Citrus Sinensis ID: 022574


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
MVVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPEKYSFPGG
cccccccccccccHHHHHHHcccccccccEEEccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccccccccHHHcccccccccccccccccccccccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHHcccEEEccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccc
ccccccccccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccccccccccccccHHcccccccccccccccccccccccHHHHHHHHHHHHHccHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHccc
mvvgsrvsvpswmSAAAATRVDLEGSVSSVtvssetsskeeALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAqaagvpyeglcrtasfesnmmlsdmrnspsctcavpgtepapecnrykgtLDLFYKVVRQEGFARLWRGTYASLAlsvptvgiylpcydgfrnlmenfttgnapmltpyvplvAGSVARSLACISCYPIELARTRMQAFtetqsgvkppgvwKTLVGVvnplksrnssqklqNYRILWTGVGaqlardvpfsaicwstlepekysfpgg
mvvgsrvsvpswmSAAAATRVDLEGSVSSVTVssetsskeealRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAqaagvpyeGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTetqsgvkppgvWKTLVGVVnplksrnssqklqNYRILWTGVGAQLARDVPFSAICWStlepekysfpgg
MVVGSRVSVPSWMSAAAATRVDLEGsvssvtvssetsskeeALRHSEAINDFSLgfaerafsaagaaivsavivNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPEKYSFPGG
************************************************INDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFE*************CTCAVPGT**APECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLK*****QKLQNYRILWTGVGAQLARDVPFSAICWSTL**********
*********PSWMSAAA***************************************AERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAG****GLCRTASFESNMMLSDMRNSPSCTCA**********NRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLME**********TPYVPLVAGSVARSLACISCYPIELARTR*****************KTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPEKYSFPGG
**********SWMSAAAATR***********************RHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPEKYSFPGG
*****RVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPEKYSFPG*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooo
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MVVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPEKYSFPGG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query295 2.2.26 [Sep-21-2011]
Q944H5 413 Mitochondrial carrier pro no no 0.844 0.602 0.600 2e-81
Q6DHC3 353 Solute carrier family 25 yes no 0.688 0.575 0.338 7e-24
Q8TBP6 338 Solute carrier family 25 yes no 0.674 0.588 0.323 2e-22
Q0VCH6 338 Solute carrier family 25 yes no 0.674 0.588 0.314 6e-22
Q498U3 337 Solute carrier family 25 yes no 0.681 0.596 0.317 2e-21
Q9BZJ4 359 Solute carrier family 25 no no 0.722 0.593 0.302 7e-21
Q17QI7 359 Solute carrier family 25 no no 0.725 0.596 0.299 7e-21
Q4V8K4 359 Solute carrier family 25 no no 0.738 0.607 0.300 5e-20
Q9D8K8 359 Solute carrier family 25 yes no 0.725 0.596 0.299 6e-20
Q552L9 366 Mitochondrial substrate c yes no 0.610 0.491 0.302 1e-19
>sp|Q944H5|MTM1_ARATH Mitochondrial carrier protein MTM1 OS=Arabidopsis thaliana GN=MTM1 PE=2 SV=1 Back     alignment and function desciption
 Score =  302 bits (774), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/258 (60%), Positives = 189/258 (73%), Gaps = 9/258 (3%)

Query: 46  SEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPY-----EGLCRTA 100
            + +++ ++GF ER FSAAGAA++SAV +NPLDV KTRLQAQAAG+ Y       + R A
Sbjct: 51  DKGLSENNIGFTERVFSAAGAAVLSAVTLNPLDVVKTRLQAQAAGMSYSHPLSNSIGRMA 110

Query: 101 SFESNMMLSDMRNSPSCTCA-VPGTEPA--PECNRYKGTLDLFYKVVRQEGFARLWRGTY 157
            F  NMM +D+R SPSC  A V GT     P+C +YKGT D+F K++RQEG  RLWRGT 
Sbjct: 111 FFGPNMMFADLRCSPSCARAGVEGTVSICPPDCFQYKGTFDVFTKIIRQEGLGRLWRGTN 170

Query: 158 ASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIEL 217
           A LAL+VP VGIYLP YD FRN +E  +   AP +T  VP VAGS+ARSLAC  CYPI+L
Sbjct: 171 AGLALAVPMVGIYLPFYDMFRNRLEELSREKAPAMTFCVPTVAGSLARSLACTVCYPIDL 230

