|.|| |+||..+|..|.+.|.+|+++.+.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            478999996 99999999999999999999988753

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.82  E-value=0.0054  Score=50.56  Aligned_cols=35  Identities=40%  Similarity=0.425  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      +|+|+|+|| |.-|...|..|.+.|++|.++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            689999996 99999999999999999999987753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.78  E-value=0.0097  Score=43.56  Aligned_cols=70  Identities=19%  Similarity=0.228  Sum_probs=52.2

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      .+.+|+++|.| -|.+|+.+|+.|...|.+|++...+|-++-+..-   .++++         ..+.++++. .|++|-+
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~m---dGf~v---------~~~~~a~~~-aDi~vTa   85 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVM---EGFNV---------VTLDEIVDK-GDFFITC   85 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT---TTCEE---------CCHHHHTTT-CSEEEEC
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHh---cCCcc---------CchhHcccc-CcEEEEc
Confidence            46789999998 6999999999999999999999998865432211   23322         235666777 8999988


Q ss_pred             CCCC
Q 022495          143 TGFQ  146 (296)
Q Consensus       143 ag~~  146 (296)
                      .|..
T Consensus        86 TGn~   89 (163)
T d1v8ba1          86 TGNV   89 (163)
T ss_dssp             CSSS
T ss_pred             CCCC
Confidence            7753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.74  E-value=0.0049  Score=49.62  Aligned_cols=34  Identities=29%  Similarity=0.316  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      +|||+|+|| |.-|...|..|.++|++|+++.+.+
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            489999996 9999999999999999999998754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.68  E-value=0.0051  Score=49.16  Aligned_cols=31  Identities=19%  Similarity=0.089  Sum_probs=29.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|| |.+|..+|.+|+++|.+|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899996 9999999999999999999999864

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.64  E-value=0.0066  Score=49.12  Aligned_cols=36  Identities=22%  Similarity=0.159  Sum_probs=32.6

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      ++++++|+|-|- |.+|+++++.|.+.|++|++++..
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence            578999999995 999999999999999999988764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0083  Score=51.52  Aligned_cols=75  Identities=17%  Similarity=0.234  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcc---hhhhc--cc-------------------CCCCCeEEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD---KAKTT--LS-------------------KDNPSLQIVK  118 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~--~~-------------------~~~~~~~~~~  118 (296)
                      +++.+|||.|+ |++|.++++.|+..|. ++++++.+.-   .+...  +.                   ....++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            45679999997 8899999999999996 7888776531   11110  00                   0224556666


Q ss_pred             cccCCChHHHHHHhcCCCCEEEEcC
Q 022495          119 ADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus       119 ~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      .++.+ ..  ...+++ +|+||.+.
T Consensus       114 ~~i~~-~~--~~~~~~-~DlVi~~~  134 (426)
T d1yovb1         114 NKIQD-FN--DTFYRQ-FHIIVCGL  134 (426)
T ss_dssp             SCGGG-BC--HHHHTT-CSEEEECC
T ss_pred             ccccc-hH--HHHHHh-cchheecc
Confidence            66665 33  356788 99999775

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.56  E-value=0.007  Score=44.80  Aligned_cols=34  Identities=18%  Similarity=0.230  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcCc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRDL  100 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~  100 (296)
                      +|+|+|+|| |++|..+|..|.+.|.  +|+++.+.+
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            789999996 9999999999999874  688877665

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.52  E-value=0.096  Score=36.98  Aligned_cols=30  Identities=27%  Similarity=0.449  Sum_probs=24.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHHC-CCeEEEEE
Q 022495           68 KIFVAGATGSSGKRIVEQLLAK-GFAVKAGV   97 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~   97 (296)
                      ||.|.|++|-+|+.+++.+.+. +.++++..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~   31 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL   31 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            6899999999999999988775 57776544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.52  E-value=0.027  Score=41.68  Aligned_cols=77  Identities=17%  Similarity=0.112  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhhcccCCCCCe-EEEEc-ccCCChHHHHHHhcC-CCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKTTLSKDNPSL-QIVKA-DVTEGSAKLSEAIGD-DSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~-D~~d~~~~~~~~~~~-~~d~vv  140 (296)
                      .+.+|+|+|+ |++|...+..+...|. +|++.++++++.+....   -++ +++.. +-.+..+...+...+ .+|+++
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~---~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vi  103 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV---FGATDFVNPNDHSEPISQVLSKMTNGGVDFSL  103 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH---TTCCEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH---cCCcEEEcCCCcchhHHHHHHhhccCCcceee
Confidence            3679999986 7788888888888875 68888888887764432   222 22221 111112333333322 499999


Q ss_pred             EcCCC
Q 022495          141 CATGF  145 (296)
Q Consensus       141 ~~ag~  145 (296)
                      .+.|.
T Consensus       104 d~~G~  108 (175)
T d1cdoa2         104 ECVGN  108 (175)
T ss_dssp             ECSCC
T ss_pred             eecCC
Confidence            99984

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=95.33  E-value=0.05  Score=42.66  Aligned_cols=37  Identities=22%  Similarity=0.185  Sum_probs=33.0

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      .++++++|+|-| -|.+|+++++.|.+.|++|++++..
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            367899999998 5999999999999999999987754

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.0071  Score=53.50  Aligned_cols=109  Identities=12%  Similarity=0.123  Sum_probs=65.4

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhhh----------------------cccCCCC--CeEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAKT----------------------TLSKDNP--SLQIV  117 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----------------------~~~~~~~--~~~~~  117 (296)
                      .++..+|+|.|+ |++|.++++-|+..|. ++++++.+.-....                      .+...++  +++++
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~  100 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFV  100 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEE
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEE
Confidence            345679999996 8999999999999995 67777654311110                      0111223  33444


Q ss_pred             EcccCCChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceecc
Q 022495          118 KADVTEGSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNG  182 (296)
Q Consensus       118 ~~D~~d~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~  182 (296)
                      ..++.+..+.....+.+ +|+||.+..        .......+-+.|++.++ .+|..++.+.||
T Consensus       101 ~~~~~~~~~~~~~~~~~-~dvVv~~~~--------~~~~~~~l~~~c~~~~i-p~i~~~~~G~~G  155 (529)
T d1yova1         101 EESPENLLDNDPSFFCR-FTVVVATQL--------PESTSLRLADVLWNSQI-PLLICRTYGLVG  155 (529)
T ss_dssp             SSCHHHHHHSCGGGGGG-CSEEEEESC--------CHHHHHHHHHHHHHHTC-CEEEEEEETTEE
T ss_pred             cCCchhhhhhHHHHhcC-CCEEEECCC--------CHHHHHHHHHHHHHcCC-CEEEEeccCCEE
Confidence            44332200111244666 999997742        11222567788888886 688887766554

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.26  E-value=0.045  Score=40.35  Aligned_cols=35  Identities=11%  Similarity=0.266  Sum_probs=26.8

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEE-EcCc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAG-VRDL  100 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~-~r~~  100 (296)
                      +..+|.|.| .|.+|+.+++.|.+. +.+++++ +|++
T Consensus         2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~   38 (170)
T d1f06a1           2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRA   38 (170)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSS
T ss_pred             CcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccc
Confidence            456899998 599999999999875 5676655 4444

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.25  E-value=0.028  Score=39.28  Aligned_cols=75  Identities=19%  Similarity=0.194  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCC----------chHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           65 KQKKIFVAGAT----------GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        65 ~~~~ilVtGa~----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      +.|+|||.|+.          -+.+.+.+++|.+.|++++++.-+|+.......    -..-+...--. .+.+.+++..
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d----~aD~lYfePlt-~e~v~~Ii~~   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE----MADATYIEPIH-WEVVRKIIEK   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG----GSSEEECSCCC-HHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh----hcceeeeecCC-HHHHHHHHHH
Confidence            35899999983          468999999999999999999988876543221    11222222233 5677777654


Q ss_pred             -CCCEEEEcCC
Q 022495          135 -DSEAVVCATG  144 (296)
Q Consensus       135 -~~d~vv~~ag  144 (296)
                       ++|.|+-..|
T Consensus        81 E~pd~il~~~G   91 (127)
T d1a9xa3          81 ERPDAVLPTMG   91 (127)
T ss_dssp             HCCSEEECSSS
T ss_pred             hCcCCeEEEee
Confidence             6999997665

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.96  E-value=0.049  Score=37.51  Aligned_cols=90  Identities=17%  Similarity=0.157  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCc----------hHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-
Q 022495           66 QKKIFVAGATG----------SSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        66 ~~~ilVtGa~G----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      .++|||.|+..          +.|.+.+++|.+.|++++++.-+|+......    .-..-+...--. .+.+.+++.. 
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lYfeplt-~e~v~~Ii~~E   78 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLYFEPVT-LEDVLEIVRIE   78 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEECCCCS-HHHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceEEccCC-HHHHHHHHHHh
Confidence            57999999743          7899999999999999999998887654322    111222222223 5667776644 


Q ss_pred             CCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          135 DSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       135 ~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                      ++|.|+-..|..         ...++...+.+.|+
T Consensus        79 ~p~~ii~~~GGQ---------talnla~~L~~~gv  104 (121)
T d1a9xa4          79 KPKGVIVQYGGQ---------TPLKLARALEAAGV  104 (121)
T ss_dssp             CCSEEECSSSTH---------HHHTTHHHHHHTTC
T ss_pred             CCCEEEeehhhh---------hHHHHHHHHHHcCC
Confidence            599998765531         12455556667775

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.90  E-value=0.011  Score=47.23  Aligned_cols=33  Identities=21%  Similarity=0.266  Sum_probs=30.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|+|| |.-|...|..|.++|++|+++.+.+
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            57999996 9999999999999999999998764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.88  E-value=0.015  Score=43.16  Aligned_cols=34  Identities=18%  Similarity=0.305  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      +++|+|+|| |++|..++..|.+.|.+|.++.+.+
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            578999996 9999999999999998877665554

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.86  E-value=0.017  Score=45.03  Aligned_cols=36  Identities=22%  Similarity=0.463  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      +.++|+|+|| |..|...|..|.++|++|+++.+...
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            4689999996 99999999999999999999987653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.82  E-value=0.014  Score=47.59  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      +.|+|+|+|| |..|...|..|.++|++|+++.+.+
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3579999996 9999999999999999999998764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.64  E-value=0.013  Score=47.14  Aligned_cols=34  Identities=24%  Similarity=0.261  Sum_probs=31.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK  102 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~  102 (296)
                      +|+|.|| |..|..+|..|.++|++|+++.+.+..
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~~   37 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTPD   37 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            6999997 899999999999999999999988643

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.28  E-value=0.013  Score=43.95  Aligned_cols=98  Identities=13%  Similarity=0.184  Sum_probs=53.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcC-cchhhhcccCCCCCeEEE--------EcccCCChHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRD-LDKAKTTLSKDNPSLQIV--------KADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~-~~~~~~~~~~~~~~~~~~--------~~D~~d~~~~~~~~~~~~~  136 (296)
                      -||.|-| .|-||+.+++.|.+++ .+|+++... +......+..........        ...+.- ...+...+.+ +
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~g~~~~~~~~-v   78 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPV-AGTVEDLIKT-S   78 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCC-CCCHHHHHHH-C
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceec-CCchhhhhhc-C
Confidence            4799998 6999999999999875 688877543 322211110011110000        001111 1223444556 9


Q ss_pred             CEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          137 EAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      |+||-|.|....         +.-++...+.| +++|+.++
T Consensus        79 DiViecTG~f~~---------~e~a~~hl~~G-~KvIi~~~  109 (178)
T d1b7go1          79 DIVVDTTPNGVG---------AQYKPIYLQLQ-RNAIFQGG  109 (178)
T ss_dssp             SEEEECCSTTHH---------HHHHHHHHHTT-CEEEECTT
T ss_pred             CEEEECCCCcCC---------HHHHHHHHHcC-CEEEEECC
Confidence            999999985321         22344445667 47777554

