Citrus Sinensis ID: 022507

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290------
Protein Sequence
MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPKSDVEAYRK
Secondary Structure (PSIPRED)
cEEEEEEHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcHHHHHHHHHHHHHEEccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEEHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
Coil and Loop (DISEMBL)
MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASlkgvnipmyIAIKRLTPLAVLVAGffsgkgkpttQVTLSVLLTATGCVIAALGDfsfdlsgysMALTSVFFQTMYLVLVEKsgaedglsSVEIMFYNSFLSLPFLVFLIIVtgefpgslsllfsksnsFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKkkklpksdveayrk
Flexible Loop (DISEMBL)
MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKyqqkkkklpksdveayrk
Low Complexity Region (SEG)
MAMVFINKAVIMQYAHSMtlltlqqlatalliqaGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGslsllfsksnsfsflvililslvMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAkyqqkkkklpkSDVEAYRK
Disordered region (IsUnstruct)
**MVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKY*****************
Disordered Region (DISOPRED)
MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWY**********************
Disordered Region (DISEMBL)
MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKY*****************
Disordered Region (DISPRO)
MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQK**************
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPKSDVEAYRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	296	2.2.26 [Sep-21-2011]
Q54YK1	382	Putative UDP-sugar transp	yes	no	0.891	0.691	0.366	4e-33
Q5M8T2	416	Solute carrier family 35	yes	no	0.922	0.656	0.284	2e-27
Q8BGF8	422	Solute carrier family 35	yes	no	0.912	0.639	0.280	3e-26
Q95YI5	373	UDP-sugar transporter UST	yes	no	0.969	0.769	0.307	9e-26
Q18779	329	UDP-sugar transporter sqv	yes	no	0.986	0.887	0.297	1e-25
Q15B89	343	UDP-N-acetylglucosamine/U	yes	no	0.939	0.810	0.299	3e-21
Q9NTN3	355	UDP-glucuronic acid/UDP-N	no	no	0.939	0.783	0.299	3e-21
A2VE55	355	UDP-N-acetylglucosamine/U	no	no	0.939	0.783	0.302	4e-21
Q5RDC9	355	UDP-N-acetylglucosamine/U	no	no	0.939	0.783	0.299	7e-21
Q76EJ3	337	UDP-N-acetylglucosamine/U	no	no	0.949	0.833	0.283	4e-18

>sp|Q54YK1|Y8631_DICDI Putative UDP-sugar transporter DDB_G0278631 OS=Dictyostelium discoideum GN=DDB_G0278631 PE=3 SV=2

 Score =  141 bits (356), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 154/273 (56%), Gaps = 9/273 (3%)

Query: 13  QYAHSMTLLTLQQLATALLIQAGRQMGYTK-SKAIDLMTAKKLLPVSLFYNANVAFALAS 71
            ++ S  LL  Q + T +++   +     K +   +  T KKL+P+S  Y  NV   L S
Sbjct: 116 DFSASNFLLFNQMVVTIVILHILKHFNILKINTNFEKETIKKLMPLSFCYIINVLLGLDS 175

Query: 72  LKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLS 131
           LK +NIPMY A+KRL  + +LV  +F  K     ++  SV++   G V+A + D SF+  
Sbjct: 176 LKQLNIPMYSALKRLVAVVILVMEYFILKKVSPPKIIASVVVMVIGAVVAGITDLSFNSL 235

Query: 132 GYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTG--EFPGS 189
           GYS+ L S  FQ  YL+ V+K  +   +S+ ++++YNS LSLP  +FL+IV    E+  +
Sbjct: 236 GYSLVLLSCIFQASYLIYVKKVAS--NMSTYDMLYYNSVLSLPITIFLMIVNQEIEYFQT 293

Query: 190 LSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFV 249
              L+      SF    ILS+ +G  LNF +F CT VNS LTT++ G +K + ST +G +
Sbjct: 294 FEHLYDS----SFQAYFILSIFLGFFLNFCIFFCTSVNSPLTTSVTGQVKNIASTIIGAM 349

Query: 250 VLGGVQVRALNVTGLLINTAGGVWYSYAKYQQK 282
           V   + +  +N+ GL+IN  G +WYS+ K   K
Sbjct: 350 VFNDIIIHPINILGLIINIIGSIWYSFLKLTSK 382

May be nvolved in the import of UDP-sugars.
Dictyostelium discoideum (taxid: 44689)

>sp|Q5M8T2|S35D3_HUMAN Solute carrier family 35 member D3 OS=Homo sapiens GN=SLC35D3 PE=2 SV=1

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 144/292 (49%), Gaps = 19/292 (6%)

Query: 16  HSMTLLTLQQLAT----ALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALAS 71
           +  + LTL Q  T    AL ++  R++G        L  A+    V++      +  L S
Sbjct: 36  YQFSFLTLVQCLTSSTAALSLELLRRLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWS 95

Query: 72  LKGVNIPMYIAIKRLTPLAVLVAGFFSGK-GKPTTQVTLSVLLTATGCVIAALGDFSFDL 130
           L+G+++PMY+  KR  PL  ++ G    K G P+  V  +VL+T  G  +A  GD + D 
Sbjct: 96  LRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDP 155

Query: 131 SGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGE----- 185
            GY   + +V     YLVL++K+ A+     +   +  +  + P LV     + +     
Sbjct: 156 IGYVTGVLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAVSATPLLVICSFASTDSIHAW 215

Query: 186 -FPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGST 244
            FPG            + + I +  +++G  +NFT   CT +NSA+TT+ VGV+K + + 
Sbjct: 216 TFPGW--------KDPAMVCIFVACILIGCAMNFTTLHCTYINSAVTTSFVGVVKSIATI 267

Query: 245 TLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPKSDVEAYRK 296
           T+G V    V+  +L + G+++NT G + Y  AK+ + +K+    D+EA  +
Sbjct: 268 TVGMVAFSDVEPTSLFIAGVVVNTLGSIIYCVAKFMETRKQSNYEDLEAQPR 319

May play a role in hemostasis as a regulator of the biosynthesis of platelet-dense granules.

Homo sapiens (taxid: 9606)

>sp|Q8BGF8|S35D3_MOUSE Solute carrier family 35 member D3 OS=Mus musculus GN=Slc35d3 PE=2 SV=1

 Score =  119 bits (297), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 19/289 (6%)

Query: 16  HSMTLLTLQQLAT----ALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALAS 71
           +  + LTL Q  T    AL ++  R++G        L  A+    V++      +  L S
Sbjct: 36  YQFSFLTLVQCLTSSTAALSLELLRRLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWS 95

Query: 72  LKGVNIPMYIAIKRLTPLAVLVAGFFSGK-GKPTTQVTLSVLLTATGCVIAALGDFSFDL 130
           L+G+++PMY+  KR  PL  ++ G    K G P+  V  +VL+T  G  +A  GD + D 
Sbjct: 96  LRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDP 155

Query: 131 SGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGE----- 185
            GY   + +V     YLVL++K+ A+     +   +  +  + P LV     + +     
Sbjct: 156 IGYVTGVLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAVSATPLLVICSFASTDSIHAW 215

Query: 186 -FPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGST 244
            FPG            + + I +  +++G  +NFT   CT +NSA+TT+ VGV+K + + 
Sbjct: 216 TFPGW--------KDPAMVSIFVACILIGCAMNFTTLHCTYINSAVTTSFVGVVKSIATI 267

Query: 245 TLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPKSDVEA 293
           T+G V    V+  +L + G+++NT G + Y  AK+ + +++    D+E+
Sbjct: 268 TVGMVAFSDVEPTSLFIAGVVVNTLGSIIYCVAKFLETRRQSNYEDLES 316

May play a role in hemostasis as a regulator of the biosynthesis of platelet-dense granules.

Mus musculus (taxid: 10090)

>sp|Q95YI5|US74C_DROME UDP-sugar transporter UST74c OS=Drosophila melanogaster GN=frc PE=1 SV=2

 Score =  117 bits (293), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 149/293 (50%), Gaps = 6/293 (2%)

Query: 6   INKAVIMQYAH-SMTLLTLQQL-ATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNA 63
           +NK V+  Y   S   L+L QL A+ +++  G+++       +   T  K+ P+ L +  
Sbjct: 80  VNKTVLTSYHFPSFLFLSLGQLTASIVVLGMGKRLKLVNFPPLQRNTFAKIFPLPLIFLG 139

Query: 64  NVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAAL 123
           N+ F L   K +++PM+ A++R + L  ++        +P+  V +SV     G ++AA 
Sbjct: 140 NMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLRPSNAVQVSVYAMIGGALLAAS 199

Query: 124 GDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNS-FLSLPFLVFLIIV 182
            D SF++ GY   + +        V V+K      +    +M+YNS F+ LP L  L  V
Sbjct: 200 DDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGLMYYNSLFMFLPALA-LNYV 258

Query: 183 TGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVG 242
           TG    +L+  F + N   F+V  +LS VMG IL+++  LCT  NSALTTTIVG LK + 
Sbjct: 259 TGNLDQALN--FEQWNDSVFVVQFLLSCVMGFILSYSTILCTQFNSALTTTIVGCLKNIC 316

Query: 243 STTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPKSDVEAYR 295
            T LG  + G      LN  G+ I+    + Y+Y  +++K+    +  + + R
Sbjct: 317 VTYLGMFIGGDYVFSWLNCIGINISVLASLLYTYVTFRRKRAPDKQDHLPSTR 369

Involved in the import of UDP-sugars from the cytoplasm into the Golgi lumen.

Drosophila melanogaster (taxid: 7227)

>sp|Q18779|SQV7_CAEEL UDP-sugar transporter sqv-7 OS=Caenorhabditis elegans GN=sqv-7 PE=1 SV=1

 Score =  117 bits (293), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 154/306 (50%), Gaps = 14/306 (4%)

Query: 3   MVFINKAVIMQYAHSMTLLTL--QQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           +VF+NK ++  Y     L     Q +AT L++   +     +  ++D    +K++P+ L 
Sbjct: 26  IVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFPSLDSSIPRKIMPLPLL 85

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           Y  N+   L   + +N+PM+  ++R + L  ++  F+    K +  V +SV L   G  I
Sbjct: 86  YFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEFYILNVKASKAVKISVGLMIGGSFI 145

Query: 121 AALGDFSFDLSGYSMA-LTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNS-FLSLPFLVF 178
           AA+ D SFD  GY+M  + ++    + +   +K  A+D L    +MFYN  F+ LP L  
Sbjct: 146 AAIYDLSFDALGYTMIFINNICTAALGVYTKQKLDAKD-LGKYGLMFYNCLFMLLPALC- 203

Query: 179 LIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVL 238
           ++  TG+   + S + S S + S     +LS + G +LN+++ LCT  NSALTTT VG +
Sbjct: 204 VVQYTGDLDRAYSFMLSDSMTSSVWTCFLLSCICGFVLNYSLVLCTHHNSALTTTCVGPI 263

Query: 239 KGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKK-----KKLPKS---D 290
           K +  T +G    G    +  N TG+ ++  G + Y+Y  ++ K      K LP +   D
Sbjct: 264 KNLFVTYVGMFSSGDYVFQWANFTGINVSVFGSILYTYVTFRSKSTTISYKPLPMTMPID 323

Query: 291 VEAYRK 296
           V   R 
Sbjct: 324 VHKPRN 329

Involved in the import of UDP-glucuronic acid (UDP-GlcA), UDP-N-acetylgalactosamine (UDP-GalNAc) and UDP-galactose (UDP-Gal) from the cytoplasm into the Golgi lumen for the biosynthesis of glycoconjugates that play a pivotal role in development.

Caenorhabditis elegans (taxid: 6239)

>sp|Q15B89|S35D2_PIG UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter (Fragment) OS=Sus scrofa GN=SLC35D2 PE=2 SV=1

 Score =  102 bits (255), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 6/284 (2%)

Query: 3   MVFINKAVIMQYAHSMTLLTL--QQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           +V +NK+V+  Y    +L     Q +AT  ++  G+ +   K    D    +K  P+ L 
Sbjct: 44  IVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDFDRNVPRKTFPLPLL 103

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           Y  N    L S K +N+PM+  ++R + L  + A     K   +  + ++V     G  +
Sbjct: 104 YFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFV 163

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNS-FLSLPFLVFL 179
           AA  D +FDL GY   L +          V++      L    +++YN+ F+ LP L  +
Sbjct: 164 AASSDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLA-I 222

Query: 180 IIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLK 239
             +TG+   ++   F       FL+   LS VMG IL +   LCT  NSALTTTIVG +K
Sbjct: 223 AYITGDAQKAMD--FEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIK 280

Query: 240 GVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKK 283
            +  T +G V  G       N  GL I+ AG + YSY  + +++
Sbjct: 281 NILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFSEEQ 324

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Sus scrofa (taxid: 9823)

>sp|Q9NTN3|S35D1_HUMAN UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter OS=Homo sapiens GN=SLC35D1 PE=1 SV=1

 Score =  102 bits (254), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 6/284 (2%)

Query: 3   MVFINKAVIMQYAHSMTLLTL--QQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           +V +NK+V+  Y    +L     Q +AT  ++  G+ +   K   +D    +K  P+ L 
Sbjct: 56  IVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLL 115

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           Y  N    L S K +N+PM+  ++R + L  + A     K   +  + ++V     G  +
Sbjct: 116 YFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFV 175

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNS-FLSLPFLVFL 179
           AA  D +FDL GY+  L +          V++      L    +++YN+ F+ LP L  +
Sbjct: 176 AASSDLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLA-I 234

Query: 180 IIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLK 239
              TG+   ++   F       FL+   LS VMG IL +   LCT  NSALTTTIVG +K
Sbjct: 235 AYFTGDAQKAVE--FEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIK 292

Query: 240 GVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKK 283
            +  T +G V  G       N  GL I+ AG + YSY  + +++
Sbjct: 293 NILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQ 336

Transports both UDP-glucuronic acid (UDP-GlcA) and UDP-N-acetylgalactosamine (UDP-GalNAc) from the cytoplasm to into the endoplasmic reticulum lumen. May participate in glucuronidation and/or chondroitin sulfate biosynthesis.

Homo sapiens (taxid: 9606)

>sp|A2VE55|S35D2_BOVIN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Bos taurus GN=SLC35D2 PE=2 SV=1

 Score =  102 bits (254), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 133/284 (46%), Gaps = 6/284 (2%)

Query: 3   MVFINKAVIMQYAHSMTLLTL--QQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           +V +NK+V+  Y    +L     Q +AT  ++  G+ +   K    D    +K  P+ L 
Sbjct: 56  IVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDFDRNVPRKTFPLPLL 115

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           Y  N    L S K +N+PM+  ++R + L  + A     K   +  + ++V     G  +
Sbjct: 116 YFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFV 175

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNS-FLSLPFLVFL 179
           AA  D +FDL GY   L +          V++      L    +++YN+ F+ LP L  +
Sbjct: 176 AASSDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLA-I 234

Query: 180 IIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLK 239
              TG+   +L   F       FL+   LS VMG IL +   LCT  NSALTTTIVG +K
Sbjct: 235 AYFTGDAQKALD--FEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIK 292

Query: 240 GVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKK 283
            +  T +G V  G       N  GL I+ AG + YSY  + +++
Sbjct: 293 NILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFSEEQ 336

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-GlcNAc, the donor substrate, and thus be involved in growth factor signaling.

Bos taurus (taxid: 9913)

>sp|Q5RDC9|S35D2_PONAB UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Pongo abelii GN=SLC35D2 PE=2 SV=1

 Score =  101 bits (251), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 6/284 (2%)

Query: 3   MVFINKAVIMQYAHSMTLLTL--QQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           +V +NK+V+  Y    +L     Q +AT  ++  G+ +   K   +D    +K  P+ L 
Sbjct: 56  IVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLL 115

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           Y  N    L S K +N+PM+  ++R + L  + A     K   +  + ++V     G  +
Sbjct: 116 YFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFV 175

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNS-FLSLPFLVFL 179
           AA  D +FDL GY   L +          V++      L    +++YN+ F+ LP L  +
Sbjct: 176 AASSDLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLA-I 234

Query: 180 IIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLK 239
              TG+   ++   F       FL+   LS VMG IL +   LCT  NSALTTTIVG +K
Sbjct: 235 AYFTGDAQKAVE--FEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIK 292

Query: 240 GVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKK 283
            +  T +G V  G       N  GL I+ AG + YSY  + +++
Sbjct: 293 NILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQ 336

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Pongo abelii (taxid: 9601)

>sp|Q76EJ3|S35D2_HUMAN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Homo sapiens GN=SLC35D2 PE=1 SV=1

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 8/289 (2%)

Query: 3   MVFINKAVIMQYA-HSMTLLTLQQLA-TALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           +V +NKA++  Y   S   L + Q+A T +++   +          D     KL P+ L 
Sbjct: 41  IVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLL 100

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLT-PLAVLVAGFFSGKGKPTTQVTLSVLLTATGCV 119
           Y  N    L+S   +++PM+  +++ T PL +L+     GK + +  + LSV     G  
Sbjct: 101 YVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGK-QYSLNIILSVFAIILGAF 159

Query: 120 IAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNS-FLSLPFLVF 178
           IAA  D +F+L GY     +  F     V  ++      L    ++FYN+ F+ +P L+ 
Sbjct: 160 IAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLI- 218

Query: 179 LIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVL 238
           + + TG+   +    F++  +  F++  +LS  +G +L ++  LC+  NSALTT +VG +
Sbjct: 219 ISVSTGDLQQATE--FNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAI 276

Query: 239 KGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLP 287
           K V    +G ++ G      LN  GL I  AGG+ YS+     + K  P
Sbjct: 277 KNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQLKPKP 325

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
255548622	323	UDP-sugar transporter, putative [Ricinus	1.0	0.916	0.875	1e-144
224089485	298	predicted protein [Populus trichocarpa]	1.0	0.993	0.842	1e-142
224142063	296	predicted protein [Populus trichocarpa]	0.993	0.993	0.854	1e-141
357466545	324	UDP-sugar transporter sqv-7 [Medicago tr	1.0	0.913	0.848	1e-140
297798816	323	hypothetical protein ARALYDRAFT_491578 [	1.0	0.916	0.845	1e-139
18417838	323	UDP-N-acetylglucosamine (UAA) transporte	1.0	0.916	0.835	1e-138
359806755	323	uncharacterized protein LOC100777622 [Gl	1.0	0.916	0.832	1e-136
3281867	296	putative protein [Arabidopsis thaliana]	0.993	0.993	0.834	1e-136
225464329	324	PREDICTED: putative UDP-sugar transporte	1.0	0.913	0.838	1e-131
449442004	317	PREDICTED: putative UDP-sugar transporte	0.972	0.908	0.847	1e-130

>gi|255548622|ref|XP_002515367.1| UDP-sugar transporter, putative [Ricinus communis] gi|223545311|gb|EEF46816.1| UDP-sugar transporter, putative [Ricinus communis]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/298 (87%), Positives = 278/298 (93%), Gaps = 2/298 (0%)

Query: 1   MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           MAMVFINKA++MQY+HSMTLLTLQQLATALLI  GRQMGYTK+K +D+ TAK LLPVSLF
Sbjct: 26  MAMVFINKAILMQYSHSMTLLTLQQLATALLIHFGRQMGYTKAKGVDMQTAKSLLPVSLF 85

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG FSGKGKPTTQVTLSVLLTA G +I
Sbjct: 86  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGCFSGKGKPTTQVTLSVLLTAAGVLI 145

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLI 180
           AALGDFSFDL GYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFL FLI
Sbjct: 146 AALGDFSFDLIGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLAFLI 205

Query: 181 IVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG 240
           I TGEFP SLSLLF+KS+S SFLVILILSLVMGI+LN+TMFLCTIVNSALTTTIVGVLKG
Sbjct: 206 ISTGEFPNSLSLLFAKSSSLSFLVILILSLVMGIVLNYTMFLCTIVNSALTTTIVGVLKG 265

Query: 241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK--SDVEAYRK 296
           VGSTTLGFV+LGGVQV  LNVTGL+INT GGVWYSYAKYQQKK K PK  +D+EA+R+
Sbjct: 266 VGSTTLGFVLLGGVQVHGLNVTGLVINTFGGVWYSYAKYQQKKNKPPKVMTDIEAHRR 323

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089485|ref|XP_002308729.1| predicted protein [Populus trichocarpa] gi|222854705|gb|EEE92252.1| predicted protein [Populus trichocarpa]

 Score =  508 bits (1309), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/298 (84%), Positives = 276/298 (92%), Gaps = 2/298 (0%)

Query: 1   MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           MAMVFINKA++MQY HSMTLLTLQQLATALLI  GR+ GYT+++ +D+ TAK+LLPVSLF
Sbjct: 1   MAMVFINKAILMQYGHSMTLLTLQQLATALLIHFGRRTGYTRARGVDMQTAKRLLPVSLF 60

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           YNANVAFALASL+GVNIPMYIAIKRLTPLAVL+AG FSGKGKPTTQVTLSVLL A G +I
Sbjct: 61  YNANVAFALASLRGVNIPMYIAIKRLTPLAVLIAGIFSGKGKPTTQVTLSVLLIAAGVII 120

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLI 180
           AALGDFSFDL GY MALTSVFFQTMYLVLVE+SGAEDGLSSVEIMFYNSFLSLPFL+FLI
Sbjct: 121 AALGDFSFDLWGYGMALTSVFFQTMYLVLVERSGAEDGLSSVEIMFYNSFLSLPFLIFLI 180

Query: 181 IVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG 240
           I+TGEFP SL+LLF+KSNS SFLVIL++SL+MGI+LNFTMFLCTIVNSALTTTIVGVLKG
Sbjct: 181 IITGEFPNSLALLFAKSNSLSFLVILVISLIMGIVLNFTMFLCTIVNSALTTTIVGVLKG 240

Query: 241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK--SDVEAYRK 296
           VGSTTLGFV+LGGV+V ALNVTGL+INTAGG+WYSYAKYQQK  K PK  SDVEA  K
Sbjct: 241 VGSTTLGFVLLGGVEVHALNVTGLVINTAGGLWYSYAKYQQKTSKPPKRISDVEARSK 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142063|ref|XP_002324378.1| predicted protein [Populus trichocarpa] gi|222865812|gb|EEF02943.1| predicted protein [Populus trichocarpa]

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/296 (85%), Positives = 273/296 (92%), Gaps = 2/296 (0%)

Query: 3   MVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYN 62
           MVFINKA++MQY HSMTLLTLQQLATALLI  GRQMGYT+S+ +D+ TAKKLLPVSLFYN
Sbjct: 1   MVFINKAILMQYGHSMTLLTLQQLATALLIHFGRQMGYTRSRGVDMQTAKKLLPVSLFYN 60

Query: 63  ANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAA 122
           ANVAFALASLKGVNIPMYIAIKRLTPLAVL+AGF SGKGKPTTQVTLSVLL A G +IAA
Sbjct: 61  ANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGFSSGKGKPTTQVTLSVLLIAAGVIIAA 120

Query: 123 LGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIV 182
           LGDFSFDL GY MALTSVFFQTMYLVLVE+SGAEDGLSS+EIMFYNSFLSLPFL+FLII 
Sbjct: 121 LGDFSFDLWGYGMALTSVFFQTMYLVLVERSGAEDGLSSIEIMFYNSFLSLPFLIFLIIA 180

Query: 183 TGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVG 242
           TGEFP SL+LLF+KSNS SFLVIL++SLVMGI+LNFTMFLCTIVNSALTTTIVGVLKGVG
Sbjct: 181 TGEFPYSLALLFAKSNSLSFLVILVISLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVG 240

Query: 243 STTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK--SDVEAYRK 296
           STTLGFVVLGGV+V ALNVTGL+INT GGVWYSYAKYQQK  K P+  SDVE + K
Sbjct: 241 STTLGFVVLGGVEVHALNVTGLVINTTGGVWYSYAKYQQKMSKPPRQVSDVEVHHK 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466545|ref|XP_003603557.1| UDP-sugar transporter sqv-7 [Medicago truncatula] gi|355492605|gb|AES73808.1| UDP-sugar transporter sqv-7 [Medicago truncatula] gi|388500346|gb|AFK38239.1| unknown [Medicago truncatula]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 253/298 (84%), Positives = 273/298 (91%), Gaps = 2/298 (0%)

Query: 1   MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           MAMVFINKAV+MQYAHSMTLLTLQQL T LLI  GR+MGYT+++ +DL TAK+LLPVS F
Sbjct: 27  MAMVFINKAVLMQYAHSMTLLTLQQLVTTLLIHFGRKMGYTRARGVDLATAKQLLPVSFF 86

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           YNANVAFALASLKGVNIPMYIAIKRLTPLAVL+AG F GKG+PTTQVTLSV+LTA G +I
Sbjct: 87  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGCFMGKGRPTTQVTLSVILTAAGVLI 146

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLI 180
           AALGDFSFDL GYSMA  SVFFQTMYLVLVEKSGAE+GLSSVEIMFYNSFLSLPFL+FLI
Sbjct: 147 AALGDFSFDLFGYSMAFISVFFQTMYLVLVEKSGAENGLSSVEIMFYNSFLSLPFLMFLI 206

Query: 181 IVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG 240
           I TGEFP SLS+LF+KS SFSFLVILILSLVMGI+LNFTMFLCTIVNSALTTTIVGVLKG
Sbjct: 207 IATGEFPYSLSVLFAKSYSFSFLVILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKG 266

Query: 241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK--SDVEAYRK 296
           VGSTT GF +LGGVQV ALNVTGL+INTAGGVWYSYAKYQQKK K  K  +DVEA+RK
Sbjct: 267 VGSTTFGFFLLGGVQVHALNVTGLVINTAGGVWYSYAKYQQKKSKTVKVVTDVEAHRK 324

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798816|ref|XP_002867292.1| hypothetical protein ARALYDRAFT_491578 [Arabidopsis lyrata subsp. lyrata] gi|297313128|gb|EFH43551.1| hypothetical protein ARALYDRAFT_491578 [Arabidopsis lyrata subsp. lyrata]

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/298 (84%), Positives = 273/298 (91%), Gaps = 2/298 (0%)

Query: 1   MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           MAMVFINKAVIMQY HSMTLLTLQQLAT+LLI  GR+MGYT++K IDL TAKKLLPVS+F
Sbjct: 26  MAMVFINKAVIMQYPHSMTLLTLQQLATSLLIHFGRRMGYTRAKGIDLATAKKLLPVSIF 85

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           YNANVAFALASLKGVNIPMYIAIKRLTPLAVL+AG   GKGKPTTQV LSVLLTA GCVI
Sbjct: 86  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGVLFGKGKPTTQVALSVLLTAAGCVI 145

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLI 180
           AALGDFSFDL GY +ALTSVFFQTMYLVLVEKSGAEDGLSS+EIMFYNSFLSLPFL FLI
Sbjct: 146 AALGDFSFDLFGYGLALTSVFFQTMYLVLVEKSGAEDGLSSIEIMFYNSFLSLPFLSFLI 205

Query: 181 IVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG 240
           IVTGEFP SLSLL +K +   FLVIL+LSLVMGI+LNFTMFLCTIVNSALTTTIVGVLKG
Sbjct: 206 IVTGEFPNSLSLLLAKCSYLPFLVILVLSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKG 265

Query: 241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK--SDVEAYRK 296
           VGSTTLGFV+LGGV+V ALNV+GL++NTAGGVWYSYAKY+QKK K  K  SD+EA++K
Sbjct: 266 VGSTTLGFVLLGGVEVHALNVSGLVVNTAGGVWYSYAKYRQKKAKPAKLMSDLEAHKK 323

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18417838|ref|NP_567879.1| UDP-N-acetylglucosamine (UAA) transporter family protein [Arabidopsis thaliana] gi|14596061|gb|AAK68758.1| putative protein [Arabidopsis thaliana] gi|17978697|gb|AAL47342.1| putative protein [Arabidopsis thaliana] gi|332660534|gb|AEE85934.1| UDP-N-acetylglucosamine (UAA) transporter family protein [Arabidopsis thaliana]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/298 (83%), Positives = 272/298 (91%), Gaps = 2/298 (0%)

Query: 1   MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           MAMVFINKAVIMQY HSMT+LTLQQLAT+LLI  GR+MGYT++K ID+ TAKKLLPVS+F
Sbjct: 26  MAMVFINKAVIMQYPHSMTVLTLQQLATSLLIHFGRRMGYTRAKGIDMATAKKLLPVSIF 85

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           YNANVAFALASLKGVNIPMYIAIKRLTPLAVL++G   GKGKPTTQV LSVLLTA GCVI
Sbjct: 86  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLISGVLFGKGKPTTQVALSVLLTAAGCVI 145

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLI 180
           AALGDFSFDL GY +ALTSVFFQTMYLVLVEKSGAEDGLSS+EIMFYNSFLSLPFL  LI
Sbjct: 146 AALGDFSFDLFGYGLALTSVFFQTMYLVLVEKSGAEDGLSSIEIMFYNSFLSLPFLSILI 205

Query: 181 IVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG 240
           IVTGEFP SLSLL +K +   FLVILILSLVMGI+LNFTMFLCTIVNSALTTTIVGVLKG
Sbjct: 206 IVTGEFPNSLSLLLAKCSYLPFLVILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKG 265

Query: 241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK--SDVEAYRK 296
           VGSTTLGFV+LGGV+V ALNV+GL++NTAGGVWYSYAKY+QKK K  K  SD+EA++K
Sbjct: 266 VGSTTLGFVLLGGVEVHALNVSGLVVNTAGGVWYSYAKYRQKKAKPAKLMSDLEAHKK 323

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806755|ref|NP_001241044.1| uncharacterized protein LOC100777622 [Glycine max] gi|255638711|gb|ACU19660.1| unknown [Glycine max]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/298 (83%), Positives = 270/298 (90%), Gaps = 2/298 (0%)

Query: 1   MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           MAMVFINKAV+MQYA+SMTLLTLQQL T LLI  GR+ GYTK++ +D+ TAK+LLP+S+F
Sbjct: 26  MAMVFINKAVLMQYAYSMTLLTLQQLVTTLLIHFGRKTGYTKARELDMTTAKRLLPLSIF 85

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG FSGKGKPTTQV LSV+LTA G +I
Sbjct: 86  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGCFSGKGKPTTQVALSVILTAAGVLI 145

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLI 180
           AALGDFSFDL GYSMA  SVFFQTMYLVLVEKSGAEDGLSS+EIMFYNSFLSLPFL+FLI
Sbjct: 146 AALGDFSFDLFGYSMAFVSVFFQTMYLVLVEKSGAEDGLSSLEIMFYNSFLSLPFLMFLI 205

Query: 181 IVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG 240
           + TGEFP SLS+LF+KS SFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG
Sbjct: 206 VATGEFPNSLSVLFAKSYSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG 265

Query: 241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK--SDVEAYRK 296
           V STT GF +LGGVQV ALNV+GL+INTAGGVWYSYAKY Q+K K  K   DVEA+RK
Sbjct: 266 VVSTTFGFFLLGGVQVHALNVSGLVINTAGGVWYSYAKYHQRKSKAVKLVPDVEAHRK 323

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3281867|emb|CAA19763.1| putative protein [Arabidopsis thaliana] gi|7270063|emb|CAB79878.1| putative protein [Arabidopsis thaliana]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/296 (83%), Positives = 270/296 (91%), Gaps = 2/296 (0%)

Query: 3   MVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYN 62
           MVFINKAVIMQY HSMT+LTLQQLAT+LLI  GR+MGYT++K ID+ TAKKLLPVS+FYN
Sbjct: 1   MVFINKAVIMQYPHSMTVLTLQQLATSLLIHFGRRMGYTRAKGIDMATAKKLLPVSIFYN 60

Query: 63  ANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAA 122
           ANVAFALASLKGVNIPMYIAIKRLTPLAVL++G   GKGKPTTQV LSVLLTA GCVIAA
Sbjct: 61  ANVAFALASLKGVNIPMYIAIKRLTPLAVLISGVLFGKGKPTTQVALSVLLTAAGCVIAA 120

Query: 123 LGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIV 182
           LGDFSFDL GY +ALTSVFFQTMYLVLVEKSGAEDGLSS+EIMFYNSFLSLPFL  LIIV
Sbjct: 121 LGDFSFDLFGYGLALTSVFFQTMYLVLVEKSGAEDGLSSIEIMFYNSFLSLPFLSILIIV 180

Query: 183 TGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVG 242
           TGEFP SLSLL +K +   FLVILILSLVMGI+LNFTMFLCTIVNSALTTTIVGVLKGVG
Sbjct: 181 TGEFPNSLSLLLAKCSYLPFLVILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVG 240

Query: 243 STTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK--SDVEAYRK 296
           STTLGFV+LGGV+V ALNV+GL++NTAGGVWYSYAKY+QKK K  K  SD+EA++K
Sbjct: 241 STTLGFVLLGGVEVHALNVSGLVVNTAGGVWYSYAKYRQKKAKPAKLMSDLEAHKK 296

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464329|ref|XP_002271869.1| PREDICTED: putative UDP-sugar transporter DDB_G0278631 [Vitis vinifera] gi|296083783|emb|CBI24000.3| unnamed protein product [Vitis vinifera]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/298 (83%), Positives = 274/298 (91%), Gaps = 2/298 (0%)

Query: 1   MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           MAMVFINKAV+MQY+ SMTLLT+QQLATALLI  GR MGYT+++ I++ +AK+L  VSLF
Sbjct: 27  MAMVFINKAVLMQYSSSMTLLTVQQLATALLIHFGRVMGYTRARGINMASAKRLFLVSLF 86

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           YNANVAFALASLKGVNIPMYIAIKRLTPLAVL+ GFFSGKG+P+TQV+LSV+LTA G +I
Sbjct: 87  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLITGFFSGKGRPSTQVSLSVILTAAGVII 146

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLI 180
           AALGDFSFDL GYSMALTSV FQTMYLVLVEKSGAEDG SSVEIMFYNSFLSLPFL+FLI
Sbjct: 147 AALGDFSFDLFGYSMALTSVLFQTMYLVLVEKSGAEDGHSSVEIMFYNSFLSLPFLLFLI 206

Query: 181 IVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG 240
           I TGEFP SLSLL +KSNS SFLVILILSLVMGI LN+TMFLCTIVNSALTTTIVGVLKG
Sbjct: 207 IATGEFPNSLSLLVAKSNSLSFLVILILSLVMGIALNYTMFLCTIVNSALTTTIVGVLKG 266

Query: 241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK--SDVEAYRK 296
           VGSTTLGFV+LGGV+V ALNVTGL+INTAGGVWYSYAKYQQKK K PK  SD+EA+RK
Sbjct: 267 VGSTTLGFVLLGGVKVHALNVTGLVINTAGGVWYSYAKYQQKKSKPPKLMSDLEAHRK 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442004|ref|XP_004138772.1| PREDICTED: putative UDP-sugar transporter DDB_G0278631-like [Cucumis sativus] gi|449530474|ref|XP_004172220.1| PREDICTED: putative UDP-sugar transporter DDB_G0278631-like [Cucumis sativus]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/288 (84%), Positives = 265/288 (92%)

Query: 1   MAMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           MAMVF+NKAV+MQY+HSMTLLTLQQLAT LLI  GR+MGYTK+K +D+ TAKK+ PVSLF
Sbjct: 26  MAMVFLNKAVLMQYSHSMTLLTLQQLATTLLIHFGRKMGYTKAKGLDMQTAKKIFPVSLF 85

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
           YNANVAFALASLKGVNIPMYIAIKRLTPLAVL+AGFFSGKG+PT QV  SVLLTA G ++
Sbjct: 86  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGFFSGKGRPTAQVICSVLLTAAGVLV 145

Query: 121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLI 180
           AALGDFSFDL GYSMA TSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFL FLI
Sbjct: 146 AALGDFSFDLVGYSMAFTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLSFLI 205

Query: 181 IVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKG 240
           + TGEFP SLSLL +KSNSFSFLV+ +LSLVMGI+LNFTMFLCTIVNSALTTTIVGVLKG
Sbjct: 206 LSTGEFPNSLSLLIAKSNSFSFLVLFLLSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKG 265

Query: 241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPK 288
           VGSTTLGFV+LGGV+V ALNVTGL+INTAGGVWYSYAKY QKK +  K
Sbjct: 266 VGSTTLGFVILGGVEVHALNVTGLVINTAGGVWYSYAKYHQKKNRPSK 313

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
TAIR|locus:2124819	323	UTr7 "UDP-galactose transporte	1.0	0.916	0.718	2.2e-105
DICTYBASE|DDB_G0278631	382	DDB_G0278631 "DUF250 family pr	0.753	0.583	0.378	1.6e-38
DICTYBASE|DDB_G0276625	314	DDB_G0276625 "TPT transporter	0.918	0.866	0.311	1.1e-30
UNIPROTKB|E1BNY6	423	SLC35D3 "Uncharacterized prote	0.861	0.602	0.271	1.4e-25
UNIPROTKB|Q5M8T2	416	SLC35D3 "Solute carrier family	0.864	0.615	0.270	2.9e-25
RGD|1309428	420	Slc35d3 "solute carrier family	0.864	0.609	0.266	3.6e-25
MGI|MGI:1923407	422	Slc35d3 "solute carrier family	0.864	0.606	0.266	3.7e-25
UNIPROTKB|E2QYX5	423	SLC35D3 "Uncharacterized prote	0.861	0.602	0.267	8.9e-25
UNIPROTKB|F1NYU9	414	SLC35D3 "Uncharacterized prote	0.861	0.615	0.267	2.1e-24
UNIPROTKB|F1S688	384	SLC35D3 "Uncharacterized prote	0.858	0.661	0.263	4.2e-24

TAIR|locus:2124819 UTr7 "UDP-galactose transporter 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
 Identities = 214/298 (71%), Positives = 232/298 (77%)

Query:     1 MAMVFINKAVIMQYAHSMXXXXXXXXXXXXXXXXGRQMGYTKSKAIDLMTAKKLLPVSLF 60
             MAMVFINKAVIMQY HSM                GR+MGYT++K ID+ TAKKLLPVS+F
Sbjct:    26 MAMVFINKAVIMQYPHSMTVLTLQQLATSLLIHFGRRMGYTRAKGIDMATAKKLLPVSIF 85

Query:    61 YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
             YNANVAFALASLKGVNIPMYIAIKRLTPLAVL++G   GKGKPTTQV LSVLLTA GCVI
Sbjct:    86 YNANVAFALASLKGVNIPMYIAIKRLTPLAVLISGVLFGKGKPTTQVALSVLLTAAGCVI 145

Query:   121 AALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLI 180
             AALGDFSFDL GY +ALTSVFFQTMYLVLVEKSGAEDGLSS+EIMFYNSFLSLPFL  LI
Sbjct:   146 AALGDFSFDLFGYGLALTSVFFQTMYLVLVEKSGAEDGLSSIEIMFYNSFLSLPFLSILI 205

Query:   181 IVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGIILNFTMFLCTIVNSALTTTIVGVLKG 240
             IVTGEFP                        MGI+LNFTMFLCTIVNSALTTTIVGVLKG
Sbjct:   206 IVTGEFPNSLSLLLAKCSYLPFLVILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKG 265

Query:   241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAXXXXXXX--XXXXSDVEAYRK 296
             VGSTTLGFV+LGGV+V ALNV+GL++NTAGGVWYSYA             SD+EA++K
Sbjct:   266 VGSTTLGFVLLGGVEVHALNVSGLVVNTAGGVWYSYAKYRQKKAKPAKLMSDLEAHKK 323

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015785 "UDP-galactose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0048527 "lateral root development" evidence=IMP

GO:0080147 "root hair cell development" evidence=IMP

DICTYBASE|DDB_G0278631 DDB_G0278631 "DUF250 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 86/227 (37%), Positives = 127/227 (55%)

Query:    50 TAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTL 109
             T KKL+P+S  Y  NV   L SLK +NIPMY A+KRL  + +LV  +F  K     ++  
Sbjct:   154 TIKKLMPLSFCYIINVLLGLDSLKQLNIPMYSALKRLVAVVILVMEYFILKKVSPPKIIA 213

Query:   110 SVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNS 169
             SV++   G V+A + D SF+  GYS+ L S  FQ  YL+ V+K  +   +S+ ++++YNS
Sbjct:   214 SVVVMVIGAVVAGITDLSFNSLGYSLVLLSCIFQASYLIYVKKVASN--MSTYDMLYYNS 271

Query:   170 FLSLPFLVFLIIVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGIILNFTMFLCTIVNSA 229
              LSLP  +FL+IV  E                          +G  LNF +F CT VNS 
Sbjct:   272 VLSLPITIFLMIVNQEIE--YFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVNSP 329

Query:   230 LTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY 276
             LTT++ G +K + ST +G +V   + +  +N+ GL+IN  G +WYS+
Sbjct:   330 LTTSVTGQVKNIASTIIGAMVFNDIIIHPINILGLIINIIGSIWYSF 376

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

DICTYBASE|DDB_G0276625 DDB_G0276625 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 87/279 (31%), Positives = 132/279 (47%)

Query:     1 MAMVFINKAVIMQYAHSMXXXXXXXXXXXXXXX--XGRQMGYTKSKAIDLMTAKKLLPVS 58
             +++ F NKAV+  Y  +                    +  GY      +L   KKL  +S
Sbjct:    25 VSITFFNKAVLNYYGFNFSNSLTLGQMIFSLFFLVTMKTFGYISYPDFNLDLCKKLASLS 84

Query:    59 LFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVA-GFFSGKGKPTTQVTLSVLLTATG 117
             L +   V   LA+L   N+P++ A++RL+ L V+V  GF  GK  PT +V  SV++   G
Sbjct:    85 LLFILMVISGLAALAKTNVPLFSALRRLSTLIVIVGEGFLLGKVTPTDEVQ-SVVVMVLG 143

Query:   118 CVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLV 177
              +IA LGD +FD  G    L + F    YL+ + K   E  L++  +MFY + LSLP  +
Sbjct:   144 ALIAGLGDATFDFVGSIYILFNCFVTAGYLIYIAKKTKETQLNTFGLMFYCNILSLPATI 203

Query:   178 FLIIVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGIILNFTMFLCTIVNSALTTTIVGV 237
              L  +T E+ G                          +LN+ +FLC+ +NS LTT+I G 
Sbjct:   204 ILTFIT-EWEGISTFEGYGNIGFQFCFFMSSI--QAFLLNYFIFLCSTMNSPLTTSITGQ 260

Query:   238 LKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY 276
             +K +  T +G  + G V +  L   GL+ +T    WYSY
Sbjct:   261 IKSILQTIIGLFMFGDVIITPLLSFGLIFSTLASFWYSY 299

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E1BNY6 SLC35D3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 70/258 (27%), Positives = 118/258 (45%)

Query:    36 RQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG 95
             R++G+       L  A+    V++      +  L SL+G+++PMY+  KR  PL  ++ G
Sbjct:    61 RRLGFIAVPPFGLNLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIG 120

Query:    96 FFSGK-GKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSG 154
                 K G P+  V  +VL+T  G  +A  GD + D  GY   + +V     YLVL++K+ 
Sbjct:   121 VLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKAS 180

Query:   155 AEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGI 214
             A+     +   +  +  + P LV L   + +                          +G 
Sbjct:   181 ADTEHGPLTAQYVIAVSATPLLVVLSFASTD--SIHAWTFPGWKDPAMVTIFVACILIGC 238

Query:   215 ILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWY 274
              +NFT   CT +NSA+TT+ VGV+K + + T+G V    V+  +L + G+++NT G + Y
Sbjct:   239 AMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIY 298

Query:   275 SYAXXXXXXXXXXXSDVE 292
               A            D+E
Sbjct:   299 CAAKFLETRKQINYEDLE 316

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5M8T2 SLC35D3 "Solute carrier family 35 member D3" [Homo sapiens (taxid:9606)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 70/259 (27%), Positives = 117/259 (45%)

Query:    36 RQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG 95
             R++G        L  A+    V++      +  L SL+G+++PMY+  KR  PL  ++ G
Sbjct:    60 RRLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIG 119

Query:    96 FFSGK-GKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSG 154
                 K G P+  V  +VL+T  G  +A  GD + D  GY   + +V     YLVL++K+ 
Sbjct:   120 VLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKAS 179

Query:   155 AEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGI 214
             A+     +   +  +  + P LV     + +                          +G 
Sbjct:   180 ADTEHGPLTAQYVIAVSATPLLVICSFASTD--SIHAWTFPGWKDPAMVCIFVACILIGC 237

Query:   215 ILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWY 274
              +NFT   CT +NSA+TT+ VGV+K + + T+G V    V+  +L + G+++NT G + Y
Sbjct:   238 AMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIY 297

Query:   275 SYAXXXXXXXXXXXSDVEA 293
               A            D+EA
Sbjct:   298 CVAKFMETRKQSNYEDLEA 316

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1309428 Slc35d3 "solute carrier family 35, member D3" [Rattus norvegicus (taxid:10116)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 69/259 (26%), Positives = 117/259 (45%)

Query:    36 RQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG 95
             R++G        L  A+    V++      +  L SL+G+++PMY+  KR  PL  ++ G
Sbjct:    60 RRLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIG 119

Query:    96 FFSGK-GKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSG 154
                 K G P+  V  +VL+T  G  +A  GD + D  GY   + +V     YLVL++K+ 
Sbjct:   120 VLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKAS 179

Query:   155 AEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGI 214
             A+     +   +  +  + P LV     + +                          +G 
Sbjct:   180 ADTEHGPLTAQYVIAVSATPLLVICSFASTD--SIHAWTFPGWKDPAMVSIFVACILIGC 237

Query:   215 ILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWY 274
              +NFT   CT +NSA+TT+ VGV+K + + T+G V    V+  +L + G+++NT G + Y
Sbjct:   238 AMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIY 297

Query:   275 SYAXXXXXXXXXXXSDVEA 293
               A            D+E+
Sbjct:   298 CVAKFLETRRQSNYEDLES 316

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1923407 Slc35d3 "solute carrier family 35, member D3" [Mus musculus (taxid:10090)]

 Score = 286 (105.7 bits), Expect = 3.7e-25, P = 3.7e-25
 Identities = 69/259 (26%), Positives = 117/259 (45%)

Query:    36 RQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG 95
             R++G        L  A+    V++      +  L SL+G+++PMY+  KR  PL  ++ G
Sbjct:    60 RRLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIG 119

Query:    96 FFSGK-GKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSG 154
                 K G P+  V  +VL+T  G  +A  GD + D  GY   + +V     YLVL++K+ 
Sbjct:   120 VLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKAS 179

Query:   155 AEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGI 214
             A+     +   +  +  + P LV     + +                          +G 
Sbjct:   180 ADTEHGPLTAQYVIAVSATPLLVICSFASTD--SIHAWTFPGWKDPAMVSIFVACILIGC 237

Query:   215 ILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWY 274
              +NFT   CT +NSA+TT+ VGV+K + + T+G V    V+  +L + G+++NT G + Y
Sbjct:   238 AMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIY 297

Query:   275 SYAXXXXXXXXXXXSDVEA 293
               A            D+E+
Sbjct:   298 CVAKFLETRRQSNYEDLES 316

GO:0006810 "transport" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2QYX5 SLC35D3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 283 (104.7 bits), Expect = 8.9e-25, P = 8.9e-25
 Identities = 69/258 (26%), Positives = 116/258 (44%)

Query:    36 RQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG 95
             R++G        L  A+    V++      +  L SL+G+++PMY+  KR  PL  ++ G
Sbjct:    60 RRLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIG 119

Query:    96 FFSGK-GKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSG 154
                 K G P+  V  +VL+T  G  +A  GD + D  GY   + +V     YLVL++K+ 
Sbjct:   120 VLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVAGVLAVLVHAAYLVLIQKAS 179

Query:   155 AEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGI 214
             A+     +   +  +  + P LV     + +                          +G 
Sbjct:   180 ADTEHGPLTAQYVIAVSATPLLVVFSFASTD--SVRAWAFPGWRDPAMVCIFVACILIGC 237

Query:   215 ILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWY 274
              +NFT   CT +NSA+TT+ VGV+K + + T+G V    V+  +L + G+++NT G + Y
Sbjct:   238 AMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIY 297

Query:   275 SYAXXXXXXXXXXXSDVE 292
               A            D+E
Sbjct:   298 CVAKFLETRKQSNYEDLE 315

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NYU9 SLC35D3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 279 (103.3 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 69/258 (26%), Positives = 111/258 (43%)

Query:    36 RQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG 95
             R+ G        L  A+    V+          L SL+G+++PMY+  KR  PL  L+ G
Sbjct:    55 RRRGLAALPPFGLRLARPFAAVAALATLQSTLTLWSLRGLSLPMYVVFKRCLPLVTLLTG 114

Query:    96 FFSGK-GKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSG 154
                 + G P+  V ++VL+T  G  +A  GD + D  GY   + +V     YLVL++K+ 
Sbjct:   115 ALVLRDGMPSPGVLVAVLITTCGAALAGAGDLTGDAMGYVTGVLAVLIHAAYLVLIQKTS 174

Query:   155 AEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGI 214
              +     +   +  +  + PFL+  I                               +  
Sbjct:   175 VDSEYGPLTAQYAIAVSATPFLI--ICSFASMDSINVWSFPGWKDPAMVCIFIACVLISC 232

Query:   215 ILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWY 274
              +NFT   CT +NSA+TT+ VGV+K + + T+G V    V+   L + G+++NT G V Y
Sbjct:   233 AMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFNDVEPTKLFIAGVVVNTLGSVIY 292

Query:   275 SYAXXXXXXXXXXXSDVE 292
               A            D+E
Sbjct:   293 CVAKYIETRQQSTYEDLE 310

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1S688 SLC35D3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 68/258 (26%), Positives = 117/258 (45%)

Query:    36 RQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG 95
             R++G+       L  A+    V++      +  L SL+G+++PMY+  KR  PL  ++ G
Sbjct:    22 RRLGFIAVPPFGLSLARSFAGVTVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIG 81

Query:    96 FFSGK-GKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSG 154
                 K G P+  +  +VL+T  G  +A  GD + D  GY   + +V     YLVL++K+ 
Sbjct:    82 VLVLKNGVPSPGLA-AVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKAS 140

Query:   155 AEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGXXXXXXXXXXXXXXXXXXXXXXXMGI 214
             A+     +   +  +  + P LV     + +                          +G 
Sbjct:   141 ADTEHGPLTAQYVIAVSATPLLVICSFASTD--SIHAWTFPGWKDPAMVCIFVACILIGC 198

Query:   215 ILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWY 274
              +NFT   CT +NSA+TT+ VGV+K + + T+G V    V+  +L + G+++NT G + Y
Sbjct:   199 AMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIY 258

Query:   275 SYAXXXXXXXXXXXSDVE 292
               A            D+E
Sbjct:   259 CVAKYLETRKQSNYEDLE 276

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	296
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	2e-10
pfam08449	303	pfam08449, UAA, UAA transporter family	2e-08
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	4e-06
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	2e-04

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 59.9 bits (145), Expect = 2e-10
 Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 19/297 (6%)

Query: 3   MVFINKAVIMQYAHSMT--LLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF 60
           M   NK V+     +M   LL +Q L   + +   + +   + +      AKK  P+S  
Sbjct: 21  MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTK---AKKWFPISFL 77

Query: 61  YNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI 120
               +  +  SL+ + +P+Y   K LT + +         G+ T+   LS +L     V+
Sbjct: 78  LVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVV 137

Query: 121 AALGDFSFDL-------SGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSL 173
           A  GD             GY    T+      +++++ K          + MFYN+ LSL
Sbjct: 138 ATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSL 197

Query: 174 PFLVFLIIVTGEF-PGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTT 232
           P L+    +  ++ PG+L+   S  +    L+ + +S +  + +++    C  V S+ T 
Sbjct: 198 PILLSFSFLFEDWSPGNLANNLSVDS----LMAMFISGLCSVGISYCSAWCVRVTSSTTY 253

Query: 233 TIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAK-YQQKKKKLPK 288
           ++VG L  +     G V      V  L++  +L+    G  Y+ AK  +Q+ +K P 
Sbjct: 254 SMVGALNKLPIALAGLVFFDA-PVNFLSIFSILLGFLSGAIYAVAKSKKQQNQKDPA 309

Length = 309

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 15/237 (6%)

Query: 57  VSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG-FFSGKGKPTTQVTLSVLLTA 115
           V+ F+ ++V     +LK ++ P ++  K    + V++ G    GK   + Q  LS LL  
Sbjct: 71  VATFFLSSV-LNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQY-LSALLIT 128

Query: 116 TGCVIAALGDFSFDLSGYSMALTS---VFFQTMYLVL-------VEKSGAEDGLSSVEIM 165
            G +I  L       +      +    +      L++        EK   + G  S E+M
Sbjct: 129 LGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYKKYGKHSKEMM 188

Query: 166 FYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTI 225
           FY+  LSLPF +  ++         +  F   +      +L+ SL   +   F  +L + 
Sbjct: 189 FYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVGQFFVFYLISE 248

Query: 226 VNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQK 282
             +   T +  + K V  + L  V+L G  +      G L+   G   Y+Y K ++ 
Sbjct: 249 FGALTVTLVTTLRKFV--SLLLSVLLFGNPLTLQQWLGTLLVFLGIFLYAYLKKKKA 303

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 45.2 bits (108), Expect = 4e-06
 Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 6/150 (4%)

Query: 132 GYSMALTSVFFQTMYLVLVEK---SGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPG 188
           G+ +AL +     + L+L +K         L+ +E+++Y S ++   L+  ++ +  F  
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 189 SLSLLFSKSNSFSFLVILILSL--VMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTL 246
              +L    +  +   +L+L L  V+  + N + F      S LT+++ G +K V    L
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 247 GFVVLGGVQVRALNVTGLLINTAGGVWYSY 276
             ++  G  V  LN+ GL I   G V YSY
Sbjct: 121 SVIIF-GDPVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 63/280 (22%), Positives = 104/280 (37%), Gaps = 6/280 (2%)

Query: 11  IMQYAHSMTLLTLQQLATALLIQ-AGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFAL 69
           ++         TL  LA   L        G  K   I     K LLPV++ +      + 
Sbjct: 24  LLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSN 83

Query: 70  ASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFD 129
            SL  V +     IK + P   +V   F    +  + + LS+L    G  +A+  + SF+
Sbjct: 84  VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFN 143

Query: 130 LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGS 189
            +G+  A+ S        +  +K+     L    +  Y S +SL  L     +T   P  
Sbjct: 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFL 203

Query: 190 LSLLFSKSNSFSFLVILILSLV--MGIILNFTMFLCTIVN--SALTTTIVGVLKGVGSTT 245
                   +  +   I  +SLV  MG    +      ++   S LT ++   +K V    
Sbjct: 204 PHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRV-VVI 262

Query: 246 LGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKK 285
           +  ++  G ++    V G  I  AG   YS  K Q+ K K
Sbjct: 263 VVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKPK 302

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	296
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
PRK11272	292	putative DMT superfamily transporter inner membran	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.96
PRK15430	296	putative chloramphenical resistance permease RarD;	99.96
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.96
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.95
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.94
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.92
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.91
KOG1581	327	consensus UDP-galactose transporter related protei	99.89
KOG1580	337	consensus UDP-galactose transporter related protei	99.89
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.89
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.88
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.84
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.83
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.8
COG2962	293	RarD Predicted permeases [General function predict	99.79
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.79
KOG2765	416	consensus Predicted membrane protein [Function unk	99.77
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.77
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.76
KOG1582	367	consensus UDP-galactose transporter related protei	99.75
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.73
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.73
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.37
KOG2766	336	consensus Predicted membrane protein [Function unk	99.36
COG2510	140	Predicted membrane protein [Function unknown]	99.28
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.28
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.24
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.17
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.01
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.0
PRK15430	296	putative chloramphenical resistance permease RarD;	99.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.91
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.9
COG2510	140	Predicted membrane protein [Function unknown]	98.86
PLN00411	358	nodulin MtN21 family protein; Provisional	98.69
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.63
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.62
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.58
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.36
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.29
PRK11272	292	putative DMT superfamily transporter inner membran	98.28
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.28
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.24
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.24
COG2962	293	RarD Predicted permeases [General function predict	98.21
PRK13499	345	rhamnose-proton symporter; Provisional	98.15
PRK11689	295	aromatic amino acid exporter; Provisional	98.13
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.06
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.05
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.02
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.97
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.87
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.84
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.84
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.78
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.72
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.72
PRK11431	105	multidrug efflux system protein; Provisional	97.68
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.66
COG2076	106	EmrE Membrane transporters of cations and cationic	97.66
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.61
PRK13499	345	rhamnose-proton symporter; Provisional	97.59
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.46
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.45
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.37
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.27
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.19
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.09
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.08
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.04
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.99
COG2076	106	EmrE Membrane transporters of cations and cationic	96.71
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.65
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.59
PRK11431	105	multidrug efflux system protein; Provisional	96.59
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.52
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.35
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.19
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.6
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.93
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.48
KOG2765	416	consensus Predicted membrane protein [Function unk	94.29
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.25
KOG1581	327	consensus UDP-galactose transporter related protei	94.13
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.08
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	92.55
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	91.85
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	91.17
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	90.23
PF11044	49	TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 tran	89.96
KOG1580	337	consensus UDP-galactose transporter related protei	89.83
KOG2922	335	consensus Uncharacterized conserved protein [Funct	89.79
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	87.44
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	86.79
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	83.17

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=8e-39  Score=278.72  Aligned_cols=278  Identities=20%  Similarity=0.183  Sum_probs=228.5

Q ss_pred             eeeeeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHH
Q 022507            2 AMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYI   81 (296)
Q Consensus         2 ~~~~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~   81 (296)
                      +.+++||++++++++|..+++.|+.++.+.+.+....+..++++.++++++..++.|++++.+..++|.+++++++++++
T Consensus        16 ~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~   95 (302)
T TIGR00817        16 YFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTH   95 (302)
T ss_pred             HHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence            45789999999999999999999999988776664333344456788899999999999999999999999999999999


Q ss_pred             HHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCH
Q 022507           82 AIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSS  161 (296)
Q Consensus        82 ~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~  161 (296)
                      +++++.|+++++++++++|||++++++.+++++++|+++...++.+++..|+++++++++++++|.++.||..++++.|+
T Consensus        96 li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~  175 (302)
T TIGR00817        96 TIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDK  175 (302)
T ss_pred             HHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc
Confidence            99999999999999999999999999999999999999877666677888999999999999999999999887445699


Q ss_pred             HHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhc---ccCchhHHHHHHHHHH-HHHHHHHHHHHHHhccChhHHHHHhh
Q 022507          162 VEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFS---KSNSFSFLVILILSLV-MGIILNFTMFLCTIVNSALTTTIVGV  237 (296)
Q Consensus       162 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~sa~~~s~~~~  237 (296)
                      .+.+.|++..+.+.+.|.....++.........+   .......+...+..+. .....+...+.+++++||+++++.++
T Consensus       176 ~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~  255 (302)
T TIGR00817       176 TNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNC  255 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhh
Confidence            9999999999999999988765432211110001   0111122322333333 23333356678899999999999999


Q ss_pred             hhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHh
Q 022507          238 LKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQ  280 (296)
Q Consensus       238 l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~  280 (296)
                      ++|++++++|++++|| ++|..+++|+++++.|+.+|++.|.+
T Consensus       256 l~pv~~~~~~~~~lge-~lt~~~~~G~~lil~Gv~l~~~~k~~  297 (302)
T TIGR00817       256 MKRVVVIVVSILFFGT-KISPQQVFGTGIAIAGVFLYSRVKAQ  297 (302)
T ss_pred             hhhhheeeeehhhcCC-CCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999985 99999999999999999999876543

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=2e-35  Score=261.20  Aligned_cols=274  Identities=17%  Similarity=0.150  Sum_probs=227.4

Q ss_pred             eeeeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCccccccC--hhhhhHHHHHHHHHHHHHHHHhhhhcccchhHH
Q 022507            3 MVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAID--LMTAKKLLPVSLFYNANVAFALASLKGVNIPMY   80 (296)
Q Consensus         3 ~~~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~   80 (296)
                      .+++||++++++++|.+++++|++++.++...+...+.++.++.+  +++++..++.|+++.......+.|+++++++++
T Consensus        64 ~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~  143 (350)
T PTZ00343         64 YVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFT  143 (350)
T ss_pred             HHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence            467899999999999999999999998776655544433334442  457789999999988777778899999999999


Q ss_pred             HHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC---
Q 022507           81 IAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAED---  157 (296)
Q Consensus        81 ~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~---  157 (296)
                      ++++++.|+++++++++++|||++++++.+++++++|+++.+.+|.++++.|++++++|++++|+|+++.||..+++   
T Consensus       144 ~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~  223 (350)
T PTZ00343        144 HVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEI  223 (350)
T ss_pred             HHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            99999999999999999999999999999999999999999888888888999999999999999999999988754   


Q ss_pred             --CCCHHHHHHHHhhhHHHHHHHHHHHhCCch-h-hhhh---hhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChh
Q 022507          158 --GLSSVEIMFYNSFLSLPFLVFLIIVTGEFP-G-SLSL---LFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSAL  230 (296)
Q Consensus       158 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~  230 (296)
                        +.++.+...++.+.+.++++|.....+... . ....   ....+.....+..++.+++..+..+.+.+.++++++|.
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~  303 (350)
T PTZ00343        224 GENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQV  303 (350)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence              256777777888999999999877543211 1 1100   00111112334456677778888888888999999999


Q ss_pred             HHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          231 TTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       231 ~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      +.++.+++||+++++.|++++|| ++|+.+++|.++++.|+.+|+..
T Consensus       304 t~sv~~~lk~V~~iv~s~l~~ge-~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        304 THAVANTLKRVVIIVSSIIIFQT-QVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHhhhhHHHhCC-CCchHhHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999985 99999999999999999999875

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.7e-35  Score=246.61  Aligned_cols=282  Identities=40%  Similarity=0.591  Sum_probs=255.9

Q ss_pred             eeeeeeHHHHhcCCCchHHHH--HHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhH
Q 022507            2 AMVFINKAVIMQYAHSMTLLT--LQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPM   79 (296)
Q Consensus         2 ~~~~~nK~~l~~~~~p~~l~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~   79 (296)
                      .|++.||+++++|+||..+..  .|.+++.+.+......|..++|+++++..|+++|.++++.+.++.+..+++|+|++.
T Consensus        26 lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm  105 (314)
T KOG1444|consen   26 LMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPM  105 (314)
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchH
Confidence            478999999999999998555  999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 022507           80 YIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGL  159 (296)
Q Consensus        80 ~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~  159 (296)
                      +++++..+|+.+++.+..++|.|++...|.++..+.+|......+|.+++..|+.|++...++.+.+.++.|+..+..+.
T Consensus       106 ~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l  185 (314)
T KOG1444|consen  106 FTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANL  185 (314)
T ss_pred             HHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            99999999999999999999999999999999999999999999999999899999999999999999999999988889


Q ss_pred             CHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhh
Q 022507          160 SSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLK  239 (296)
Q Consensus       160 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~  239 (296)
                      +.+++++|+++++.+.+.......||.. .....++.+.+...+..+.++|+++++.+++.++|.+..||++.++++...
T Consensus       186 ~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n  264 (314)
T KOG1444|consen  186 NKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKN  264 (314)
T ss_pred             cceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhh
Confidence            9999999999999999999999998855 333334556677889999999999999999999999999999999999555


Q ss_pred             HHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhhhhcc
Q 022507          240 GVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKK  285 (296)
Q Consensus       240 pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~~~~~  285 (296)
                      ...+. ++.+.+||++.++...+|..+.+.|.++|++.+.++++.+
T Consensus       265 ~l~t~-l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  265 KLLTY-LGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP  309 (314)
T ss_pred             hHHHH-HHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence            55555 5555555679999999999999999999999876554433

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.2e-34  Score=246.84  Aligned_cols=277  Identities=25%  Similarity=0.365  Sum_probs=242.2

Q ss_pred             eeeeeeHHHHh--cCCCchHHHHHHHHHHHHHHHHHHhcCCcccccc-ChhhhhHHHHHHHHHHHHHHHHhhhhcccchh
Q 022507            2 AMVFINKAVIM--QYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAI-DLMTAKKLLPVSLFYNANVAFALASLKGVNIP   78 (296)
Q Consensus         2 ~~~~~nK~~l~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s   78 (296)
                      +..++||++++  +|++|.+++..+...+.+........+..+.++. ++..++..++.|++++.+.+++|.|++++|++
T Consensus        31 ~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~Vs  110 (316)
T KOG1441|consen   31 GVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVS  110 (316)
T ss_pred             eeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchh
Confidence            56789999999  7899999999999999998888888776665554 35677899999999999999999999999999


Q ss_pred             HHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHhc--cC
Q 022507           79 MYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSG--AE  156 (296)
Q Consensus        79 ~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~--~~  156 (296)
                      +++.++++.|+++.++++++.+|+++...+.+++....|+.+.+..|.++|+.|...++.+.+..+.++++.|+.+  |+
T Consensus       111 F~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~  190 (316)
T KOG1441|consen  111 FYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSKG  190 (316)
T ss_pred             HHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999998  46


Q ss_pred             CCCCHHHHHHHHhhhHHHHHH-HHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHH
Q 022507          157 DGLSSVEIMFYNSFLSLPFLV-FLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIV  235 (296)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~  235 (296)
                      ++.|++++..|+.+++...++ |.....+.... . ......++...+..++.+ ++++..|...+.+++++||.|.++.
T Consensus       191 ~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~  267 (316)
T KOG1441|consen  191 ESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAPWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVA  267 (316)
T ss_pred             cccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhh
Confidence            779999999999999999999 77665432221 0 111223334444444444 9999999999999999999999999


Q ss_pred             hhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhhh
Q 022507          236 GVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQK  282 (296)
Q Consensus       236 ~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~~  282 (296)
                      +.+|.++.+..|+++|+| +.|+.+..|+++.+.|+.+|++.|.+++
T Consensus       268 g~~K~~~vi~~s~~iF~~-pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  268 GHMKRIVVIVVSWLIFGN-PVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             ccceEEEEEEeEeeeecC-CCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            999999999999999996 9999999999999999999998876544

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1.2e-30  Score=230.02  Aligned_cols=275  Identities=12%  Similarity=0.114  Sum_probs=208.1

Q ss_pred             eeeeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCC--ccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHH
Q 022507            3 MVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGY--TKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMY   80 (296)
Q Consensus         3 ~~~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~   80 (296)
                      +..+.|..+..--.|..+.++|+.++++++.++...++  ++.++.+++++......|++......+.+.+++++|++.+
T Consensus        28 ~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa~~a  107 (358)
T PLN00411         28 ISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLA  107 (358)
T ss_pred             HHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence            45667888865445777999999999988877654322  2233445667777777887776666689999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHh------cCccCCccchhhhhhhhhhhHhhhcC-Cc-----------------------ccc-
Q 022507           81 IAIKRLTPLAVLVAGFFS------GKGKPTTQVTLSVLLTATGCVIAALG-DF-----------------------SFD-  129 (296)
Q Consensus        81 ~~l~~~~pv~~~l~~~~~------~~e~~~~~~~~~i~l~~~Gv~l~~~~-~~-----------------------~~~-  129 (296)
                      +++.++.|++++++++++      +|||+++.++.+++++++|++++... +.                       ..+ 
T Consensus       108 sll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (358)
T PLN00411        108 SAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDW  187 (358)
T ss_pred             HHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccH
Confidence            999999999999999999      69999999999999999999986531 10                       012 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCc-hhhhhhhhcccCchhHHHHHHH
Q 022507          130 LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEF-PGSLSLLFSKSNSFSFLVILIL  208 (296)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  208 (296)
                      ..|+.+++.++++||.|++.+|+..+++. +....++++..++.....+.....++. ...+    ....+... +.+++
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~-~~i~y  261 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW----IIHFDITL-ITIVT  261 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCcccc----eeccchHH-HHHHH
Confidence            35999999999999999999999877762 334556666666555555444443221 1110    01112232 33555


Q ss_pred             HHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhhhhc
Q 022507          209 SLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKK  284 (296)
Q Consensus       209 ~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~~~~  284 (296)
                      .++...+.+.++++++++.+|.+++++.+++|++++++|++++|| ++++.+++|+++++.|+.+..+.++++.++
T Consensus       262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE-~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~  336 (358)
T PLN00411        262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLND-SLYLGCLIGGILITLGFYAVMWGKANEEKD  336 (358)
T ss_pred             HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence            666666666778899999999999999999999999999999995 999999999999999999988765554333

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=1.7e-28  Score=213.55  Aligned_cols=259  Identities=30%  Similarity=0.382  Sum_probs=222.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhcCC-ccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHH
Q 022507           16 HSMTLLTLQQLATALLIQAGRQMGY-TKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVA   94 (296)
Q Consensus        16 ~p~~l~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~   94 (296)
                      +|..+++.|.+.+.+.........+ .+.++   ..++++++.++++..+..++|.|++|+|.+..+++|++.|++++++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~  107 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFKFPKSRK---IPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL  107 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhccccCCCc---ChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence            5889999999999988887766444 23333   3347889999999999999999999999999999999999999999


Q ss_pred             HHHhcCccCCccchhhhhhhhhhhHhhhcCCcc----cc------hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHH
Q 022507           95 GFFSGKGKPTTQVTLSVLLTATGCVIAALGDFS----FD------LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEI  164 (296)
Q Consensus        95 ~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~----~~------~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~  164 (296)
                      +.+++|||++++++.++++..+|+++...+|.+    .+      ..|+.+.+++.+++|.+.+++||..++++.++++.
T Consensus       108 ~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~  187 (303)
T PF08449_consen  108 GVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWEL  187 (303)
T ss_pred             HHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence            999999999999999999999999997654321    11      23999999999999999999999999999999999


Q ss_pred             HHHHhhhHHHHHHHHHHH--hCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHH
Q 022507          165 MFYNSFLSLPFLVFLIIV--TGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVG  242 (296)
Q Consensus       165 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~  242 (296)
                      ++|++..+.+...+....  .+|..+..+...   ..+..+..++..++.+...+.+.+..+++.||.+.++...+++++
T Consensus       188 mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~---~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~  264 (303)
T PF08449_consen  188 MFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS---AHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFL  264 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHH
Confidence            999999999999988887  556544433222   233456777888888888888888999999999999999999999


Q ss_pred             HHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhh
Q 022507          243 STTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQ  281 (296)
Q Consensus       243 ~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~  281 (296)
                      ++++++++||+ ++++.||+|.++++.|..+|++.|+|+
T Consensus       265 sillS~~~f~~-~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  265 SILLSVIIFGH-PLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHhcCC-cCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999985 999999999999999999999877554

; GO: 0055085 transmembrane transport

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.96  E-value=2.8e-27  Score=205.00  Aligned_cols=259  Identities=13%  Similarity=0.040  Sum_probs=203.4

Q ss_pred             eeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHH-HHHHHHHhhhh-cccchhHHHH
Q 022507            5 FINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFY-NANVAFALASL-KGVNIPMYIA   82 (296)
Q Consensus         5 ~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al-~~~~~s~~~~   82 (296)
                      +.-|+..++. .|..+.+.|++++.+++.++...++.+  ..++++++.....|.+. .....+.+.+. +++|++.+++
T Consensus        25 ~~~K~~~~~~-~p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~  101 (292)
T PRK11272         25 LVIRIGVESW-PPLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAV  101 (292)
T ss_pred             HHHHHHhccC-CHHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH
Confidence            3457666654 388899999999988877766543322  22455666666677664 46677788888 9999999999


Q ss_pred             HHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcC-CcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCH
Q 022507           83 IKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALG-DFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSS  161 (296)
Q Consensus        83 l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~  161 (296)
                      +.++.|+++++++.+ +|||++++++.+++++++|+.+...+ +.+.+..|+.++++++++||.|.+..||..++   ++
T Consensus       102 l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~  177 (292)
T PRK11272        102 VVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP---VG  177 (292)
T ss_pred             HHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cc
Confidence            999999999999986 69999999999999999999887643 33456689999999999999999999997543   34


Q ss_pred             HHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHH-HHHHHHHhccChhHHHHHhhhhH
Q 022507          162 VEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILN-FTMFLCTIVNSALTTTIVGVLKG  240 (296)
Q Consensus       162 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~sa~~~s~~~~l~p  240 (296)
                      .....++...+.+.+.+.....++...       ...+...|..+++.++.+.... .+++.++++.++.+++...+++|
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~P  250 (292)
T PRK11272        178 MMAGAAEMLAAGVVLLIASLLSGERLT-------ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNP  250 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence            556678888888877776655433211       1113345666777777766555 56778999999999999999999


Q ss_pred             HHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       241 i~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      +++.++|++++|| ++|+.+++|.++++.|+++.+..+
T Consensus       251 i~a~i~~~~~l~E-~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        251 VVAVLLGTGLGGE-TLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999985 999999999999999998876543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=3e-27  Score=205.05  Aligned_cols=253  Identities=15%  Similarity=0.123  Sum_probs=187.9

Q ss_pred             eeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhc----ccchhHH
Q 022507            5 FINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLK----GVNIPMY   80 (296)
Q Consensus         5 ~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~----~~~~s~~   80 (296)
                      ...|..+++++ |..+.+.|+.++.+++.++..  +.+.++   ++.+..+..++.+..+..+.+.+++    +++++.+
T Consensus        21 ~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~~--~~~~~~---~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a   94 (295)
T PRK11689         21 GLIRGVSESLG-PVGGAAMIYSVSGLLLLLTVG--FPRLRQ---FPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEV   94 (295)
T ss_pred             HHHHHHHccCC-hHHHHHHHHHHHHHHHHHHcc--cccccc---ccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHH
Confidence            45788887765 899999999999888776532  111112   2223444445555566666666664    5688889


Q ss_pred             HHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCc-----------ccchhHHHHHHHHHHHHHHHHHH
Q 022507           81 IAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDF-----------SFDLSGYSMALTSVFFQTMYLVL  149 (296)
Q Consensus        81 ~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~-----------~~~~~G~~~~l~s~~~~a~~~v~  149 (296)
                      .++.++.|+++.+++++++|||++++++.+++++++|++++..++.           +.+..|+.+++.++++||.|.++
T Consensus        95 ~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~  174 (295)
T PRK11689         95 GMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNV  174 (295)
T ss_pred             HHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998765432           12346999999999999999999


Q ss_pred             HHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccCh
Q 022507          150 VEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSA  229 (296)
Q Consensus       150 ~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa  229 (296)
                      .||..+++  ++....+   ..+...+.+.....++ +.       ...+...|..+++.++.+...+.++++++|+.++
T Consensus       175 ~k~~~~~~--~~~~~~~---~~~~~~l~~~~~~~~~-~~-------~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a  241 (295)
T PRK11689        175 TRKYARGK--NGITLFF---ILTALALWIKYFLSPQ-PA-------MVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNM  241 (295)
T ss_pred             HhhccCCC--CchhHHH---HHHHHHHHHHHHHhcC-cc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCH
Confidence            99986554  5554322   2233333332333222 11       1113344555566676666666888899999999


Q ss_pred             hHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          230 LTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       230 ~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      .+++...+++|++++++|++++|| ++++.+++|.++++.|+.+....
T Consensus       242 ~~~s~~~~l~Pv~a~i~~~~~lgE-~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        242 TLLATASYFTPVLSAALAALLLST-PLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHhHHHHhhh
Confidence            999999999999999999999985 99999999999999998877543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.96  E-value=6.6e-27  Score=199.61  Aligned_cols=252  Identities=15%  Similarity=0.121  Sum_probs=200.4

Q ss_pred             eeeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHH-HHHHHHHHHhhhhcccchhHHHH
Q 022507            4 VFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSL-FYNANVAFALASLKGVNIPMYIA   82 (296)
Q Consensus         4 ~~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~al~~~~~s~~~~   82 (296)
                      .+..|+.+++...|..+.+.|.+++.+.+.+....+      .++++++..+..+. ....+..+.+.|++++|++.+++
T Consensus         5 ~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i   78 (260)
T TIGR00950         5 GVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL   78 (260)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence            356788887765567799999998888777655433      12333344555554 46788899999999999999999


Q ss_pred             HHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCC-cccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCH
Q 022507           83 IKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGD-FSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSS  161 (296)
Q Consensus        83 l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~  161 (296)
                      +.++.|+++++++.+++|||++++++.++.++++|+.++..++ .+.+..|+.++++++++++.+.++.|+..++++.++
T Consensus        79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~  158 (260)
T TIGR00950        79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPEL  158 (260)
T ss_pred             HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchH
Confidence            9999999999999999999999999999999999999876543 445678999999999999999999999876654345


Q ss_pred             HHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHH-HHHHHHHHHhccChhHHHHHhhhhH
Q 022507          162 VEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGII-LNFTMFLCTIVNSALTTTIVGVLKG  240 (296)
Q Consensus       162 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~sa~~~s~~~~l~p  240 (296)
                      .....++...+.+.+.+.....++...         .+...+..++..++++.. .+.+++++.++.++.+++.+.+++|
T Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~p  229 (260)
T TIGR00950       159 LQFTGWVLLLGALLLLPFAWFLGPNPQ---------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEP  229 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCC---------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence            555556777888888877666543221         123445556666766654 4466779999999999999999999


Q ss_pred             HHHHHhhheeeCCcccchhhHHHHHHHHHHh
Q 022507          241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGG  271 (296)
Q Consensus       241 i~~~~~~~~~~~e~~~t~~~~~G~~lil~g~  271 (296)
                      +++.+++++++|| ++++.+++|.++++.|+
T Consensus       230 v~~~ll~~~~~~E-~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       230 LVALLLGLLILGE-TLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHhCC-CCCHHHHHHHHHHHHhc
Confidence            9999999999985 99999999999999885

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.96  E-value=3.2e-26  Score=198.69  Aligned_cols=259  Identities=12%  Similarity=0.023  Sum_probs=186.0

Q ss_pred             eHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCC-ccc--ccc-ChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHH
Q 022507            7 NKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGY-TKS--KAI-DLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIA   82 (296)
Q Consensus         7 nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~-~~~--~~~-~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~   82 (296)
                      .|.. .+.+ |..+.++|.+++.+++.++...++ .+.  ++. ++++.......++..+.+..++++|++++|++.+++
T Consensus        27 ~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~  104 (296)
T PRK15430         27 FKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASL  104 (296)
T ss_pred             HHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence            4654 3444 778999999999876665543221 111  111 333333334455667788999999999999999999


Q ss_pred             HHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHH
Q 022507           83 IKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSV  162 (296)
Q Consensus        83 l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~  162 (296)
                      +.++.|+++++++++++|||+++++|.+++++++|++++..++.+.    ..+++.++++||.|.+..||..++...+..
T Consensus       105 l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~  180 (296)
T PRK15430        105 GYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGML  180 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHH
Confidence            9999999999999999999999999999999999999876433222    256888999999999999987543222333


Q ss_pred             HHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHH
Q 022507          163 EIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVG  242 (296)
Q Consensus       163 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~  242 (296)
                      ....++.+.+.+...+.   ..+....     ..+.+...+..++..|+.+...+.+++.++++.+|.+++.+.+++|++
T Consensus       181 ~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~  252 (296)
T PRK15430        181 IETMWLLPVAAIYLFAI---ADSSTSH-----MGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTL  252 (296)
T ss_pred             HHHHHHHHHHHHHHHHH---ccCCccc-----ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence            33445554444443221   1111100     011112223445556666667778888999999999999999999999


Q ss_pred             HHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHh
Q 022507          243 STTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQ  280 (296)
Q Consensus       243 ~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~  280 (296)
                      +.++|++++|| ++++.+++|+++++.|+.+...+...
T Consensus       253 a~~~g~l~l~E-~~~~~~~~G~~lI~~~~~v~~~~~~~  289 (296)
T PRK15430        253 MFLLAVTFYGE-KPGADKMVTFAFIWVALAIFVMDAIY  289 (296)
T ss_pred             HHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999985 99999999999999998887765433

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.96  E-value=5.8e-26  Score=197.44  Aligned_cols=263  Identities=11%  Similarity=0.089  Sum_probs=192.0

Q ss_pred             eeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHH-HHHHHHhhhhcc-cchhHHHH
Q 022507            5 FINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYN-ANVAFALASLKG-VNIPMYIA   82 (296)
Q Consensus         5 ~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~al~~-~~~s~~~~   82 (296)
                      ...|..+++.+ |..+.++|+.++++.+..+...+     +.++   +..+..+++.. ....+.+.++++ .|++.+.+
T Consensus        21 ~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~~~-----~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~   91 (299)
T PRK11453         21 VVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVARP-----KVPL---NLLLGYGLTISFGQFAFLFCAINFGMPAGLASL   91 (299)
T ss_pred             HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhcCC-----CCch---HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence            45688787754 88899999998776655443211     1222   33444455433 444466778887 68999999


Q ss_pred             HHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCC---cccchhHHHHHHHHHHHHHHHHHHHHHhccCCC-
Q 022507           83 IKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGD---FSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDG-  158 (296)
Q Consensus        83 l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~-  158 (296)
                      +.++.|+++.+++++++|||++++++.+++++++|+.++..++   .+.+..|+.+++.++++++.|.++.||..++.+ 
T Consensus        92 l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~  171 (299)
T PRK11453         92 VLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTR  171 (299)
T ss_pred             HHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCc
Confidence            9999999999999999999999999999999999999876532   223457999999999999999999999765432 


Q ss_pred             CCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHH-HHHHHHHhccChhHHHHHhh
Q 022507          159 LSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILN-FTMFLCTIVNSALTTTIVGV  237 (296)
Q Consensus       159 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~sa~~~s~~~~  237 (296)
                      .+......++...+.+.........++.......  ....+...|..+++.|+++.... .++++.+++.++.+++.+.+
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~  249 (299)
T PRK11453        172 PAVMSLVVWSALIPIIPFFVASLILDGSATMIHS--LVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSL  249 (299)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            2233444555555444333333332221111000  11224566778888888888777 55668899999999999999


Q ss_pred             hhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHH
Q 022507          238 LKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKY  279 (296)
Q Consensus       238 l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~  279 (296)
                      ++|+++.++|++++|| +++..+++|+++++.|+.+..+.++
T Consensus       250 l~Pv~a~~~~~l~lgE-~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        250 LVPVVGLASAALLLDE-RLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHHHhcchh
Confidence            9999999999999985 9999999999999999987765443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=8.9e-26  Score=195.63  Aligned_cols=251  Identities=15%  Similarity=0.110  Sum_probs=193.1

Q ss_pred             eeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHH
Q 022507            5 FINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIK   84 (296)
Q Consensus         5 ~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~   84 (296)
                      ...|+..++.+ |..+.++|++++.+++.++...++   ++.++++++..+..|.+......+.+++++++|++.++++.
T Consensus        29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~  104 (293)
T PRK10532         29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE  104 (293)
T ss_pred             HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            35788887755 777999999999988776653222   13456666778888888888888999999999999999999


Q ss_pred             hhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcC--C-cccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCH
Q 022507           85 RLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALG--D-FSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSS  161 (296)
Q Consensus        85 ~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~--~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~  161 (296)
                      ++.|+++++++    +||++.  +..+.++++|+.++...  + .+.+..|+.+++.+++++|.|.+..||..+++  ++
T Consensus       105 ~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~  176 (293)
T PRK10532        105 FTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEH--GP  176 (293)
T ss_pred             HHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccC--Cc
Confidence            99999999887    356554  44567788999876532  2 23356799999999999999999999987654  55


Q ss_pred             HHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHH-HHHHHHHhccChhHHHHHhhhhH
Q 022507          162 VEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILN-FTMFLCTIVNSALTTTIVGVLKG  240 (296)
Q Consensus       162 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~sa~~~s~~~~l~p  240 (296)
                      ... .++...+...+.|.....++..         ..+...+...+..|+++...+ .++++++++.+|.+++.+.+++|
T Consensus       177 ~~~-~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~P  246 (293)
T PRK10532        177 ATV-AIGSLIAALIFVPIGALQAGEA---------LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEP  246 (293)
T ss_pred             hHH-HHHHHHHHHHHHHHHHHccCcc---------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHH
Confidence            555 4566667777777665532200         112333444556777776666 46679999999999999999999


Q ss_pred             HHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          241 VGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       241 i~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      +++.++|++++|| ++++.+++|.++++.|+..+....
T Consensus       247 v~a~l~~~l~lgE-~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        247 ALAAVSGMIFLGE-TLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999985 999999999999999999987543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.95  E-value=1.6e-27  Score=187.74  Aligned_cols=274  Identities=23%  Similarity=0.357  Sum_probs=236.9

Q ss_pred             eeeeeeHHHHhcCCCc--hHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhH
Q 022507            2 AMVFINKAVIMQYAHS--MTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPM   79 (296)
Q Consensus         2 ~~~~~nK~~l~~~~~p--~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~   79 (296)
                      .|++-|||++++-+|.  ..+.+.|.+++.+.+......+..+.|   .++.+.|++.+++....++....+++|.+++.
T Consensus        20 lmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpi   96 (309)
T COG5070          20 LMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTSSKSLQYLAVPI   96 (309)
T ss_pred             HHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhcccceeeeeeeH
Confidence            3678899999975555  458999999999888887766654444   45668999999999999999999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCcc--------cchhHHHHHHHHHHHHHHHHHHHH
Q 022507           80 YIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFS--------FDLSGYSMALTSVFFQTMYLVLVE  151 (296)
Q Consensus        80 ~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~s~~~~a~~~v~~k  151 (296)
                      +++.+.++.+.++..+..++|.|++..+..+.+++++.-+...++|.+        .| .|++|+...+++.+++....|
T Consensus        97 YTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~NclssaafVL~mr  175 (309)
T COG5070          97 YTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSSAAFVLIMR  175 (309)
T ss_pred             HHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhHHHHHHHHH
Confidence            999999999999999999999999999999999999999888887763        33 799999999999999999999


Q ss_pred             HhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhH
Q 022507          152 KSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALT  231 (296)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~  231 (296)
                      +..+-.+....+.++|+++++.|+++..++..+| |+..+.  ....+.........+|+++++..++.-++++.+|+++
T Consensus       176 kri~ltNf~d~dtmfYnNllslPiL~~~s~~~ed-ws~~n~--annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTt  252 (309)
T COG5070         176 KRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFED-WSPGNL--ANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTT  252 (309)
T ss_pred             HhhcccccchhhHHHHhhhHHHHHHHHHHHHhcc-CCcchh--hcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhH
Confidence            9877666788999999999999999999998866 433221  2222344466788999999999999999999999999


Q ss_pred             HHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhhhh
Q 022507          232 TTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKK  283 (296)
Q Consensus       232 ~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~~~  283 (296)
                      .|+++.+++....+.|.++|| ++.+...+..+.+-..+...|...+.++++
T Consensus       253 ySMvGALNKlp~alaGlvffd-ap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         253 YSMVGALNKLPIALAGLVFFD-APVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             HHHHHHhhhChHHHhhhhhcC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999997 599999999999999999999998766443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=1.8e-28  Score=198.62  Aligned_cols=286  Identities=20%  Similarity=0.273  Sum_probs=252.0

Q ss_pred             CeeeeeeHHHHhc----CCCchHHHHHHHHHHHHHHHHHHhc-----CCcccc--ccChhhhhHHHHHHHHHHHHHHHHh
Q 022507            1 MAMVFINKAVIMQ----YAHSMTLLTLQQLATALLIQAGRQM-----GYTKSK--AIDLMTAKKLLPVSLFYNANVAFAL   69 (296)
Q Consensus         1 ~~~~~~nK~~l~~----~~~p~~l~~~r~~~~~~~l~~~~~~-----~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~   69 (296)
                      +++++.||++++.    .+-|.+++..|-++...+...+...     .....+  +++.+..++.+|.++.+.+.+.+.|
T Consensus        41 I~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnn  120 (347)
T KOG1442|consen   41 IGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNN  120 (347)
T ss_pred             ehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccc
Confidence            4688999999984    5789999999998887776665432     112222  3567778899999999999999999


Q ss_pred             hhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCC---cccchhHHHHHHHHHHHHHHH
Q 022507           70 ASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGD---FSFDLSGYSMALTSVFFQTMY  146 (296)
Q Consensus        70 ~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~~a~~  146 (296)
                      .+++|++++++.+=+++..+|+.+++++++|+|-+..-..++.+.++|.-+.+..|   .+.++.|.++++.|+++.|+.
T Consensus       121 lcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAln  200 (347)
T KOG1442|consen  121 LCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALN  200 (347)
T ss_pred             eehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998876655   456789999999999999999


Q ss_pred             HHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 022507          147 LVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIV  226 (296)
Q Consensus       147 ~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  226 (296)
                      .++.||.....+..-|..++|+++.+.++.+|...+.||.....+  +++.++..+|....++|++++.+++...+-+|.
T Consensus       201 aiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~--~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~  278 (347)
T KOG1442|consen  201 AIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG--FPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKV  278 (347)
T ss_pred             HHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC--cccchHHHHHHHHHHHHHHHHHhhheeeEEEEe
Confidence            999999988877888999999999999999999999999877655  356667889999999999999999988888999


Q ss_pred             cChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhhhhccCCcc
Q 022507          227 NSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKKKKLPKS  289 (296)
Q Consensus       227 ~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~~~~~~~~~  289 (296)
                      +||.|..+.+..|.....++++.+++| .-+..-|-|-++++.|..+|.+.|+++++++.++.
T Consensus       279 TSplThnISgTAka~aQTvlAv~~y~E-~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~  340 (347)
T KOG1442|consen  279 TSPLTHNISGTAKAAAQTVLAVAYYSE-TKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQR  340 (347)
T ss_pred             cccceeeecHhHHHHHHHHHHHHHHHH-HhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCC
Confidence            999999999999999999999999985 99999999999999999999998888776655543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.94  E-value=5e-25  Score=190.49  Aligned_cols=267  Identities=13%  Similarity=0.050  Sum_probs=200.3

Q ss_pred             eeHHHHhc-CCCchHHHHHHHHHHHHHHHHHHhcCC--ccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHH
Q 022507            6 INKAVIMQ-YAHSMTLLTLQQLATALLIQAGRQMGY--TKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIA   82 (296)
Q Consensus         6 ~nK~~l~~-~~~p~~l~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~   82 (296)
                      .++++-++ .+.|..-+++-.+...++.......++  .+..+..++++++.+..+++-...+++.+.|++|++++.+++
T Consensus        31 ~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~l  110 (334)
T PF06027_consen   31 FSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQL  110 (334)
T ss_pred             HHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHh
Confidence            34444443 456766444444333332222222221  122222345557778889999999999999999999999999


Q ss_pred             HHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCc---------ccchhHHHHHHHHHHHHHHHHHHHHHh
Q 022507           83 IKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDF---------SFDLSGYSMALTSVFFQTMYLVLVEKS  153 (296)
Q Consensus        83 l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~v~~k~~  153 (296)
                      +.+++.+++++++++++|||+++.++.+++++++|++++...|.         +....|+++++.++++||.++++.|+.
T Consensus       111 L~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~  190 (334)
T PF06027_consen  111 LDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKL  190 (334)
T ss_pred             hhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999998765432         234789999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHH
Q 022507          154 GAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTT  233 (296)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s  233 (296)
                      .+++  +..+......+++.++..+...+. |..+..    ..+++...+...+.-++.-+..+...-..++..||+...
T Consensus       191 v~~~--~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~----~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~n  263 (334)
T PF06027_consen  191 VKKA--PRVEFLGMLGLFGFIISGIQLAIL-ERSGIE----SIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFN  263 (334)
T ss_pred             cccC--CHHHHHHHHHHHHHHHHHHHHHhe-ehhhhh----ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceee
Confidence            9875  788888888889999888877765 322322    222333434444444444444444555678999999888


Q ss_pred             HHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHh
Q 022507          234 IVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQ  280 (296)
Q Consensus       234 ~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~  280 (296)
                      +...+..+.+++++++++|+ ++++..++|.+++++|.++|+..+.+
T Consensus       264 LsLLTsd~~ali~~i~~f~~-~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  264 LSLLTSDFYALIIDIFFFGY-KFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             hHHHHhhHHHHHHHHHhcCc-cccHHHHHHHHHHHHHhheEEccCCc
Confidence            88888999999999999995 99999999999999999999876543

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.92  E-value=1.2e-24  Score=179.38  Aligned_cols=274  Identities=19%  Similarity=0.241  Sum_probs=224.8

Q ss_pred             eeeeeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcC-Cccc---cccCh-hhhhHHHHHHHHHHHHHHHHhhhhcccc
Q 022507            2 AMVFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQMG-YTKS---KAIDL-MTAKKLLPVSLFYNANVAFALASLKGVN   76 (296)
Q Consensus         2 ~~~~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~-~~~~---~~~~~-~~~~~~l~~~~~~~~~~~~~~~al~~~~   76 (296)
                      ++.+++|+.-.++++|..++..|+++-.++........ ..++   ...+| +.+++..|.++..+.++.+.|++++|++
T Consensus        30 ~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVt  109 (349)
T KOG1443|consen   30 GLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVT  109 (349)
T ss_pred             HHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeee
Confidence            45678999999999999999999988776665554321 1122   24444 4456677999999999999999999999


Q ss_pred             hhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 022507           77 IPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAE  156 (296)
Q Consensus        77 ~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~  156 (296)
                      .+.+++.|+++++|+.+++..+.-||+++.-.+.+.++..|+++.+..+.+++..|..++..++++.++.+.+.|+++++
T Consensus       110 lSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~  189 (349)
T KOG1443|consen  110 LSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRN  189 (349)
T ss_pred             eeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhc
Confidence            99999999999999999999888899999999999999999999999999999999999999999999999999998876


Q ss_pred             CC---CCHHHHHHHHhhhHHHHHHHHHHHhCC-chhhhhhhhcccCc---hhHHHHHHHHHHHHHHHHHHHHHHHhccCh
Q 022507          157 DG---LSSVEIMFYNSFLSLPFLVFLIIVTGE-FPGSLSLLFSKSNS---FSFLVILILSLVMGIILNFTMFLCTIVNSA  229 (296)
Q Consensus       157 ~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa  229 (296)
                      .+   .+|....++..+.....++|.....+. .....+..+....+   ......+.+.|..+++...+-+....+++.
T Consensus       190 ~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~  269 (349)
T KOG1443|consen  190 QPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSS  269 (349)
T ss_pred             CccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccc
Confidence            43   578888888888877777887766533 22222211111112   223344567788888888888888999999


Q ss_pred             hHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          230 LTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       230 ~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      .+.++.+..|.+.+.+++..+.+| +++..+|.|..+++.|+..+.+
T Consensus       270 ltlSIaGI~Kel~tl~la~ii~~d-~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  270 LTLSIAGIVKEVCTLLLAIIILKD-QLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             eeeeHHHHHHHHHHHHHHHHHhhc-chhhhHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999986 9999999999999999999944

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.91  E-value=1.9e-22  Score=173.95  Aligned_cols=244  Identities=14%  Similarity=0.054  Sum_probs=171.7

Q ss_pred             HHHHHHHHHHHHHHHHhcC--CccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHh
Q 022507           21 LTLQQLATALLIQAGRQMG--YTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFS   98 (296)
Q Consensus        21 ~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~   98 (296)
                      ...+.....+.+.++...+  +.+.++.+++++...+..+.....+..+.+.++++.|++.++.+.++.|++++++++++
T Consensus        31 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~  110 (281)
T TIGR03340        31 LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT  110 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH
Confidence            4555555555555544332  22222233444445555666678899999999999999999999999999999999999


Q ss_pred             cCccCCccchhhhhhhhhhhHhhhcCCc-ccchhHHHHHHHHHHHHHHHHHHHHHhccCCC--CCHHHHHHHHhhhH-HH
Q 022507           99 GKGKPTTQVTLSVLLTATGCVIAALGDF-SFDLSGYSMALTSVFFQTMYLVLVEKSGAEDG--LSSVEIMFYNSFLS-LP  174 (296)
Q Consensus        99 ~~e~~~~~~~~~i~l~~~Gv~l~~~~~~-~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~--~~~~~~~~~~~~~~-~~  174 (296)
                      +|||+++++|.++.+++.|+.++..++. +.+..|+.+++.++++++.|.+..|+..++.+  .+......++.... .+
T Consensus       111 ~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (281)
T TIGR03340       111 LGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWP  190 (281)
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHH
Confidence            9999999999999999999998765432 34557888999999999999999887643321  11111222222222 12


Q ss_pred             HHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCc
Q 022507          175 FLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGV  254 (296)
Q Consensus       175 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~  254 (296)
                      ...+ ....++..       ....+...+..+...++.+...+.++++++++.++.+++...+++|+++.++|++++|| 
T Consensus       191 ~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE-  261 (281)
T TIGR03340       191 FLLL-YLKRHGRS-------MFPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNE-  261 (281)
T ss_pred             HHHH-HHHHhccc-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCC-
Confidence            1111 11111110       00112233444455555565666778899999999999999999999999999999985 


Q ss_pred             ccchhhHHHHHHHHHHhHH
Q 022507          255 QVRALNVTGLLINTAGGVW  273 (296)
Q Consensus       255 ~~t~~~~~G~~lil~g~~~  273 (296)
                      +++..+++|.++++.|+.+
T Consensus       262 ~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       262 RWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             CccHHHHHHHHHHHHhHHh
Confidence            9999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.89  E-value=2.1e-21  Score=160.43  Aligned_cols=262  Identities=18%  Similarity=0.140  Sum_probs=221.8

Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHH
Q 022507           13 QYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVL   92 (296)
Q Consensus        13 ~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~   92 (296)
                      +|.+|.++.+.|-+.+.++..........+.+  .+..+++....++....+-.+++.|++|++-.+-++.+++--+.++
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~--~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm  124 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKELS--GVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM  124 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcccccCC--CCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence            46789999999999999888776655443332  2334477888899999999999999999999999999999999999


Q ss_pred             HHHHHhcCccCCccchhhhhhhhhhhHhhhcC---C------cccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHH
Q 022507           93 VAGFFSGKGKPTTQVTLSVLLTATGCVIAALG---D------FSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVE  163 (296)
Q Consensus        93 l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~---~------~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~  163 (296)
                      +.+.++.|+|++..++++..+..+|+-+....   +      ...+++|+.++..+.++.++.+..++++.++++.+++.
T Consensus       125 lmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~  204 (327)
T KOG1581|consen  125 LMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLH  204 (327)
T ss_pred             HHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhH
Confidence            99999999999999999999999999886542   1      12358999999999999999999999999999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHH
Q 022507          164 IMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGS  243 (296)
Q Consensus       164 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~  243 (296)
                      ++++.++.+++.-.......|...+..+....   ++..++=+++.+.++...+.+.+.-++++++.+.+.+...+.+++
T Consensus       205 mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~---hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~s  281 (327)
T KOG1581|consen  205 MMFGVNLFSAILNGTYLILQGHLLPAVSFIKE---HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVS  281 (327)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCCchHHHHHHc---ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHH
Confidence            99999999999888876666655554443222   244555667777788888999999999999999999999999999


Q ss_pred             HHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHh
Q 022507          244 TTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQ  280 (296)
Q Consensus       244 ~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~  280 (296)
                      ++++.+.+|+ ++++.||+|..+++.|..+-...+.+
T Consensus       282 i~lS~i~f~h-~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  282 IMLSCIVFGH-PLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHhCC-ccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999996 99999999999999998887776655

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.89  E-value=9.2e-23  Score=162.24  Aligned_cols=257  Identities=15%  Similarity=0.122  Sum_probs=216.6

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHH
Q 022507           14 YAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLV   93 (296)
Q Consensus        14 ~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l   93 (296)
                      |.|..+++++|.....+..-++...+  +..+.++..-+.....+.-|-+.+...|.|++++|..+..+-++..|+-+++
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~ir--~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi  127 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFLIR--KKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI  127 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhheeec--ccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence            45566688888888777665544432  2233443344778888899999999999999999999999999999999999


Q ss_pred             HHHHhcCccCCccchhhhhhhhhhhHhhhcCC-------cccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHH
Q 022507           94 AGFFSGKGKPTTQVTLSVLLTATGCVIAALGD-------FSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMF  166 (296)
Q Consensus        94 ~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~-------~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~  166 (296)
                      ++.++.+++++++++++++...+|+++....+       .+....|-++.++|.-..+.....+.|+...+..+...+++
T Consensus       128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~  207 (337)
T KOG1580|consen  128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMF  207 (337)
T ss_pred             eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHH
Confidence            99999999999999999999999999976532       12234899999999999999999999998888888899999


Q ss_pred             HHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHh
Q 022507          167 YNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTL  246 (296)
Q Consensus       167 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~  246 (296)
                      |.++-+.+.+....+..||.|+.......   .+..|+-+.+.++.+.+.+.+.+..+..++|.+-|++.+.++.++++.
T Consensus       208 ~~NlwStL~Lg~g~lfTGElweF~yF~~R---hP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~  284 (337)
T KOG1580|consen  208 YTNLWSTLYLGAGLLFTGELWEFFYFVQR---HPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILI  284 (337)
T ss_pred             HHHHHHHHHhhhhheehhhHHHHHHHHHh---ccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHH
Confidence            99999999999999999998887553222   345566777888889899999999999999999999999999999999


Q ss_pred             hheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          247 GFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       247 ~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      |+++|++ +++..||+|.+++..|...=..
T Consensus       285 SVllf~n-pls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  285 SVLLFNN-PLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHhcC-cCcHHHHHHHHHHHHHhhhHhh
Confidence            9999985 9999999999999999766443

>TIGR00688 rarD rarD protein

Probab=99.89  E-value=9.6e-21  Score=161.22  Aligned_cols=229  Identities=11%  Similarity=0.057  Sum_probs=160.2

Q ss_pred             eeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHh-cCCcc-----ccccChh-hhhHHHHHHHHHHHHHHHHhhhhcccch
Q 022507            5 FINKAVIMQYAHSMTLLTLQQLATALLIQAGRQ-MGYTK-----SKAIDLM-TAKKLLPVSLFYNANVAFALASLKGVNI   77 (296)
Q Consensus         5 ~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~-~~~~~-----~~~~~~~-~~~~~l~~~~~~~~~~~~~~~al~~~~~   77 (296)
                      +..|+ +.+. .|..+.++|.+++.+++.+... .++++     .++.+++ +.......+++.+.+..++++|++++|+
T Consensus        19 ~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~   96 (256)
T TIGR00688        19 YYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSS   96 (256)
T ss_pred             HHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence            34576 4444 3778999999999877665442 22211     1112222 2334566777788999999999999999


Q ss_pred             hHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 022507           78 PMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAED  157 (296)
Q Consensus        78 s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~  157 (296)
                      ++++++.++.|+++++++++++|||++++++.++.++++|++++..++.+.+    .+++.+++++|.|.+..||..++ 
T Consensus        97 ~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~~-  171 (256)
T TIGR00688        97 LEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKNT-  171 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCCC-
Confidence            9999999999999999999999999999999999999999998765432222    45788999999999999987543 


Q ss_pred             CCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhh
Q 022507          158 GLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGV  237 (296)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~  237 (296)
                        +..+.... .....+...+.....++ +..     +...+...|..++..|+.+...+.+++.++|+.++.++++..+
T Consensus       172 --~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~y  242 (256)
T TIGR00688       172 --DLAGFCLE-TLSLMPVAIYYLLQTDF-ATV-----QQTNPFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQY  242 (256)
T ss_pred             --CcchHHHH-HHHHHHHHHHHHHHhcc-Ccc-----cccCchhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence              22222221 12222222222112111 110     1111223466666777777777788889999999999999999


Q ss_pred             hhHHHHHHhhhe
Q 022507          238 LKGVGSTTLGFV  249 (296)
Q Consensus       238 l~pi~~~~~~~~  249 (296)
                      ++|+++.+++++
T Consensus       243 l~Pv~~~~~~~~  254 (256)
T TIGR00688       243 IGPTIMMLCVSF  254 (256)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999875

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.88  E-value=4e-20  Score=159.91  Aligned_cols=247  Identities=18%  Similarity=0.180  Sum_probs=185.4

Q ss_pred             chH-HHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHH
Q 022507           17 SMT-LLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG   95 (296)
Q Consensus        17 p~~-l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~   95 (296)
                      |.. ..+.|...+..........+..+..+..++..+..+..++.......+.+.++++++++.++.+.++.|+++.+++
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~  114 (292)
T COG0697          35 PFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLA  114 (292)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence            444 6666988888774444433321111111112245555666678899999999999999999999999999999999


Q ss_pred             H-HhcCccCCccchhhhhhhhhhhHhhhcCCcccc---hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHH-HHhh
Q 022507           96 F-FSGKGKPTTQVTLSVLLTATGCVIAALGDFSFD---LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMF-YNSF  170 (296)
Q Consensus        96 ~-~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~~---~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~-~~~~  170 (296)
                      . +++|||++++++.++.+.++|++++..++...+   ..|+.+++.+++++|.+.+..|+.. +  .++..... ++..
T Consensus       115 ~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~--~~~~~~~~~~~~~  191 (292)
T COG0697         115 VLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R--LGPVTLALLLQLL  191 (292)
T ss_pred             HHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--CChHHHHHHHHHH
Confidence            7 777999999999999999999999887665543   5899999999999999999999986 3  36666665 4433


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHH-HHHHHHHHHhccChhHHHHHhhhhHHHHHHhhhe
Q 022507          171 LSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGII-LNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFV  249 (296)
Q Consensus       171 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~  249 (296)
                        ............+..        ...+...+..+...|+.+.. .+.+++...++.++...+...+++|+.+.+++++
T Consensus       192 --~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l  261 (292)
T COG0697         192 --LALLLLLLFFLSGFG--------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVL  261 (292)
T ss_pred             --HHHHHHHHHHhcccc--------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence              112221111111111        11134456677777777775 5577889999999999999999999999999999


Q ss_pred             eeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          250 VLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       250 ~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      ++|| +++..+++|..+++.|+......
T Consensus       262 ~~~e-~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         262 LLGE-PLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HhCC-CCcHHHHHHHHHHHHHHHHHhcc
Confidence            9985 99999999999999999888765

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.84  E-value=5.3e-19  Score=142.47  Aligned_cols=239  Identities=15%  Similarity=0.110  Sum_probs=193.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHH
Q 022507           17 SMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGF   96 (296)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~   96 (296)
                      |...+..|..++++++....+-.+   +++++++++..+.-|+.....+.++|.+++.+|.+.+..+..+-|+.+++++.
T Consensus        40 ~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s  116 (292)
T COG5006          40 AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS  116 (292)
T ss_pred             hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc
Confidence            455999999999988877654222   35566777899999999999999999999999999999999999999988762


Q ss_pred             HhcCccCCccchhhhhhhhhhhHhhhc---CCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHH
Q 022507           97 FSGKGKPTTQVTLSVLLTATGCVIAAL---GDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSL  173 (296)
Q Consensus        97 ~~~~e~~~~~~~~~i~l~~~Gv~l~~~---~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~  173 (296)
                          |  +.++...+.+.+.|..+..-   +..+.|..|..+++.+..||+.|.+..||..+.  .+..+-+...+..++
T Consensus       117 ----R--r~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g~~g~a~gm~vAa  188 (292)
T COG5006         117 ----R--RLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA--EHGTAGVAVGMLVAA  188 (292)
T ss_pred             ----c--chhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCCchHHHHHHHHHH
Confidence                2  34566677888889887643   335678999999999999999999999998753  256666667777888


Q ss_pred             HHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH-HHHHHhccChhHHHHHhhhhHHHHHHhhheeeC
Q 022507          174 PFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFT-MFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLG  252 (296)
Q Consensus       174 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~  252 (296)
                      ++..|+-.....         +...++.....-+..++++..+.|+ -..++++.++.+++++..+||.++.+.|++++|
T Consensus       189 viv~Pig~~~ag---------~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~  259 (292)
T COG5006         189 LIVLPIGAAQAG---------PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLG  259 (292)
T ss_pred             HHHhhhhhhhcc---------hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhc
Confidence            888887664322         2223556666778888888888865 446789999999999999999999999999998


Q ss_pred             CcccchhhHHHHHHHHHHhHHHHH
Q 022507          253 GVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       253 e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      | ++|+.||.|++.++.++.-...
T Consensus       260 e-~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         260 E-TLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             C-CCCHHHHHHHHHHHHHHhcccc
Confidence            5 9999999999999999775544

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.83  E-value=2.5e-22  Score=162.61  Aligned_cols=253  Identities=15%  Similarity=0.135  Sum_probs=198.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHH
Q 022507           17 SMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGF   96 (296)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~   96 (296)
                      |..+.-.|+++-.+...++....+... -.+....+.++..|+.........++|++|+|.+.+.++..++|+++.++++
T Consensus        64 p~e~a~~r~l~~mlit~pcliy~~~~v-~gp~g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw  142 (346)
T KOG4510|consen   64 PMELASFRLLVRMLITYPCLIYYMQPV-IGPEGKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAW  142 (346)
T ss_pred             hhHhhhhhhhhehhhhheEEEEEeeee-ecCCCcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHH
Confidence            666666665444444444322111111 0111122567788999999999999999999999999999999999999999


Q ss_pred             HhcCccCCccchhhhhhhhhhhHhhhcCC--------------cccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHH
Q 022507           97 FSGKGKPTTQVTLSVLLTATGCVIAALGD--------------FSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSV  162 (296)
Q Consensus        97 ~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~--------------~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~  162 (296)
                      .++|||.++.+.++....+.|++++..+.              .+.+.+|.+.++.++++-|--.+..|++.|+.  +..
T Consensus       143 ~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~--h~~  220 (346)
T KOG4510|consen  143 AFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA--HAI  220 (346)
T ss_pred             HHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc--cEE
Confidence            99999999999999999999999975421              12346889999999999999999999987764  666


Q ss_pred             HHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHH
Q 022507          163 EIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVG  242 (296)
Q Consensus       163 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~  242 (296)
                      ....|..+.+.+..++.....|+.        ..++....|+++...|+.+++.+.+....+++--|...++..+.+-++
T Consensus       221 msvsyf~~i~lV~s~I~~~~ig~~--------~lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvf  292 (346)
T KOG4510|consen  221 MSVSYFSLITLVVSLIGCASIGAV--------QLPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVF  292 (346)
T ss_pred             EEehHHHHHHHHHHHHHHhhccce--------ecCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHH
Confidence            667777777777777766655542        222344567788899999999999999898888888889999999999


Q ss_pred             HHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhh
Q 022507          243 STTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQ  281 (296)
Q Consensus       243 ~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~  281 (296)
                      +.++.+++||| .+|++.|+|+++++.+.++....|..+
T Consensus       293 Af~wqv~ff~~-~Pt~ws~~Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  293 AFFWQVLFFGH-WPTIWSWVGAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             HHHHHHHHhcC-CChHHHhhceeeeehhHHHHHHHHHhc
Confidence            99999999996 999999999999999998887766544

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.80  E-value=1.5e-19  Score=147.28  Aligned_cols=256  Identities=20%  Similarity=0.208  Sum_probs=200.9

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcc-cchhHHHHHHhhHHHHHHHHHHHh
Q 022507           20 LLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKG-VNIPMYIAIKRLTPLAVLVAGFFS   98 (296)
Q Consensus        20 l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~-~~~s~~~~l~~~~pv~~~l~~~~~   98 (296)
                      +++.|+++-++-.+++...-...+++.|.   +.+...-..+...+.++|+++++ +|.....++++..++.++++++++
T Consensus        36 ITFaqFlFia~eGlif~skf~~~k~kipl---k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il  112 (330)
T KOG1583|consen   36 ITFAQFLFIATEGLIFTSKFFTVKPKIPL---KDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWIL  112 (330)
T ss_pred             hHHHHHHHHHHhceeeeccccccCCCCch---hhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHh
Confidence            88899988877766654321112255665   55666566677788899999986 899999999999999999999999


Q ss_pred             cCccCCccchhhhhhhhhhhHhhhc---CCcc--------------cc--hhHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 022507           99 GKGKPTTQVTLSVLLTATGCVIAAL---GDFS--------------FD--LSGYSMALTSVFFQTMYLVLVEKSGAEDGL  159 (296)
Q Consensus        99 ~~e~~~~~~~~~i~l~~~Gv~l~~~---~~~~--------------~~--~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~  159 (296)
                      .|+|++.+|+.++....+|+++.+.   .|..              ..  ..|+.+...+.+..|.-.++++...++||-
T Consensus       113 ~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGK  192 (330)
T KOG1583|consen  113 LGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGK  192 (330)
T ss_pred             ccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999998653   1110              01  358888889999999999999999999999


Q ss_pred             CHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcc---------cCchhHHHHHHHHHHHHHHHHHHHHHHHhccChh
Q 022507          160 SSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSK---------SNSFSFLVILILSLVMGIILNFTMFLCTIVNSAL  230 (296)
Q Consensus       160 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~  230 (296)
                      ++-+.++|+..++.|..+..   .+|..+.++.....         ..-+..|+.++.+++..+.+--..+.+..++++.
T Consensus       193 h~~EalFytH~LsLP~Flf~---~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sL  269 (330)
T KOG1583|consen  193 HWKEALFYTHFLSLPLFLFM---GDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSL  269 (330)
T ss_pred             ChHHHHHHHHHhccchHHHh---cchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecce
Confidence            99999999998777765532   22222222111110         1134567888888888888777677788999999


Q ss_pred             HHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhhh
Q 022507          231 TTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQK  282 (296)
Q Consensus       231 ~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~~  282 (296)
                      ++++.-++++.++.++|.+.|+ +++|+.+|+|..++..|..+|+....+++
T Consensus       270 TVTlvltlRKFvSLl~SiiyF~-Npft~~h~lGa~lVF~Gt~~fa~~~~~~~  320 (330)
T KOG1583|consen  270 TVTLVLTLRKFVSLLFSIIYFE-NPFTPWHWLGAALVFFGTLLFANVWNHPK  320 (330)
T ss_pred             EEEEeeeHHHHHHHhheeeEec-CCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence            9999999999999999999996 59999999999999999999987665443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.79  E-value=1.9e-16  Score=131.07  Aligned_cols=254  Identities=13%  Similarity=0.059  Sum_probs=193.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHhc-CC-cccc--ccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHH
Q 022507           17 SMTLLTLQQLATALLIQAGRQM-GY-TKSK--AIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVL   92 (296)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~~~~-~~-~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~   92 (296)
                      +..+...|.+-+.......... |+ .+.+  ..+++.+......+++...+...+.+|.++-.+-++++=.+..|++..
T Consensus        34 ~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~V  113 (293)
T COG2962          34 ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNV  113 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHH
Confidence            4458889988877665554432 21 1111  122334445556677788999999999999888889999999999999


Q ss_pred             HHHHHhcCccCCccchhhhhhhhhhhHhhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhH
Q 022507           93 VAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLS  172 (296)
Q Consensus        93 l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~  172 (296)
                      +++.+++|||+++.||.++.++.+||..-.....+.++..+    .=+++|+.|...-|+. +   .|+.+-...-.+.-
T Consensus       114 llG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval----~la~sf~~Ygl~RK~~-~---v~a~~g~~lE~l~l  185 (293)
T COG2962         114 LLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVAL----ALALSFGLYGLLRKKL-K---VDALTGLTLETLLL  185 (293)
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHH----HHHHHHHHHHHHHHhc-C---CchHHhHHHHHHHH
Confidence            99999999999999999999999999998777777775544    4567899999764443 2   47777666666655


Q ss_pred             HHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeC
Q 022507          173 LPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLG  252 (296)
Q Consensus       173 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~  252 (296)
                      .|..+.+....++..+.     ...++...+.++...|..+..--.+...+-|+.+-++.++++|.+|....+++++++|
T Consensus       186 ~p~al~yl~~l~~~~~~-----~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~  260 (293)
T COG2962         186 LPVALIYLLFLADSGQF-----LQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFG  260 (293)
T ss_pred             hHHHHHHHHHHhcCchh-----hhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            66666555555554431     1112445677788888887766666667889999999999999999999999999998


Q ss_pred             CcccchhhHHHHHHHHHHhHHHHHHHHhhhhc
Q 022507          253 GVQVRALNVTGLLINTAGGVWYSYAKYQQKKK  284 (296)
Q Consensus       253 e~~~t~~~~~G~~lil~g~~~~~~~~~~~~~~  284 (296)
                      | +++..+....+++..|..+|..+..+++|+
T Consensus       261 E-~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~  291 (293)
T COG2962         261 E-PFDSDQLVTFAFIWLALALFSIDGLYTARK  291 (293)
T ss_pred             C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            5 999999999999999999999877655444

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.79  E-value=1.5e-17  Score=139.24  Aligned_cols=214  Identities=14%  Similarity=0.155  Sum_probs=169.3

Q ss_pred             ChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCc
Q 022507           47 DLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDF  126 (296)
Q Consensus        47 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~  126 (296)
                      ++++..++...+++|...+.+.+.++++++++.++++.++..+++++++++++|||.+++||.++.+.++|+++...++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            35566778888999999999999999999999999999999999999999999999999999999999999998643111


Q ss_pred             -----------------ccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhh
Q 022507          127 -----------------SFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGS  189 (296)
Q Consensus       127 -----------------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  189 (296)
                                       +....|.+..+.++++.++..++.+|+.|+.+.+.+.....-...+.++.++..... |..+.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~-~~~~~  171 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLS-DGSAI  171 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcc-ccccc
Confidence                             112589999999999999999999999998877777777666777777776665443 22222


Q ss_pred             hhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHH
Q 022507          190 LSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLI  266 (296)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~l  266 (296)
                      .+..+-+.++...|..+....+.|...    -..+|+.+...=+....+..+++.+.++.+|| .++|....+|..+
T Consensus       172 ~~~g~f~G~~~~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~lf~-~~~s~~f~lg~~~  243 (244)
T PF04142_consen  172 SESGFFHGYSWWVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLLFG-FPPSLSFLLGAAL  243 (244)
T ss_pred             ccCCchhhcchHHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhC-CCCchHHhhheec
Confidence            221122333445555555555544443    34579999999999999999999999999998 5999999999765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.77  E-value=3.4e-18  Score=145.16  Aligned_cols=227  Identities=18%  Similarity=0.192  Sum_probs=183.5

Q ss_pred             hhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCc--
Q 022507           49 MTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDF--  126 (296)
Q Consensus        49 ~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~--  126 (296)
                      +..+..+..+.+....++.+|.|+.+++++..+++.+++-+|+..++.++.+||.+..|.+++.+.+.|+++++.++.  
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            445566677777889999999999999999999999999999999999999999999999999999999999887532  


Q ss_pred             ----c--cchhHHHHHHHHHHHHHHHHHHHHHhccCC--CCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccC
Q 022507          127 ----S--FDLSGYSMALTSVFFQTMYLVLVEKSGAED--GLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSN  198 (296)
Q Consensus       127 ----~--~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  198 (296)
                          .  ....|.++++++++.||.|.++.||...++  +.|--....|..++..+++.|...+.... ....  ++.+.
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~--F~lP~  313 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEER--FELPS  313 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCc--ccCCC
Confidence                1  237899999999999999999999987766  46666666688888888888766654221 1111  12222


Q ss_pred             chhHHHHHHHHHHHHHHHH-HHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          199 SFSFLVILILSLVMGIILN-FTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       199 ~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      ... ...+++.+..+.... +++..+.--++|..+++-..+..+++++.+.++=| .++++.+++|.+.+++|.+..+..
T Consensus       314 ~~q-~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~-~~~S~~~iiGsi~Ifv~Fv~vn~~  391 (416)
T KOG2765|consen  314 STQ-FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKG-KHPSALYIIGSIPIFVGFVIVNIS  391 (416)
T ss_pred             Cce-eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcC-CCCCHHHHHHHHHHHHHHhheecc
Confidence            222 234455566666666 99999999999999999999999999999988766 699999999999999999998876


Q ss_pred             HHh
Q 022507          278 KYQ  280 (296)
Q Consensus       278 ~~~  280 (296)
                      .+.
T Consensus       392 ~~~  394 (416)
T KOG2765|consen  392 SEN  394 (416)
T ss_pred             ccc
Confidence            543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.77  E-value=2.5e-16  Score=133.99  Aligned_cols=227  Identities=14%  Similarity=0.122  Sum_probs=182.0

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCC--
Q 022507           48 LMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGD--  125 (296)
Q Consensus        48 ~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~--  125 (296)
                      +++..++...+++|+..+.+.+.++.+.+++++++..++..+.++++..++++||.++.||.++++.+.|+.+.-.+.  
T Consensus        89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            445566777789999999999999999999999999999999999999999999999999999999999999976211  


Q ss_pred             ---------cccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcc
Q 022507          126 ---------FSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSK  196 (296)
Q Consensus       126 ---------~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  196 (296)
                               .+..+.|....+.++++.++..++.+|++|+.+.+.|........++.++.+......+.....++. +-+
T Consensus       169 ~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~g-ff~  247 (345)
T KOG2234|consen  169 PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYG-FFY  247 (345)
T ss_pred             CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCC-ccc
Confidence                     1223689999999999999999999999988777777777776777777766655544221111222 234


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          197 SNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       197 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      .++...|..++..++.|.....    .+|+.+...=.....+..+++.+.++.+|| .++|....+|..+++.++.+|+.
T Consensus       248 G~s~~vw~vVl~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~-~~~t~~F~lG~~lVi~Si~lY~~  322 (345)
T KOG2234|consen  248 GYSSIVWLVVLLNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFD-FQLTLYFLLGALLVILSIFLYSL  322 (345)
T ss_pred             cccHHHHHHHHHHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHcc-CCchHHHHHHHHHHHHHHHHhhc
Confidence            4566778777777777766654    357777777777777888999999998887 59999999999999999999995


Q ss_pred             HHHh
Q 022507          277 AKYQ  280 (296)
Q Consensus       277 ~~~~  280 (296)
                      .+.+
T Consensus       323 ~P~~  326 (345)
T KOG2234|consen  323 YPAR  326 (345)
T ss_pred             CCcc
Confidence            5443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.76  E-value=1.7e-16  Score=137.13  Aligned_cols=234  Identities=14%  Similarity=0.127  Sum_probs=171.0

Q ss_pred             HHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHh-hHHHHHHHHHHHhcCcc
Q 022507           24 QQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKR-LTPLAVLVAGFFSGKGK  102 (296)
Q Consensus        24 r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~-~~pv~~~l~~~~~~~e~  102 (296)
                      |..++.+++.......+ +++...++.+..-+..|.+.+..+.+++.|.++++++.+..+.+ +.|++..+.+.+++|||
T Consensus        33 ~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~  111 (290)
T TIGR00776        33 GTTFGALILSIAIAIFV-LPEFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEW  111 (290)
T ss_pred             HHHHHHHHHHHHHHHHh-CCcccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhc
Confidence            66666665555433211 11111233333344555567888899999999999999988888 88899999999999999


Q ss_pred             CCccc----hhhhhhhhhhhHhhhcCCcc-------cc-hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhh
Q 022507          103 PTTQV----TLSVLLTATGCVIAALGDFS-------FD-LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSF  170 (296)
Q Consensus       103 ~~~~~----~~~i~l~~~Gv~l~~~~~~~-------~~-~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~  170 (296)
                      .++++    +.++++.++|+++....+.+       .+ ..|+.++++|+++|+.|.+..|+.  +  .|+.+..+.+..
T Consensus       112 ~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~--~~~~~~~~~~~~  187 (290)
T TIGR00776       112 STSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--G--VDGLSVLLPQAI  187 (290)
T ss_pred             cchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHc--C--CCcceehhHHHH
Confidence            99999    99999999999987542211       33 689999999999999999999976  2  378877554443


Q ss_pred             ----hHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHh-ccChhHHHHHhhhhHHHHHH
Q 022507          171 ----LSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTI-VNSALTTTIVGVLKGVGSTT  245 (296)
Q Consensus       171 ----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~sa~~~s~~~~l~pi~~~~  245 (296)
                          .+.+...+.  .  +..       +. .+.. .+..+..|++....+.+++...+ +.++.+.+++.+.+|+.+.+
T Consensus       188 g~~~~~~~~~~~~--~--~~~-------~~-~~~~-~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~  254 (290)
T TIGR00776       188 GMVIGGIIFNLGH--I--LAK-------PL-KKYA-ILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTL  254 (290)
T ss_pred             HHHHHHHHHHHHH--h--ccc-------ch-HHHH-HHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHH
Confidence                233333322  0  000       11 1122 33344488886555566667778 99999999999999999999


Q ss_pred             hhheeeCCcccchhhH----HHHHHHHHHhHHHHH
Q 022507          246 LGFVVLGGVQVRALNV----TGLLINTAGGVWYSY  276 (296)
Q Consensus       246 ~~~~~~~e~~~t~~~~----~G~~lil~g~~~~~~  276 (296)
                      ++++++|| +.++.|+    +|.++++.|+.+...
T Consensus       255 ~~v~~l~E-~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       255 GGILILGE-KKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHhcc-CCCcceeehhHHHHHHHHHHHHHHhc
Confidence            99999995 9999999    999999999987654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.75  E-value=1.5e-17  Score=135.30  Aligned_cols=257  Identities=18%  Similarity=0.189  Sum_probs=213.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHH
Q 022507           16 HSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAG   95 (296)
Q Consensus        16 ~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~   95 (296)
                      +-..+++.|+++-..+.+.-...-..+++..|+   +.....+++..+.+.+.+-++.|+|...-.+.+.+..+-+++.+
T Consensus        74 ~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~---rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmigg  150 (367)
T KOG1582|consen   74 FGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPW---RTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGG  150 (367)
T ss_pred             cchHHHHHHHHHHHhhhheEEEeecccceecch---hHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhhee
Confidence            445689999988766655544332334455666   67888888999999999999999999999999999999999999


Q ss_pred             HHhcCccCCccchhhhhhhhhhhHhhhcCCc----ccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhh
Q 022507           96 FFSGKGKPTTQVTLSVLLTATGCVIAALGDF----SFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFL  171 (296)
Q Consensus        96 ~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~----~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~  171 (296)
                      .++-++|+++.++.+..+..+|.+..+..|.    ++|..|..+.-.+.++.|+-...+++.++.++.++.++.+|....
T Consensus       151 ifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~i  230 (367)
T KOG1582|consen  151 IFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGI  230 (367)
T ss_pred             eeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecc
Confidence            9999999999999999999999999877553    467899999999999999999999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheee
Q 022507          172 SLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVL  251 (296)
Q Consensus       172 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~  251 (296)
                      +.+.++......||..+.+..-..+  +....-..++-...++....+....++..+|.++..+.+.++.+++++|+++|
T Consensus       231 G~vflf~~mvlTge~f~a~~fcaeh--p~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllF  308 (367)
T KOG1582|consen  231 GFVFLFAPMVLTGELFSAWTFCAEH--PVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLF  308 (367)
T ss_pred             cHHHHHHHHHhcccchhhhHHHHhC--cHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHH
Confidence            9999999899999987776543233  23223333444455555566666778999999999999999999999999999


Q ss_pred             CCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          252 GGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       252 ~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      . +++|....-|..+++.|+++..+.|
T Consensus       309 s-KPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  309 S-KPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             c-CchHHHHhhhhHHHHHHHHhhcccC
Confidence            7 6999999999999999999877766

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.73  E-value=1.5e-16  Score=124.80  Aligned_cols=144  Identities=26%  Similarity=0.463  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccC-----CCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhh--hhc-cc-CchhH
Q 022507          132 GYSMALTSVFFQTMYLVLVEKSGAE-----DGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSL--LFS-KS-NSFSF  202 (296)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~-~~-~~~~~  202 (296)
                      |.++++.|.++.|+++++.|+..++     .+.++.++..|+++.+++.+.|.+...|+.......  ... .. .+...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999998887     579999999999999999999999887653311111  011 11 14567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          203 LVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       203 ~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      +..++.+|+.++..+++.+.+++++||.+.++.+.+|.+...+.|+++||| ++|..++.|+++.+.|+.+|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~-~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGE-PITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCC-cCCHHHHHHHHHHHHHHheeeC
Confidence            888899999999999999999999999999999999999999999999996 9999999999999999999874

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.73  E-value=3.2e-16  Score=128.19  Aligned_cols=223  Identities=18%  Similarity=0.150  Sum_probs=173.9

Q ss_pred             hHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCC------
Q 022507           52 KKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGD------  125 (296)
Q Consensus        52 ~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~------  125 (296)
                      ...++.+++-.....+.+.++.+++++.+|+++....+|+.+++.-++|++++.++|+++....+|++++...|      
T Consensus        87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~  166 (372)
T KOG3912|consen   87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD  166 (372)
T ss_pred             ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence            45677899988999999999999999999999999999999999999999999999999999999999865432      


Q ss_pred             ----cccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHh-----CCchhh-------
Q 022507          126 ----FSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVT-----GEFPGS-------  189 (296)
Q Consensus       126 ----~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~-------  189 (296)
                          .+.-..|+.+.+++-+.-|.+.++.+|..++++.+|.+...|..+++.+++.......     ++..+-       
T Consensus       167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~e  246 (372)
T KOG3912|consen  167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLE  246 (372)
T ss_pred             CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchh
Confidence                1223689999999999999999999999999999999999999999866554443322     211110       


Q ss_pred             --hhhhhcccCchhHHHHHHHHHHHHHH--HHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHH
Q 022507          190 --LSLLFSKSNSFSFLVILILSLVMGII--LNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLL  265 (296)
Q Consensus       190 --~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~  265 (296)
                        .+.+......+.  ..+...|.....  .++......|..|+++-.++..++..+.-+++.....| .+...|+.|.+
T Consensus       247 D~~~~~~~~~e~p~--l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E-~f~llqilGFl  323 (372)
T KOG3912|consen  247 DWGDAFAALQESPS--LAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWE-YFHLLQILGFL  323 (372)
T ss_pred             hHHHHHHHhcCCch--hHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHH-HHHHHHHHHHH
Confidence              000000011111  122233332222  23555567799999999999999999999999988875 99999999999


Q ss_pred             HHHHHhHHHHHH
Q 022507          266 INTAGGVWYSYA  277 (296)
Q Consensus       266 lil~g~~~~~~~  277 (296)
                      +.+.|..+|+..
T Consensus       324 iLi~Gi~lY~~i  335 (372)
T KOG3912|consen  324 ILIMGIILYNQI  335 (372)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999853

>TIGR00803 nst UDP-galactose transporter

Probab=99.37  E-value=2.9e-12  Score=106.70  Aligned_cols=194  Identities=13%  Similarity=0.104  Sum_probs=131.6

Q ss_pred             cchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcC--------------------Cc-------c
Q 022507           75 VNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALG--------------------DF-------S  127 (296)
Q Consensus        75 ~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~--------------------~~-------~  127 (296)
                      ++++.....++..|+++++.++...+||++..|+++.++...|+.....+                    +.       +
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            46677888999999999999999999999999999999999998752211                    10       1


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHH
Q 022507          128 FDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILI  207 (296)
Q Consensus       128 ~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (296)
                      ..+.|....+.+.++.++..++.++..|+++.+.+.......+.+.+......... +.....+..+-+.++...|..+ 
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-  159 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWS-DGTLISNFGFFIGYPTAVWIVG-  159 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhc-ccchhhccCcccCCchHHHHHH-
Confidence            23567777888888999999999998766533322222222222333222111111 1110001000112233333333 


Q ss_pred             HHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHH
Q 022507          208 LSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWY  274 (296)
Q Consensus       208 ~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~  274 (296)
                         ......+.+....+|+.++.+.++...++++++.++++++||| +++..++.|..+++.|+.+|
T Consensus       160 ---~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~-~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       160 ---LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDA-KISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             ---HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CccHHHHHHHHHHHeeeEeC
Confidence               2233344556678999999999999999999999999999985 99999999999999997765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.36  E-value=6.4e-14  Score=113.38  Aligned_cols=257  Identities=14%  Similarity=0.075  Sum_probs=181.1

Q ss_pred             eeeHHHHhc-CCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHH
Q 022507            5 FINKAVIMQ-YAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAI   83 (296)
Q Consensus         5 ~~nK~~l~~-~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l   83 (296)
                      +.|.++-+. .+.|..=++.-...-+++--++...|+   +.+. ..+++.+..++.-.-.+++-..|.||++.....++
T Consensus        35 ~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~~-~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lL  110 (336)
T KOG2766|consen   35 FTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---KYIK-AKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLL  110 (336)
T ss_pred             hhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---HHHH-HHHHHhhheeEEeecccEEEeeehhhcchHHHHHH
Confidence            445555554 355655444444443333333333332   2221 22255777777777778888889999999999999


Q ss_pred             HhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCc--------ccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 022507           84 KRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDF--------SFDLSGYSMALTSVFFQTMYLVLVEKSGA  155 (296)
Q Consensus        84 ~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~  155 (296)
                      -.-..+.+.+++|+++|.|+++.++.+++.++.|++++..+|.        +....|+++++.++-+||..++..+.+.|
T Consensus       111 Dcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk  190 (336)
T KOG2766|consen  111 DCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK  190 (336)
T ss_pred             HHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh
Confidence            9999999999999999999999999999999999999766442        22357999999999999999999999988


Q ss_pred             CCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHH
Q 022507          156 EDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIV  235 (296)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~  235 (296)
                      +.  |..+.+....++++++..+-....  ..+.    ...+++...... +.....-++.+...-..+|..|++.+.+.
T Consensus       191 n~--d~~elm~~lgLfGaIIsaIQ~i~~--~~~~----~tl~w~~~i~~y-l~f~L~MFllYsl~pil~k~~~aT~~nls  261 (336)
T KOG2766|consen  191 NA--DRVELMGFLGLFGAIISAIQFIFE--RHHV----STLHWDSAIFLY-LRFALTMFLLYSLAPILIKTNSATMFNLS  261 (336)
T ss_pred             cC--cHHHHHHHHHHHHHHHHHHHHhhh--ccce----eeEeehHHHHHH-HHHHHHHHHHHHhhHHheecCCceEEEhh
Confidence            74  899999999999998888763332  1111    122223221111 11222222333333355688888888777


Q ss_pred             hhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          236 GVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       236 ~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      -......++++  ..||- +.+|...+..+.+..|.+.|+.+
T Consensus       262 lLTsDmwsl~i--~~FgY-hv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  262 LLTSDMWSLLI--RTFGY-HVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             HhHHHHHHHHH--HHHhc-chhhhhHHHHHHHHHhhEEeecc
Confidence            77778888877  55775 89999999999999999999654

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.28  E-value=3e-11  Score=87.78  Aligned_cols=134  Identities=18%  Similarity=0.190  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHH
Q 022507          133 YSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVM  212 (296)
Q Consensus       133 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (296)
                      .++++++++++++..++.|--.++  .||...+...++....++.......|....      ...-+...|..+.++|+.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At~IRtiVi~~~l~~v~~~~g~~~~------~~~~~~k~~lflilSGla   76 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEG--VDPDFATTIRTIVILIFLLIVLLVTGNWQA------GGEIGPKSWLFLILSGLA   76 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccc--cCccHHHHHHHHHHHHHHHHHHHhcCceec------ccccCcceehhhhHHHHH
Confidence            588999999999999999887765  488888888887777777777777665322      111245668888899988


Q ss_pred             HHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHH
Q 022507          213 GIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYS  275 (296)
Q Consensus       213 ~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~  275 (296)
                      +-....++|++++...++.+..+.-+.|++++++|++++|| ++|..+++|.+++..|.++.+
T Consensus        77 ~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E-~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          77 GGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGE-RLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhCeeeEe
Confidence            87777999999999999999999999999999999999995 999999999999999987754

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.28  E-value=2.1e-11  Score=91.73  Aligned_cols=117  Identities=14%  Similarity=0.205  Sum_probs=96.7

Q ss_pred             eeeeHHHHhcCCCchHHHHHHHHHHHHHHHHHHh-cCCccccccChhhhhHHHHHHHH-HHHHHHHHhhhhcccchhHHH
Q 022507            4 VFINKAVIMQYAHSMTLLTLQQLATALLIQAGRQ-MGYTKSKAIDLMTAKKLLPVSLF-YNANVAFALASLKGVNIPMYI   81 (296)
Q Consensus         4 ~~~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~~~s~~~   81 (296)
                      .+++|...++.+ |....++|...+.+ ...... .++.+.++.+++++...+..+++ ......+.++++++.+++.++
T Consensus         7 ~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~   84 (126)
T PF00892_consen    7 SVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVS   84 (126)
T ss_pred             HHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHH
Confidence            456788888754 77899999999986 444333 22222356666676777777777 589999999999999999999


Q ss_pred             HHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhh
Q 022507           82 AIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAA  122 (296)
Q Consensus        82 ~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~  122 (296)
                      .+.++.|+++.+++++++||++++.++.++++++.|++++.
T Consensus        85 ~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   85 ILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.24  E-value=5e-11  Score=88.33  Aligned_cols=106  Identities=16%  Similarity=0.123  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCcc---ccccChhhhhHHHHHHHHHH-HHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHH
Q 022507           22 TLQQLATALLIQAGRQMGYTK---SKAIDLMTAKKLLPVSLFYN-ANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFF   97 (296)
Q Consensus        22 ~~r~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~-~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~   97 (296)
                      .+|...+.+.+......++..   .++.+++.+..+...|++.. .+..++++|+++.| +.+..+.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            468888887777765543211   12223344455566677665 88999999999999 58899999999999999999


Q ss_pred             hcCccCCccchhhhhhhhhhhHhhhcCCccc
Q 022507           98 SGKGKPTTQVTLSVLLTATGCVIAALGDFSF  128 (296)
Q Consensus        98 ~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~  128 (296)
                      ++|||++++++.+++++++|++++..+|.+.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence            9999999999999999999999998877653

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.17  E-value=2.7e-10  Score=85.66  Aligned_cols=124  Identities=23%  Similarity=0.319  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHH-HHHHHH
Q 022507          141 FFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMG-IILNFT  219 (296)
Q Consensus       141 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~  219 (296)
                      ++||.+.++.|+..++  .|+....+++...+.+ +++.....+...       ....+...+......++.+ ...+.+
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP-------FKNLSPRQWLWLLFLGLLGTALAYLL   70 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc-------ccCCChhhhhhhhHhhccceehHHHH
Confidence            4688999999999877  5999999999999887 665555543321       0111233344555566664 555577


Q ss_pred             HHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHH
Q 022507          220 MFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYS  275 (296)
Q Consensus       220 ~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~  275 (296)
                      .+.+.++.++..++....++|+++.+++++++|| +++..+++|.++++.|+.+..
T Consensus        71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e-~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGE-RPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999985 999999999999999988754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.01  E-value=2e-07  Score=78.27  Aligned_cols=209  Identities=16%  Similarity=0.096  Sum_probs=152.2

Q ss_pred             hhhhHHHHHHHHHHHHHHHHhhhhcccchhHHH-HHHhhHHHHHHHHHHHhcCccCCccchh----hhhhhhhhhHhhhc
Q 022507           49 MTAKKLLPVSLFYNANVAFALASLKGVNIPMYI-AIKRLTPLAVLVAGFFSGKGKPTTQVTL----SVLLTATGCVIAAL  123 (296)
Q Consensus        49 ~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pv~~~l~~~~~~~e~~~~~~~~----~i~l~~~Gv~l~~~  123 (296)
                      +.+..-+..|++.+..+..++.|.++..+|.+- +-...+.+.+.+.+.++++|..+..++.    ++++.++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            556677778888999999999999887766543 3446788889999999999999887764    88888899988776


Q ss_pred             CCccc--------chhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhc
Q 022507          124 GDFSF--------DLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFS  195 (296)
Q Consensus       124 ~~~~~--------~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  195 (296)
                      .|.+.        ...|+...+++.+.|..|.+..|-.    +.|++...+=|.+--.+....+....++ ...      
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~~~-~~~------  191 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFSKK-PFF------  191 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcccc-ccc------
Confidence            43221        2468999999999999999997653    3588888876654333333333332211 100      


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccch----hhHHHHHHHHHHh
Q 022507          196 KSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRA----LNVTGLLINTAGG  271 (296)
Q Consensus       196 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~----~~~~G~~lil~g~  271 (296)
                         +-. .+.=++.|+.-...+.+++...++.+..+.-.+..+..+.+.+.|.+++|| +=+.    ..++|.++++.|.
T Consensus       192 ---~k~-~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E-~Kt~ke~~~~~~G~~Liv~G~  266 (269)
T PF06800_consen  192 ---EKK-SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKE-KKTKKEMIYTLIGLILIVIGA  266 (269)
T ss_pred             ---ccc-hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEe-cCchhhHHHHHHHHHHHHHhh
Confidence               111 223357777777788888888889998888888999999999999999997 4453    4567888888876


Q ss_pred             HH
Q 022507          272 VW  273 (296)
Q Consensus       272 ~~  273 (296)
                      ++
T Consensus       267 il  268 (269)
T PF06800_consen  267 IL  268 (269)
T ss_pred             hc
Confidence            54

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.00  E-value=4.6e-10  Score=87.87  Aligned_cols=219  Identities=17%  Similarity=0.162  Sum_probs=154.2

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCC--ccc
Q 022507           51 AKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGD--FSF  128 (296)
Q Consensus        51 ~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~--~~~  128 (296)
                      +++..|.+.+..+.++.+..|++.++++.++.+....-.|+.+++++++|+|+..-++++.++.+.|++++...|  ...
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            345667888888999999999999999999999999999999999999999999999999999999999988544  445


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHH----HHH-H-HhC-CchhhhhhhhcccCchh
Q 022507          129 DLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLV----FLI-I-VTG-EFPGSLSLLFSKSNSFS  201 (296)
Q Consensus       129 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~-~-~~~-~~~~~~~~~~~~~~~~~  201 (296)
                      ++.|+.+++.|++..|+|.+..|+...+.+  --+...+.+.+++.=+.    |.. + ..+ |.++..    .    ..
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn--~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsF----A----~~  202 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNAN--FGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSF----A----AA  202 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCc--chhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHH----h----hC
Confidence            789999999999999999999999876643  22223333333332211    111 1 111 112111    1    11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHh
Q 022507          202 FLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQ  280 (296)
Q Consensus       202 ~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~  280 (296)
                      -|..+......+...++.....+..+.|...|+=...........+.++ +|-..+.....|..++..|..+.-..+++
T Consensus       203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~-q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILF-QELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHH-HHHHHHHHHHHHHHHHHHhHHheecccch
Confidence            1333444444444445555555666777766664445555556677654 45678899999999999998887665443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.00  E-value=2.3e-08  Score=86.90  Aligned_cols=142  Identities=14%  Similarity=0.123  Sum_probs=108.0

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHH
Q 022507          126 FSFDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVI  205 (296)
Q Consensus       126 ~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (296)
                      .+....|..++++++++|+...++.|.. .  +.++.+..+++...+.+.+.+.....++.....    ....+...+..
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~   75 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLK----TLIQTPQKIFM   75 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHH----HHHcCHHHHHH
Confidence            3445689999999999999999999765 3  369999999999999887777665443211110    00112232333


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHH
Q 022507          206 LILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYS  275 (296)
Q Consensus       206 ~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~  275 (296)
                      ....+......+.+.+++.++.++..+++..+..|+++.++++++++| +++..+++|.++.+.|+.+..
T Consensus        76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E-~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGE-RFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHHHH
Confidence            333344444455778899999999999999999999999999999985 999999999999999998764

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.91  E-value=4e-08  Score=84.82  Aligned_cols=133  Identities=11%  Similarity=0.108  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHH
Q 022507          133 YSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVM  212 (296)
Q Consensus       133 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (296)
                      +.+.+.+++++|..++..||..+++  ++  ..++....+.+.+.|..........      ....+...+..+...+..
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~   72 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PD--FLWWALLAHSVLLTPYGLWYLAQVG------WSRLPATFWLLLAISAVA   72 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hH--HHHHHHHHHHHHHHHHHHHhcccCC------CCCcchhhHHHHHHHHHH
Confidence            5678999999999999999876652  33  3466666667777776554211000      001122334455666666


Q ss_pred             HHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          213 GIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       213 ~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      ......+.+.+.++.++...+.+.+..|+++.+++++++|| +++..+++|.++++.|+.+...
T Consensus        73 ~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e-~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        73 NMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGE-TLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHhc
Confidence            66667788889999999999999999999999999999985 9999999999999999987653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=98.90  E-value=8.4e-08  Score=81.62  Aligned_cols=140  Identities=14%  Similarity=0.196  Sum_probs=107.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHH
Q 022507          131 SGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSL  210 (296)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (296)
                      .|..++++++++|+...++.|.. .+  .++.++.++..+++++.+.+.....++..+.... .........+..+...|
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~--~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g   77 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KP--LPATDILGHRMIWSFPFMLLSVTLFRQWAALIER-LKRIQKRPLILSLLLCG   77 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-cc--CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHH-HhCcccchHHHHHHHHH
Confidence            47899999999999999999974 33  6999999999999988877765444321110000 01111112344556667


Q ss_pred             HHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHH
Q 022507          211 VMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYS  275 (296)
Q Consensus       211 ~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~  275 (296)
                      +.......+.+.+.+++++.+++++.+..|+++.++++++++| +++..+++|..+.++|+.+..
T Consensus        78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~E-k~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKE-RISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHH
Confidence            6666666888899999999999999999999999999999995 999999999999999988654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.86  E-value=4.7e-09  Score=76.45  Aligned_cols=116  Identities=9%  Similarity=0.065  Sum_probs=94.7

Q ss_pred             eeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhc-CCcc-ccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHH
Q 022507            6 INKAVIMQYAHSMTLLTLQQLATALLIQAGRQM-GYTK-SKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAI   83 (296)
Q Consensus         6 ~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~-~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l   83 (296)
                      ..|.-+++.+ |.+=++.|..+....+...... ++.+ ....+.+.+..+...|+..+.+..+++.|++.-++|...-+
T Consensus        21 F~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPl   99 (140)
T COG2510          21 FAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPL   99 (140)
T ss_pred             HHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEc
Confidence            4566665554 7778889998887777666543 3322 22456666677777788888999999999999999999999


Q ss_pred             HhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhh
Q 022507           84 KRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAA  122 (296)
Q Consensus        84 ~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~  122 (296)
                      -.++|+++++++++++|||++..+|.++++..+|.++++
T Consensus       100 dk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510         100 DKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             ccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999998754

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.69  E-value=6.1e-07  Score=79.72  Aligned_cols=138  Identities=13%  Similarity=0.116  Sum_probs=108.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHH
Q 022507          131 SGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSL  210 (296)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (296)
                      .-+..++..-++|+.+.++.|...+. +.++....++...++.++++|+....+....      ....+...+..+...|
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~------~~~~~~~~~~~l~l~g   85 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSK-GLNIYPFLGYSYLLASLLLLPSLFFTNRSRS------LPPLSVSILSKIGLLG   85 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHC-CCCccHHHHHHHHHHHHHHHHHHHHHHHhcc------cCcchHHHHHHHHHHH
Confidence            34677888899999999999998854 7999999999999999999888765321000      0001233455566677


Q ss_pred             HHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhhee------eCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          211 VMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVV------LGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       211 ~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~------~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      +++...+.+.+...++++|..++++.++.|+++.++++++      ++| +++..+++|.++.+.|+.+...
T Consensus        86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~e-r~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKE-RSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcc-cccHHHHHHHHHHHHHHHHHHH
Confidence            7775455567788999999999999999999999999998      675 9999999999999999887654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.63  E-value=5.7e-07  Score=77.84  Aligned_cols=205  Identities=15%  Similarity=0.133  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhc--CCc--ccch----
Q 022507           59 LFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAAL--GDF--SFDL----  130 (296)
Q Consensus        59 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~--~~~--~~~~----  130 (296)
                      ..+..+......|+.+.|.+..+=+.+...++.++++..++|||++++++.++.++++|..++..  ++.  ..+.    
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~  137 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI  137 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence            34678888899999999999999999999999999999999999999999999999999987542  111  1110    


Q ss_pred             -----hHHH-H-HHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhh---hHHHHH--------HHHHHHhCCchhhhhh
Q 022507          131 -----SGYS-M-ALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSF---LSLPFL--------VFLIIVTGEFPGSLSL  192 (296)
Q Consensus       131 -----~G~~-~-~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~---~~~~~l--------~~~~~~~~~~~~~~~~  192 (296)
                           .+++ + .+...+...+.....+|..++   +.   ..|..+   .+....        ..-....|+       
T Consensus       138 ~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~---~i---~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~-------  204 (300)
T PF05653_consen  138 ALLSQPGFLVYFILVLVLILILIFFIKPRYGRR---NI---LVYISICSLIGSFTVLSAKAISILIKLTFSGD-------  204 (300)
T ss_pred             HHhcCcceehhHHHHHHHHHHHHHhhcchhccc---ce---EEEEEEeccccchhhhHHHHHHHHHHHHhcCc-------
Confidence                 1111 1 111111111222222222111   11   111111   111111        100011111       


Q ss_pred             hhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhh-hHHHHHHhhheeeCCc-ccch----hhHHHHHH
Q 022507          193 LFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVL-KGVGSTTLGFVVLGGV-QVRA----LNVTGLLI  266 (296)
Q Consensus       193 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l-~pi~~~~~~~~~~~e~-~~t~----~~~~G~~l  266 (296)
                        +....+..|.+++...+.....-+..++++++.+++....+.+. -...+++-|.++|+|. +.+.    ....|..+
T Consensus       205 --~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~  282 (300)
T PF05653_consen  205 --NQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLI  282 (300)
T ss_pred             --hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHH
Confidence              11113344555555544444555778899999988665554444 5556677777888752 3444    44567777


Q ss_pred             HHHHhHHHHHHH
Q 022507          267 NTAGGVWYSYAK  278 (296)
Q Consensus       267 il~g~~~~~~~~  278 (296)
                      ++.|+.+.+..|
T Consensus       283 ii~GV~lL~~~~  294 (300)
T PF05653_consen  283 IIIGVFLLSSSK  294 (300)
T ss_pred             HHHhhheeeccC
Confidence            888888776544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.62  E-value=4.4e-07  Score=77.26  Aligned_cols=113  Identities=13%  Similarity=0.023  Sum_probs=87.1

Q ss_pred             eeeHHHHhcCCCc-hHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHH-HHHHHHHHhhhhcccchhHHHH
Q 022507            5 FINKAVIMQYAHS-MTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF-YNANVAFALASLKGVNIPMYIA   82 (296)
Q Consensus         5 ~~nK~~l~~~~~p-~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~~~s~~~~   82 (296)
                      +++|...++.+.+ .....+|+.++.+++.+.......+ ...+.+++...+..+++ ......++++++++.+++.++.
T Consensus       145 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~  223 (260)
T TIGR00950       145 VLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASI  223 (260)
T ss_pred             HHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence            4567666665433 3455578888888777765543222 23345555556666665 4678888999999999999999


Q ss_pred             HHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhh
Q 022507           83 IKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGC  118 (296)
Q Consensus        83 l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv  118 (296)
                      +.++.|++.++++++++||+++..++.++.+.+.|+
T Consensus       224 ~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       224 LALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999986

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.58  E-value=4.1e-07  Score=66.79  Aligned_cols=65  Identities=15%  Similarity=0.058  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhc
Q 022507           59 LFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAAL  123 (296)
Q Consensus        59 ~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~  123 (296)
                      ..+....++...++++.|.+.+..+.++.++++++.+++++|||++.+++.++.+.++|++++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44778899999999999999999999999999999999999999999999999999999988653

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.36  E-value=1.2e-05  Score=60.50  Aligned_cols=119  Identities=12%  Similarity=-0.034  Sum_probs=82.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHH
Q 022507          131 SGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSL  210 (296)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (296)
                      .|+++.+.+.++.+..+++.|+-.++.+..+....   .    .... . ... +              +   ...+..|
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~---~----~~~~-~-~~~-~--------------p---~~~i~lg   54 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD---F----IAAL-L-AFG-L--------------A---LRAVLLG   54 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH---H----HHHH-H-HHh-c--------------c---HHHHHHH
Confidence            47889999999999999999988766432111110   0    0000 0 000 1              0   0123455


Q ss_pred             HHHHHHH-HHHHHHHhccChhHHHHHhhhhHHHHHHhhhe--eeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          211 VMGIILN-FTMFLCTIVNSALTTTIVGVLKGVGSTTLGFV--VLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       211 ~~~~~~~-~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~--~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      +..+... +++..++++.+.+.+.......++...+.++.  +||| ++|+.+++|++++++|+++.++.
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E-~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE-TFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHhccC
Confidence            5555555 55668899999999988888888777777774  7985 99999999999999999997653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.29  E-value=3.5e-05  Score=68.57  Aligned_cols=138  Identities=14%  Similarity=0.071  Sum_probs=102.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhccCCCCC-HHHHHHHHhhhHHHHHHHHHHHh-CCchhhhhhhhcccCchhHHHHH
Q 022507          129 DLSGYSMALTSVFFQTMYLVLVEKSGAEDGLS-SVEIMFYNSFLSLPFLVFLIIVT-GEFPGSLSLLFSKSNSFSFLVIL  206 (296)
Q Consensus       129 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  206 (296)
                      ++.-..+.+.--.+...+++++|...+..  + |+.+...+.+.+.+...+..... .+.++.       ......+..+
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~--~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~l  117 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFALLYWATGFRKIPRI-------KSLKLFLKNF  117 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-------CCHHHHHHHH
Confidence            34444556666667777888999988774  6 99999999998877655443321 111111       0012245566


Q ss_pred             HHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          207 ILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       207 ~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      +..|+++.......+..++.++++.++++....|++++++++++++| +++..++.|.+++++|+.+...
T Consensus       118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~e-k~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQ-FLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCC-CccHHHHHHHHHHHHHHHheec
Confidence            77777777666666688899999999999999999999999999995 9999999999999999887653

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.28  E-value=5.8e-05  Score=65.52  Aligned_cols=130  Identities=10%  Similarity=0.054  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHH
Q 022507          133 YSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVM  212 (296)
Q Consensus       133 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (296)
                      .+..+.-.+.|+...+..|...++  .+|.+..++....+++.+.+.....+....          +...+......|.+
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~--~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~----------~~~~~~~~~~~g~~   77 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVES--WPPLMMAGVRFLIAGILLLAFLLLRGHPLP----------TLRQWLNAALIGLL   77 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHHHHhCCCCC----------cHHHHHHHHHHHHH
Confidence            345667788999999999987654  699999999999998888877654322110          12234444455555


Q ss_pred             HHHH-HHHHHHHH-hccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          213 GIIL-NFTMFLCT-IVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       213 ~~~~-~~~~~~~~-~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      .... +.+.+... ++.++...++..++.|+++.+++++ +|| +++..+++|..+.++|+.+...
T Consensus        78 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e-~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         78 LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGI-RTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcc-cCchhHHHHHHHHHHhHHHHhc
Confidence            4333 34455555 8889999999999999999999986 785 9999999999999999887653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.28  E-value=3.6e-05  Score=67.16  Aligned_cols=130  Identities=14%  Similarity=0.008  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHH
Q 022507          136 ALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGII  215 (296)
Q Consensus       136 ~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  215 (296)
                      .+.--++...+++++|...++. ..|..+.+.+...+.+...+... .+. .+      ....+...+..++..|++...
T Consensus         7 ~~~w~~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~-~~~-~~------~~~~~~~~~~~~~~~g~~~~~   77 (302)
T TIGR00817         7 FGLWYFLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS-SGL-PK------RLKISSALLKLLLPVAIVHTI   77 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH-hCC-CC------CCCCCHHHHHHHHHHHHHHHH
Confidence            3445556666778888888763 47888888888777666554411 111 11      011123456666677777666


Q ss_pred             HHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHH
Q 022507          216 LNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYS  275 (296)
Q Consensus       216 ~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~  275 (296)
                      ...+.+...+++++...+++..+.|+++.++++++++| +++..++.|.+++++|+.+..
T Consensus        78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e-~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQ-EFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHhhhc
Confidence            66778889999999999999999999999999999985 999999999999999987643

specificities overlap.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.24  E-value=1.5e-05  Score=69.22  Aligned_cols=115  Identities=11%  Similarity=0.057  Sum_probs=80.8

Q ss_pred             eeHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHH-HHHHHHHHhhhhcccchhHHHHHH
Q 022507            6 INKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLF-YNANVAFALASLKGVNIPMYIAIK   84 (296)
Q Consensus         6 ~nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~~~s~~~~l~   84 (296)
                      +.|...++.+ |... ....+++.+.+.+...... .....+...+...+..+++ ......++++++++.+++.++.+.
T Consensus       166 ~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~  242 (293)
T PRK10532        166 SGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQA-GEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLM  242 (293)
T ss_pred             HHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHcc-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHH
Confidence            3444444433 4444 3455555555554443321 1112333333334556665 457777889999999999999999


Q ss_pred             hhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhc
Q 022507           85 RLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAAL  123 (296)
Q Consensus        85 ~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~  123 (296)
                      ++.|++..++++++++|+++..++.+..+.+.|.+....
T Consensus       243 ~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        243 SMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999988754

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.24  E-value=2.7e-05  Score=57.47  Aligned_cols=71  Identities=14%  Similarity=0.240  Sum_probs=58.9

Q ss_pred             HHHHHHHHH-HHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          206 LILSLVMGI-ILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       206 ~~~~g~~~~-~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      ++..|..+. ..+...+.+.++.++ .++....+.|+++.++|+++++| +++..++.|.+++.+|+.+....+
T Consensus        37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~e-r~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKE-RLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhhhh
Confidence            444455554 445666788899885 77899999999999999999995 999999999999999999987754

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.21  E-value=4.5e-05  Score=64.07  Aligned_cols=141  Identities=14%  Similarity=0.165  Sum_probs=111.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHH
Q 022507          128 FDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILI  207 (296)
Q Consensus       128 ~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (296)
                      .+..|++.++.+-+.|+.-..+.|-+. +  .++.++..+..+-+.+.+...........+..    +...++..+..+.
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~-~--~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~----~~~~~p~~~~~~~   76 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLLE-P--LPATEILAHRVIWSFPFMLALLFLLRQWRELK----QLLKQPKTLLMLA   76 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHc-c--CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----HHHhCcHHHHHHH
Confidence            345799999999999999999998763 3  48999999999989888887776654433322    2223445566666


Q ss_pred             HHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          208 LSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       208 ~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      .++..-........++.++-....+|.=.+++|++.+++|.++++| +++..|++..++..+|+.....
T Consensus        77 l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkE-rls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          77 LTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKE-RLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHH
Confidence            6666655555656688999999999999999999999999999996 9999999999999999876543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.15  E-value=0.0025  Score=56.01  Aligned_cols=225  Identities=12%  Similarity=0.028  Sum_probs=141.3

Q ss_pred             cChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHH-HhhHHHHHHHHHHHhcCccC---Cc----cchhhhhhhhhh
Q 022507           46 IDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAI-KRLTPLAVLVAGFFSGKGKP---TT----QVTLSVLLTATG  117 (296)
Q Consensus        46 ~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pv~~~l~~~~~~~e~~---~~----~~~~~i~l~~~G  117 (296)
                      .+.+.+..-+..|.+.+..+..+..+.++..+|...-+ ..++.+...++..++++|-.   +.    .-..++++.++|
T Consensus        68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence            45555566777888889999999999999988876644 45778888888888888755   32    245778888888


Q ss_pred             hHhhhc----CCc--------cc-chhHHHHHHHHHHHHHHHH-------HHHHHhccCCCCCHHHHHHHHhh---hHHH
Q 022507          118 CVIAAL----GDF--------SF-DLSGYSMALTSVFFQTMYL-------VLVEKSGAEDGLSSVEIMFYNSF---LSLP  174 (296)
Q Consensus       118 v~l~~~----~~~--------~~-~~~G~~~~l~s~~~~a~~~-------v~~k~~~~~~~~~~~~~~~~~~~---~~~~  174 (296)
                      +++.+.    .|.        ++ ...|+.+++++.+.++.|.       ...+.. .+.+.++.....-+..   .+..
T Consensus       148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~~  226 (345)
T PRK13499        148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGGA  226 (345)
T ss_pred             HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHHH
Confidence            888765    222        12 2579999999999999999       433332 1234566554444433   2222


Q ss_pred             HHH-HHHHH---hCCchhhhhhhhcccCc----hhHHHHHHHHHHHHHHHHHHHHHHHhccChh----HHHHHhhhhHHH
Q 022507          175 FLV-FLIIV---TGEFPGSLSLLFSKSNS----FSFLVILILSLVMGIILNFTMFLCTIVNSAL----TTTIVGVLKGVG  242 (296)
Q Consensus       175 ~l~-~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~----~~s~~~~l~pi~  242 (296)
                      ..- .....   .++..+...   +...+    ........+.|+.-...+.++....++.+..    ...+.+.+.-++
T Consensus       227 ~~n~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Vii  303 (345)
T PRK13499        227 ITNLGFCFIRLAKNKDLSLKA---DFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLC  303 (345)
T ss_pred             HHHHHHHHHHHhhCCCcccch---hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHH
Confidence            221 11111   112111100   11101    2334455677777777777766666666333    223444667788


Q ss_pred             HHHhhheeeCCcccc------hhhHHHHHHHHHHhHHHHH
Q 022507          243 STTLGFVVLGGVQVR------ALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       243 ~~~~~~~~~~e~~~t------~~~~~G~~lil~g~~~~~~  276 (296)
                      +.+.|. ++|| .=+      ...++|.+++++|..+...
T Consensus       304 stlwGi-~lkE-~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        304 GNLWGL-VLKE-WKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             HHHhhh-hhhh-ccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            898998 4886 444      6779999999999887654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.13  E-value=9e-05  Score=64.42  Aligned_cols=130  Identities=16%  Similarity=0.159  Sum_probs=92.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHH
Q 022507          131 SGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSL  210 (296)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (296)
                      .+++.++.++++|+...+..|...++  .+|.....+....+.+++.+..    ..+...    ..  +   +..++..+
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~--~~P~~~~~~R~~~a~l~l~~~~----~~~~~~----~~--~---~~~~~~~~   68 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSES--LGPVGGAAMIYSVSGLLLLLTV----GFPRLR----QF--P---KRYLLAGG   68 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHcc--CChHHHHHHHHHHHHHHHHHHc----cccccc----cc--c---HHHHHHHh
Confidence            45778899999999999999987665  5999999999888888777642    111110    01  1   11122223


Q ss_pred             HHHHHHHHHHHHHH----hccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          211 VMGIILNFTMFLCT----IVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       211 ~~~~~~~~~~~~~~----~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      +.......+.+...    +..++..++++.++.|+++.++++++++| +++..+++|.++.+.|+.+...
T Consensus        69 l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e-~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         69 LLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQ-KANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcC-CccHHHHHHHHHHHHhHhheec
Confidence            22222223333333    45678888999999999999999999985 9999999999999999887653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.06  E-value=0.00013  Score=63.52  Aligned_cols=124  Identities=13%  Similarity=0.086  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHH
Q 022507          134 SMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMG  213 (296)
Q Consensus       134 ~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (296)
                      ...++++++|+...+..|...++  .+|....++...++++.+.+....  +  .       .  +   +......|...
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~--~~p~~~~~~R~~~a~~~l~~~~~~--~--~-------~--~---~~~~~~~g~~~   68 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHN--MPPLMLAGLRFMLVAFPAIFFVAR--P--K-------V--P---LNLLLGYGLTI   68 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHhcC--C--C-------C--c---hHHHHHHHHHH
Confidence            56788999999999999987654  699999999988876655543211  1  0       0  1   11122233333


Q ss_pred             HHHH-HHHHHHHhc-cChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          214 IILN-FTMFLCTIV-NSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       214 ~~~~-~~~~~~~~~-~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      ...+ .+.+...++ .++...+++.+..|+++.++++++++| +++..+++|.++.++|+.+...
T Consensus        69 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e-~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         69 SFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGE-RLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcC-cCcHHHHHHHHHHHHhHHHhcc
Confidence            3333 344556665 577888999999999999999999985 9999999999999999887653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.05  E-value=6.4e-05  Score=65.14  Aligned_cols=132  Identities=18%  Similarity=0.216  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHH
Q 022507          132 GYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLV  211 (296)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  211 (296)
                      |++++++++++|+...+..|+..   +.++.+..  ...++..+.......... +.        .+....+..-++.|.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~-~~--------~~~~~~~~~g~l~G~   67 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVL-PE--------FWALSIFLVGLLSGA   67 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhC-Cc--------ccccHHHHHHHHHHH
Confidence            67899999999999999999874   44555554  234444444443333221 11        112344555567777


Q ss_pred             HHHHHHHHHHHHHhccChhHHHHHhh-hhHHHHHHhhheeeCCcccchhh----HHHHHHHHHHhHHHHHHH
Q 022507          212 MGIILNFTMFLCTIVNSALTTTIVGV-LKGVGSTTLGFVVLGGVQVRALN----VTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       212 ~~~~~~~~~~~~~~~~sa~~~s~~~~-l~pi~~~~~~~~~~~e~~~t~~~----~~G~~lil~g~~~~~~~~  278 (296)
                      .-...+.+++.++++.+....-.+.+ +.++...+++.+++|| +.+..+    ++|.++++.|+.+....+
T Consensus        68 ~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e-~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        68 FWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGE-WSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhh-ccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            77777788999999999888877767 8888999999999995 999999    999999999988875543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.02  E-value=3.4e-05  Score=65.56  Aligned_cols=216  Identities=10%  Similarity=-0.000  Sum_probs=132.6

Q ss_pred             hHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCCccc---
Q 022507           52 KKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGDFSF---  128 (296)
Q Consensus        52 ~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~~~~---  128 (296)
                      +.+....+.+..+-..++.|..+.|++..+-+-+++.+..++++..++|||.+....+++.++++|..++.....+.   
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            34445555688999999999999999999999999999999999999999999999999999999998876422111   


Q ss_pred             -c---------hhHHH-HHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHH-----------HHHHHhCCc
Q 022507          129 -D---------LSGYS-MALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLV-----------FLIIVTGEF  186 (296)
Q Consensus       129 -~---------~~G~~-~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~~~~~~~~  186 (296)
                       +         -++++ ++.+-.....+-..+.|.   +++  ...+..|-.+.+.+-.+           +-..+.|. 
T Consensus       145 ~t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~p---~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~-  218 (335)
T KOG2922|consen  145 ESVEEVWELATEPGFLVYVIIIILIVLILIFFYAP---RYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN-  218 (335)
T ss_pred             ccHHHHHHHhcCccHHHHHHHHHHHHHHHheeecc---ccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC-
Confidence             1         12221 111111111111112221   221  11222333333332110           00011111 


Q ss_pred             hhhhhhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhh-hHHHHHHhhheeeCCc-ccc----hhh
Q 022507          187 PGSLSLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVL-KGVGSTTLGFVVLGGV-QVR----ALN  260 (296)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l-~pi~~~~~~~~~~~e~-~~t----~~~  260 (296)
                              ++...+..|..++....+........+.+++..++..++.+.++ -..+++..|.++|+|- ..+    ...
T Consensus       219 --------~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~  290 (335)
T KOG2922|consen  219 --------NQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGE  290 (335)
T ss_pred             --------cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence                    12223344555555555555555667788999988777766665 5667777888888751 223    345


Q ss_pred             HHHHHHHHHHhHHHHHHHHhh
Q 022507          261 VTGLLINTAGGVWYSYAKYQQ  281 (296)
Q Consensus       261 ~~G~~lil~g~~~~~~~~~~~  281 (296)
                      ..|...++.|+.+....|+.+
T Consensus       291 ~~Gf~ti~~G~flL~~~kd~~  311 (335)
T KOG2922|consen  291 LCGFVTIFLGIFLLHRTKDME  311 (335)
T ss_pred             HHhHHHhhheeeEeeeecccc
Confidence            678888999988887665443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.97  E-value=0.00018  Score=62.75  Aligned_cols=131  Identities=15%  Similarity=0.057  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHhccCCCCC--HHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH
Q 022507          142 FQTMYLVLVEKSGAEDGLS--SVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFT  219 (296)
Q Consensus       142 ~~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  219 (296)
                      ++..+.+.++++.++...+  +..+++.|.....+...+.........       +...+   +.-....++...+...+
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~~~~~~   80 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-------SRKIP---LKKYAILSFLFFLASVL   80 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-------CCcCh---HHHHHHHHHHHHHHHHH
Confidence            3444667888887665445  888888888888777776655543101       01111   22334445666666678


Q ss_pred             HHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhhhh
Q 022507          220 MFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQKK  283 (296)
Q Consensus       220 ~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~~~  283 (296)
                      .+.+.++.+-.+..+....+|+.+++.+++++| ++.+..++.+..++.+|+.+....+.++++
T Consensus        81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~-k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   81 SNAALKYISYPTQIVFKSSKPIPVMILGVLILG-KRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             HHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcC-ccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            888899999999999999999999999999998 599999999999999999999876654433

; GO: 0055085 transmembrane transport

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.97  E-value=5.2e-05  Score=57.10  Aligned_cols=71  Identities=17%  Similarity=0.115  Sum_probs=61.8

Q ss_pred             HHHHH-HHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHH--hcCccCCccchhhhhhhhhhhHhhhcCC
Q 022507           55 LPVSL-FYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFF--SGKGKPTTQVTLSVLLTATGCVIAALGD  125 (296)
Q Consensus        55 l~~~~-~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~--~~~e~~~~~~~~~i~l~~~Gv~l~~~~~  125 (296)
                      +..++ ++.....+++++++..|++.+.-+.+..+..+++.++.  ++||+++..++.++.+.++|+.++..++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            33444 57899999999999999999999999999888888885  8999999999999999999999976543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.87  E-value=0.00034  Score=61.33  Aligned_cols=141  Identities=13%  Similarity=0.059  Sum_probs=95.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCCC-HHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHH
Q 022507          130 LSGYSMALTSVFFQTMYLVLVEKSGAEDGLS-SVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILIL  208 (296)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (296)
                      +.+.++.-.-++|-+...+..+.+.++ +.+ |..-.+.+...-.+...+....-.. .+  + ....  ....|+..++
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~-~~--~-~~~~--~~~~~w~y~l   84 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRG-FK--K-WLKV--LKRPWWKYFL   84 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccc-cc--c-chhh--cchhHHHHHH
Confidence            345666666677777777777766554 333 3333344443333333332222110 00  0 0000  1123445556


Q ss_pred             HHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          209 SLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       209 ~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      .+++=...+++...+.++++.+.++++.....+++.+++++++++ +.++.|++|+.++++|+.+.....
T Consensus        85 la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~-ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   85 LALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKR-RYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHh-hhhHHHHHHHHHHHhhhhheeeec
Confidence            688888889999999999999999999999999999999999995 999999999999999998876654

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.84  E-value=0.00015  Score=53.17  Aligned_cols=63  Identities=14%  Similarity=-0.062  Sum_probs=53.1

Q ss_pred             HHHHHH-HHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHH
Q 022507          212 MGIILN-FTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYS  275 (296)
Q Consensus       212 ~~~~~~-~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~  275 (296)
                      ..+... ++...+.++.+...+...-.+.++.+.+.|+++||| ++|..+++|..+++.|+++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E-~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHE-PVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHh
Confidence            333334 445577899999888888889999999999999985 999999999999999998764

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.84  E-value=0.0011  Score=50.62  Aligned_cols=131  Identities=18%  Similarity=0.221  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHH
Q 022507          133 YSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVM  212 (296)
Q Consensus       133 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (296)
                      .++++.+.++-+.+..++.++.++.+ |++...+.+...+++.+.......++. +.     ....+.+.|  ..+.|++
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~-----~~~~~~p~w--~~lGG~l   73 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SL-----ASLSSVPWW--AYLGGLL   73 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-cc-----chhccCChH--HhccHHH
Confidence            56788899999999999988877653 699999999999999988888877653 22     111122222  2347888


Q ss_pred             HHHHHHHHHHHHhccChhHHHHHhhh-hHHHHHHhhhe-eeCC--cccchhhHHHHHHHHHHhH
Q 022507          213 GIILNFTMFLCTIVNSALTTTIVGVL-KGVGSTTLGFV-VLGG--VQVRALNVTGLLINTAGGV  272 (296)
Q Consensus       213 ~~~~~~~~~~~~~~~sa~~~s~~~~l-~pi~~~~~~~~-~~~e--~~~t~~~~~G~~lil~g~~  272 (296)
                      +...-.+....+++.++..+...... +-+.+.+++.+ +||.  +++++..++|.+++++|+.
T Consensus        74 G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   74 GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            88888888888899999888777666 55556667764 2322  3889999999999999975

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.78  E-value=0.00025  Score=52.49  Aligned_cols=71  Identities=8%  Similarity=0.049  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccchhHHHHHH-hhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhc
Q 022507           53 KLLPVSLFYNANVAFALASLKGVNIPMYIAIK-RLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAAL  123 (296)
Q Consensus        53 ~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~  123 (296)
                      ......++++.+.++...+++++|.+.+-.+- ...-+.+++.+.+++||+++..++.++.+.++|++.+-.
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            34566677889999999999999999988774 688899999999999999999999999999999988754

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.72  E-value=0.0016  Score=55.92  Aligned_cols=140  Identities=16%  Similarity=0.165  Sum_probs=97.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHH
Q 022507          130 LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILS  209 (296)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (296)
                      ..+....+..++.++......|...++ ..+.....++....+.+...+......  ....    +..  ...++..+..
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~--~~~~~~~~~~   76 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEP--RGLR----PAL--RPWLLLLLLA   76 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhc--cccc----ccc--cchHHHHHHH
Confidence            456778888889999999988887655 346666666666666555333222211  0000    111  1123344444


Q ss_pred             HHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhh-eeeCCcccchhhHHHHHHHHHHhHHHHHHHH
Q 022507          210 LVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGF-VVLGGVQVRALNVTGLLINTAGGVWYSYAKY  279 (296)
Q Consensus       210 g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~-~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~  279 (296)
                      +........+.+...++.++...+...+..|+++.++++ ++++| +++..++.|..+.+.|+.+....+.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~Gv~lv~~~~~  146 (292)
T COG0697          77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGE-RLSLLQILGILLALAGVLLILLGGG  146 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHhHHheecCCC
Confidence            555555557777889999999999999999999999997 66685 9999999999999999998876543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.72  E-value=0.00039  Score=50.76  Aligned_cols=70  Identities=11%  Similarity=0.097  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhcccchhHHHHHH-hhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhc
Q 022507           54 LLPVSLFYNANVAFALASLKGVNIPMYIAIK-RLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAAL  123 (296)
Q Consensus        54 ~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~-~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~  123 (296)
                      ....-+++..+.++...+++.+|.+.+-.+- ...-+.+++.+++++||++++.++.++.+.++|++.+-.
T Consensus        33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3445556788888899999999999988874 478889999999999999999999999999999998754

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.68  E-value=0.00052  Score=49.59  Aligned_cols=70  Identities=11%  Similarity=0.084  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccchhHHHHHHh-hHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhh
Q 022507           53 KLLPVSLFYNANVAFALASLKGVNIPMYIAIKR-LTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAA  122 (296)
Q Consensus        53 ~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~-~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~  122 (296)
                      ..+....++..+.++...+++.+|.+.+-.+=. ...+.+++.+++++||++++.++.++.+.+.|++.+-
T Consensus        31 ~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         31 PSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            344556678889999999999999988766555 7888999999999999999999999999999998863

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.66  E-value=0.00055  Score=53.15  Aligned_cols=116  Identities=11%  Similarity=0.071  Sum_probs=83.8

Q ss_pred             eeHHHHhc-----CC-CchHHHHHHHHHHHHHHHHHHh-cCCccc----ccc-------ChhhhhHHHHHHHHHHHHHHH
Q 022507            6 INKAVIMQ-----YA-HSMTLLTLQQLATALLIQAGRQ-MGYTKS----KAI-------DLMTAKKLLPVSLFYNANVAF   67 (296)
Q Consensus         6 ~nK~~l~~-----~~-~p~~l~~~r~~~~~~~l~~~~~-~~~~~~----~~~-------~~~~~~~~l~~~~~~~~~~~~   67 (296)
                      +.|..+++     .. -|..+.......+.+.+.+... .+..+.    ...       +.+.....+..+++....+..
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~   97 (153)
T PF03151_consen   18 LIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNLS   97 (153)
T ss_pred             HHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence            34555554     22 3555666666666655555432 222110    000       223344555666777788999


Q ss_pred             HhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhh
Q 022507           68 ALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIA  121 (296)
Q Consensus        68 ~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~  121 (296)
                      .+..++++++-+.+++.....+.+.++++++++|+++..++.|+.+.+.|+.+.
T Consensus        98 ~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   98 SFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            999999999999999999999999999999999999999999999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.66  E-value=0.00043  Score=49.54  Aligned_cols=72  Identities=14%  Similarity=0.082  Sum_probs=60.8

Q ss_pred             hHHHHHHHHHHHHHHHHhhhhcccchhHHHHH-HhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhc
Q 022507           52 KKLLPVSLFYNANVAFALASLKGVNIPMYIAI-KRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAAL  123 (296)
Q Consensus        52 ~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~  123 (296)
                      ...+..-+++..+.++...|+|++|.+.+-.+ ...-.+.+++.+++++||+.+..++.++.+.++|++.+-.
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            44555666788888999999999998887654 4577888999999999999999999999999999987643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.61  E-value=0.0011  Score=48.11  Aligned_cols=69  Identities=16%  Similarity=0.120  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccchhHHHHHHh-hHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhh
Q 022507           53 KLLPVSLFYNANVAFALASLKGVNIPMYIAIKR-LTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIA  121 (296)
Q Consensus        53 ~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~-~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~  121 (296)
                      ........+..+.++...+++++|.+.+-.+=+ ..-+.+++.+.+++||+++..++.++.+.+.|++.+
T Consensus        37 ~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         37 YGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            344555667888899999999999998765544 777889999999999999999999999999999875

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.59  E-value=0.0014  Score=57.56  Aligned_cols=137  Identities=18%  Similarity=0.061  Sum_probs=90.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHH--hhhHHHHHHH--HHHHhCCchhhhhhhhcccCchhHHHH
Q 022507          130 LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYN--SFLSLPFLVF--LIIVTGEFPGSLSLLFSKSNSFSFLVI  205 (296)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~--~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (296)
                      ..|+++++++++|++...+-.|| .|+.   ++|.. +-  .+++-++...  .....++..+..     ...+...+..
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w---~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~-----~~~~~~~~~~   75 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKKW---SWETM-WSVGGIFSWLILPWLIAALLLPDFWAYY-----SSFSGSTLLP   75 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCCC---chhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHH-----HhcCHHHHHH
Confidence            47999999999999999999988 4443   44433 22  1111111111  111112222221     1124566777


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCh-hHHHHHhhhhHHHHHHhhheeeCCccc-------chhhHHHHHHHHHHhHHHHHH
Q 022507          206 LILSLVMGIILNFTMFLCTIVNSA-LTTTIVGVLKGVGSTTLGFVVLGGVQV-------RALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       206 ~~~~g~~~~~~~~~~~~~~~~~sa-~~~s~~~~l~pi~~~~~~~~~~~e~~~-------t~~~~~G~~lil~g~~~~~~~  277 (296)
                      -++.|++-...+..++..+|+.+- ....+..-++-+.+.+.+.+++|| -.       ...-.+|.+++++|+.+..+.
T Consensus        76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~ge-w~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGN-FDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccc-cccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            788898888888888888888875 444555566888889999999974 22       145788999999999998874

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.46  E-value=0.00031  Score=59.10  Aligned_cols=81  Identities=16%  Similarity=0.068  Sum_probs=70.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          199 SFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       199 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      +....+....-.++....+...+.+.++.+|.+..+....|.+++.++++++++ ++++..||.+..+...|+.+.....
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~-r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLK-RRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHH-cccchhhHHHHHHHHHHHheeecCC
Confidence            344455667777888888899999999999999999999999999999999998 5999999999999999999887654


Q ss_pred             Hh
Q 022507          279 YQ  280 (296)
Q Consensus       279 ~~  280 (296)
                      ..
T Consensus        92 ~~   93 (244)
T PF04142_consen   92 SQ   93 (244)
T ss_pred             cc
Confidence            43

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.45  E-value=0.00059  Score=50.48  Aligned_cols=60  Identities=10%  Similarity=0.065  Sum_probs=47.8

Q ss_pred             HHHHHHHhccCh-hHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          218 FTMFLCTIVNSA-LTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       218 ~~~~~~~~~~sa-~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      ++...++|+.+- .-+++..-+..+.+.+.|+++||| ++|+.+++|+.++++|++..+...
T Consensus        45 ~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E-~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         45 IFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDE-SLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHhhcCC
Confidence            334456777765 445565667888999999999985 999999999999999999886654

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.37  E-value=7.3e-05  Score=61.19  Aligned_cols=217  Identities=14%  Similarity=0.132  Sum_probs=146.1

Q ss_pred             cccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHH-HHHhhHHHHHHHHHHHhcCccCCccch----hhhhhhhhhh
Q 022507           44 KAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYI-AIKRLTPLAVLVAGFFSGKGKPTTQVT----LSVLLTATGC  118 (296)
Q Consensus        44 ~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~-~l~~~~pv~~~l~~~~~~~e~~~~~~~----~~i~l~~~Gv  118 (296)
                      +..+.+.+..-+..|.+.++.+..++.|.++..+|.+. +-...+.+-+.+++.+.++|..+..+.    .++++.+.|+
T Consensus        52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~  131 (288)
T COG4975          52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI  131 (288)
T ss_pred             CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence            45556555666677778889999999999888777654 334577788899999999999987765    5677777888


Q ss_pred             HhhhcCCc---c-cc----hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhh
Q 022507          119 VIAALGDF---S-FD----LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSL  190 (296)
Q Consensus       119 ~l~~~~~~---~-~~----~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  190 (296)
                      .+-+..|.   + .+    -.|+...+.|.+.|..|.+..|..    +.|.+....-|..--....+.+....+| ... 
T Consensus       132 ~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~-~~~-  205 (288)
T COG4975         132 YLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKME-KRF-  205 (288)
T ss_pred             eEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhcccc-cch-
Confidence            77665442   1 11    368888889999999999988765    2466666655542222222222222211 111 


Q ss_pred             hhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhh----HHHHHH
Q 022507          191 SLLFSKSNSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALN----VTGLLI  266 (296)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~----~~G~~l  266 (296)
                               ....+.-+..|..-...+..++.+-++.+-.+.=.+..+.-+.+.+-|.++++| +=|..+    ++|+++
T Consensus       206 ---------~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~e-kKtkkEm~~v~iGiil  275 (288)
T COG4975         206 ---------NKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGE-KKTKKEMVYVIIGIIL  275 (288)
T ss_pred             ---------HHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEec-cCchhhhhhhhhhHHH
Confidence                     122344567777777778777777666665444445667778888899999996 766554    578888


Q ss_pred             HHHHhHHHHH
Q 022507          267 NTAGGVWYSY  276 (296)
Q Consensus       267 il~g~~~~~~  276 (296)
                      ++.|..+...
T Consensus       276 ivvgai~lg~  285 (288)
T COG4975         276 IVVGAILLGI  285 (288)
T ss_pred             HHHHhhhhhe
Confidence            8888776544

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.27  E-value=0.0022  Score=53.00  Aligned_cols=99  Identities=11%  Similarity=0.080  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCccccccChhhhhHHHHHHHHH-HHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhc
Q 022507           21 LTLQQLATALLIQAGRQMGYTKSKAIDLMTAKKLLPVSLFY-NANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSG   99 (296)
Q Consensus        21 ~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~   99 (296)
                      +..-+.+++++..++.... -...-+++.....-+..+++. +.-..+...+++..|...+.++.++.|.+-++.+++++
T Consensus       180 ~a~gm~vAaviv~Pig~~~-ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L  258 (292)
T COG5006         180 VAVGMLVAALIVLPIGAAQ-AGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFL  258 (292)
T ss_pred             HHHHHHHHHHHHhhhhhhh-cchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHh
Confidence            3444555555555543321 112223444444444555554 36677788899999999999999999999999999999


Q ss_pred             CccCCccchhhhhhhhhhhHh
Q 022507          100 KGKPTTQVTLSVLLTATGCVI  120 (296)
Q Consensus       100 ~e~~~~~~~~~i~l~~~Gv~l  120 (296)
                      +|+++..||+++...+.+.+=
T Consensus       259 ~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         259 GETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             cCCCCHHHHHHHHHHHHHHhc
Confidence            999999999999999887764

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.19  E-value=0.0012  Score=46.73  Aligned_cols=60  Identities=18%  Similarity=0.159  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHHhhhhcccchhHHHHH-HhhHHHHHHHHHHHhcCccCCccchhhhhh
Q 022507           54 LLPVSLFYNANVAFALASLKGVNIPMYIAI-KRLTPLAVLVAGFFSGKGKPTTQVTLSVLL  113 (296)
Q Consensus        54 ~l~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l  113 (296)
                      ......++..+.++...+++++|.+.+-.+ .....+.+++.+.+++||+++..|+.++.+
T Consensus        32 ~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   32 TILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             --HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            334444788888999999999999998554 568999999999999999999999998875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.09  E-value=0.0059  Score=51.69  Aligned_cols=81  Identities=17%  Similarity=0.162  Sum_probs=61.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHh-hhhHHHHHHhhheeeCCcccchhhHH----HHHHHHHHhHHH
Q 022507          200 FSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVG-VLKGVGSTTLGFVVLGGVQVRALNVT----GLLINTAGGVWY  274 (296)
Q Consensus       200 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~-~l~pi~~~~~~~~~~~e~~~t~~~~~----G~~lil~g~~~~  274 (296)
                      ...++.-+++|++-...+..++...++.+.+++-.+. -++-+.+.++|+++||| .-+..+++    +.+++++|+.+.
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgE-W~~~~~~~~G~~Al~liiiGv~lt  120 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGE-WTTTTQKIIGFLALVLIIIGVILT  120 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCC-CCCcchHHHHHHHHHHHHHHHHHh
Confidence            3556677889999999999999998888876655554 45777789999999996 77755544    778888898887


Q ss_pred             HHHHHhh
Q 022507          275 SYAKYQQ  281 (296)
Q Consensus       275 ~~~~~~~  281 (296)
                      ++.++++
T Consensus       121 s~~~~~~  127 (269)
T PF06800_consen  121 SYQDKKS  127 (269)
T ss_pred             ccccccc
Confidence            7655433

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.08  E-value=0.0034  Score=45.80  Aligned_cols=57  Identities=12%  Similarity=0.103  Sum_probs=46.7

Q ss_pred             HHHHHhccCh-hHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          220 MFLCTIVNSA-LTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       220 ~~~~~~~~sa-~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      ...++++.+- ..+++..-+..+.+.+.|+++||| ++|+.+++|+.+++.|++..+..
T Consensus        47 l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e-~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         47 LAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcC
Confidence            4456777765 455666667888999999999985 99999999999999999998654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.04  E-value=0.0013  Score=57.11  Aligned_cols=120  Identities=20%  Similarity=0.110  Sum_probs=82.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHH
Q 022507          128 FDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILI  207 (296)
Q Consensus       128 ~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (296)
                      ....|..+++.++++.+...+++||-..+.+.++.+..  .                +.       .+...++.+|..+ 
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~----------------~~-------~~~l~~~~W~~G~-   57 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--S----------------GG-------RSYLRRPLWWIGL-   57 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--c----------------hh-------hHHHhhHHHHHHH-
Confidence            34679999999999999999999986544211111000  0                00       0111122223333 


Q ss_pred             HHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          208 LSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       208 ~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      ..-+.+.   ...+.++...+++..+.++.+.-++..+++..++|| +++..++.|..+++.|..+....
T Consensus        58 ~~~~~g~---~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e-~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   58 LLMVLGE---ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGE-KLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHHhcch---HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcc-cchHhHHhhHHHHHhhheeeEEe
Confidence            2223333   345567788899999999999999999999999985 99999999999999998876543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.99  E-value=3.9e-05  Score=63.45  Aligned_cols=134  Identities=16%  Similarity=0.172  Sum_probs=89.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHH
Q 022507          131 SGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSL  210 (296)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (296)
                      .|..+.-++ .++....+..++....   +|.+......+.-.+...|..+.-.. + ..   .+.  .-..|  +++-|
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~-~-v~---gp~--g~R~~--LiLRg  104 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQ-P-VI---GPE--GKRKW--LILRG  104 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEee-e-ee---cCC--CcEEE--EEeeh
Confidence            677777777 6666667777776543   56655544422222222221111100 0 00   000  11112  34667


Q ss_pred             HHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          211 VMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       211 ~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      +.++......+++.++.+-.-++++....|+++.+++|++++| +.|....+|..+.+.|+++..+..
T Consensus       105 ~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE-~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  105 FMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKE-PFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcC-CCcHHHHHHHHHhhheEEEEecCC
Confidence            7777777778888899999899999999999999999999995 999999999999999999987643

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.71  E-value=0.012  Score=42.27  Aligned_cols=57  Identities=18%  Similarity=0.246  Sum_probs=48.1

Q ss_pred             HHHHHhccCh-hHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          220 MFLCTIVNSA-LTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       220 ~~~~~~~~sa-~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      .-.++|+.+- +.+++..-...+.+.+.|+++||| +++..+++|..++++|++..+..
T Consensus        47 Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E-~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          47 LSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGE-SLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCC-cCCHHHHHHHHHHHHHHHHhhhc
Confidence            3356777764 667888888999999999999985 99999999999999999987653

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.65  E-value=0.017  Score=42.02  Aligned_cols=57  Identities=14%  Similarity=0.166  Sum_probs=47.3

Q ss_pred             HHHHHHHhccCh-hHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHH
Q 022507          218 FTMFLCTIVNSA-LTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYS  275 (296)
Q Consensus       218 ~~~~~~~~~~sa-~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~  275 (296)
                      ++...+.|+.+. ..+++..-+..+.+.+.|+++||| ++|+.+++|+.+++.|++..+
T Consensus        50 ~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e-~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         50 SALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQ-RLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHhc
Confidence            334456777765 667777888899999999999985 999999999999999998753

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.59  E-value=0.087  Score=45.97  Aligned_cols=142  Identities=15%  Similarity=0.111  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcc--CCCCCHHHHHHHHhhhHHHHHHHHHHHhCCc--hhhhhhhh-cccCchhHHHHHHH
Q 022507          134 SMALTSVFFQTMYLVLVEKSGA--EDGLSSVEIMFYNSFLSLPFLVFLIIVTGEF--PGSLSLLF-SKSNSFSFLVILIL  208 (296)
Q Consensus       134 ~~~l~s~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~  208 (296)
                      ...+...+..+......|...+  +.+..+.+..+-.-++-.++...........  ....+... ..+..+.....+..
T Consensus        18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v   97 (345)
T KOG2234|consen   18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV   97 (345)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence            3344444555555555554332  2346777777777766666655555543211  01111111 11123323445555


Q ss_pred             HHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          209 SLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       209 ~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      -..+....+...+....+.+|.++++...+|...+.++++++++ ++++..||....+..+|+...+.
T Consensus        98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~-rkLs~~Qw~Al~lL~~Gv~~vQ~  164 (345)
T KOG2234|consen   98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILR-RKLSRLQWMALVLLFAGVALVQL  164 (345)
T ss_pred             HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHHHhc
Confidence            66667777788888999999999999999999999999999998 59999999999999999988873

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.59  E-value=0.016  Score=41.91  Aligned_cols=58  Identities=16%  Similarity=0.152  Sum_probs=48.5

Q ss_pred             HHHHHHHhccCh-hHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          218 FTMFLCTIVNSA-LTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       218 ~~~~~~~~~~sa-~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      ++...+.|+.+- ..+++..-+..+.+.+.|+++||| ++|+.+++|+.+++.|++..+.
T Consensus        44 ~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e-~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         44 ALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGE-SASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHhhhc
Confidence            334456777764 667888888999999999999995 9999999999999999988753

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.52  E-value=0.0045  Score=52.05  Aligned_cols=133  Identities=17%  Similarity=0.156  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHH
Q 022507          132 GYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLV  211 (296)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  211 (296)
                      |++.+++|+++++...+=.||.-.   .|++-.+.+......+......+..+. +.             +...-++.|.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~~i~~~g~~v~~~~~~-p~-------------f~p~amlgG~   63 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCSGIFLVGLVVNLILGF-PP-------------FYPWAMLGGA   63 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHHHHHHHHHHHHHhcCC-Cc-------------ceeHHHhhhh
Confidence            677889999999999998887633   277777766665554444444444322 21             1223345555


Q ss_pred             HHHHHHHHHHHHHhccCh-hHHHHHhhhhHHHHHHhhhe-eeCCc----ccchhhHHHHHHHHHHhHHHHHHHHhh
Q 022507          212 MGIILNFTMFLCTIVNSA-LTTTIVGVLKGVGSTTLGFV-VLGGV----QVRALNVTGLLINTAGGVWYSYAKYQQ  281 (296)
Q Consensus       212 ~~~~~~~~~~~~~~~~sa-~~~s~~~~l~pi~~~~~~~~-~~~e~----~~t~~~~~G~~lil~g~~~~~~~~~~~  281 (296)
                      +-...+.+..-.+|..+- .-..+-+..+-+..-..|-+ +||.+    .-++++++|.+++++|..++...|.++
T Consensus        64 lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   64 LWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            555555555555666553 33334444455555555432 55432    235889999999999999998766544

The region concerned is approximately 280 residues long.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.35  E-value=0.14  Score=39.28  Aligned_cols=138  Identities=13%  Similarity=0.077  Sum_probs=89.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHH
Q 022507          130 LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILS  209 (296)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (296)
                      .......+.+.++...+.-++-++.+..+ +|....+.+...++..+..+....+..++..     ...+.+ || ..+.
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a-----~~~~~p-wW-~~~G   75 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA-----AVASAP-WW-AWIG   75 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-----hccCCc-hH-HHHc
Confidence            35567888899999999988888876553 6888888888888888777776643333221     111112 22 2344


Q ss_pred             HHHHHHHHHHHHHHHhccChhHHHHHhhh-hHHHHHHhhheeeC---CcccchhhHHHHHHHHHHhHHHH
Q 022507          210 LVMGIILNFTMFLCTIVNSALTTTIVGVL-KGVGSTTLGFVVLG---GVQVRALNVTGLLINTAGGVWYS  275 (296)
Q Consensus       210 g~~~~~~~~~~~~~~~~~sa~~~s~~~~l-~pi~~~~~~~~~~~---e~~~t~~~~~G~~lil~g~~~~~  275 (296)
                      |.++...-........+.+++++..+... +-+.+.+++-+=+.   ..+++...++|+.++++|+.+.+
T Consensus        76 G~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          76 GLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             cchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            56665555555566777777655544444 55666666654333   12789999999999999955543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.19  E-value=0.062  Score=41.01  Aligned_cols=113  Identities=10%  Similarity=-0.017  Sum_probs=75.6

Q ss_pred             eHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCc-cccccChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHh
Q 022507            7 NKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYT-KSKAIDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKR   85 (296)
Q Consensus         7 nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~   85 (296)
                      |-.+-+..+.|..=++.-+.++.+.+..+....+. +.++.+... +..+..|++.+....+...+.+.+.++....+.-
T Consensus        20 N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p-~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~   98 (138)
T PF04657_consen   20 NGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVP-WWAYLGGLLGVFFVLSNIILVPRLGAALTTILIV   98 (138)
T ss_pred             HHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCC-hHHhccHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence            33333445567776677777766665555443222 222222211 3444478888899999999999998887776554


Q ss_pred             -hHHHHHHHHHHH----hcCccCCccchhhhhhhhhhhHh
Q 022507           86 -LTPLAVLVAGFF----SGKGKPTTQVTLSVLLTATGCVI  120 (296)
Q Consensus        86 -~~pv~~~l~~~~----~~~e~~~~~~~~~i~l~~~Gv~l  120 (296)
                       .+-+...+++.+    .-|+++++.|..++.+.++|+.+
T Consensus        99 ~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   99 AGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence             566666777765    35789999999999999999864

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.60  E-value=0.026  Score=41.17  Aligned_cols=62  Identities=13%  Similarity=0.265  Sum_probs=52.2

Q ss_pred             HHHHHHHHHhhhhcccchhHHHHH-HhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhh
Q 022507           60 FYNANVAFALASLKGVNIPMYIAI-KRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIA  121 (296)
Q Consensus        60 ~~~~~~~~~~~al~~~~~s~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~  121 (296)
                      ++-.+...+++.+...+.|.+.-+ ++++-+++++.++++.+|..+++++.++.+.+.|+.+.
T Consensus        50 lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   50 LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            455666677888999999888877 58999999999988888888999999999999998763

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.93  E-value=0.074  Score=37.56  Aligned_cols=54  Identities=19%  Similarity=0.144  Sum_probs=29.2

Q ss_pred             HHHHH-HHHHHHHhccChhH-HHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHH
Q 022507          213 GIILN-FTMFLCTIVNSALT-TTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLIN  267 (296)
Q Consensus       213 ~~~~~-~~~~~~~~~~sa~~-~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~li  267 (296)
                      .+..+ ++...+.|+.+... +.+..-+..+.+.+.|+.+||| ++|..+++|+.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E-~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE-SLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHhheeeC
Confidence            33334 44456778877644 4666678889999999999985 9999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.48  E-value=0.065  Score=44.34  Aligned_cols=130  Identities=11%  Similarity=0.111  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHH
Q 022507          132 GYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLV  211 (296)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  211 (296)
                      +++.+++=++.|+.......|...    +|.+-+.-+.+ +++......++. ..|..         +...+..-+.+|.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG----~p~qQ~lGtT~-GALifaiiv~~~-~~p~~---------T~~~~iv~~isG~   67 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG----KPYQQTLGTTL-GALIFAIIVFLF-VSPEL---------TLTIFIVGFISGA   67 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC----ChhHhhhhccH-HHHHHHHHHhee-ecCcc---------chhhHHHHHHhhh
Confidence            567788888889888777666532    44444433333 333333333222 11111         3444556678888


Q ss_pred             HHHHHHHHHHHHHhccChhHHHHHh-hhhHHHHHHhhheeeCCcccchhhHH----HHHHHHHHhHHHHHH
Q 022507          212 MGIILNFTMFLCTIVNSALTTTIVG-VLKGVGSTTLGFVVLGGVQVRALNVT----GLLINTAGGVWYSYA  277 (296)
Q Consensus       212 ~~~~~~~~~~~~~~~~sa~~~s~~~-~l~pi~~~~~~~~~~~e~~~t~~~~~----G~~lil~g~~~~~~~  277 (296)
                      +-...+..++++.+..+.+.+..+. -.+-+-+.++|++.||| ..+..+++    ..++++.|..+.++.
T Consensus        68 ~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~E-W~t~~~~IlG~iAliliviG~~lTs~~  137 (288)
T COG4975          68 FWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHE-WTTPTQIILGFIALILIVIGIYLTSKQ  137 (288)
T ss_pred             HhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEec-cCcchhHHHHHHHHHHHHHhheEeeee
Confidence            8888888888888776655554433 34778889999999995 88876653    455666676665543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.29  E-value=0.053  Score=47.53  Aligned_cols=79  Identities=13%  Similarity=0.082  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhh
Q 022507          202 FLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQ  281 (296)
Q Consensus       202 ~~~~~~~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~  281 (296)
                      ....-++.|.+-+..++....+++.++....+++....-.++..+|.++.+| ++|....++..+.++|+++....+.++
T Consensus       158 ~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e-~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  158 TAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVE-RFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcc-hhhHHHHHHHHHhhccEEEEEeccccc
Confidence            3445677888999999999999999999999999999999999999998875 999999999999999999988765443

>TIGR00803 nst UDP-galactose transporter

Probab=94.25  E-value=0.098  Score=43.34  Aligned_cols=67  Identities=10%  Similarity=0.004  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHh
Q 022507           54 LLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI  120 (296)
Q Consensus        54 ~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l  120 (296)
                      .+...+..+....+....+++.+.....+...+.++++.+++.++++|+++..++.++.+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3344455666666778889999999999999999999999999999999999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.13  E-value=0.098  Score=44.66  Aligned_cols=75  Identities=12%  Similarity=0.065  Sum_probs=66.4

Q ss_pred             cChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHh
Q 022507           46 IDLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVI  120 (296)
Q Consensus        46 ~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l  120 (296)
                      ..++.+++++..+.+.+.++.+.++-++.-.+-..+.+..+.=++..+++.++++++++..+|.++...+.|..+
T Consensus       236 ~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  236 EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            345677899999999999999998888877777778888899999999999999999999999999999999876

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.08  E-value=3.9  Score=35.89  Aligned_cols=141  Identities=18%  Similarity=0.072  Sum_probs=72.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHH-HHhhhHHHHHHHHHHH--hCCchhhhhhhhcccCchhHHHHH
Q 022507          130 LSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMF-YNSFLSLPFLVFLIIV--TGEFPGSLSLLFSKSNSFSFLVIL  206 (296)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  206 (296)
                      ..|+++..+++++.+.+.+=.||. |+-   +||... .+.+++-++..+....  .+|..+...   ..  +...+...
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv-k~W---sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~---~~--~~~~l~~~   76 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV-KGW---SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYS---AT--PASTLFWT   76 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc-CCc---cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHH---hC--ChhHHHHH
Confidence            479999999999999999998887 332   333332 3334443333332222  233333322   11  22233334


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCh-hHHHHHhhhhHHHHHHhhhee-------eCCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          207 ILSLVMGIILNFTMFLCTIVNSA-LTTTIVGVLKGVGSTTLGFVV-------LGGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       207 ~~~g~~~~~~~~~~~~~~~~~sa-~~~s~~~~l~pi~~~~~~~~~-------~~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      .+.|++--..+...-..+|+.+- ...++.--+..++..++--++       ++ ++-...-++|.+++++|+....+.-
T Consensus        77 ~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~-~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   77 FLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLA-TPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             HHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccccccc-CCCchhhhhHHHHHHHHHHHHhHHH
Confidence            44444433333333344555542 223332222222222221111       22 1334578899999999999987754


Q ss_pred             Hh
Q 022507          279 YQ  280 (296)
Q Consensus       279 ~~  280 (296)
                      ..
T Consensus       156 ~~  157 (344)
T PF06379_consen  156 SM  157 (344)
T ss_pred             Hh
Confidence            33

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.55  E-value=1.9  Score=33.22  Aligned_cols=114  Identities=12%  Similarity=0.022  Sum_probs=68.0

Q ss_pred             eHHHHhcCCCchHHHHHHHHHHHHHHHHHHhcCCccccccC--hhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHH-HH
Q 022507            7 NKAVIMQYAHSMTLLTLQQLATALLIQAGRQMGYTKSKAID--LMTAKKLLPVSLFYNANVAFALASLKGVNIPMYI-AI   83 (296)
Q Consensus         7 nK~~l~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~-~l   83 (296)
                      |-.+-+..+.|..=.+..+.++..++..+...+. +++...  ++..+..+..|++.+.....+......+.++..+ +.
T Consensus        24 N~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~  102 (150)
T COG3238          24 NGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTIALV  102 (150)
T ss_pred             HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHHHHH
Confidence            3334444566777777777776666665554422 222221  2222334444555556665555666666555444 45


Q ss_pred             HhhHHHHHHHHHHHhc----CccCCccchhhhhhhhhhhHhh
Q 022507           84 KRLTPLAVLVAGFFSG----KGKPTTQVTLSVLLTATGCVIA  121 (296)
Q Consensus        84 ~~~~pv~~~l~~~~~~----~e~~~~~~~~~i~l~~~Gv~l~  121 (296)
                      ...+-+.-++++.+=+    +++++..++.++++.++|+.+.
T Consensus       103 i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238         103 IAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             HHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            5566666677765433    4888999999999999995543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.85  E-value=5  Score=34.81  Aligned_cols=136  Identities=12%  Similarity=-0.002  Sum_probs=91.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCCCH-HHHHHHHhhhHHHHHHHHHHHhC-CchhhhhhhhcccCchhHHHHHHH
Q 022507          131 SGYSMALTSVFFQTMYLVLVEKSGAEDGLSS-VEIMFYNSFLSLPFLVFLIIVTG-EFPGSLSLLFSKSNSFSFLVILIL  208 (296)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  208 (296)
                      .....++..+++..+-.+..|.....++.+. ..+..+|++.+.+.+...-..-- +..+.      ++....-|.   -
T Consensus        12 ~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l------~~~~~kk~~---P   82 (314)
T KOG1444|consen   12 SPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL------DLRTAKKWF---P   82 (314)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc------ChHHHHHHc---c
Confidence            3467777788888888888888887776444 33445888887777665433210 11111      111122221   1


Q ss_pred             HHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHH
Q 022507          209 SLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSY  276 (296)
Q Consensus       209 ~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~  276 (296)
                      ..++-++..+......++.+-....++..+.|+.+.+....++| .+++...+.....+++|...+..
T Consensus        83 ~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~-~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   83 VSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFG-KRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             HHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcC-cCchhhHHHHHHHHHHHHHhhcc
Confidence            12222333344556789999999999999999999999999998 59999999999999998777653

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=91.17  E-value=0.062  Score=45.16  Aligned_cols=98  Identities=9%  Similarity=0.016  Sum_probs=0.0

Q ss_pred             hcccchhHHHHHHhhHHHHHHHHHH-HhcCcc-CCccchhhhhhhhhhhHhhhcCCc--ccchhHHHHHHHHHHHHHHHH
Q 022507           72 LKGVNIPMYIAIKRLTPLAVLVAGF-FSGKGK-PTTQVTLSVLLTATGCVIAALGDF--SFDLSGYSMALTSVFFQTMYL  147 (296)
Q Consensus        72 l~~~~~s~~~~l~~~~pv~~~l~~~-~~~~e~-~~~~~~~~i~l~~~Gv~l~~~~~~--~~~~~G~~~~l~s~~~~a~~~  147 (296)
                      ++-.+-+..+++.+.+.+.+.++-. .++||| .-..-.+|+++.++-..+...-..  +.-+.|+++.+++....-.-+
T Consensus        44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW  123 (381)
T PF05297_consen   44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVW  123 (381)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            3344445555666655554444433 333544 456777788877766655443322  223467766665555444444


Q ss_pred             HHHHHhccCCCCCHHHHHHHHhh
Q 022507          148 VLVEKSGAEDGLSSVEIMFYNSF  170 (296)
Q Consensus       148 v~~k~~~~~~~~~~~~~~~~~~~  170 (296)
                      .| -.+.++++.+-|++..+...
T Consensus       124 ~Y-m~lLr~~GAs~WtiLaFcLA  145 (381)
T PF05297_consen  124 FY-MWLLRELGASFWTILAFCLA  145 (381)
T ss_dssp             -----------------------
T ss_pred             HH-HHHHHHhhhHHHHHHHHHHH
Confidence            44 34667788888888866543

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=90.23  E-value=0.13  Score=41.05  Aligned_cols=63  Identities=19%  Similarity=0.212  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          214 IILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       214 ~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      .+.++.+..++++.+|+.++-+..-+..+..+++++++|| ++....++..++.+.|+++.++.
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D-~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGD-RFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhcc-chhhhhHHHHHHHhCcEEEEEec
Confidence            4456777888999999999999999999999999999997 99999999999999998887654

>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses

Probab=89.96  E-value=0.53  Score=27.55  Aligned_cols=39  Identities=21%  Similarity=-0.024  Sum_probs=18.1

Q ss_pred             cchhhHHHHHHHHHHh------HHHHHHHHhhhhccCCcchHhhh
Q 022507          256 VRALNVTGLLINTAGG------VWYSYAKYQQKKKKLPKSDVEAY  294 (296)
Q Consensus       256 ~t~~~~~G~~lil~g~------~~~~~~~~~~~~~~~~~~~~~~~  294 (296)
                      ++|..++=.+++++|+      ..|...++.+.+++++++.++++
T Consensus         2 p~wlt~iFsvvIil~If~~iGl~IyQkikqIrgKkk~KKeie~ke   46 (49)
T PF11044_consen    2 PTWLTTIFSVVIILGIFAWIGLSIYQKIKQIRGKKKEKKEIERKE   46 (49)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHh
Confidence            3455555555555554      44444444444444444444443

The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=89.83  E-value=0.33  Score=39.98  Aligned_cols=73  Identities=5%  Similarity=-0.023  Sum_probs=63.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhh
Q 022507           50 TAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAA  122 (296)
Q Consensus        50 ~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~  122 (296)
                      .++.+...++..++.+++.+.-..+-++-.-++...+.-.|+.+.+.++++.+++.+||++.++.+.|...-.
T Consensus       240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            3467778888888889888888887777777888889999999999999999999999999999999887644

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=89.79  E-value=0.052  Score=46.66  Aligned_cols=125  Identities=18%  Similarity=0.217  Sum_probs=85.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHH
Q 022507          128 FDLSGYSMALTSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILI  207 (296)
Q Consensus       128 ~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (296)
                      .+..|.++++.|.+..+...+..||..++.+...   .-+              -.|+.        ++... ..||.-+
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~---~ra--------------~~gg~--------~yl~~-~~Ww~G~   71 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASG---LRA--------------GEGGY--------GYLKE-PLWWAGM   71 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHHHhhhc---ccc--------------cCCCc--------chhhh-HHHHHHH
Confidence            4568999999999999999988888765532100   000              00111        11112 3344433


Q ss_pred             HHHHHHHHHHHHHHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHHHhhh
Q 022507          208 LSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAKYQQK  282 (296)
Q Consensus       208 ~~g~~~~~~~~~~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~~~~~  282 (296)
                      +.-..+=   ..-|.+....+++-++.++.+.-+...+++..+++ |+++....+|.+++++|........++++
T Consensus        72 ltm~vGe---i~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~-Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   72 LTMIVGE---IANFAAYAFAPASLVTPLGALSVIISAILASFFLK-EKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HHHHHHh---HhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHH-HHHHHhhhhheeEEecccEEEEEecCccc
Confidence            3333333   44445668888999999999999999999999997 59999999999999999887765544433

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=87.44  E-value=6.5  Score=34.43  Aligned_cols=129  Identities=13%  Similarity=0.078  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHhccCCC-CCHHHHHHHHhhhHHHHHHHHHHHhCCchhhhhhhhcccCchhHHHHHHHHHHHHHHHHHH
Q 022507          141 FFQTMYLVLVEKSGAEDG-LSSVEIMFYNSFLSLPFLVFLIIVTGEFPGSLSLLFSKSNSFSFLVILILSLVMGIILNFT  219 (296)
Q Consensus       141 ~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  219 (296)
                      ++....+++.|++.++++ --|+.++......+.+........ +..+..      ...+...+.-++-.++........
T Consensus        27 ~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l-~~~~~~------~~~~~~~~~~llpl~~~~~~~~v~   99 (316)
T KOG1441|consen   27 VLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVL-KLVPPS------KISSKLPLRTLLPLGLVFCISHVL   99 (316)
T ss_pred             hhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCC------ccccccchHHHHHHHHHHHHHHHh
Confidence            344445667788877533 345555555444444444433322 221111      111223455566667777776777


Q ss_pred             HHHHHhccChhHHHHHhhhhHHHHHHhhheeeCCcccch----------------------hhHHHHHHHHHHhHHHHHH
Q 022507          220 MFLCTIVNSALTTTIVGVLKGVGSTTLGFVVLGGVQVRA----------------------LNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       220 ~~~~~~~~sa~~~s~~~~l~pi~~~~~~~~~~~e~~~t~----------------------~~~~G~~lil~g~~~~~~~  277 (296)
                      ....+++.+-..+.++-.+.|++++++++++.+| +.+.                      .++.|....+++.+....+
T Consensus       100 ~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~-~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~  178 (316)
T KOG1441|consen  100 GNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGK-TYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALR  178 (316)
T ss_pred             cchhhhccchhHHHHHHhhcchhHHHHHHHHhCC-CCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHH
Confidence            7788899999999999999999999999999985 6654                      6778888888887766544

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=86.79  E-value=1.6  Score=35.87  Aligned_cols=76  Identities=14%  Similarity=0.077  Sum_probs=63.0

Q ss_pred             ChhhhhHHHHHHHHHHHHHHHHhhhhcccchhHHHHHHhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhh
Q 022507           47 DLMTAKKLLPVSLFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAA  122 (296)
Q Consensus        47 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~s~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~  122 (296)
                      +.+.+..++..|++..+..++.-++++-++..++.+.-++.-...++-+.++++|+.++.++.++.++++..++..
T Consensus       220 ~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa  295 (309)
T COG5070         220 SVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA  295 (309)
T ss_pred             ChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence            3444456667777777888888899999999999999999999999999999999999999999988887776654

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=83.17  E-value=2.1  Score=31.33  Aligned_cols=52  Identities=15%  Similarity=0.059  Sum_probs=38.7

Q ss_pred             HHHHhccChhHHHHH-hhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHH
Q 022507          221 FLCTIVNSALTTTIV-GVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVW  273 (296)
Q Consensus       221 ~~~~~~~sa~~~s~~-~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~  273 (296)
                      +..+++.+-+.+..+ +.+.-+++++.|+++. ||..+...++|+++++.|+.+
T Consensus        59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lg-e~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLG-EEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHhcCCceeeehHHhHHHHHHHHHHHHHhc-CcccchhHHHHHHHHHcCeee
Confidence            344566664444333 5778899999998876 568888999999999999754

Many members are annotated as potential transmembrane proteins.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	296
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.57
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.55
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.48
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.11

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.57  E-value=3.9e-07  Score=65.83  Aligned_cols=72  Identities=13%  Similarity=0.098  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHHHHhhhhcccchhHHHHH-HhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcCC
Q 022507           54 LLPVSLFYNANVAFALASLKGVNIPMYIAI-KRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALGD  125 (296)
Q Consensus        54 ~l~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~~  125 (296)
                      .+...+.+..+.++...++++.|.+.+..+ ..+.|+++++.+++++||+++..++.++.+.++|++++...+
T Consensus        33 ~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344455678888999999999999999888 899999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.55  E-value=7.5e-08  Score=72.17  Aligned_cols=61  Identities=10%  Similarity=0.056  Sum_probs=43.8

Q ss_pred             HHHHHHHHhccChhHHHHH-hhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHHH
Q 022507          217 NFTMFLCTIVNSALTTTIV-GVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYAK  278 (296)
Q Consensus       217 ~~~~~~~~~~~sa~~~s~~-~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~~  278 (296)
                      .+++..++++.++..+..+ ..+.|+++.++|+++||| ++|+.+++|++++++|+++.+..+
T Consensus        44 ~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE-~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           44 FWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3566788999999988777 899999999999999995 999999999999999999987644

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.48  E-value=3.7e-07  Score=68.35  Aligned_cols=71  Identities=13%  Similarity=0.097  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHHHHhhhhcccchhHHHHH-HhhHHHHHHHHHHHhcCccCCccchhhhhhhhhhhHhhhcC
Q 022507           54 LLPVSLFYNANVAFALASLKGVNIPMYIAI-KRLTPLAVLVAGFFSGKGKPTTQVTLSVLLTATGCVIAALG  124 (296)
Q Consensus        54 ~l~~~~~~~~~~~~~~~al~~~~~s~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~i~l~~~Gv~l~~~~  124 (296)
                      .+...+.++...++.+.++++.|++.+..+ .++.|+++++++++++||++++.++.++.+.++|++++...
T Consensus        33 ~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             -CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            345556688999999999999999988888 89999999999999999999999999999999999987653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.11  E-value=1e-05  Score=58.37  Aligned_cols=59  Identities=10%  Similarity=0.075  Sum_probs=52.3

Q ss_pred             HHHHHHHhccChhHHHHH-hhhhHHHHHHhhheeeCCcccchhhHHHHHHHHHHhHHHHHH
Q 022507          218 FTMFLCTIVNSALTTTIV-GVLKGVGSTTLGFVVLGGVQVRALNVTGLLINTAGGVWYSYA  277 (296)
Q Consensus       218 ~~~~~~~~~~sa~~~s~~-~~l~pi~~~~~~~~~~~e~~~t~~~~~G~~lil~g~~~~~~~  277 (296)
                      ++...++|+.+...+..+ ..+.|+.+.+.|++++|| ++|+.+++|+.+++.|++..+..
T Consensus        45 ~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E-~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           45 WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhcC
Confidence            555678899999888777 899999999999999995 99999999999999999988653

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00