Query: 218 ARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQ-KLQNYRILWTGVGAQLARDVP 276
           ARTRMQAF E ++GVKPPGV+KTLVGV + +++ N+ +  L NYR LW G+GAQLARDVP
Sbjct: 231 ARTRMQAFKEAKAGVKPPGVFKTLVGVFSEVRTANNLESSLHNYRGLWRGLGAQLARDVP 290

Query: 277 FSAICWSTLEPEKYSFPG 294
           FSAICWSTLEP K    G
Sbjct: 291 FSAICWSTLEPIKKRLLG 308




Involved in the mitochondrial activation of MSD1 by specifically facilitating insertion of the essential manganese cofactor. Has the ability to activate iron regulon in an iron-dependent manner.
Arabidopsis thaliana (taxid: 3702)
>sp|Q6DHC3|S2540_DANRE Solute carrier family 25 member 40 OS=Danio rerio GN=slc25a40 PE=2 SV=1 Back     alignment and function description
>sp|Q8TBP6|S2540_HUMAN Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=2 SV=1 Back     alignment and function description
>sp|Q0VCH6|S2540_BOVIN Solute carrier family 25 member 40 OS=Bos taurus GN=SLC25A40 PE=2 SV=1 Back     alignment and function description
>sp|Q498U3|S2540_RAT Solute carrier family 25 member 40 OS=Rattus norvegicus GN=Slc25a40 PE=2 SV=2 Back     alignment and function description
>sp|Q9BZJ4|S2539_HUMAN Solute carrier family 25 member 39 OS=Homo sapiens GN=SLC25A39 PE=2 SV=2 Back     alignment and function description
>sp|Q17QI7|S2539_BOVIN Solute carrier family 25 member 39 OS=Bos taurus GN=SLC25A39 PE=2 SV=2 Back     alignment and function description
>sp|Q4V8K4|S2539_RAT Solute carrier family 25 member 39 OS=Rattus norvegicus GN=Slc25a39 PE=2 SV=1 Back     alignment and function description
>sp|Q9D8K8|S2539_MOUSE Solute carrier family 25 member 39 OS=Mus musculus GN=Slc25a39 PE=2 SV=1 Back     alignment and function description
>sp|Q552L9|S2540_DICDI Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query295
225454448 407 PREDICTED: solute carrier family 25 memb 0.989 0.717 0.681 1e-112
147812722 528 hypothetical protein VITISV_014580 [Viti 0.983 0.549 0.671 1e-111
297745394374 unnamed protein product [Vitis vinifera] 0.844 0.665 0.715 1e-102
224064175 399 predicted protein [Populus trichocarpa] 0.942 0.696 0.675 1e-101
449432094 404 PREDICTED: solute carrier family 25 memb 0.986 0.720 0.631 6e-99
242079023 399 hypothetical protein SORBIDRAFT_07g01943 0.986 0.729 0.663 8e-99
226507384 398 mitochondrial carrier protein CGI-69 [Ze 0.983 0.728 0.666 3e-98
194696384 398 unknown [Zea mays] 0.983 0.728 0.666 7e-98
413922178 398 carrier protein CGI-69 [Zea mays] 0.983 0.728 0.666 7e-98
308080630 399 uncharacterized protein LOC100502509 [Ze 0.986 0.729 0.649 2e-97
>gi|225454448|ref|XP_002276620.1| PREDICTED: solute carrier family 25 member 39-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/298 (68%), Positives = 244/298 (81%), Gaps = 6/298 (2%)

Query: 2   VVGSRVSVPSWMSAAAATRVDLEGSVSSVTVSSETSSKEEAL---RHSEAINDFSLGFAE 58
           +VGSR S+PSW+  AAATRVD+EG+VSS++ +    ++EE+    ++S+A++D  LGF +
Sbjct: 1   MVGSRPSLPSWI-GAAATRVDIEGNVSSMSDTMFRENREESAPPEQYSKALSDGDLGFGQ 59

Query: 59  RAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCT 118
           RAFSAAGAA +SA+IVNPLDVAKTRLQAQAAGV Y GLCR A FE+  M SD+R SPSCT
Sbjct: 60  RAFSAAGAAFISAIIVNPLDVAKTRLQAQAAGVSYHGLCRMAPFETVSMFSDVRYSPSCT 119