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=94.24  E-value=0.021  Score=45.55  Aligned_cols=31  Identities=29%  Similarity=0.175  Sum_probs=28.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|| |..|..+|.+|.++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899996 9999999999999999999998864

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=94.18  E-value=0.15  Score=35.91  Aligned_cols=85  Identities=12%  Similarity=0.021  Sum_probs=51.1

Q ss_pred             CCeEEEEcCC---chHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEc
Q 022495           66 QKKIFVAGAT---GSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCA  142 (296)
Q Consensus        66 ~~~ilVtGa~---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~  142 (296)
                      -|+|.|+|+|   +-.|..+++.|.+.|++++.+.-++.. .+.     .+... .-++.|       +-. ++|.++.+
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~~i-----~g~~~-~~~l~~-------i~~-~iD~v~v~   77 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EEL-----FGEEA-VASLLD-------LKE-PVDILDVF   77 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SEE-----TTEEC-BSSGGG-------CCS-CCSEEEEC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-cee-----eceec-ccchhh-------ccC-CCceEEEe
Confidence            5789999998   569999999999999998865433221 111     11111 112222       112 38888877


Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          143 TGFQPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       143 ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                      ...         .....+++.+.+.|++.+++
T Consensus        78 ~p~---------~~v~~~v~~~~~~g~k~i~~  100 (136)
T d1iuka_          78 RPP---------SALMDHLPEVLALRPGLVWL  100 (136)
T ss_dssp             SCH---------HHHTTTHHHHHHHCCSCEEE
T ss_pred             ccH---------HHHHHHHHHHHhhCCCeEEE
Confidence            531         12234666677778766554

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.98  E-value=0.11  Score=38.34  Aligned_cols=98  Identities=15%  Similarity=0.252  Sum_probs=54.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEE-cCcchhhh-cccCCCCCeEEEEcccCC----------ChHHHHHHh
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGV-RDLDKAKT-TLSKDNPSLQIVKADVTE----------GSAKLSEAI  132 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~-r~~~~~~~-~~~~~~~~~~~~~~D~~d----------~~~~~~~~~  132 (296)
                      |++|.|-| -|-||+.+.+.|.+++ .+|+++. +.+..... ++. .  +...+..+-..          ....+..++
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~   76 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALK-K--GYDLYVAIPERVKLFEKAGIEVAGTVDDML   76 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHH-T--TCCEEESSGGGHHHHHHTTCCCCEEHHHHH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHh-c--CCceEecccccceeecccCcccCCChhHhh
Confidence            46899998 6999999999998876 5666654 33322111 111 1  11221111100          012344456


Q ss_pred             cCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          133 GDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       133 ~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .+ +|+|+-|.|....         +.-++.-.+.|+ ++|++|+.
T Consensus        77 ~~-vDvViEcTG~f~~---------~~~~~~hl~~G~-K~vi~~~~  111 (171)
T d1cf2o1          77 DE-ADIVIDCTPEGIG---------AKNLKMYKEKGI-KAIFQGGE  111 (171)
T ss_dssp             HT-CSEEEECCSTTHH---------HHHHHHHHHTTC-EEEECTTS
T ss_pred             cC-CCEEEEccCCCCC---------HHHHHHHHHcCC-CEEEECCC
Confidence            67 9999999985421         222333445675 67776654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.96  E-value=0.04  Score=39.89  Aligned_cols=36  Identities=17%  Similarity=0.098  Sum_probs=29.8

Q ss_pred             CCeEEEE-cCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVA-GATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVt-Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      ++.++|. .|.|+||..+|..|.++|++|+++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4566665 35699999999999999999999998763

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.90  E-value=0.076  Score=39.18  Aligned_cols=72  Identities=25%  Similarity=0.268  Sum_probs=45.2

Q ss_pred             CCeEEEEcCCchHHHH--HHHHHHHC----CCeEEEEEcCcchhhhcc-------cCCCCCeEEEEcccCCChHHHHHHh
Q 022495           66 QKKIFVAGATGSSGKR--IVEQLLAK----GFAVKAGVRDLDKAKTTL-------SKDNPSLQIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~  132 (296)
                      .+||.|+|| |.+|..  ++..|+..    +.++++.++++++++...       .......++..      ..+..+++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~------~td~~eaL   74 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK------TMNLDDVI   74 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE------ESCHHHHH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE------eCChhhcc
Confidence            469999996 888865  34445543    458999999987654211       01122333222      12256678


Q ss_pred             cCCCCEEEEcCCC
Q 022495          133 GDDSEAVVCATGF  145 (296)
Q Consensus       133 ~~~~d~vv~~ag~  145 (296)
                      ++ +|+||++++.
T Consensus        75 ~d-ad~Vv~~~~~   86 (171)
T d1obba1          75 ID-ADFVINTAMV   86 (171)
T ss_dssp             TT-CSEEEECCCT
T ss_pred             cC-CCeEeeeccc
Confidence            88 9999998764

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.89  E-value=0.038  Score=43.15  Aligned_cols=36  Identities=22%  Similarity=0.183  Sum_probs=30.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHH-CCCeEEEEEcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLA-KGFAVKAGVRD   99 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~~r~   99 (296)
                      ++++++|+|-| .|.+|+++++.|.+ .|..|+.++..
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            56799999998 69999999999975 59999987654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.88  E-value=0.088  Score=38.89  Aligned_cols=98  Identities=18%  Similarity=0.168  Sum_probs=56.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEE-cCcchhhhcccCCCCCeEEEEcccCC----------ChHHHHHHhc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGV-RDLDKAKTTLSKDNPSLQIVKADVTE----------GSAKLSEAIG  133 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~D~~d----------~~~~~~~~~~  133 (296)
                      .++|.|-| -|-||+.+++.|.++. .+|+.+. ..+......+.  ..++..+..+-..          ....+...+.
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK--ELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH--HTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh--hcCceeecccccceeeecccCccccchhhhhhc
Confidence            46899999 5999999999998864 6776654 33332221111  0122233222211          0123444556


Q ss_pred             CCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          134 DDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       134 ~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      + +|+|+-|.|....         ..-++.-.+.|+ +.|++|.
T Consensus        79 ~-vDvViEcTG~f~~---------~~~~~~hl~~G~-k~Vi~s~  111 (172)
T d2czca2          79 K-VDIIVDATPGGIG---------AKNKPLYEKAGV-KAIFQGG  111 (172)
T ss_dssp             T-CSEEEECCSTTHH---------HHHHHHHHHHTC-EEEECTT
T ss_pred             c-CCEEEECCCCCCC---------HHHHHHHHHcCC-CEEEECC
Confidence            7 9999999985421         223344456686 5666665

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.033  Score=43.20  Aligned_cols=74  Identities=4%  Similarity=-0.017  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---------------------cCCCCCeEEEEcccCC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---------------------SKDNPSLQIVKADVTE  123 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------------------~~~~~~~~~~~~D~~d  123 (296)
                      .+.+||..|+..  | ..+..|+++|++|++++-++.......                     .....+++++.+|+.+
T Consensus        45 ~~~rvLd~GCG~--G-~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGK--A-VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTT--C-THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCC--c-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            467999999754  3 357788899999999999886543211                     0123578889999876


Q ss_pred             ChHHHHHHhcCCCCEEEEcCCC
Q 022495          124 GSAKLSEAIGDDSEAVVCATGF  145 (296)
Q Consensus       124 ~~~~~~~~~~~~~d~vv~~ag~  145 (296)
                       ..   ....+..|+|+....+
T Consensus       122 -l~---~~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         122 -LP---RTNIGKFDMIWDRGAL  139 (229)
T ss_dssp             -GG---GSCCCCEEEEEESSST
T ss_pred             -cc---ccccCceeEEEEEEEE
Confidence             22   1112237777765543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=93.86  E-value=0.037  Score=41.34  Aligned_cols=72  Identities=15%  Similarity=0.164  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc---cC-------------CCCCeEEEEcccCCChHHH
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL---SK-------------DNPSLQIVKADVTEGSAKL  128 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~-------------~~~~~~~~~~D~~d~~~~~  128 (296)
                      .+.+||..|+.-+  + .+..|+++|++|++++.++.......   ..             .....+++.+|..+ ....
T Consensus        20 ~~~rvLd~GCG~G--~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-l~~~   95 (201)
T d1pjza_          20 PGARVLVPLCGKS--Q-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA-LTAR   95 (201)
T ss_dssp             TTCEEEETTTCCS--H-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS-STHH
T ss_pred             CCCEEEEecCcCC--H-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccc-cccc
Confidence            4789999997544  3 66688889999999999976443211   10             13456888899887 3322


Q ss_pred             HHHhcCCCCEEEEcC
Q 022495          129 SEAIGDDSEAVVCAT  143 (296)
Q Consensus       129 ~~~~~~~~d~vv~~a  143 (296)
                      .  ... .|.|+...
T Consensus        96 ~--~~~-~D~i~~~~  107 (201)
T d1pjza_          96 D--IGH-CAAFYDRA  107 (201)
T ss_dssp             H--HHS-EEEEEEES
T ss_pred             c--ccc-eeEEEEEe
Confidence            2  123 67776543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=93.85  E-value=0.029  Score=45.33  Aligned_cols=32  Identities=22%  Similarity=0.527  Sum_probs=28.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCc
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL  100 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~  100 (296)
                      .|+|+|| |-+|..+|.+|+++|. +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999996 9999999999999996 699998874

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.83  E-value=0.023  Score=46.12  Aligned_cols=33  Identities=15%  Similarity=0.079  Sum_probs=29.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      ..|+|+|| |.-|..+|+.|.+.|++|.++.++.
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            46899996 9999999999999999999998765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.76  E-value=0.031  Score=43.10  Aligned_cols=31  Identities=19%  Similarity=0.124  Sum_probs=28.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|| |.-|...|..|+++|++|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            799995 9999999999999999999998875

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.62  E-value=0.0063  Score=47.45  Aligned_cols=26  Identities=23%  Similarity=0.290  Sum_probs=23.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAV   93 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V   93 (296)
                      |+|+|+|| |-+|..+|.+|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            58999996 999999999999999764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.61  E-value=0.04  Score=44.62  Aligned_cols=34  Identities=26%  Similarity=0.291  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      .++|+|+|| |.-|...|..|.++|++|+++-.+.
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            468999996 9999999999999999999986543

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.51  E-value=0.043  Score=41.34  Aligned_cols=33  Identities=24%  Similarity=0.254  Sum_probs=27.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDL  100 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~  100 (296)
                      |||+|.|| |++|..+|..|.+.+  .+|+++.|..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999996 999999999998864  5788887754

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.46  E-value=0.042  Score=45.16  Aligned_cols=35  Identities=34%  Similarity=0.294  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC--CeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKG--FAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~  101 (296)
                      +|+|+|+|| |.-|...|..|+++|  ++|+++.|+..
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            689999996 999999999999887  58999988753

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=93.45  E-value=0.055  Score=37.08  Aligned_cols=35  Identities=20%  Similarity=0.186  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHH---CCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLA---KGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~  101 (296)
                      .++++|.|| |++|-.+|..|.+   .|.+|+++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            378999996 9999999987654   4889999988764

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.38  E-value=0.058  Score=38.17  Aligned_cols=35  Identities=23%  Similarity=0.187  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHH----CCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLA----KGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~----~g~~V~~~~r~~~  101 (296)
                      .++++|.|| |++|-.++..|.+    .|.+|+++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            579999986 9999999998863    5899999887654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.34  E-value=0.044  Score=37.69  Aligned_cols=35  Identities=17%  Similarity=0.140  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHH---CCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLA---KGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~  101 (296)
                      .++++|.|| |++|..+|..|.+   +|.+|+++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            478999997 9999999976655   4568999988654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.27  E-value=0.044  Score=37.04  Aligned_cols=38  Identities=16%  Similarity=0.047  Sum_probs=31.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      ++++|+|+|.|+ |.-|..++..|+..+.+|+...|...
T Consensus        29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            457999999995 99999999999988878777777654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.18  E-value=0.044  Score=42.52  Aligned_cols=32  Identities=25%  Similarity=0.312  Sum_probs=28.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCc
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDL  100 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~  100 (296)
                      +|+|+|| |.-|...|..|.++|. +|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            6999996 9999999999999995 799988764