Query: 119 CAVPGTEPA--PECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDG 176
            A     P   P+C +Y+GTLD+F K++RQEGF RLWRGT ASLAL++PTVGIYLPCYD 
Sbjct: 120 RAALSDVPVCPPDCFQYRGTLDVFSKMIRQEGFMRLWRGTSASLALAMPTVGIYLPCYDI 179

Query: 177 FRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPG 236
           FRN ME FTT NAP LTPYVPLVAGS+ARSLACI+CYP+ELARTRMQAF ETQSG KPPG
Sbjct: 180 FRNFMEEFTTQNAPSLTPYVPLVAGSLARSLACITCYPVELARTRMQAFKETQSGTKPPG 239

Query: 237 VWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPEKYSFPG 294
           VWKTL GV++P++S N+ Q  Q+YR+LWTG+GAQLARDVPFSAICWSTLEP +    G
Sbjct: 240 VWKTLHGVISPVRSTNNIQNFQSYRVLWTGLGAQLARDVPFSAICWSTLEPIRRRIIG 297




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147812722|emb|CAN61750.1| hypothetical protein VITISV_014580 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745394|emb|CBI40474.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224064175|ref|XP_002301398.1| predicted protein [Populus trichocarpa] gi|222843124|gb|EEE80671.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449432094|ref|XP_004133835.1| PREDICTED: solute carrier family 25 member 40-like [Cucumis sativus] gi|449477895|ref|XP_004155155.1| PREDICTED: solute carrier family 25 member 40-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|242079023|ref|XP_002444280.1| hypothetical protein SORBIDRAFT_07g019430 [Sorghum bicolor] gi|241940630|gb|EES13775.1| hypothetical protein SORBIDRAFT_07g019430 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|226507384|ref|NP_001150430.1| mitochondrial carrier protein CGI-69 [Zea mays] gi|195639200|gb|ACG39068.1| mitochondrial carrier protein CGI-69 [Zea mays] Back     alignment and taxonomy information
>gi|194696384|gb|ACF82276.1| unknown [Zea mays] Back     alignment and taxonomy information
>gi|413922178|gb|AFW62110.1| carrier protein CGI-69 [Zea mays] Back     alignment and taxonomy information
>gi|308080630|ref|NP_001183916.1| uncharacterized protein LOC100502509 [Zea mays] gi|238015420|gb|ACR38745.1| unknown [Zea mays] gi|414870516|tpg|DAA49073.1| TPA: hypothetical protein ZEAMMB73_432177 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query295
TAIR|locus:2039055 361 AT2G46320 [Arabidopsis thalian 0.718 0.587 0.675 2.4e-76
TAIR|locus:2132947 413 MTM1 "AT4G27940" [Arabidopsis 0.728 0.520 0.625 8.2e-67
DICTYBASE|DDB_G0275985 366 mcfH "mitochondrial substrate 0.511 0.412 0.363 3.3e-20
SGD|S000003489 366 MTM1 "Mitochondrial protein of 0.491 0.396 0.322 1.5e-18
UNIPROTKB|E2RLV6338 SLC25A40 "Uncharacterized prot 0.461 0.402 0.373 3.8e-17
ASPGD|ASPL0000002744 466 AN6087 [Emericella nidulans (t 0.515 0.326 0.350 5.9e-17
FB|FBgn0031039 387 Shawn "Shawn" [Drosophila mela 0.654 0.498 0.321 9.7e-17
UNIPROTKB|Q8TBP6338 SLC25A40 "Solute carrier famil 0.461 0.402 0.366 1.9e-16
UNIPROTKB|F1NFV0339 SLC25A40 "Uncharacterized prot 0.467 0.407 0.355 3.3e-16
UNIPROTKB|B4DFG5336 SLC25A39 "Solute carrier famil 0.464 0.407 0.366 5.4e-16
TAIR|locus:2039055 AT2G46320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
 Identities = 148/219 (67%), Positives = 172/219 (78%)

Query:    75 NPLDVAKTRLQAQAAGVPYEGLCRTASFESNMML-SDMR-NSPSCTCAVPGTEPAPECNR 132
             NPLDV KTRLQAQAAGVPY+G CR   F++N  L  D+R NS    C + G+      N+
Sbjct:    40 NPLDVVKTRLQAQAAGVPYQGSCRLGCFDTNSTLVHDLRSNSAPGMCRITGSASVCSDNQ 99

Query:   133 YKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPML 192
             YKGTLD+FYK++RQEGF+RLWRGT ASL L++PTVGIY+PCYD FRN+ME FTT  +P L
Sbjct:   100 YKGTLDVFYKIIRQEGFSRLWRGTNASLTLAIPTVGIYMPCYDYFRNIMEEFTTEKSPSL 159

Query:   193 TPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRN 252
             T YVPLVAG++ARSLACISCYP+ELARTRMQAF  TQ  VK PGVWKTLV VVNP+K  N
Sbjct:   160 TVYVPLVAGTIARSLACISCYPVELARTRMQAFKGTQRNVKLPGVWKTLVDVVNPVKGSN 219

Query:   253 SSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPEKYS 291
             +      YR+LWTG+GAQLARDVPFSAICWS LEP + S
Sbjct:   220 NG-----YRMLWTGLGAQLARDVPFSAICWSILEPTRRS 253




GO:0005215 "transporter activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2132947 MTM1 "AT4G27940" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0275985 mcfH "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
SGD|S000003489 MTM1 "Mitochondrial protein of the mitochondrial carrier family" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|E2RLV6 SLC25A40 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ASPGD|ASPL0000002744 AN6087 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
FB|FBgn0031039 Shawn "Shawn" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q8TBP6 SLC25A40 "Solute carrier family 25 member 40" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NFV0 SLC25A40 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|B4DFG5 SLC25A39 "Solute carrier family 25 member 39" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00026981001
SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (409 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-06
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 5e-06
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 79.6 bits (197), Expect = 6e-19
 Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 38/129 (29%)

Query: 53  SLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMR 112
            L F     +   A  ++A +  PLDV KTRLQ+ AAG                      
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSR------------------- 42

Query: 113 NSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLP 172
                              +YKG LD F K+ ++EG   L++G   +L    P   IY  
Sbjct: 43  -------------------KYKGILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFG 83

Query: 173 CYDGFRNLM 181
            Y+  + L+
Sbjct: 84  TYETLKKLL 92


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 295
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0752 320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.98
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.96
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.95
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.95
KOG0766 297 consensus Predicted mitochondrial carrier protein 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0036463 consensus Predicted mitochondrial carrier protein 99.95
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.95
KOG0036463 consensus Predicted mitochondrial carrier protein 99.95
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.94
KOG0770353 consensus Predicted mitochondrial carrier protein 99.94
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.94
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.93
KOG0765 333 consensus Predicted mitochondrial carrier protein 99.93
KOG0768 323 consensus Mitochondrial carrier protein PET8 [Ener 99.93
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.9
KOG0769308 consensus Predicted mitochondrial carrier protein 99.9
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.9
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.89
KOG0750 304 consensus Mitochondrial solute carrier protein [En 99.89
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.71
KOG1519297 consensus Predicted mitochondrial carrier protein 99.68
KOG2745321 consensus Mitochondrial carrier protein [General f 99.61
KOG2954427 consensus Mitochondrial carrier protein [General f 99.41
KOG1519297 consensus Predicted mitochondrial carrier protein 99.38
KOG2745321 consensus Mitochondrial carrier protein [General f 99.19
KOG2954427 consensus Mitochondrial carrier protein [General f 98.26
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=2.1e-41  Score=292.80  Aligned_cols=219  Identities=23%  Similarity=0.280  Sum_probs=196.3

Q ss_pred             ccccccccccccccccccccCCCcCCCCCCCHHHHHHHHhHHHHHHHHHhccHHHHHHHHHhhccCCCCCCccccccccc
Q 022574           25 GSVSSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFES  104 (295)
Q Consensus        25 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vKtr~Q~~~~~~~~~~~~~~~~~~~  104 (295)
                      -++++++++.||..++.+....+..  ...+.+..++||+.+|+++.++.+|.|+||+|||+++..+.            
T Consensus        95 ~~y~~iRig~Yd~~k~~~~~~~~~~--~~~~l~~~~l~G~taGaia~~~AnPtDlVKVrmQaeG~~~~------------  160 (317)
T KOG0753|consen   95 ASYGGIRIGLYDSLKELYVEKGEDE--ESLPLWKSILCGVTAGAIAQALANPTDLVKVRMQAEGRLRL------------  160 (317)
T ss_pred             heecceEEEehHHHHHHhccCCCCc--ccccHHHHHHHHHhhhHHHHHhcCccceEEEEeeehhhhcc------------
Confidence            3468999999999987766665433  77899999999999999999999999999999999985431            