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.02  E-value=0.03  Score=41.61  Aligned_cols=31  Identities=26%  Similarity=0.328  Sum_probs=25.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR   98 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r   98 (296)
                      .+|+|+|| |++|..+|..|.+.|.+|.++.+
T Consensus         4 a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           4 APVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             SSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            46999995 99999999999999977655543

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.85  E-value=0.055  Score=39.32  Aligned_cols=31  Identities=23%  Similarity=0.437  Sum_probs=26.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      ||+|+|| |++|..+|..|. ++.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7899996 999999999885 578999987754

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.85  E-value=0.064  Score=39.55  Aligned_cols=75  Identities=9%  Similarity=-0.051  Sum_probs=42.8

Q ss_pred             CeEEEEcC-CchHHHHHHHHHHHCC----CeEEEEEcCcchh--hhccc-----CCCCCeEEEEcccCCChHHHHHHhcC
Q 022495           67 KKIFVAGA-TGSSGKRIVEQLLAKG----FAVKAGVRDLDKA--KTTLS-----KDNPSLQIVKADVTEGSAKLSEAIGD  134 (296)
Q Consensus        67 ~~ilVtGa-~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~--~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~  134 (296)
                      +||.|+|| +.+.+..++..+....    .++++++++++..  +....     ....+........+|    ..+++++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td----~~~al~g   77 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLD----RRRALDG   77 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESC----HHHHHTT
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCC----chhhcCC
Confidence            58999997 3355555655555432    3788888877542  21110     000122222233344    4566788


Q ss_pred             CCCEEEEcCCCC
Q 022495          135 DSEAVVCATGFQ  146 (296)
Q Consensus       135 ~~d~vv~~ag~~  146 (296)
                       .|+||.+||..
T Consensus        78 -aDvVv~ta~~~   88 (169)
T d1s6ya1          78 -ADFVTTQFRVG   88 (169)
T ss_dssp             -CSEEEECCCTT
T ss_pred             -CCEEEEccccC
Confidence             99999999864

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.84  E-value=0.07  Score=41.96  Aligned_cols=34  Identities=26%  Similarity=0.296  Sum_probs=29.9

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLD  101 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~  101 (296)
                      ++|+|+|| |.-|..+|..|.+.|. +|+++.|.+.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            47999996 9999999999999995 8888888764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.74  E-value=0.063  Score=42.39  Aligned_cols=36  Identities=17%  Similarity=0.135  Sum_probs=32.5

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      ++++++|+|-| -|.+|+++++.|.+.|++|++++..
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            57899999999 5999999999999999999988654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.73  E-value=0.19  Score=36.20  Aligned_cols=36  Identities=22%  Similarity=0.246  Sum_probs=29.1

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT  105 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~  105 (296)
                      ||.++| .|.+|..+++.|++.|+.| +..|+.++..+
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~   37 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALR   37 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHH
Confidence            688998 5999999999999988765 56787765543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=92.38  E-value=0.064  Score=43.46  Aligned_cols=35  Identities=29%  Similarity=0.271  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      .-.|+|+|| |..|...+.+|.++|.+|+++.+.++
T Consensus         7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            346999997 99999999999999999999988754

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=92.20  E-value=0.076  Score=38.62  Aligned_cols=97  Identities=18%  Similarity=0.154  Sum_probs=50.0

Q ss_pred             CCeEEEEcCCchHHHHHH-HHHHHC-CCeEEEE-EcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH--hcCCCCEEE
Q 022495           66 QKKIFVAGATGSSGKRIV-EQLLAK-GFAVKAG-VRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA--IGDDSEAVV  140 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~-~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~~~d~vv  140 (296)
                      ..++.|.| +|++|..+. +.|.+. ..+++++ +|+++.....+. ...++.+...+    .+.+.+.  +.+ +|+||
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a-~~~~i~~~~~~----~d~l~~~~~~~~-iDiVf   76 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARA-QRMGVTTTYAG----VEGLIKLPEFAD-IDFVF   76 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHH-HHTTCCEESSH----HHHHHHSGGGGG-EEEEE
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhh-hhcCCcccccc----eeeeeecccccc-cCEEE
Confidence            45899999 899999754 544333 3567666 566543221111 11233333222    2334332  345 99999


Q ss_pred             EcCCCCCCCCCcchhHH-HHHHHHHHHcCCCEEEEEccc
Q 022495          141 CATGFQPGWDLFAPWKA-INLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~-~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      .+...        .... +..+..+.+.|+ ++|-.|+.
T Consensus        77 ~ATpa--------g~h~~~~~~~~aa~~G~-~VID~s~a  106 (157)
T d1nvmb1          77 DATSA--------SAHVQNEALLRQAKPGI-RLIDLTPA  106 (157)
T ss_dssp             ECSCH--------HHHHHHHHHHHHHCTTC-EEEECSTT
T ss_pred             EcCCc--------hhHHHhHHHHHHHHcCC-EEEEcccc
Confidence            86421        1111 233333445564 67767764

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.01  E-value=0.082  Score=42.95  Aligned_cols=31  Identities=26%  Similarity=0.272  Sum_probs=28.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|| |.-|...|..|.++|++|+++.+..
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789996 9999999999999999999998754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.92  E-value=0.21  Score=37.83  Aligned_cols=74  Identities=18%  Similarity=0.217  Sum_probs=42.7

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh-hcccC------CCCCeEEEE-cccCCChHHHHHHhcC-CCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK-TTLSK------DNPSLQIVK-ADVTEGSAKLSEAIGD-DSE  137 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~------~~~~~~~~~-~D~~d~~~~~~~~~~~-~~d  137 (296)
                      |+|+|.| ++..|..+.+.|++.|++|.++.-.+++.. .....      ...++.++. .|+.+ .+ +.+.+.. .+|
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~-~~-~~~~i~~~~~D   77 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNH-PL-WVERIAQLSPD   77 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCS-HH-HHHHHHHTCCS
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccc-hh-hhhhhhhhccc
Confidence            5788886 577899999999999999876653322211 00000      112455544 45555 44 3333332 589


Q ss_pred             EEEEcC
Q 022495          138 AVVCAT  143 (296)
Q Consensus       138 ~vv~~a  143 (296)
                      .+|...
T Consensus        78 lii~~g   83 (203)
T d2blna2          78 VIFSFY   83 (203)
T ss_dssp             EEEEES
T ss_pred             ceeeee
Confidence            887654

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.78  E-value=0.0081  Score=44.36  Aligned_cols=72  Identities=21%  Similarity=0.110  Sum_probs=43.1

Q ss_pred             CeEEEEcCCchHHHHHHHH-HHHC-----CCeEEEEEcCcchhhhcccC----CCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           67 KKIFVAGATGSSGKRIVEQ-LLAK-----GFAVKAGVRDLDKAKTTLSK----DNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~-L~~~-----g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      |||.|+|| |.+|...+-. |++.     +.++++.+.++++.......    ......+...  ++    ..+.+++ .
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t--~~----~~~~l~~-a   72 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS--DT----FEGAVVD-A   72 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC--SS----HHHHHTT-C
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe--cC----cccccCC-C
Confidence            58999998 5567665533 3321     35899999988775532110    0122222221  12    3566788 9


Q ss_pred             CEEEEcCCCC
Q 022495          137 EAVVCATGFQ  146 (296)
Q Consensus       137 d~vv~~ag~~  146 (296)
                      |+||..||..
T Consensus        73 DvVVita~~~   82 (162)
T d1up7a1          73 KYVIFQFRPG   82 (162)
T ss_dssp             SEEEECCCTT
T ss_pred             CEEEEecccC
Confidence            9999999864

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.61  E-value=0.11  Score=37.42  Aligned_cols=34  Identities=29%  Similarity=0.360  Sum_probs=27.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRD   99 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~   99 (296)
                      ||+|.|.|+||.||.....-+.+.  .++|+++.-.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            578999999999999999888775  4788887543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.28  Score=39.32  Aligned_cols=33  Identities=24%  Similarity=0.301  Sum_probs=27.1

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      +++=--.||..|.++|++|+.+|++|+++.+..
T Consensus        38 R~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          38 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             eEeCCCCchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            334444689999999999999999999997764

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.53  E-value=0.094  Score=40.69  Aligned_cols=32  Identities=22%  Similarity=0.182  Sum_probs=29.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      |+|+|| |..|...|..|.++|++|+++.+.+.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            899996 99999999999999999999988753

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.31  E-value=0.18  Score=36.87  Aligned_cols=73  Identities=22%  Similarity=0.243  Sum_probs=43.4

Q ss_pred             CCeEEEEcCCchHHHH-HHHHHHHC-----CCeEEEEEcCcchhhhc---cc----CCCCCeEEEEcccCCChHHHHHHh
Q 022495           66 QKKIFVAGATGSSGKR-IVEQLLAK-----GFAVKAGVRDLDKAKTT---LS----KDNPSLQIVKADVTEGSAKLSEAI  132 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~---~~----~~~~~~~~~~~D~~d~~~~~~~~~  132 (296)
                      ..||.|+|| |.+|.. ++..|+.+     +.++++.+.++++++..   ..    .......+..      ..+..+++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~eal   75 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA------TTDPEEAF   75 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE------ESCHHHHH
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe------cCChhhcc
Confidence            458999998 445543 44555543     24799999998776521   10    0112222221      11246667


Q ss_pred             cCCCCEEEEcCCCC
Q 022495          133 GDDSEAVVCATGFQ  146 (296)
Q Consensus       133 ~~~~d~vv~~ag~~  146 (296)
                      ++ .|+||..+|..
T Consensus        76 ~~-AD~Vvitag~~   88 (167)
T d1u8xx1          76 TD-VDFVMAHIRVG   88 (167)
T ss_dssp             SS-CSEEEECCCTT
T ss_pred             CC-CCEEEECCCcC
Confidence            88 99999999864

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.14  E-value=0.34  Score=34.96  Aligned_cols=112  Identities=10%  Similarity=0.122  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC-cchhhhcccCCC--CCeEEEEcccCCChHHHHHHh----cC-CC
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD-LDKAKTTLSKDN--PSLQIVKADVTEGSAKLSEAI----GD-DS  136 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~----~~-~~  136 (296)
                      +|+++.|++.+|+.|--++..+.+.|.++--+... .+++.+.+....  .+-.-+.++. + .+.+.+++    +. .+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~-~-~~~~~~~l~~~~~d~~v   79 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASA-R-GEDYYRTAKLLLQDPNV   79 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTC-C-HHHHHHHHHHHHHSTTC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCCCHHHHHHHHHhCCCcccCCCcccccCCC-C-HHHHHHHHHHHHcCCCc
Confidence            47889999999999999999999999776543221 223334443110  1111122222 2 34444433    32 48


Q ss_pred             CEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccc
Q 022495          137 EAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSI  178 (296)
Q Consensus       137 d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~  178 (296)
                      |.|+...................+++.+++.+.++-|+++.+
T Consensus        80 d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpv~~~~~  121 (163)
T d2csua3          80 DMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFM  121 (163)
T ss_dssp             SEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEE
T ss_pred             CEEEEeeccCCcccccHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            877643322222222222233667777777664444444433

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.08  E-value=0.17  Score=38.18  Aligned_cols=95  Identities=15%  Similarity=0.119  Sum_probs=56.9