Q ss_pred             chhhhccCCCCCCcCCCCCCCCCCCccCCCchhHHHHHHHhhhchhhhccccchhhhhhcccceeehhHHHHHHHHHhhh
Q 022574          105 NMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENF  184 (295)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gLyrG~~~~l~~~~~~~~~~f~~y~~~k~~l~~~  184 (295)
                                            .....+|.+..+++++|+++||++|||+|+.|++.|.++.+...+.+||.+|+.+.+.
T Consensus       161 ----------------------~g~~~Ry~g~~~Af~~I~r~eGvrGLWkG~~Pn~qRaalvn~~el~tYD~~K~~li~~  218 (317)
T KOG0753|consen  161 ----------------------QGEPPRYSGTLNAFRTIYRTEGVRGLWKGVVPNIQRAALVNCGELVTYDIVKHTLIDN  218 (317)
T ss_pred             ----------------------cCCCCccccHHHHHHHHHHhcCcceeeeccchhHHHHHHHhccchhHHHHHHHHHHhc
Confidence                                  1233489999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhhcccccCcccccccHHHHh
Q 022574          185 TTGNAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILW  264 (295)
Q Consensus       185 ~~~~~~~~~~~~~~~ag~~ag~~~~~v~~P~dvvktR~q~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~G~~gLy  264 (295)
                      ....+   +...+++++++||+++++++.|.||||||||.+... ++..|++..+|+.+++++|          |+..||
T Consensus       219 ~~l~D---n~~~HfvSs~~AGl~aai~s~P~DVVKTRmMNqp~g-~~~~Ykgs~DC~~k~v~~E----------G~~AlY  284 (317)
T KOG0753|consen  219 LDLED---NIPTHFVSSFCAGLAAAILSSPVDVVKTRMMNQPPG-RGGLYKGSLDCLIKTVKNE----------GFFALY  284 (317)
T ss_pred             ccccc---chHHHHHHHHHHHHHHHHhcCcHHHHHhhhccCCCC-cCccccchHHHHHHHHHhc----------ChHHHH
Confidence            65443   378899999999999999999999999999999873 3458999999999999999          999999


Q ss_pred             hhhHHHHHhhhhhhhhHHHhhHHhhhcCC
Q 022574          265 TGVGAQLARDVPFSAICWSTLEPEKYSFP  293 (295)
Q Consensus       265 rG~~~~~~r~~~~~~i~f~~ye~~k~~l~  293 (295)
                      |||.|+++|..|.+.++|.+||.+|++..
T Consensus       285 KGF~Psw~RlGpWnvifwvtyEQlrr~~g  313 (317)
T KOG0753|consen  285 KGFIPSWLRLGPWNVIFWVTYEQLRRLLG  313 (317)
T ss_pred             ccccccceecCCeeeeeeeeHHHHHHHhc
Confidence            99999999999999999999999999864



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 5e-05
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 131 NRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAP 190 +YKG +D ++ +++GF WRG A++ PT + D ++ + + Sbjct: 48 KQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQ 107 Query: 191 MLTPYVP-LVAGSVARSLACISCYPIELARTRMQA 224 + L +G A + + YP++ ARTR+ A Sbjct: 108 FWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAA 142

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-26
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-19
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-11
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-07
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-24
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-24
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-11
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  103 bits (260), Expect = 3e-26
 Identities = 35/246 (14%), Positives = 76/246 (30%), Gaps = 54/246 (21%)

Query: 41  EALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTA 100
           ++++          G   R  + +    ++  +  P DV K R QAQA            
Sbjct: 89  DSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQAR----------- 137

Query: 101 SFESNMMLSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASL 160
                                     A    RY+ T++ +  + R+EG   LW+GT  ++
Sbjct: 138 --------------------------AGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNV 171

Query: 161 ALSVPTVGIYLPCYDGFRNLMENFTTGNAPMLTPYVPLVAGSVARSLACISCYPIELART 220
           A +       L  YD  ++ +         +        +   A     +   P+++ +T
Sbjct: 172 ARNAIVNCAELVTYDLIKDTLLKANLMTDDLPC---HFTSAFGAGFCTTVIASPVDVVKT 228

Query: 221 RMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAI 280
           R        +  +        + ++          + +  R  + G      R   ++ +
Sbjct: 229 RYM----NSALGQYHSAGHCALTML----------RKEGPRAFYKGFMPSFLRLGSWNVV 274

Query: 281 CWSTLE 286
            + T E
Sbjct: 275 MFVTYE 280


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query295
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=2.9e-38  Score=286.09  Aligned_cols=208  Identities=20%  Similarity=0.247  Sum_probs=179.8

Q ss_pred             cccccccccccccccccCCCcCCCCCCCHHHHHHHHhHHHHHHHHHhccHHHHHHHHHhhccCCCCCCcccccccccchh
Q 022574           28 SSVTVSSETSSKEEALRHSEAINDFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMM  107 (295)
Q Consensus        28 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vKtr~Q~~~~~~~~~~~~~~~~~~~~~~  107 (295)
                      .++.+..||..++...+..+     ..+....+++|++||+++.++++|+|+||+|+|++...                 
T Consensus        81 ~~i~f~~ye~~k~~~~~~~~-----~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~-----------------  138 (303)
T 2lck_A           81 ASVRIGLYDSVKQFYTKGSE-----HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA-----------------  138 (303)
T ss_dssp             HHHTTTHHHHHHHHHSCCCS-----SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC-----------------
T ss_pred             HHHHHHHHHHHHHHHhcCCc-----CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc-----------------
Confidence            45566678877654433211     36789999999999999999999999999999998621                 


Q ss_pred             hhccCCCCCCcCCCCCCCCCCCccCCCchhHHHHHHHhhhchhhhccccchhhhhhcccceeehhHHHHHHHHHhhhcCC
Q 022574          108 LSDMRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTG  187 (295)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gLyrG~~~~l~~~~~~~~~~f~~y~~~k~~l~~~~~~  187 (295)
                                          .....|+++++++++|+++||++|||||+.|++++.++..+++|.+||.+|+.+.+....
T Consensus       139 --------------------~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~  198 (303)
T 2lck_A          139 --------------------GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLM  198 (303)
T ss_dssp             --------------------CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSC
T ss_pred             --------------------CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence                                112268899999999999999999999999999999999999999999999988654322


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcccCCCCCCCCCHHHHHHHHhhcccccCcccccccHHHHhhhh
Q 022574          188 NAPMLTPYVPLVAGSVARSLACISCYPIELARTRMQAFTETQSGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGV  267 (295)
Q Consensus       188 ~~~~~~~~~~~~ag~~ag~~~~~v~~P~dvvktR~q~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~G~~gLyrG~  267 (295)
                         .......+++|++||++++++++|+|+||||||.+..    ..|.+.++|+++|+++|          |++|||||+
T Consensus       199 ---~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~----~~y~~~~~~~~~i~~~e----------G~~glyrG~  261 (303)
T 2lck_A          199 ---TDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL----GQYHSAGHCALTMLRKE----------GPRAFYKGF  261 (303)
T ss_dssp             ---CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS----SSCCSHHHHHHHHHHSS----------CTHHHHSCC
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc----cccCCHHHHHHHHHHHc----------ChHHhhccH
Confidence               2346788999999999999999999999999999863    36899999999999999          999999999


Q ss_pred             HHHHHhhhhhhhhHHHhhHHhhhcCCC
Q 022574          268 GAQLARDVPFSAICWSTLEPEKYSFPG  294 (295)
Q Consensus       268 ~~~~~r~~~~~~i~f~~ye~~k~~l~~  294 (295)
                      .++++|.+|..+++|.+||.+|+.+.+
T Consensus       262 ~~~~~r~~p~~~i~f~~ye~~k~~l~~  288 (303)
T 2lck_A          262 MPSFLRLGSWNVVMFVTYEQLKRALMA  288 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999998763



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 295
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-12
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-05
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 62.4 bits (150), Expect = 8e-12
 Identities = 42/234 (17%), Positives = 79/234 (33%), Gaps = 44/234 (18%)

Query: 51  DFSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSD 110
           D +L F +   +   AA +S   V P++  K  LQ Q                       
Sbjct: 1   DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQ----------------------- 37