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      .++.|++||=.|++.|+   ++-.++..| .+|++++.++........ ...++.++.+|+.+ .+       +++|+||
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~-N~~~~~~~~~D~~~-l~-------~~fD~Vi  112 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKR-NCGGVNFMVADVSE-IS-------GKYDTWI  112 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHH-HCTTSEEEECCGGG-CC-------CCEEEEE
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHH-ccccccEEEEehhh-cC-------CcceEEE
Confidence            46789999988754432   223455677 469999998765543222 34678999999877 32       3499999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                      .|-.+.......+    ..+++.+.+.+  .+||
T Consensus       113 ~NPPfg~~~~~~D----~~fl~~a~~~~--~~iy  140 (197)
T d1ne2a_         113 MNPPFGSVVKHSD----RAFIDKAFETS--MWIY  140 (197)
T ss_dssp             ECCCC-------C----HHHHHHHHHHE--EEEE
T ss_pred             eCcccchhhhhch----HHHHHHHHhcC--CeEE
Confidence            8854321111111    45566665543  4555

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.06  E-value=0.17  Score=36.48  Aligned_cols=34  Identities=24%  Similarity=0.193  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCe-EEEEEcCc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFA-VKAGVRDL  100 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~  100 (296)
                      +++|+|+|| |.+|...|..+++.|++ |+++.|.+
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            568999986 99999999999999965 77777754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.78  E-value=0.21  Score=38.88  Aligned_cols=36  Identities=25%  Similarity=0.374  Sum_probs=30.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcC
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRD   99 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~   99 (296)
                      ++++++|+|-|- |.+|+++++.|.+. |..|+.+...
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            478999999995 99999999999864 8998887654

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=90.54  E-value=0.35  Score=35.80  Aligned_cols=72  Identities=17%  Similarity=0.218  Sum_probs=48.6

Q ss_pred             CCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCCCC
Q 022495           74 ATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQP  147 (296)
Q Consensus        74 a~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~~~  147 (296)
                      ||=|-|.| .+.+++++.+|++++|+++...........++.++..+..+ .+.....+.- ++|.|+.-.|+..
T Consensus        25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~-~~~~l~~~~~~~vdgIl~DLGvSs   97 (182)
T d1wg8a2          25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRH-LKRHLAALGVERVDGILADLGVSS   97 (182)
T ss_dssp             TTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGG-HHHHHHHTTCSCEEEEEEECSCCH
T ss_pred             eCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhccccceeEeehHHHH-HHHHHHHcCCCccCEEEEEccCCH
Confidence            34444445 45566777799999999976543222245789999999988 6655544322 4999998888754

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.40  E-value=0.15  Score=39.56  Aligned_cols=70  Identities=16%  Similarity=0.205  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh---hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +.++||=.|++.  |. ++..|+++|++|++++.++.-..   +.....+.+++++.+|+.+ .+     +.++.|.|+.
T Consensus        41 ~~~~iLDiGcGt--G~-~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~-l~-----~~~~fD~I~~  111 (251)
T d1wzna1          41 EVRRVLDLACGT--GI-PTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-----FKNEFDAVTM  111 (251)
T ss_dssp             CCCEEEEETCTT--CH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-----CCSCEEEEEE
T ss_pred             CCCEEEEeCCCC--Cc-cchhhcccceEEEEEeeccccccccccccccccccchheehhhhh-cc-----cccccchHhh
Confidence            357899998654  33 45568889999999999875433   2222234579999999987 32     2224898886


Q ss_pred             cC
Q 022495          142 AT  143 (296)
Q Consensus       142 ~a  143 (296)
                      .-
T Consensus       112 ~~  113 (251)
T d1wzna1         112 FF  113 (251)
T ss_dssp             CS
T ss_pred             hh
Confidence            53

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=90.33  E-value=0.15  Score=36.53  Aligned_cols=34  Identities=26%  Similarity=0.379  Sum_probs=27.9

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRD   99 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~   99 (296)
                      .|+|.|.|+||-||....+-+.+.  .++|++++-.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            479999999999999998888764  4788887543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=90.05  E-value=0.15  Score=40.98  Aligned_cols=31  Identities=19%  Similarity=0.221  Sum_probs=28.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|| |..|...|.+|.++|.+|+++.+.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            899996 9999999999999999999998765

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=89.89  E-value=0.16  Score=39.57  Aligned_cols=34  Identities=24%  Similarity=0.192  Sum_probs=30.6

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcch
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDK  102 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~  102 (296)
                      -|+|+|| |.-|...|.+|.++|.+|.++.+.+..
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~   39 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI   39 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence            4899996 999999999999999999999988643

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=89.74  E-value=0.074  Score=41.45  Aligned_cols=100  Identities=10%  Similarity=0.027  Sum_probs=60.6

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh---hcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ...++||=.|++.|.   ++..|+++|.+|++++.++.-+.   +.......+++++.+|+.+ .+     +.+++|+|+
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~-~~-----~~~~fD~i~  106 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN-LN-----INRKFDLIT  106 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG-CC-----CSCCEEEEE
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhh-hc-----ccccccccc
Confidence            346789999876543   66678889999999998876433   2122234579999999987 33     222489999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHc--CCCEEEE
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKR--GVNRFIL  174 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~--~~~~iV~  174 (296)
                      ...+......  .......+++.+.+.  .-+.||+
T Consensus       107 ~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         107 CCLDSTNYII--DSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             ECTTGGGGCC--SHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eeeeeeeccC--CHHHHHHHHHHHHHhCCCCeEEEE
Confidence            7543222111  122225556655543  1246664

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=89.52  E-value=0.45  Score=39.07  Aligned_cols=127  Identities=11%  Similarity=0.079  Sum_probs=76.6

Q ss_pred             CCeEE-EEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc----cCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           66 QKKIF-VAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL----SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        66 ~~~il-VtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      +.+|+ ..+|+|.+|..++    +++.+|+++..+++......    ...-.++.++.+|+.+.......... ++|+||
T Consensus       213 ~~~vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~-~~d~vi  287 (358)
T d1uwva2         213 EDRVLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKN-GFDKVL  287 (358)
T ss_dssp             TCEEEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTT-CCSEEE
T ss_pred             CceEEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhc-cCceEE
Confidence            34444 7799999998765    46789999998876544322    11336799999998762111222223 389998


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEccceeccCccCccCChhhhhhhhhHHHHHHHHHHHHHHHHhCCcE
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINY  220 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~  220 (296)
                      -.-.  +...       ..+++.+.+.+.++|||+|--            +       .+   ..+ -+. .+.+.|.+.
T Consensus       288 lDPP--R~G~-------~~~~~~l~~~~~~~ivYVSCn------------p-------~T---laR-Dl~-~l~~~gy~l  334 (358)
T d1uwva2         288 LDPA--RAGA-------AGVMQQIIKLEPIRIVYVSCN------------P-------AT---LAR-DSE-ALLKAGYTI  334 (358)
T ss_dssp             ECCC--TTCC-------HHHHHHHHHHCCSEEEEEESC------------H-------HH---HHH-HHH-HHHHTTCEE
T ss_pred             eCCC--CccH-------HHHHHHHHHcCCCEEEEEeCC------------H-------HH---HHH-HHH-HHHHCCCeE
Confidence            6632  1111       235566666678899999842            1       11   111 112 233668888


Q ss_pred             EEEecCcccC
Q 022495          221 TIIRPGGLRN  230 (296)
Q Consensus       221 ~~lrp~~i~g  230 (296)
                      .-++|-.+|-
T Consensus       335 ~~i~~~D~FP  344 (358)
T d1uwva2         335 ARLAMLDMFP  344 (358)
T ss_dssp             EEEEEECCST
T ss_pred             eEEEEEecCC
Confidence            8888876653

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=89.33  E-value=0.2  Score=39.66  Aligned_cols=33  Identities=21%  Similarity=0.307  Sum_probs=29.4

Q ss_pred             eEEEEcCCchHHHHHHHHHHHC-CCeEEEEEcCcc
Q 022495           68 KIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLD  101 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~  101 (296)
                      -|+|+|| |.-|...|..|+++ |++|.++.+.+.
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            4999997 99999999999885 999999998763

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=89.19  E-value=0.19  Score=41.30  Aligned_cols=30  Identities=20%  Similarity=0.071  Sum_probs=27.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      |+|+| +|+-|..+|..|.++|++|.++-+-
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            78998 5999999999999999999999873

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=89.00  E-value=0.099  Score=38.18  Aligned_cols=39  Identities=18%  Similarity=0.152  Sum_probs=27.1

Q ss_pred             CeEEEEcCCchHHHH-HHHHHHHC-CCeEEEEEcCcchhhhc
Q 022495           67 KKIFVAGATGSSGKR-IVEQLLAK-GFAVKAGVRDLDKAKTT  106 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~  106 (296)
                      ++|.|+|+ |.+|.. ....|.+. +.++++.++++++....
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~   42 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTL   42 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHH
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHH
Confidence            57999985 888976 45556554 46777777877665543

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.98  E-value=0.25  Score=37.53  Aligned_cols=38  Identities=24%  Similarity=0.268  Sum_probs=33.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      ++++|+|+|+| +|.-|..+|.+|.+.+.+++.+.|...
T Consensus        29 ~~~gK~V~VvG-~G~Sa~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          29 DFSGQRVGVIG-TGSSGIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCCEEEEEC-CCccHHHHHHHHHhhhccccccccccc
Confidence            45799999998 599999999999999999998888764

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=88.94  E-value=0.17  Score=41.13  Aligned_cols=33  Identities=21%  Similarity=0.313  Sum_probs=28.5

Q ss_pred             EEEEcCCchHHHHHHHHHHH-----CCCeEEEEEcCcch
Q 022495           69 IFVAGATGSSGKRIVEQLLA-----KGFAVKAGVRDLDK  102 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~-----~g~~V~~~~r~~~~  102 (296)
                      |+|+|| |-.|..+|..|++     +|++|+++.|.+..
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~   47 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK   47 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence            899997 9999999999974     69999999987643

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.88  E-value=0.27  Score=35.50  Aligned_cols=66  Identities=18%  Similarity=0.209  Sum_probs=39.0

Q ss_pred             CeEEEEcCCchHHHH-HHHHHHHC-CCeEEEE-EcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEEcC
Q 022495           67 KKIFVAGATGSSGKR-IVEQLLAK-GFAVKAG-VRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCAT  143 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~-l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~~a  143 (296)
                      ++|.|+| +|.+|.. ....|... +.+++++ ++++++..+.....  ++     +..+   .+.++.++ +|+|+-+.
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~--~~-----~~~~---~~~~l~~~-~D~V~I~t   69 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW--RI-----PYAD---SLSSLAAS-CDAVFVHS   69 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH--TC-----CBCS---SHHHHHTT-CSEEEECS
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc--cc-----cccc---cchhhhhh-cccccccc
Confidence            5799999 5999975 45556554 6777655 56666554433211  11     2233   23444567 99988775


Q ss_pred             C
Q 022495          144 G  144 (296)
Q Consensus       144 g  144 (296)
                      .
T Consensus        70 p   70 (164)
T d1tlta1          70 S   70 (164)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.78  E-value=0.25  Score=37.32  Aligned_cols=30  Identities=17%  Similarity=0.155  Sum_probs=27.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      ++|+|| |..|...+..+.+.|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789996 999999999999999999998875

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.70  E-value=0.22  Score=37.98  Aligned_cols=34  Identities=26%  Similarity=0.328  Sum_probs=29.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC--CCeEEEEEcCcc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK--GFAVKAGVRDLD  101 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~  101 (296)
                      ++|.|+|| |.-|...|..|.++  |++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            48999996 99999999999875  789999988753

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=88.70  E-value=0.53  Score=38.09  Aligned_cols=76  Identities=11%  Similarity=0.054  Sum_probs=47.4

Q ss_pred             CCCCeEE-EEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhccc----CCCCCeEEEEcccCCChHH-HHHHhcCCCC
Q 022495           64 VKQKKIF-VAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLS----KDNPSLQIVKADVTEGSAK-LSEAIGDDSE  137 (296)
Q Consensus        64 ~~~~~il-VtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~-~~~~~~~~~d  137 (296)
                      .++++|| +..|+|+.+.+++    ..+.+|++++.++........    ..-.+++++.+|..| ... +...-+ ++|
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~a----~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~-~~~~~~~~~~-~fD  217 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHLA----LGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD-LLRRLEKEGE-RFD  217 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHHH----HHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH-HHHHHHHTTC-CEE
T ss_pred             hCCCeeeccCCCCcHHHHHHH----hcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH-HhhhhHhhhc-CCC
Confidence            4677888 4556676665443    346789999999865542211    122478999999876 322 222112 599


Q ss_pred             EEEEcCCC
Q 022495          138 AVVCATGF  145 (296)
Q Consensus       138 ~vv~~ag~  145 (296)
                      .||.....
T Consensus       218 ~Vi~DpP~  225 (318)
T d1wxxa2         218 LVVLDPPA  225 (318)
T ss_dssp             EEEECCCC
T ss_pred             EEEEcCCc
Confidence            99988653

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=88.58  E-value=0.32  Score=36.40  Aligned_cols=73  Identities=15%  Similarity=0.227  Sum_probs=52.7

Q ss_pred             EEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh---hcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEEEEcCCCC
Q 022495           71 VAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAVVCATGFQ  146 (296)
Q Consensus        71 VtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~~ag~~  146 (296)
                      +|.|+|+.-.++.+.+ . +.+|++++++++...   +.+.....++.++.++..+ .+.+...+.. ++|.|+.-.|+.
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~-~~~~~~~~~~~~vdgIl~DlGvS  106 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYRE-ADFLLKTLGIEKVDGILMDLGVS  106 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGG-HHHHHHHTTCSCEEEEEEECSCC
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhh-HHHHHHHcCCCCcceeeeccchh
Confidence            6777888777777765 2 468999999987544   2222235689999999988 6666555432 499999888874

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.52  E-value=0.19  Score=38.49  Aligned_cols=34  Identities=26%  Similarity=0.291  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCchHHH-----HHHHHHHHCCCeEEEEEcC
Q 022495           66 QKKIFVAGATGSSGK-----RIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~-----~l~~~L~~~g~~V~~~~r~   99 (296)
                      +|.|.|+|+-|++|+     .++..|.++|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            678999999999998     5667777899999999865

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=88.51  E-value=2.4  Score=28.50  Aligned_cols=35  Identities=34%  Similarity=0.395  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      +.+|+|-|-||..|+.-++.+++-|-+|++-....
T Consensus         6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPg   40 (119)
T d2nu7a1           6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPG   40 (119)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccC
Confidence            46899999999999999999999999998855543

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=88.49  E-value=1.2  Score=36.14  Aligned_cols=103  Identities=11%  Similarity=0.161  Sum_probs=61.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEccc------CCChHHHHHHhcC-CCCE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADV------TEGSAKLSEAIGD-DSEA  138 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~------~d~~~~~~~~~~~-~~d~  138 (296)
                      ...|+||.|+...=..++..|++.|..|++.+=.-..........+.++..+..|.      .| .+.+.+.+.+ +...
T Consensus        58 ~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d-~~~~~~~~~~~~~~~  136 (361)
T d1d2fa_          58 SQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCD-MGKLEAVLAKPECKI  136 (361)
T ss_dssp             GGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECC-HHHHHHHHTSTTEEE
T ss_pred             cceEEEeCCHHHHHHHHhhhccccccccccccccccchhHHHHhhcceEEeecccccccccccc-cccchhhcccCCcee
Confidence            34799998877777778888888898888765443333332222333444444443      24 5677777755 3556


Q ss_pred             EEEcCCCCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          139 VVCATGFQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                      ++.+..-.+..........+.+++.|++.++
T Consensus       137 i~l~~p~NPTG~~~s~~~~~~i~~~~~~~~~  167 (361)
T d1d2fa_         137 MLLCSPQNPTGKVWTCDELEIMADLCERHGV  167 (361)
T ss_dssp             EEEESSCTTTCCCCCTTHHHHHHHHHHHTTC
T ss_pred             EEecccccccccccchhhhhhhhhhhhhhhe
Confidence            6654332222223333344788999988875

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=88.38  E-value=0.28  Score=39.56  Aligned_cols=34  Identities=26%  Similarity=0.409  Sum_probs=23.3

Q ss_pred             CeEEEEcC-C-chH--HHHHHHHHHHCCCeEEEEEcCc
Q 022495           67 KKIFVAGA-T-GSS--GKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        67 ~~ilVtGa-~-G~i--G~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |||+|++| | |.+  ..+|+++|.++|++|..+....
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            56777764 3 222  3358899999999998876543

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=88.29  E-value=0.16  Score=37.72  Aligned_cols=34  Identities=12%  Similarity=0.098  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      ++.|+|+|| |..|..-|..|.+.|.+|+++.+..
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            568999997 9999999999999999999987654

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.99  E-value=0.77  Score=34.64  Aligned_cols=94  Identities=24%  Similarity=0.314  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCC---eEEEEEcCcchhhhcccCCCCCeEEEEcc-c------------------CC
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSKDNPSLQIVKAD-V------------------TE  123 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-~------------------~d  123 (296)
                      ..+|.|+|- |+-|..++..|.+.|.   +.+++.-+...+....    ....+..+. +                  .+
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~----~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~   89 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTK----ADKKILIGKKLTRGLGAGGNPKIGEEAAKES   89 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSC----CSEEEECCTTTTTTBCCTTCHHHHHHHHHHT
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCC----cchhcccccccccccccccchHHHHHHHHHH
Confidence            468999995 9999999999999874   3455554444333211    112221111 1                  12


Q ss_pred             ChHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          124 GSAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       124 ~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                       .+.+.+.+++ .|.||-+||.-.....   -..--+.+.+++.+.
T Consensus        90 -~~~I~~~l~~-~d~vfi~AGlGGGTGs---gaapvia~~ake~g~  130 (209)
T d2vapa1          90 -AEEIKAAIQD-SDMVFITCGLGGGTGT---GSAPVVAEISKKIGA  130 (209)
T ss_dssp             -HHHHHHHHTT-CSEEEEEEETTSSHHH---HHHHHHHHHHHHTTC
T ss_pred             -HHHHHHhccC-CCEEEEEEeCCCCccc---cHHHHHHHHHHHcCC
Confidence             3578888898 9999999987554211   111457788888885

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=87.96  E-value=0.16  Score=39.96  Aligned_cols=35  Identities=23%  Similarity=0.300  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCchHHHH-----HHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGKR-----IVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~-----l~~~L~~~g~~V~~~~r~~~  101 (296)
                      ||+|.|+| =||+|+.     |+..|++.|++|.++|-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            47899998 8999984     55688889999999999874

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=87.77  E-value=0.28  Score=40.94  Aligned_cols=32  Identities=25%  Similarity=0.280  Sum_probs=24.6

Q ss_pred             CeEEEEcC------CchHH---HHHHHHHHHCCCeEEEEEc
Q 022495           67 KKIFVAGA------TGSSG---KRIVEQLLAKGFAVKAGVR   98 (296)
Q Consensus        67 ~~ilVtGa------~G~iG---~~l~~~L~~~g~~V~~~~r   98 (296)
                      ||||+++.      +||+|   ..|+++|.++|++|+++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            56777664      47776   5679999999999998863

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.70  E-value=1.1  Score=36.84  Aligned_cols=102  Identities=10%  Similarity=0.037  Sum_probs=57.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEccc-----CCChHHHHHHhcCCCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADV-----TEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~~~~~d~vv~  141 (296)
                      ..|++|.|+...=..+...|++.|..|.+..=.-..........+.++..+..|-     -| .+.+++.+.++...++.
T Consensus        87 ~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~~~~~~~~i~~  165 (388)
T d1gdea_          87 TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLN-VDELKKYVTDKTRALII  165 (388)
T ss_dssp             TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCC-HHHHHHHCCTTEEEEEE
T ss_pred             heeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCC-HHHHHHhCccCCeEEEE
Confidence            4588887766555666677888887776543322222221111223444444432     24 57788777664556666


Q ss_pred             cCCCCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          142 ATGFQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       142 ~ag~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                      |..-.+..........+.+++.|+++++
T Consensus       166 ~~P~NPtG~~~s~~~~~~l~~~a~~~~~  193 (388)
T d1gdea_         166 NSPCNPTGAVLTKKDLEEIADFVVEHDL  193 (388)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred             CCCcCCCCCcCCHHHHHHHHHHHHHcCC
Confidence            5433333333444455888898888764

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=87.61  E-value=1.1  Score=33.29  Aligned_cols=93  Identities=20%  Similarity=0.348  Sum_probs=58.8

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC---eEEEEEcCcchhhhcccCCCCCeEEEEc-cc------------------CCC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSKDNPSLQIVKA-DV------------------TEG  124 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~------------------~d~  124 (296)
                      +||.|+|- |+-|..++..|.+.|.   +.+++.-+...+....    ....+..+ ++                  .+ 
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~----a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~-   74 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASN----ADVKIQIGENITRGLGAGGRPEIGEQAALES-   74 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCC----CSEEEECCTTTTTTSCCTTCHHHHHHHHHHT-
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCC----cceEEecccccCCCcccccCchhhHhHHHHH-
Confidence            37899985 9999999999999763   4455555544433211    12222222 11                  11 


Q ss_pred             hHHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          125 SAKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       125 ~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                      .+.+.+.+++ .|.||-+||.-.....   -..--+.+.+++.+.
T Consensus        75 ~~~I~~~l~~-~d~vfi~AGlGGgTGt---gaapviA~~ake~g~  115 (194)
T d1w5fa1          75 EEKIREVLQD-THMVFITAGFGGGTGT---GASPVIAKIAKEMGI  115 (194)
T ss_dssp             HHHHHHHTTT-CSEEEEEEETTSSHHH---HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhcC-CCeEEEEEecCCCccc---chHHHHHHHHHHcCC
Confidence            4678888888 9999999987553211   111457888889885

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.56  E-value=0.19  Score=38.42  Aligned_cols=36  Identities=28%  Similarity=0.335  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCchHHH-----HHHHHHHHCCCeEEEEEcCcc
Q 022495           66 QKKIFVAGATGSSGK-----RIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~-----~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      +|.|.|+++-||+|.     ++|..|.++|.+|.+++-++.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            478999999999997     566778889999999987754

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.44  E-value=0.13  Score=37.15  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=26.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKA   95 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~   95 (296)
                      .+++|+|+|| |++|..+|..|.+.|.+++.
T Consensus        28 ~gkrVvVIGg-G~~g~d~a~~~~r~G~~~~~   57 (162)
T d1ps9a2          28 VGNKVAIIGC-GGIGFDTAMYLSQPGESTSQ   57 (162)
T ss_dssp             CCSEEEEECC-HHHHHHHHHHHTCCSSCGGG
T ss_pred             cCCceEEEcC-chhHHHHHHHHHHcCCccce
Confidence            4789999997 99999999999999976543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.24  E-value=0.89  Score=36.43  Aligned_cols=108  Identities=10%  Similarity=-0.021  Sum_probs=59.8

Q ss_pred             CCCCeEEEEcCCchHHHHHHHHHHHCCC-eEEEEEcCcchhh--h--cccCCCCCeEEEEcccCCChHHHHHHhcCCCCE
Q 022495           64 VKQKKIFVAGATGSSGKRIVEQLLAKGF-AVKAGVRDLDKAK--T--TLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEA  138 (296)
Q Consensus        64 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--~--~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~  138 (296)
                      .++++||-.|++.|+   ++..++++|. +|++++.++.-..  +  .......++.++.+|+.+ ...   -.. ++|+
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~-l~~---~~~-~~D~  105 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE-VHL---PVE-KVDV  105 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT-SCC---SCS-CEEE
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHH-hcC---ccc-cceE
Confidence            468999999865433   4455667785 7999988864321  1  112245689999999987 321   112 4899


Q ss_pred             EEEcCCCCCCCCCcchhHHHHHHHHHHHc-CCCEEEEEccceecc
Q 022495          139 VVCATGFQPGWDLFAPWKAINLVEACRKR-GVNRFILISSILVNG  182 (296)
Q Consensus       139 vv~~ag~~~~~~~~~~~~~~~~l~~~~~~-~~~~iV~~SS~~~~~  182 (296)
                      |+..-- .......  .....++++..+. ..+-.++.++..+|.
T Consensus       106 Ivse~~-~~~~~~e--~~~~~~~~a~~~~Lkp~G~iip~~~~~~~  147 (311)
T d2fyta1         106 IISEWM-GYFLLFE--SMLDSVLYAKNKYLAKGGSVYPDICTISL  147 (311)
T ss_dssp             EEECCC-BTTBTTT--CHHHHHHHHHHHHEEEEEEEESCEEEEEE
T ss_pred             EEEeee-eeecccc--cccHHHHHHHHhcCCCCcEEeccccceEE
Confidence            986421 1111111  1113444444331 223456666666664

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=87.18  E-value=0.27  Score=39.70  Aligned_cols=32  Identities=16%  Similarity=0.166  Sum_probs=29.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~  101 (296)
                      |+|+|| |..|...|..|+++|.+|+++.+.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~~   57 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEPI   57 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            899995 99999999999999999999987653

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=87.10  E-value=1.2  Score=33.33  Aligned_cols=76  Identities=17%  Similarity=0.292  Sum_probs=44.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh---hccc-------CCCCCeEEEEcccCCChHHHHHHhcC-
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTLS-------KDNPSLQIVKADVTEGSAKLSEAIGD-  134 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~-------~~~~~~~~~~~D~~d~~~~~~~~~~~-  134 (296)
                      .|+|+++| ++..+..+.+.|++.|++|.++.-.+++..   ....       ....++.+...+..+ .+...+.++. 
T Consensus         3 ~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   80 (206)
T d1fmta2           3 SLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLR-PQENQQLVAEL   80 (206)
T ss_dssp             CCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSC-SHHHHHHHHHT
T ss_pred             CcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCcccccccccc-chhhHHHHhhh
Confidence            47899997 578899999999999999776653332211   0000       011345555555444 4445555543 


Q ss_pred             CCCEEEEcC
Q 022495          135 DSEAVVCAT  143 (296)
Q Consensus       135 ~~d~vv~~a  143 (296)
                      .+|.+|.+.
T Consensus        81 ~~d~~v~~~   89 (206)
T d1fmta2          81 QADVMVVVA   89 (206)
T ss_dssp             TCSEEEEES
T ss_pred             cceEEEeec
Confidence            488777543

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.89  E-value=0.43  Score=36.52  Aligned_cols=39  Identities=15%  Similarity=0.078  Sum_probs=31.5

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHC--------------------C-CeEEEEEcCcc
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAK--------------------G-FAVKAGVRDLD  101 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~--------------------g-~~V~~~~r~~~  101 (296)
                      .++++++|+|+|+ |.++.-+|+.|++.                    | .+|+++.|...
T Consensus        35 ~~~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~   94 (225)
T d1cjca1          35 PDLSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP   94 (225)
T ss_dssp             CCTTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred             ccccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence            4567899999995 99999999999973                    5 46888877653

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.85  E-value=0.35  Score=36.43  Aligned_cols=31  Identities=16%  Similarity=0.231  Sum_probs=28.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      ++|+|| |..|...|..+.+.|.+|+++.+..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            799997 9999999999999999999988754

>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.83  E-value=1.5  Score=35.70  Aligned_cols=80  Identities=13%  Similarity=0.018  Sum_probs=52.7

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcccCCC--hHHHHHHhcCCCCEEE
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEG--SAKLSEAIGDDSEAVV  140 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~d~vv  140 (296)
                      +|++-+|+=.+ ...-|-...+.|++.|++|+=+-+........+...+.+-..+..|+.++  .+-+.++++. +|+||
T Consensus         3 PL~girVld~~-~~~agp~~~~~lad~GA~VikvE~p~~~~~~~~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~-aDv~i   80 (359)
T d1x74a1           3 PLSGLRVVELA-GIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSDQGLELALKLIAK-ADVLI   80 (359)
T ss_dssp             TTTTCEEEEEC-CSTHHHHHHHHHHHTTCEEEEEECC-----CCCCGGGCSCEEEECCTTSHHHHHHHHHHHTT-CSEEE
T ss_pred             CCCCCEEEEcC-CchHHHHHHHHHHHhCCEEEEECCCCCCCchhhhhhhCCCeEEEEeCcCHHHHHHHHHHHhh-CCEEE
Confidence            45677777665 45667778888889999999775543211111111235668889999882  2446677787 99999


Q ss_pred             EcCC
Q 022495          141 CATG  144 (296)
Q Consensus       141 ~~ag  144 (296)
                      +|-.
T Consensus        81 ~n~~   84 (359)
T d1x74a1          81 EGYR   84 (359)
T ss_dssp             ECSC
T ss_pred             ecCC
Confidence            9853

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=86.82  E-value=0.15  Score=36.44  Aligned_cols=38  Identities=21%  Similarity=0.177  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL  107 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~  107 (296)
                      |-++| +|.+|+++++.|.+.++.+.+.+|++++.+++.
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~   39 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLA   39 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHH
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchh
Confidence            35676 699999999988654444457899988877654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.59  E-value=0.31  Score=36.11  Aligned_cols=34  Identities=6%  Similarity=0.023  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      .++|+|+|| |..|...|..|.+.|.+|+++.+..
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            478999996 9999999999999999999887654

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.54  E-value=0.47  Score=35.99  Aligned_cols=39  Identities=21%  Similarity=0.216  Sum_probs=31.3

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHH--------------------HCC-CeEEEEEcCcc
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLL--------------------AKG-FAVKAGVRDLD  101 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~--------------------~~g-~~V~~~~r~~~  101 (296)
                      .++.+++|+|+|+ |.++.-+|+.|+                    +.| .+|+++.|...
T Consensus        35 ~~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~   94 (216)
T d1lqta1          35 PDLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP   94 (216)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred             ccccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECCh
Confidence            3567899999996 999999999888                    456 46888888753

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=86.32  E-value=0.32  Score=40.02  Aligned_cols=29  Identities=21%  Similarity=0.266  Sum_probs=26.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVR   98 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r   98 (296)
                      ++|+| +|+-|..+|..|.++|.+|.++-+
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   38 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEM   38 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeC
Confidence            78998 599999999999999999999976

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=86.02  E-value=1.2  Score=35.69  Aligned_cols=73  Identities=11%  Similarity=0.101  Sum_probs=46.4

Q ss_pred             CCCeEE-EEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcc-----cC-CCCCeEEEEcccCCChHHHHHHhc--CC
Q 022495           65 KQKKIF-VAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTL-----SK-DNPSLQIVKADVTEGSAKLSEAIG--DD  135 (296)
Q Consensus        65 ~~~~il-VtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~-~~~~~~~~~~D~~d~~~~~~~~~~--~~  135 (296)
                      ++++|| +..++|.++.+.    +..|++|+.++.+........     .. ...+++++..|+.+   .+.+...  .+
T Consensus       132 ~~~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~---~l~~~~~~~~~  204 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK---FIQREERRGST  204 (309)
T ss_dssp             SCCEEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH---HHHHHHHHTCC
T ss_pred             CCCeEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH---hHHHHhhcCCC
Confidence            467787 566677766654    457899999888875543211     11 23468999999865   2333321  25


Q ss_pred             CCEEEEcCC
Q 022495          136 SEAVVCATG  144 (296)
Q Consensus       136 ~d~vv~~ag  144 (296)
                      .|+||..-.
T Consensus       205 fD~IilDPP  213 (309)
T d2igta1         205 YDIILTDPP  213 (309)
T ss_dssp             BSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999998643

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=86.00  E-value=0.35  Score=38.00  Aligned_cols=37  Identities=22%  Similarity=0.326  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCchHHHHH-----HHHHHHCCCeEEEEEcCcc
Q 022495           65 KQKKIFVAGATGSSGKRI-----VEQLLAKGFAVKAGVRDLD  101 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l-----~~~L~~~g~~V~~~~r~~~  101 (296)
                      .+.+|+|+.|=||+|+..     +..|+++|++|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            477889998899999964     7888899999999999875

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=85.87  E-value=2.1  Score=30.89  Aligned_cols=32  Identities=22%  Similarity=0.287  Sum_probs=27.0

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      ++|.|=| =|-||+.+.+.|.+++.+|+++...
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~   32 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDL   32 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCC
Confidence            4788887 4999999999999999998887643

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=85.79  E-value=0.39  Score=39.21  Aligned_cols=30  Identities=20%  Similarity=0.378  Sum_probs=27.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      ++|+| +|.-|..+|..|.+.|++|.++-+-
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEecC
Confidence            78998 5999999999999999999998653

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=85.79  E-value=0.33  Score=39.11  Aligned_cols=32  Identities=25%  Similarity=0.228  Sum_probs=28.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      =|+|+|| |..|...+.++.++|.+|+++.+.+
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3899985 9999999999999999999998764

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.62  E-value=0.31  Score=36.77  Aligned_cols=71  Identities=11%  Similarity=0.098  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh---cccCCCCCeEEEEcccCCChHHHHHHhc-CCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TLSKDNPSLQIVKADVTEGSAKLSEAIG-DDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~~~d~vv~  141 (296)
                      +.+||=.|++.|.   ++..|.+.|++|++++.++.....   ........+.++.+|..+ ..     +. +..|+|+.
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~-l~-----~~~~~fD~I~~  108 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LS-----FEDKTFDYVIF  108 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CC-----SCTTCEEEEEE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccc-cc-----ccCcCceEEEE
Confidence            4589999876644   556778889999999998764432   111234567888888887 22     21 14899887


Q ss_pred             cCCC
Q 022495          142 ATGF  145 (296)
Q Consensus       142 ~ag~  145 (296)
                      ...+
T Consensus       109 ~~~l  112 (226)
T d1ve3a1         109 IDSI  112 (226)
T ss_dssp             ESCG
T ss_pred             ecch
Confidence            6543

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=85.48  E-value=0.9  Score=33.19  Aligned_cols=70  Identities=16%  Similarity=0.152  Sum_probs=39.2

Q ss_pred             CCCeEEEEcCCchHHHHH-HHHHHHCC--CeEEEE-EcCcchhhhcccCCCCCeEEEEcccCCChHHHHHHhcC-CCCEE
Q 022495           65 KQKKIFVAGATGSSGKRI-VEQLLAKG--FAVKAG-VRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGD-DSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l-~~~L~~~g--~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~v  139 (296)
                      +..+|.|+| .|.+|..+ +..+.+.+  .+|+++ ++++++........  +...+.   .|    ++++++. .+|+|
T Consensus         2 kkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~--~~~~~~---~~----~~ell~~~~id~v   71 (181)
T d1zh8a1           2 RKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV--GNPAVF---DS----YEELLESGLVDAV   71 (181)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH--SSCEEE---SC----HHHHHHSSCCSEE
T ss_pred             CCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccc--ccccee---ee----eecccccccccee
Confidence            345899999 59999864 66666543  466644 66666554432111  111111   23    3344433 48999


Q ss_pred             EEcCC
Q 022495          140 VCATG  144 (296)
Q Consensus       140 v~~ag  144 (296)
                      +-+..
T Consensus        72 ~I~tp   76 (181)
T d1zh8a1          72 DLTLP   76 (181)
T ss_dssp             EECCC
T ss_pred             ecccc
Confidence            87653

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.33  E-value=0.32  Score=37.00  Aligned_cols=33  Identities=24%  Similarity=0.120  Sum_probs=29.1

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCC-------CeEEEEEcCc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKG-------FAVKAGVRDL  100 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g-------~~V~~~~r~~  100 (296)
                      .+|+|+|| |.-|...|.+|+++|       ++|.+..+.+
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            48999995 999999999999988       4799998875

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.29  E-value=0.45  Score=34.62  Aligned_cols=31  Identities=16%  Similarity=0.259  Sum_probs=27.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|| |..|...+..+.+.|.+|.++.+..
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~~   34 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGERF   34 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSST
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEec
Confidence            789996 9999999999999999999988653

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=84.93  E-value=0.32  Score=37.02  Aligned_cols=72  Identities=13%  Similarity=0.124  Sum_probs=46.8

Q ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhh---cc-cCCCCCeEEEEcccCCChHHHHHHhcCCCCEEEE
Q 022495           66 QKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKT---TL-SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVC  141 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv~  141 (296)
                      +++||=.|++.|.   +...|+++|.+|++++.++.-...   .. ....++++++.+|..+ .. +.  -. .+|+|+.
T Consensus        16 ~~rVLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~-l~-~~--~~-~fD~v~~   87 (231)
T d1vl5a_          16 NEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ-MP-FT--DE-RFHIVTC   87 (231)
T ss_dssp             CCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C-CC-SC--TT-CEEEEEE
T ss_pred             cCEEEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccc-cc-cc--cc-ccccccc
Confidence            5799999875543   235677889999999988754321   11 1134689999999987 32 11  12 4899987


Q ss_pred             cCCC
Q 022495          142 ATGF  145 (296)
Q Consensus       142 ~ag~  145 (296)
                      +..+
T Consensus        88 ~~~l   91 (231)
T d1vl5a_          88 RIAA   91 (231)
T ss_dssp             ESCG
T ss_pred             cccc
Confidence            7654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=84.89  E-value=0.24  Score=37.29  Aligned_cols=31  Identities=26%  Similarity=0.442  Sum_probs=25.7

Q ss_pred             CeEEEEcCCchHHH-----HHHHHHHHCCCeEEEEE
Q 022495           67 KKIFVAGATGSSGK-----RIVEQLLAKGFAVKAGV   97 (296)
Q Consensus        67 ~~ilVtGa~G~iG~-----~l~~~L~~~g~~V~~~~   97 (296)
                      |+++|||-+.++|+     .|+..|.++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            68999995559988     56788888999999876

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.43  E-value=1  Score=33.99  Aligned_cols=94  Identities=10%  Similarity=0.087  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCc-hHHHHHHHHHHHCCCeEEEEEcCcchhhhc---c-cCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATG-SSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---L-SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~-~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      .+++||-+|+.. ++...+++ +...+..|++++.+++.....   + .....++.++.+|..+ ..   ..-.. +|+|
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~-~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~-~~---~~~~~-fD~I  148 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSR-VVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY-GV---PEFSP-YDVI  148 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHH-HHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CC---GGGCC-EEEE
T ss_pred             ccceEEEecCccchhHHHHHH-HhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHH-cc---ccccc-hhhh
Confidence            367899877544 44444444 444456899999887644321   1 1133578888888765 11   11233 8999


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                      +.+++...-     .   ..+++..+..  +++|.
T Consensus       149 ~~~~~~~~~-----p---~~l~~~LkpG--G~lv~  173 (213)
T d1dl5a1         149 FVTVGVDEV-----P---ETWFTQLKEG--GRVIV  173 (213)
T ss_dssp             EECSBBSCC-----C---HHHHHHEEEE--EEEEE
T ss_pred             hhhccHHHh-----H---HHHHHhcCCC--cEEEE
Confidence            988764321     1   3455554433  36765

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=84.17  E-value=0.81  Score=36.62  Aligned_cols=105  Identities=20%  Similarity=0.230  Sum_probs=56.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHC----C-------CeEEEEEcCcchhhhcccCCCCCeEEEEcccCCChHHHHHH
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAK----G-------FAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEA  131 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~----g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~  131 (296)
                      ++...+|+|.|| |--|-.+++.|.+.    |       .+++++|+..--..........+..+. -|..+ ..++.++
T Consensus        22 ~l~d~kivi~GA-GaAg~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r~d~~~~k~~~a-~~~~~-~~~l~~~   98 (308)
T d1o0sa1          22 LVSQEKYLFFGA-GAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFA-KDMPE-TTSILEV   98 (308)
T ss_dssp             CGGGCCEEEECC-SHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTC-BSSCC-CCCHHHH
T ss_pred             CHHHcEEEEECc-CHHHHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCCcccCHHHHHHH-Hhccc-CCcHHHH
Confidence            445678999996 88888888777653    3       248888886321110000000011111 13322 2334444


Q ss_pred             hcC-CCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          132 IGD-DSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       132 ~~~-~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      ++. +++++|-+.+......       +.+++.|.+..-+.|||.=|
T Consensus        99 i~~~kptvliG~s~~~g~ft-------~evv~~Ma~~~~~PIIFaLS  138 (308)
T d1o0sa1          99 IRAARPGALIGASTVRGAFN-------EEVIRAMAEINERPIIFALS  138 (308)
T ss_dssp             HHHHCCSEEEECSSCTTCSC-------HHHHHHHHHHCSSCEEEECC
T ss_pred             HhccccccEEecccccCCCC-------HHHHHHHHhhCCCcEEEEcc
Confidence            443 4789997776533221       45777777665567887544

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.02  E-value=0.46  Score=39.49  Aligned_cols=33  Identities=21%  Similarity=0.317  Sum_probs=29.2

Q ss_pred             eEEEEcCCchHHHHHHHHHHH------CCCeEEEEEcCcc
Q 022495           68 KIFVAGATGSSGKRIVEQLLA------KGFAVKAGVRDLD  101 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~------~g~~V~~~~r~~~  101 (296)
                      =|+|+|| |--|+..|..|++      +|.+|.++.|...
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~   72 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH   72 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence            3899997 9999999999997      7999999998764

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.77  E-value=0.85  Score=33.34  Aligned_cols=69  Identities=17%  Similarity=0.230  Sum_probs=41.3

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHC-CCeEEEE-EcCcchhhhcccCC--CCCeEEEEcccCCChHHHHHHhcC-CCCEEEE
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAK-GFAVKAG-VRDLDKAKTTLSKD--NPSLQIVKADVTEGSAKLSEAIGD-DSEAVVC  141 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~-~~d~vv~  141 (296)
                      .+|.|+|. |.+|+..++.|... +.+|+++ ++++++........  .....+    ..|    ++++++. .+|+|+-
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~----~~~ll~~~~iD~v~I   72 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI----HGS----YESLLEDPEIDALYV   72 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESS----HHHHHHCTTCCEEEE
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee----cCc----HHHhhhccccceeee
Confidence            47999995 89999999988875 5677755 66666554332111  112222    123    3344432 4999997


Q ss_pred             cCC
Q 022495          142 ATG  144 (296)
Q Consensus       142 ~ag  144 (296)
                      +..
T Consensus        73 ~tp   75 (184)
T d1ydwa1          73 PLP   75 (184)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            653

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.72  E-value=0.7  Score=34.82  Aligned_cols=31  Identities=16%  Similarity=0.247  Sum_probs=28.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|| |.-|...|..+.+.|.+|.++.+.+
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            799996 9999999999999999999998654

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=83.50  E-value=0.52  Score=37.98  Aligned_cols=31  Identities=23%  Similarity=0.174  Sum_probs=28.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|| |.-|...|.+++++|.+|+++.+.+
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence            899995 9999999999999999999997765

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.33  E-value=0.63  Score=35.06  Aligned_cols=32  Identities=16%  Similarity=0.181  Sum_probs=26.4

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--eEEEEEcC
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGF--AVKAGVRD   99 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~   99 (296)
                      ..++|.|| |++|..+|.+|.++|.  +|+++++.
T Consensus         5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e   38 (213)
T d1m6ia1           5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSED   38 (213)
T ss_dssp             EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence            46889986 9999999999998875  58877764

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=83.32  E-value=0.99  Score=28.99  Aligned_cols=33  Identities=15%  Similarity=0.261  Sum_probs=27.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |||||+| +|+=-.+++..|.+...+|++.--++
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN~   33 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGNA   33 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCCc
Confidence            6899999 58888999999999888888864443

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.08  E-value=0.55  Score=35.34  Aligned_cols=31  Identities=13%  Similarity=0.154  Sum_probs=28.0

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEcC
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVRD   99 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~   99 (296)
                      -++|+|| |..|...|..+.+.|.+|.++.+.
T Consensus         7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            5899995 999999999999999999998765

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.00  E-value=0.78  Score=34.32  Aligned_cols=31  Identities=19%  Similarity=0.176  Sum_probs=27.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      ++|+|| |..|...+..+.+.|.+|.++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            688886 9999999999999999999997653

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.07  E-value=6.8  Score=28.75  Aligned_cols=72  Identities=19%  Similarity=0.182  Sum_probs=47.4

Q ss_pred             ccCCCCeEEEEc-CCchHHHHHHHHHHHCC-CeEEEEEcCcchhhhc---ccCCCCCeEEEEcccCCChHHHHHHhcCCC
Q 022495           62 VSVKQKKIFVAG-ATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAKTT---LSKDNPSLQIVKADVTEGSAKLSEAIGDDS  136 (296)
Q Consensus        62 ~~~~~~~ilVtG-a~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~  136 (296)
                      .+++|++||=.| |+|.+|..    ++.+| .+|++++.++......   .........++.+|+.+ .       .+++
T Consensus        43 ~dl~g~~vLDlg~GtG~l~i~----a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~-~-------~~~f  110 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGVLSYG----ALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-F-------NSRV  110 (201)
T ss_dssp             TSSTTCEEEEETCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-C-------CCCC
T ss_pred             CCCCCCEEEECcCcchHHHHH----HHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhh-h-------CCcC
Confidence            357889998666 45555543    44677 4899999997654421   22234577888888766 2       2249


Q ss_pred             CEEEEcCCC
Q 022495          137 EAVVCATGF  145 (296)
Q Consensus       137 d~vv~~ag~  145 (296)
                      |+||.|..+
T Consensus       111 D~Vi~nPP~  119 (201)
T d1wy7a1         111 DIVIMNPPF  119 (201)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEEcCcc
Confidence            999988754

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.72  E-value=0.97  Score=33.85  Aligned_cols=31  Identities=26%  Similarity=0.268  Sum_probs=26.5

Q ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCeEEEEEc
Q 022495           67 KKIFVAGATGSSGKRIVEQLLAKGFAVKAGVR   98 (296)
Q Consensus        67 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r   98 (296)
                      |||++.| ++..|..+.+.|.+.|++|+++.-
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFT   31 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEc
Confidence            5788887 688999999999999999887653

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.50  E-value=1.4  Score=33.24  Aligned_cols=93  Identities=12%  Similarity=0.161  Sum_probs=56.6

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhh---hcc-cCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAK---TTL-SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      .+.+||.+|+..+--.++...|.  |.+|+.+.++++-..   +.+ ...-.++.++.+|..+ ..   .... +.|.|+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~-g~---~~~~-pfD~Ii  150 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK-GF---PPKA-PYDVII  150 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CC---GGGC-CEEEEE
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECcccc-CC---cccC-cceeEE
Confidence            46789988865444455555565  567999999865322   111 1133789999999876 21   1123 489999


Q ss_pred             EcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEE
Q 022495          141 CATGFQPGWDLFAPWKAINLVEACRKRGVNRFIL  174 (296)
Q Consensus       141 ~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~  174 (296)
                      .+++...-.        ..++++++..|  ++|.
T Consensus       151 v~~a~~~ip--------~~l~~qL~~gG--rLv~  174 (215)
T d1jg1a_         151 VTAGAPKIP--------EPLIEQLKIGG--KLII  174 (215)
T ss_dssp             ECSBBSSCC--------HHHHHTEEEEE--EEEE
T ss_pred             eecccccCC--------HHHHHhcCCCC--EEEE
Confidence            887754211        45666665443  6665

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=81.29  E-value=3.3  Score=34.11  Aligned_cols=80  Identities=8%  Similarity=0.025  Sum_probs=55.2

Q ss_pred             ccCCCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcc--hhh---hcccCCCCCeEEEEcccCCC--hHHHHHHhcC
Q 022495           62 VSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLD--KAK---TTLSKDNPSLQIVKADVTEG--SAKLSEAIGD  134 (296)
Q Consensus        62 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~--~~~---~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~  134 (296)
                      .+|+|-+|+=.+ ...-|-...+.|++.|++|+=+-+...  ...   ..+...+.+-+.+..|+.++  .+.+.++++.
T Consensus         7 gPL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~   85 (402)
T d1xk7a1           7 GPLAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMET   85 (402)
T ss_dssp             STTTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhh
Confidence            467888888776 455688888899999999997765431  111   01111235668899999982  2446677888


Q ss_pred             CCCEEEEcC
Q 022495          135 DSEAVVCAT  143 (296)
Q Consensus       135 ~~d~vv~~a  143 (296)
                       +|+||+|-
T Consensus        86 -aDv~i~n~   93 (402)
T d1xk7a1          86 -TDIFIEAS   93 (402)
T ss_dssp             -CSEEEEEC
T ss_pred             -cCCceeee
Confidence             99999985

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.09  E-value=1  Score=33.58  Aligned_cols=31  Identities=23%  Similarity=0.197  Sum_probs=27.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      ++|+|| |..|...|..+.+.|.+|.++.+..
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            788985 9999999999999999999997754

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.90  E-value=1.7  Score=32.32  Aligned_cols=92  Identities=20%  Similarity=0.271  Sum_probs=57.8

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCC---eEEEEEcCcchhhhcccCCCCCeEEEEcc-c------------------CCCh
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGF---AVKAGVRDLDKAKTTLSKDNPSLQIVKAD-V------------------TEGS  125 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-~------------------~d~~  125 (296)
                      +|.|+|- |+-|..++..|.+.|.   +.++++-+...+...    .....+..++ +                  .+ .
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~----~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~-~   76 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQALKNI----AARTVLQLGPGVTKGLGAGANPEVGRQAALED-R   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSC----SCSEEEECCHHHHTTBCCCSCHHHHHHHHHHT-H
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcC----CccceeccccccccCCCCCCChHHHHHHHHHH-H
Confidence            5788884 9999999999999873   555555554443321    1112221111 1                  12 4


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          126 AKLSEAIGDDSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       126 ~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                      +.+.+.+++ .|.||-+||.-.....   -..--+++.+++.++
T Consensus        77 ~~I~~~l~~-~d~vfi~AGlGGGTGt---gaapviA~~ake~g~  116 (198)
T d1ofua1          77 ERISEVLEG-ADMVFITTGMGGGTGT---GAAPIIAEVAKEMGI  116 (198)
T ss_dssp             HHHHHHHTT-CSEEEEEEETTSSHHH---HHHHHHHHHHHHTTC
T ss_pred             HHHHHHhCC-CCeEEEEecCCCCccc---cHHHHHHHHHHHcCC
Confidence            668888888 9999999997554221   111457888899885

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=80.78  E-value=0.16  Score=39.02  Aligned_cols=40  Identities=18%  Similarity=0.158  Sum_probs=27.3

Q ss_pred             CCeEEEEcCCchHHH-HHHHHHHHC-CCeEEE-EEcCcchhhhc
Q 022495           66 QKKIFVAGATGSSGK-RIVEQLLAK-GFAVKA-GVRDLDKAKTT  106 (296)
Q Consensus        66 ~~~ilVtGa~G~iG~-~l~~~L~~~-g~~V~~-~~r~~~~~~~~  106 (296)
                      .-+|.|+|+ |.+|. +++..+... +.+|++ .+|++++....
T Consensus        33 ~iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~   75 (221)
T d1h6da1          33 RFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIV   75 (221)
T ss_dssp             CEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHH
T ss_pred             CEEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHH
Confidence            348999995 99996 566666554 677774 46777666543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.60  E-value=2.2  Score=31.33  Aligned_cols=71  Identities=14%  Similarity=0.152  Sum_probs=46.3

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhc---c-cCCCCCeEEEEcccCCChHHHHHHhcCCCCEEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTT---L-SKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVV  140 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~-~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vv  140 (296)
                      ...+||=.|++  .|. .+..|+++|++|++++.++......   . ...-.++.+..+|+.+ ..     +.+..|.|+
T Consensus        30 ~~grvLDiGcG--~G~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~-~~-----~~~~fD~I~  100 (198)
T d2i6ga1          30 APGRTLDLGCG--NGR-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNT-LT-----FDGEYDFIL  100 (198)
T ss_dssp             CSCEEEEETCT--TSH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTT-CC-----CCCCEEEEE
T ss_pred             CCCcEEEECCC--CCH-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccc-cc-----ccccccEEE
Confidence            34589999863  555 4567888999999999987654321   1 1122467888888876 22     122389998


Q ss_pred             EcCC
Q 022495          141 CATG  144 (296)
Q Consensus       141 ~~ag  144 (296)
                      .+.-
T Consensus       101 ~~~~  104 (198)
T d2i6ga1         101 STVV  104 (198)
T ss_dssp             EESC
T ss_pred             Eeee
Confidence            6553

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=80.60  E-value=4.4  Score=29.13  Aligned_cols=30  Identities=30%  Similarity=0.332  Sum_probs=25.9

Q ss_pred             eEEEEcCCchHHHHHHHHHHHCCCeEEEEEc
Q 022495           68 KIFVAGATGSSGKRIVEQLLAKGFAVKAGVR   98 (296)
Q Consensus        68 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r   98 (296)
                      ||.|-| =|-||+.+.+.+++++.+|+++..
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd   31 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVND   31 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECC
Confidence            578887 699999999999999988887755

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=80.51  E-value=3.4  Score=33.65  Aligned_cols=104  Identities=12%  Similarity=0.050  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCCCeEEEEEcCcchhhhcccCCCCCeEEEEcc-----cCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKAD-----VTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----~~d~~~~~~~~~~~~~d~v  139 (296)
                      +...|+||.|+...=..+++.|++.|..|++-.=.-..........+..+..+..+     ..| .+.+.+.+..+...+
T Consensus        90 ~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d-~~~l~~~~~~~~~~i  168 (382)
T d1b5pa_          90 TPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPD-PERVRRAITPRTKAL  168 (382)
T ss_dssp             CGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-HHHHHTTCCTTEEEE
T ss_pred             ccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCC-HHHHHHhCCCCCeEE
Confidence            34578888654433345677788888776654322222222221122333334322     124 566666655434455


Q ss_pred             EEcCCCCCCCCCcchhHHHHHHHHHHHcCC
Q 022495          140 VCATGFQPGWDLFAPWKAINLVEACRKRGV  169 (296)
Q Consensus       140 v~~ag~~~~~~~~~~~~~~~~l~~~~~~~~  169 (296)
                      +.|..-.+..........+.+++.|+++++
T Consensus       169 ~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~  198 (382)
T d1b5pa_         169 VVNSPNNPTGAVYPKEVLEALARLAVEHDF  198 (382)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred             EECCCCCCcchhCCHHHHHHHHHHHHHcCe
Confidence            555432233333344455889999988774

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.43  E-value=2.4  Score=33.57  Aligned_cols=104  Identities=13%  Similarity=0.154  Sum_probs=57.9

Q ss_pred             cCCCCeEEEEcCCchHHHHHHHHHHHC----CC-------eEEEEEcCcch---hhhcccCCCCCeEEEEccc-CCChHH
Q 022495           63 SVKQKKIFVAGATGSSGKRIVEQLLAK----GF-------AVKAGVRDLDK---AKTTLSKDNPSLQIVKADV-TEGSAK  127 (296)
Q Consensus        63 ~~~~~~ilVtGa~G~iG~~l~~~L~~~----g~-------~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~-~d~~~~  127 (296)
                      +++..+|+|.|| |--|-.+++.|...    |.       ++++++++.--   ......  ..+..+.+-+- .. ...
T Consensus        22 ~l~d~kiv~~GA-GsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~--~~k~~~a~~~~~~~-~~~   97 (294)
T d1pj3a1          22 PISEHKILFLGA-GEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKID--SYQEPFTHSAPESI-PDT   97 (294)
T ss_dssp             CGGGCCEEEECC-SHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCC--TTTGGGCBCCCSSC-CSS
T ss_pred             CHHHcEEEEECc-cHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccH--HHHHHhhccccccc-hhH
Confidence            345568999986 88888787776543    42       48888886311   111111  11111111111 11 234


Q ss_pred             HHHHhcC-CCCEEEEcCCCCCCCCCcchhHHHHHHHHHHHcCCCEEEEEcc
Q 022495          128 LSEAIGD-DSEAVVCATGFQPGWDLFAPWKAINLVEACRKRGVNRFILISS  177 (296)
Q Consensus       128 ~~~~~~~-~~d~vv~~ag~~~~~~~~~~~~~~~~l~~~~~~~~~~iV~~SS  177 (296)
                      +.++++. ++|++|-+.|...-..       +.+++.|.+..-+.|||.=|
T Consensus        98 L~e~i~~~kptvliG~S~~~g~ft-------~evi~~Ma~~~~~PIIFaLS  141 (294)
T d1pj3a1          98 FEDAVNILKPSTIIGVAGAGRLFT-------PDVIRAMASINERPVIFALS  141 (294)
T ss_dssp             HHHHHHHHCCSEEEECCCSSCCSC-------HHHHHHHHHHCSSCEEEECC
T ss_pred             HHHHHHhcCCceEEEecCCCCcCC-------HHHHHHHHhcCCCcEEEEcc
Confidence            5555542 3899998776432211       46778887776678888655

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.13  E-value=2.6  Score=33.62  Aligned_cols=70  Identities=14%  Similarity=0.103  Sum_probs=44.0

Q ss_pred             CCCeEEEEcCCchHHHHHHHHHHHCC-CeEEEEEcCcchhh--hc--ccCCCCCeEEEEcccCCChHHHHHHhcCCCCEE
Q 022495           65 KQKKIFVAGATGSSGKRIVEQLLAKG-FAVKAGVRDLDKAK--TT--LSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAV  139 (296)
Q Consensus        65 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~v  139 (296)
                      ++++||-.|+..|+   ++..+++.| .+|++++.++.-..  +.  ......++.++.+|+.+ .+.   -.. ++|+|
T Consensus        33 ~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~-~~~---~~~-~~D~i  104 (316)
T d1oria_          33 KDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE-VEL---PVE-KVDII  104 (316)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT-CCC---SSS-CEEEE
T ss_pred             CcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHH-ccc---ccc-eeEEE
Confidence            58899999865433   445566778 46999987753211  11  11234679999999988 321   112 48988


Q ss_pred             EEc
Q 022495          140 VCA  142 (296)
Q Consensus       140 v~~  142 (296)
                      +..
T Consensus       105 vs~  107 (316)
T d1oria_         105 ISE  107 (316)
T ss_dssp             EEC
T ss_pred             eee
Confidence            864

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=80.01  E-value=1.2  Score=33.69  Aligned_cols=31  Identities=23%  Similarity=0.248  Sum_probs=28.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEEcCc
Q 022495           69 IFVAGATGSSGKRIVEQLLAKGFAVKAGVRDL  100 (296)
Q Consensus        69 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~  100 (296)
                      |+|+|| |.-|...+..|.+.|.+|.++.+.+
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            788986 9999999999999999999988754