Query: 111 MRNSPSCTCAVPGTEPAPECNRYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIY 170
                        ++      +YKG +D   ++ +++GF   WRG  A++    PT  + 
Sbjct: 38  -----------HASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALN 86

Query: 171 LPCYDGFRNLMENFTTGNAPMLTPYV-PLVAGSVARSLACISCYPIELARTRMQAFTETQ 229
               D ++ +       +      +   L +G  A + +    YP++ ARTR+ A     
Sbjct: 87  FAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV--- 143

Query: 230 SGVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWS 283
                    +   G+ N +       K    R L+ G    +   + + A  + 
Sbjct: 144 ---GKGAAQREFTGLGNCITKI---FKSDGLRGLYQGFNVSVQGIIIYRAAYFG 191


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query295
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.2e-33  Score=251.22  Aligned_cols=199  Identities=21%  Similarity=0.336  Sum_probs=173.5

Q ss_pred             CCCCHHHHHHHHhHHHHHHHHHhccHHHHHHHHHhhccCCCCCCcccccccccchhhhccCCCCCCcCCCCCCCCCCCcc
Q 022574           52 FSLGFAERAFSAAGAAIVSAVIVNPLDVAKTRLQAQAAGVPYEGLCRTASFESNMMLSDMRNSPSCTCAVPGTEPAPECN  131 (295)
Q Consensus        52 ~~~~~~~~~~ag~~ag~~~~~~~~Pld~vKtr~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (295)
                      +..++++.++||++|++++.+++||||+||+|+|++.....                                  .....
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~----------------------------------~~~~~   47 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ----------------------------------ISAEK   47 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS----------------------------------CCGGG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCC----------------------------------CCccc
Confidence            34689999999999999999999999999999999874221                                  22234


Q ss_pred             CCCchhHHHHHHHhhhchhhhccccchhhhhhcccceeehhHHHHHHHHHhhhcCCCCCCC-CchHHHHHHHHHHHHHHH
Q 022574          132 RYKGTLDLFYKVVRQEGFARLWRGTYASLALSVPTVGIYLPCYDGFRNLMENFTTGNAPML-TPYVPLVAGSVARSLACI  210 (295)
Q Consensus       132 ~~~~~~~~~~~i~~~~G~~gLyrG~~~~l~~~~~~~~~~f~~y~~~k~~l~~~~~~~~~~~-~~~~~~~ag~~ag~~~~~  210 (295)
                      .++++++++++++++||+++||+|+.+.+++..+..+++|.+|+.+++.+.+......+.. ....++++|.+||+++.+
T Consensus        48 ~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  127 (292)
T d1okca_          48 QYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLC  127 (292)
T ss_dssp             SCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHh
Confidence            7889999999999999999999999999999999999999999999999988765433221 235678899999999999


Q ss_pred             HHhhHHHHHHHHhhcccCCC-CCCCCCHHHHHHHHhhcccccCcccccccHHHHhhhhHHHHHhhhhhhhhHHHhhHHhh
Q 022574          211 SCYPIELARTRMQAFTETQS-GVKPPGVWKTLVGVVNPLKSRNSSQKLQNYRILWTGVGAQLARDVPFSAICWSTLEPEK  289 (295)
Q Consensus       211 v~~P~dvvktR~q~~~~~~~-~~~~~~~~~~~~~i~~~e~~~~~~~~~~G~~gLyrG~~~~~~r~~~~~~i~f~~ye~~k  289 (295)
                      +++|+|++|+|+|.+..... .+.|.+..+++++++++|          |+++||+|+.++++|.+|+.+++|.+||.+|
T Consensus       128 ~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k  197 (292)
T d1okca_         128 FVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSD----------GLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK  197 (292)
T ss_dssp             HHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHH----------CHHHHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhheeeeccccccccccccccHHHHHHHhhhcc----------chhhhhccccccccceehHhhhhhhhccchh
Confidence            99999999999999875432 346789999999999999          9999999999999999999999999999999


Q ss_pred             hcCCC
Q 022574          290 YSFPG  294 (295)
Q Consensus       290 ~~l~~  294 (295)
                      +.+.+
T Consensus       198 ~~~~~  202 (292)
T d1okca_         198 GMLPD  202 (292)
T ss_dssp             HSSCG
T ss_pred             hhccc
Confidence            87753



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure