Citrus Sinensis ID: 022578
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 295 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SA52 | 378 | Chloroplast stem-loop bin | yes | no | 0.871 | 0.679 | 0.807 | 1e-126 | |
| Q9LYA9 | 406 | Chloroplast stem-loop bin | no | no | 0.840 | 0.610 | 0.326 | 2e-34 | |
| Q45291 | 329 | UDP-glucose 4-epimerase O | no | no | 0.742 | 0.665 | 0.254 | 3e-05 | |
| P55579 | 396 | Uncharacterized protein y | yes | no | 0.738 | 0.550 | 0.228 | 0.0004 |
| >sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/260 (80%), Positives = 234/260 (90%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK G F
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGG---FP 295
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 296 EPEIVHYNPKEFDFGKKKAF 315
|
Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1 | Back alignment and function description |
|---|
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
GG IG + ++ L+ GH VT+ T G ++++ F+E S + G+ +
Sbjct: 90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
V + + + FDVV D NG++ D V P++D + ++QF++ SSAG+Y ++ PH
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
E D V + H + E L NW S RP Y+ G N EEWFF R+ R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262
Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237
IPGSG+Q+T + HV+DL+ + N E AS +FN ++ VT DG+A+ CA G
Sbjct: 263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-- 320
Query: 238 DFRSLNLCTTTPKSLTLVKRRLF 260
+++ + PK++ + ++ F
Sbjct: 321 --KTVEIVHYDPKAIGVDAKKAF 341
|
Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=galE PE=3 SV=2 | Back alignment and function description |
|---|
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 112/275 (40%), Gaps = 56/275 (20%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG ++G + +L++ GH VT+ + +P ++ ++GD
Sbjct: 7 GGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARL-----------IEGDVN-- 53
Query: 62 DFVKSSLSAKGFDVVYDINGRE--ADEVE--------------PILDAL--PNLEQFIYC 103
D V+ LS GF+ V R + VE +LDA+ + ++
Sbjct: 54 DVVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVFS 113
Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRHKG-KLNTESVLESK----GVNWTSLRPVYI---Y 155
S+A Y + D++P E P + + KL+ + + S G+ TSLR + Y
Sbjct: 114 STAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAY 173
Query: 156 GPLNYN-PVEEWFF---------HRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
G + N VE HR K G P P G V H+ DLA+A V
Sbjct: 174 GNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAKAHVLA 232
Query: 203 L-GNEKASRQVFNI-SGEKYVTFDGLARACAKVTG 235
L NE ++FN+ SG+ Y + + C +VTG
Sbjct: 233 LESNEAGKHRIFNLGSGDGY-SVKQVVEMCREVTG 266
|
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P55579|Y4NG_RHISN Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234) GN=NGR_a02350 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 27/245 (11%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILH-------L 54
GG+ + G LS+ L+++G V +F PG S IL L
Sbjct: 56 GGSGYFGELLSKQLLRQGTYVRVFDLNP-------PGFSHPNLEFLKGTILDRNAVRQAL 108
Query: 55 KGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILD--ALPNLEQFIYCSSAGVYLKS 112
G K + V AK D+ + +N + I+D +E+F+Y SS+ V+
Sbjct: 109 SGIDKVFHNVAQVPLAKEKDLFWSVN---CGGTQIIVDESVATGIEKFVYTSSSAVFGAP 165
Query: 113 DLLPHCETDTVDP-----KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
P E +P +++ G++ + ++ G++ +RP + G V +
Sbjct: 166 KSNPVTEETEPNPAEDYGRAKLAGEIICKEAMQRDGLDVAIVRPRTVLG-YGRQGVVQIL 224
Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA 227
F ++ G IP+ G G Q H DLA A + + +NI ++ T L
Sbjct: 225 FDWVERGLDIPVLGGGNNKYQFVHSDDLASACIAA--SNVKGFATYNIGAAEFGTMRELL 282
Query: 228 RACAK 232
+ K
Sbjct: 283 QVVIK 287
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Putative nucleotide sugar epimerase/dehydrogenase. Rhizobium sp. (strain NGR234) (taxid: 394) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 295 | ||||||
| 363806740 | 378 | uncharacterized protein LOC100791076 [Gl | 0.871 | 0.679 | 0.826 | 1e-126 | |
| 255542956 | 381 | NAD dependent epimerase/dehydratase, put | 0.871 | 0.674 | 0.838 | 1e-126 | |
| 356572914 | 378 | PREDICTED: uncharacterized protein At1g0 | 0.871 | 0.679 | 0.826 | 1e-125 | |
| 312282041 | 379 | unnamed protein product [Thellungiella h | 0.871 | 0.678 | 0.815 | 1e-125 | |
| 388497252 | 378 | unknown [Medicago truncatula] | 0.871 | 0.679 | 0.830 | 1e-125 | |
| 118489564 | 380 | unknown [Populus trichocarpa x Populus d | 0.871 | 0.676 | 0.823 | 1e-124 | |
| 388512335 | 378 | unknown [Medicago truncatula] | 0.871 | 0.679 | 0.826 | 1e-124 | |
| 15217485 | 378 | RNA binding protein [Arabidopsis thalian | 0.871 | 0.679 | 0.807 | 1e-124 | |
| 3850621 | 374 | putative RNA binding protein [Arabidopsi | 0.871 | 0.687 | 0.807 | 1e-124 | |
| 224124986 | 380 | predicted protein [Populus trichocarpa] | 0.871 | 0.676 | 0.823 | 1e-123 |
| >gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max] gi|255647108|gb|ACU24022.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/260 (82%), Positives = 235/260 (90%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
+DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L++KGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
GSGIQ+TQLGHVKDLA+AF+QV GNEKAS++VFNISG+K+VTFDGLARACAK G F
Sbjct: 239 GSGIQITQLGHVKDLAKAFIQVFGNEKASKEVFNISGDKHVTFDGLARACAKAGG---FP 295
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 296 EPEIIHYNPKDFDFGKKKSF 315
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/260 (83%), Positives = 233/260 (89%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q+LPGESDQ++A+FSSK+LHLKGDRKD
Sbjct: 61 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKD 120
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
+DFVKSSLSAKGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLKSDLLPH E
Sbjct: 121 FDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEK 180
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+LES GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLARACAK G F
Sbjct: 241 NSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGG---FP 297
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 298 EPEIVHYNPKEFDFGKKKAF 317
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/260 (82%), Positives = 234/260 (90%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
+DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+++GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
SG+Q+TQLGHVKDLA AF+QVLGNEKAS++VFNISGEKYVTFDGLARACAK G F
Sbjct: 239 SSGLQITQLGHVKDLATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGG---FP 295
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 296 EPEIIHYNPKDFDFGKKKSF 315
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/260 (81%), Positives = 234/260 (90%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEV 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKY+TFDGLARACAK G F
Sbjct: 239 NSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGG---FP 295
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 296 EPEIVHYNPKEFDFGKKKAF 315
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/260 (83%), Positives = 232/260 (89%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARACAK G F
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACAKAGG---FP 295
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 296 EPEIIHYNPKDFDFGKKKSF 315
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
|---|
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/260 (82%), Positives = 233/260 (89%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI QQLPGESDQ++++FSSKILHLKGDRKD
Sbjct: 60 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKD 119
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK G F
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAG---FP 296
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 297 EPEIVHYNPKDFDFGKKKAF 316
|
Source: Populus trichocarpa x Populus deltoides Species: Populus trichocarpa x Populus deltoides Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/260 (82%), Positives = 231/260 (88%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARAC K G F
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACVKAGG---FP 295
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 296 EPEIIHYNPKDFDFGKKKSF 315
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic; Short=CSP41-b; AltName: Full=Heteroglycan-interacting protein 1.3; AltName: Full=Protein CHLOROPLAST RNA BINDING; AltName: Full=Protein Gb5f; Flags: Precursor gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana] gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767 come from this gene [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana] gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/260 (80%), Positives = 234/260 (90%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK G F
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGG---FP 295
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 296 EPEIVHYNPKEFDFGKKKAF 315
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3850621|emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/260 (80%), Positives = 234/260 (90%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 55 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 114
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 115 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 174
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 175 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 234
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK G F
Sbjct: 235 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGG---FP 291
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 292 EPEIVHYNPKEFDFGKKKAF 311
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/260 (82%), Positives = 232/260 (89%), Gaps = 3/260 (1%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK G F
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAG---FP 296
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 297 EPEIVHYNPKDFDFGKKKAF 316
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 295 | ||||||
| TAIR|locus:2203028 | 378 | CRB "chloroplast RNA binding" | 0.871 | 0.679 | 0.807 | 5.8e-114 | |
| TAIR|locus:2099222 | 406 | CSP41A "AT3G63140" [Arabidopsi | 0.840 | 0.610 | 0.326 | 2.5e-33 | |
| TIGR_CMR|GSU_0385 | 294 | GSU_0385 "NADH dehydrogenase s | 0.352 | 0.353 | 0.268 | 2.3e-05 | |
| TAIR|locus:2025192 | 310 | AT1G75280 [Arabidopsis thalian | 0.450 | 0.429 | 0.287 | 8.3e-05 | |
| UNIPROTKB|Q71YS4 | 291 | LMOf2365_1769 "Putative unchar | 0.742 | 0.752 | 0.257 | 0.00027 | |
| UNIPROTKB|Q81JK7 | 292 | BA_5697 "Uncharacterized prote | 0.325 | 0.328 | 0.318 | 0.00027 | |
| TIGR_CMR|BA_5697 | 292 | BA_5697 "conserved hypothetica | 0.325 | 0.328 | 0.318 | 0.00027 | |
| UNIPROTKB|Q83DM2 | 301 | CBU_0681 "NAD dependent epimer | 0.447 | 0.438 | 0.290 | 0.00049 | |
| TIGR_CMR|CBU_0681 | 301 | CBU_0681 "conserved hypothetic | 0.447 | 0.438 | 0.290 | 0.00049 | |
| TAIR|locus:2025197 | 318 | AT1G75290 [Arabidopsis thalian | 0.596 | 0.553 | 0.266 | 0.00054 |
| TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 210/260 (80%), Positives = 234/260 (90%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFR 240
SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK G F
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGG---FP 295
Query: 241 SLNLCTTTPKSLTLVKRRLF 260
+ PK K++ F
Sbjct: 296 EPEIVHYNPKEFDFGKKKAF 315
|
|
| TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 86/263 (32%), Positives = 139/263 (52%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
GG IG + ++ L+ GH VT+ T G ++++ F+E S + G+ +
Sbjct: 90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
V + + + FDVV D NG++ D V P++D + ++QF++ SSAG+Y ++ PH
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
E D V + H + E L NW S RP Y+ G N EEWFF R+ R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262
Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237
IPGSG+Q+T + HV+DL+ + N E AS +FN ++ VT DG+A+ CA G
Sbjct: 263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-- 320
Query: 238 DFRSLNLCTTTPKSLTLVKRRLF 260
+++ + PK++ + ++ F
Sbjct: 321 --KTVEIVHYDPKAIGVDAKKAF 341
|
|
| TIGR_CMR|GSU_0385 GSU_0385 "NADH dehydrogenase subunit, putative" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 108 (43.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/108 (26%), Positives = 47/108 (43%)
Query: 129 HKGKLNTESVLESKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVT 187
H+ K E V+ ++WT RP I+GP + + F R A +P+ G G
Sbjct: 122 HRTKWRAEEVVRQSELDWTIFRPSLIFGPKGAFVDMLAGFVRRFPA---VPVVGDGTYRL 178
Query: 188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
Q V D+AR F L + Q + + G +T++ + +V G
Sbjct: 179 QPVSVDDVARCFALALDMPETFGQTYELCGPDRLTYNEVLDIIGRVLG 226
|
|
| TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 120 (47.3 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 44/153 (28%), Positives = 75/153 (49%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT +IG FL K GH R +A ++ + G++ Q F + ILH GD D
Sbjct: 11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYLKSDLL 115
++ + ++ K DVV G + D+ + I+ A+ N+++F+ S GV +
Sbjct: 68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVD---- 119
Query: 116 PHCETDTVDP-KSRHKGKLNTESVLESKGVNWT 147
T V+P KS GK+ +E++G+ +T
Sbjct: 120 ---RTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149
|
|
| UNIPROTKB|Q71YS4 LMOf2365_1769 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] | Back alignment and assigned GO terms |
|---|
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 64/249 (25%), Positives = 107/249 (42%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGTRF G L LV EGH+VT+ TRGK ++ F + +++ L + +D
Sbjct: 7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY-------LKSD 113
F L+ + +DV+YD E +DA ++++IY SS VY +++D
Sbjct: 56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYSQKGRALVEAD 112
Query: 114 LLP-HCETDTVDPKSRH--KGKLNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFH 169
P H E D + +GK E+V K ++R + G +Y + +
Sbjct: 113 FNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGLDDYTKRLHFHIN 172
Query: 170 RLKAGRPIPIPGSGIQVTQLGHV-KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
+K + I I S Q ++G + D A F++ +G E N + +G +
Sbjct: 173 HIKNHQEIGI--SNGQA-EIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIK 229
Query: 229 ACAKVTGLL 237
+ G L
Sbjct: 230 MLEEKIGKL 238
|
|
| UNIPROTKB|Q81JK7 BA_5697 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
|
|
| TIGR_CMR|BA_5697 BA_5697 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
|
|
| UNIPROTKB|Q83DM2 CBU_0681 "NAD dependent epimerase/dehydratase family" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 43/148 (29%), Positives = 67/148 (45%)
Query: 97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
++Q IY SS VY SD P ET P S H ++ +SV ++ LRP
Sbjct: 101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159
Query: 152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
+YG P N Y P F RL I + G G + ++ D+A +V+ +
Sbjct: 160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214
Query: 207 KASRQVFNISGEKYVTFDGLARACAKVT 234
+ SR V NI+ + ++F LA +++
Sbjct: 215 RCSRGVLNIATGQVISFKQLAEKVVQLS 242
|
|
| TIGR_CMR|CBU_0681 CBU_0681 "conserved hypothetical protein" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 43/148 (29%), Positives = 67/148 (45%)
Query: 97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
++Q IY SS VY SD P ET P S H ++ +SV ++ LRP
Sbjct: 101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159
Query: 152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
+YG P N Y P F RL I + G G + ++ D+A +V+ +
Sbjct: 160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214
Query: 207 KASRQVFNISGEKYVTFDGLARACAKVT 234
+ SR V NI+ + ++F LA +++
Sbjct: 215 RCSRGVLNIATGQVISFKQLAEKVVQLS 242
|
|
| TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 113 (44.8 bits), Expect = 0.00054, P = 0.00054
Identities = 52/195 (26%), Positives = 85/195 (43%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT IG + VK GH R +A ++ G++ Q F +F +LH GD D
Sbjct: 11 IGGTGHIGKLIIEASVKAGHSTLALVR-EASLSDPNKGKTVQNFKDFGVTLLH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDL-LPHCE 119
++ + ++ K DVV G ILD + + +L S+ + +
Sbjct: 68 HESLVKAI--KQADVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120
Query: 120 TDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
+ V+P KS KL T +E++G+ +T L Y G Y P +L+ G P
Sbjct: 121 SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAG--YYLPT----LVQLEPGLTSP 174
Query: 179 IPGSGIQVTQLGHVK 193
P +++ G+VK
Sbjct: 175 -PRDKVKIFGDGNVK 188
|
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SA52 | CP41B_ARATH | No assigned EC number | 0.8076 | 0.8711 | 0.6798 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | CRB | CRB (CHLOROPLAST RNA BINDING); binding / catalytic/ coenzyme binding; Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes. (378 aa) | |||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | CSP41A | CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding; Encod [...] (406 aa) | • | • | • | • | • | 0.991 | |||
 | SBPASE | SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase [...] (393 aa) | • | • | 0.950 | ||||||
 | PRK | PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding; PHOSPHORIBULOKIN [...] (395 aa) | • | • | 0.948 | ||||||
 | AT3G47070 | unknown protein; unknown protein; LOCATED IN- thylakoid, chloroplast thylakoid membrane, chloro [...] (100 aa) | • | 0.936 | |||||||
 | TRXF1 | TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator; THIOREDOXIN F-TYPE 1 (TRXF1); FUNCTIONS IN- enz [...] (178 aa) | • | 0.936 | |||||||
 | AT1G55480 | binding / protein binding; binding / protein binding; FUNCTIONS IN- protein binding, binding; L [...] (335 aa) | • | 0.936 | |||||||
 | PETC | PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C); electron transporter, transferring electrons from cy [...] (229 aa) | • | 0.935 | |||||||
 | FBP | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putativ [...] (417 aa) | • | 0.935 | |||||||
 | NPQ4 | NPQ4 (NONPHOTOCHEMICAL QUENCHING); chlorophyll binding / xanthophyll binding; Encoding PSII-S ( [...] (265 aa) | • | • | 0.934 | ||||||
 | FNR1 | FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1); NADPH dehydrogenase/ electron transporter, transfer [...] (360 aa) | • | 0.933 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 295 | |||
| PLN00016 | 378 | PLN00016, PLN00016, RNA-binding protein; Provision | 1e-144 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 2e-93 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 1e-23 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 2e-22 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 9e-20 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 2e-17 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 3e-15 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 1e-14 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 1e-11 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 4e-10 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 4e-10 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 6e-10 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 6e-10 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 6e-09 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 7e-09 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 9e-09 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 5e-08 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 8e-08 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 2e-07 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 2e-07 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 4e-07 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 1e-06 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 2e-06 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 2e-05 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 5e-05 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 6e-05 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 6e-05 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 8e-05 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 3e-04 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 4e-04 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 6e-04 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 7e-04 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 0.001 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 0.002 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 0.002 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 0.002 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 0.002 | |
| TIGR01777 | 291 | TIGR01777, yfcH, TIGR01777 family protein | 0.003 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 0.003 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 0.003 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 0.003 |
| >gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Score = 409 bits (1054), Expect = e-144
Identities = 135/238 (56%), Positives = 165/238 (69%), Gaps = 10/238 (4%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
GG FIG +L++ LVK GH+VTLFTRGK P +Q++ E F+E SS + + GD D
Sbjct: 63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWGDPAD 121
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHC 118
VKS ++ GFDVVYD NG++ DEVEP+ D P L+QF++CSSAGVY KSD PH
Sbjct: 122 ---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHV 178
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
E D V PK+ G L E+ L+ GVNWTS RP YIYGP N EEWFF RL GRP+P
Sbjct: 179 EGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVP 235
Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236
IPGSGIQ+TQLGHVKDLA F V+GN KA+ Q+FNI ++ VTFDG+A+ACAK G
Sbjct: 236 IPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGF 293
|
Length = 378 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 276 bits (708), Expect = 2e-93
Identities = 99/245 (40%), Positives = 127/245 (51%), Gaps = 23/245 (9%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRFIG L L+ GH VT+F RG+ + H+ GDR D
Sbjct: 6 IGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD-------------LPEGVEHIVGDRND 52
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL-PNLEQFIYCSSAGVYLKS-----DL 114
D ++ L + FDVV D +VE LDA ++Q+I+ SSA VYLK +
Sbjct: 53 RDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQYIFISSASVYLKPGRVITES 112
Query: 115 LPHCETDTV---DPKSRHKGKLNTESVLESK-GVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
P E D V DP +GK E VL +T +RP YIYGP +Y +FF R
Sbjct: 113 TPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDR 172
Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
L GRPI +PG G + Q HVKDLARA + GN KA +FNI+G++ VT+D L AC
Sbjct: 173 LARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEAC 232
Query: 231 AKVTG 235
AK G
Sbjct: 233 AKALG 237
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 98.1 bits (244), Expect = 1e-23
Identities = 62/268 (23%), Positives = 88/268 (32%), Gaps = 47/268 (17%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
GG FIG L L+ GH V R + + L G D D
Sbjct: 6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVV------------LDLTD 53
Query: 61 YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
D V D V + +++ +P N+ ++F+
Sbjct: 54 RDLVDELAKGVP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112
Query: 102 YCSSAGVYLKSDLLPHCETDTVDPKSR---HKGKLNTESVLES----KGVNWTSLRPVYI 154
+ SS V + D P+ KL E +L + G+ LRP +
Sbjct: 113 FASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172
Query: 155 YGPLNYNPVEEWFFHRL-----KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
YGP + + K I I G G Q +V D+A A + L E
Sbjct: 173 YGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL--ENPD 230
Query: 210 RQVFNI-SGEKYVTFDGLARACAKVTGL 236
VFNI SG +T LA A A+ G
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGS 258
|
Length = 314 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 2e-22
Identities = 60/225 (26%), Positives = 85/225 (37%), Gaps = 39/225 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG FIG L R L++ GH+V + R ++HL
Sbjct: 5 GGAGFIGSHLVRRLLERGHEVVVIDRLDV--------------------VVHLAALVGV- 43
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE 119
S D ++ N +L+A +++F+Y SSA VY + LP E
Sbjct: 44 -----PASWDNPDEDFETN---VVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEE 95
Query: 120 TDTVDPKS-RHKGKLNTESVLES----KGVNWTSLRPVYIYGP---LNYNPVEEWFFHRL 171
P S KL E +L S G+ LR +YGP + V F R
Sbjct: 96 ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRA 155
Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
G+P+ + G G Q HV D+ RA + L N V+NI
Sbjct: 156 LEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 9e-20
Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 40/241 (16%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGT FIG L R L++EG++V + R + + I +GD D
Sbjct: 5 GGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------IRFHEGDLTDP 52
Query: 62 DFVKSSLSAKGFDVVY--------DINGREADE--------VEPILDALP--NLEQFIYC 103
D ++ L+ D V + + + +L+A +++F++
Sbjct: 53 DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112
Query: 104 SSAGVYLKSDLLPHCETDTVDPKS---RHK--GKLNTESVLESKGVNWTSLRPVYIYGPL 158
SS+ VY P E + P S K + E+ + G+ LR +YGP
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172
Query: 159 NYNPVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
N +P R+ G+PI + G G Q +V D+ARA + L + ++N
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGE-IYN 231
Query: 215 I 215
I
Sbjct: 232 I 232
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 2e-17
Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 48/250 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG FIG L L++EG QV +F R P L G ++ KGD ++
Sbjct: 6 GGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG------VDYI------KGDYENR 53
Query: 62 DFVKSSLSAKG--FDVVYDINGREADEVEPILDALPNL---------------EQFIYCS 104
++S+L + N + PILD N+ + I+ S
Sbjct: 54 ADLESALVGIDTVIHLASTTNPATS-NKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112
Query: 105 SAG-VYLKSDLLPHCETDTVDPKSRHK-GKLNTESVLE----SKGVNWTSLRPVYIYGPL 158
S G VY + LP E+D P S + KL E L G+++T LR YGP
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPG 172
Query: 159 NYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211
P+ +++ G PI I G G + ++ DL A + +L ++
Sbjct: 173 QRPDGKQGVIPI---ALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLEE- 228
Query: 212 VFNI-SGEKY 220
VFNI SG Y
Sbjct: 229 VFNIGSGIGY 238
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 3e-15
Identities = 61/218 (27%), Positives = 83/218 (38%), Gaps = 27/218 (12%)
Query: 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
++G L+R L+ +G QVT TR +A P A+ L G D D +
Sbjct: 8 YLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAAD-----LTQPGLLADVDHLV 62
Query: 66 SSLSAKGFDVVYDINGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPHC-ETD 121
SL G + +LDAL P +++ IY SS GVY D +
Sbjct: 63 ISLPPPA----GSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVY--GDQQGEWVDET 116
Query: 122 TVDPKSRHKGK--LNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
+ S G+ L E L + G T LR IYGP +P+ RL G
Sbjct: 117 SPPNPSTESGRALLEAEQALLALGSKPTTILRLAGIYGP-GRHPLR-----RLAQG--TG 168
Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
P +G T HV DL A L V+N+
Sbjct: 169 RPPAGNAPTNRIHVDDLVGALAFALQRPAPGP-VYNVV 205
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 1e-14
Identities = 62/278 (22%), Positives = 104/278 (37%), Gaps = 52/278 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKD 60
G T FIG ++ L K G QV + R +A + L G+ Q +L ++ D +D
Sbjct: 7 GATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQ--------VLFVEFDLRD 58
Query: 61 YDFVKSSLSAKGFDVVYDINGRE----ADEVEPILDALP----------NLEQFIYCSSA 106
+ ++ +L +G DVV ++ GR E + P +E+ I+ S+
Sbjct: 59 DESIRKAL--EGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISAL 116
Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEW 166
G D P + K E + T +RP ++G +
Sbjct: 117 GA------------DANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDR------ 158
Query: 167 FFHRLKAGR---P-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
F +R P P+ G G Q +V D+A A + L + + + + + G K T
Sbjct: 159 FLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYT 218
Query: 223 FDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLF 260
L ++ G R L L P L + R+
Sbjct: 219 LAELVELLRRLGG-RKRRVLPL----PLWLARLIARVK 251
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 1e-11
Identities = 44/208 (21%), Positives = 72/208 (34%), Gaps = 38/208 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G L + L+ GHQVT +R + + + ++ D D
Sbjct: 5 GATGKTGRRLVKELLARGHQVTALSRNPSKAP--------------APGVTPVQKDLFDL 50
Query: 62 DFVKSSLSAKGFDVVYD-INGREADE--VEPILDALPNL--EQFIYCSSAGVY-LKSDLL 115
+ +L G D V D R D V+ +LDA + + S+AG+Y +
Sbjct: 51 ADLAEAL--AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTF 108
Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
+ P +R K E +L + G++WT +RP ++ E
Sbjct: 109 RLDDAPLFPPYARAKAAA--EELLRASGLDWTIVRPGALFDE-EGETYEIGTEGDPAGES 165
Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVL 203
I D+A A + L
Sbjct: 166 SI-------------SRADVAAALLDEL 180
|
Length = 182 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 4e-10
Identities = 52/245 (21%), Positives = 88/245 (35%), Gaps = 48/245 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +G + LL+ + V R E + FA ++ DY
Sbjct: 5 GATGKLGTAVVELLLAKVASVVALVRN---------PEKAKAFAADGVEVRQG-----DY 50
Query: 62 DFVKSSLSA-KGFDVVY----DINGREADEVEPILDALPNLEQFIYCSSAGV----YLKS 112
D ++ A +G D + + + +DA AGV YL
Sbjct: 51 DDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDA---------AKQAGVKHIVYLS- 100
Query: 113 DLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK 172
+ D+ +R G TE LE+ G+ +T LRP + L E+ L+
Sbjct: 101 --ASGADEDSPFLLARDHGA--TEKYLEASGIPYTILRPGWFMDNLL-----EFLPSILE 151
Query: 173 AGRPIPIPGSGIQVTQLGHV--KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
G G G + V +D+A A L +V+N++G + +++ LA
Sbjct: 152 EGTIYGPAGDGK----VAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPEALSYAELAAIL 207
Query: 231 AKVTG 235
++ G
Sbjct: 208 SEALG 212
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 4e-10
Identities = 50/240 (20%), Positives = 77/240 (32%), Gaps = 33/240 (13%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
G T F+G + R L+ GH+V R A L G + + K L D
Sbjct: 7 GATGFVGGAVVRELLARGHEVRAAVRNPEA-AAALAGGVEVVLGDLRDPKSLVAGAKGVD 65
Query: 61 YDFVKSSLSAKG-----FDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 115
+ S L V + EA A ++ + S G
Sbjct: 66 GVLLISGLLDGSDAFRAVQVTAVVRAAEA--------AGAGVKHGVSLSVLGA------- 110
Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
D P + + K E+ L S G+ +T+LR Y + AG
Sbjct: 111 -----DAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIEAAEAAGL 161
Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
P+ G G V D+A A L + + + ++G + +T LA G
Sbjct: 162 PVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIG 219
|
Length = 275 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 6e-10
Identities = 62/257 (24%), Positives = 99/257 (38%), Gaps = 44/257 (17%)
Query: 2 GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
GG+ F G L + L++ G V F A + EF LKGD D
Sbjct: 6 GGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEF---------LKGDITD 56
Query: 61 YDFVKSSLSAKGFDVVYDI-------NGRE-ADEV-----EPILDALP--NLEQFIYCSS 105
+ V+ +LS G D V+ R+ EV + +LDA +++F+Y SS
Sbjct: 57 RNDVEQALS--GADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSS 114
Query: 106 AGVYLKSDL-------LPHCETDTVDPKSRHKGKLNTESVLESKGVN---WTSLRPVYIY 155
+ V LP+ D+ D + K + VLE+ G + +LRP I+
Sbjct: 115 SSVIFGGQNIHNGDETLPYPPLDS-DMYAETK-AIAEIIVLEANGRDDLLTCALRPAGIF 172
Query: 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV----LGNEKASRQ 211
GP + F + G + G G + +V +LA A + + + S Q
Sbjct: 173 GP-GDQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISGQ 231
Query: 212 VFNISGEKYVTFDGLAR 228
+ I+ + L R
Sbjct: 232 TYFITDAEPHNMFELLR 248
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 6e-10
Identities = 67/270 (24%), Positives = 100/270 (37%), Gaps = 55/270 (20%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG FIG L L++ GH+V + + GK + LP E + ++GD
Sbjct: 6 GGAGFIGSHLVERLLERGHEVIVLDNLSTGKK---ENLP--------EVKPNVKFIEGDI 54
Query: 59 KDYDFVKSSLS--------AKGFDVVYDINGREADEVEPILDALPN-------------- 96
+D + V+ + A V I +PI D N
Sbjct: 55 RDDELVEFAFEGVDYVFHQAAQASVPRSIE-------DPIKDHEVNVLGTLNLLEAARKA 107
Query: 97 -LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-GKLNTESVL----ESKGVNWTSLR 150
+++F+Y SS+ VY LP E +P S + K E G+ SLR
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLR 167
Query: 151 PVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205
+YGP Y V F R G P I G G Q +V+D+ A +
Sbjct: 168 YFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAA-T 226
Query: 206 EKASRQVFNISGEKYVTFDGLARACAKVTG 235
A +V+NI K + + LA ++ G
Sbjct: 227 AGAGGEVYNIGTGKRTSVNELAELIREILG 256
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 6e-09
Identities = 54/262 (20%), Positives = 88/262 (33%), Gaps = 60/262 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G FIG L+ L++EGH+V + + L + + F + GD +D
Sbjct: 6 GADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHF------ISGDVRDA 59
Query: 62 DFVKSSLSAKGFDVVY---------DINGREADEVEPIL--DALP-------NLEQFIYC 103
V+ + K DVV+ VE + ++ ++
Sbjct: 60 SEVEYLV--KKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHT 117
Query: 104 SSAGVYLKSDLLPHCETDTVD-------PKSRHKGKLN--TESVLESKGVNWTSLRPVYI 154
S++ VY + +P E + P S K + S S G+ T +RP
Sbjct: 118 STSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177
Query: 155 YGPLNYNPVEEWFFHRLKAGRPIPIP-------------GSGIQVTQLGHVKDLARAFVQ 201
YGP R A IP G G VKD AR F+
Sbjct: 178 YGP------------RQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFID 225
Query: 202 VLGNEKASRQVFNISGEKYVTF 223
+L +A ++ N + ++
Sbjct: 226 ILDAIEAVGEIINNGSGEEISI 247
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 7e-09
Identities = 44/231 (19%), Positives = 75/231 (32%), Gaps = 46/231 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDR 58
G T +G + R L+ G+QV R + + ++ + S L+G
Sbjct: 6 GATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEG-- 63
Query: 59 KDYDFVKSSLSAKGFDVVYDINGREADE--VEPILDALP--NLEQFIYCSSAGVY----L 110
D V S+ + G D ++DA +++F+ SS G
Sbjct: 64 --IDAVISAAGSGGKG---GPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHP 118
Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
L P+ K E L + G+++T +RP G L +P
Sbjct: 119 LEALGPY-----------LDAKRKAEDYLRASGLDYTIVRP----GGLTDDPAGTGRVVL 163
Query: 171 LKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
G + PI + D+A + L A + F + G
Sbjct: 164 GGDGTRLDGPISRA-----------DVAEVLAEALDTPAAIGKTFELGGGD 203
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 9e-09
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T FIG L+R L+++GH+VTL R + DQE +GD +D
Sbjct: 5 GATGFIGRALARELLEQGHEVTLLVRNTKR-----LSKEDQEPVAVV------EGDLRDL 53
Query: 62 DFVKSSLSAKGFDVVY-----DINGREADEVEP-----ILDALP--NLEQFIYCSSAGVY 109
D + ++ +G DVV + R+ EV+ +L+A ++ FI+ SS G Y
Sbjct: 54 DSLSDAV--QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAY 111
Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYG 156
DL E P K K TE+VL + +T +RP IYG
Sbjct: 112 --GDLHEETEPSPSSPYLAVKAK--TEAVLREASLPYTIVRPGVIYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 5e-08
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 136 ESVLESKGVNWTSLRPVYIYGP-LNYNPVEEWF-------FHRLKA--GRPIPIPGSGIQ 185
E+ + G ++ S+ P +YGP N++P FH K G+ + + GSG
Sbjct: 144 EAYRKQYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTP 203
Query: 186 VTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
+ + DLARA V +L N + N+ ++ LA A A+V G
Sbjct: 204 RREFLYSDDLARAIVFLLENY-DEPIIVNVGSGVEISIRELAEAIAEVVG 252
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 8e-08
Identities = 56/266 (21%), Positives = 98/266 (36%), Gaps = 56/266 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T F+G L R L+ +G++V R + A L G E E GD D
Sbjct: 5 GATGFLGSNLVRALLAQGYRVRALVRSGSD-AVLLDGL-PVEVVE---------GDLTDA 53
Query: 62 DFVKSSLSAKGFDVVY------DINGREADEVEPI-LDALPNL---------EQFIYCSS 105
+ +++ KG D V+ + ++ E+ ++ N+ + ++ SS
Sbjct: 54 ASLAAAM--KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111
Query: 106 AGVY------LKSDLLPHCETDTVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGP 157
+ P E + R K L VLE ++G++ + P ++GP
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSK-LLAELEVLEAAAEGLDVVIVNPSAVFGP 170
Query: 158 LNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
+ P +P P G V+D+A + + EK R
Sbjct: 171 GDEGPTSTGLDVLDYLNGKLPAYPPGGTSFV---DVRDVAEGHIAAM--EKGRR------ 219
Query: 217 GEKY------VTFDGLARACAKVTGL 236
GE+Y ++F L A++TG+
Sbjct: 220 GERYILGGENLSFKQLFETLAEITGV 245
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 52/255 (20%), Positives = 88/255 (34%), Gaps = 39/255 (15%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
G T FIG + R LV GH+V R SD A+ + +GD +D
Sbjct: 7 GATGFIGSAVVRELVAAGHEVVGLAR------------SDAGAAKLEAAGAQVHRGDLED 54
Query: 61 YDFVKSSLSAK------GFDVVYDINGREADE----VEPILDALPNLEQ-FIYCSSAGVY 109
D ++ + + F +D + + +E + +AL + IY S +
Sbjct: 55 LDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTGKPLIYTSGIWLL 114
Query: 110 LKSDLLPHCETDTVDPKS---RHKGKLNTESVLESKGVNWTSLR-PVYIYGPLNYNPVEE 165
+ E DP + R + L +GV + +R P P+ + +
Sbjct: 115 GPTGGQEEDEEAPDDPPTPAARAVSEAAALE-LAERGVRASVVRLP-----PVVHGRGDH 168
Query: 166 WFF----HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221
F + G G H D AR + L KA V++ E+ +
Sbjct: 169 GFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKA-GSVYHAVAEEGI 227
Query: 222 TFDGLARACAKVTGL 236
+A A + G+
Sbjct: 228 PVKDIAEAIGRRLGV 242
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 63/269 (23%), Positives = 91/269 (33%), Gaps = 57/269 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G FIG L L+ G +V + R E AE
Sbjct: 6 GANGFIGRALVDKLLSRGEEVRIAVR------NAENAEPSVVLAELP------------- 46
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALP-----NLE---------------QFI 101
D + G D V + R + D L N E +F+
Sbjct: 47 DIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFV 106
Query: 102 YCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
+ SS V + + P ETD P+ + + KL E L S G+ LRP +Y
Sbjct: 107 FLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMVY 166
Query: 156 GP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
GP N+ + + G P+P PG+ L + +L A + KA+
Sbjct: 167 GPGVRGNFARLMRL----IDRGLPLP-PGAVKNRRSLVSLDNLVDAIYLCISLPKAANGT 221
Query: 213 FNISGEKYVT----FDGLARACAKVTGLL 237
F +S V+ D + RA K T LL
Sbjct: 222 FLVSDGPPVSTAELVDEIRRALGKPTRLL 250
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 4e-07
Identities = 46/234 (19%), Positives = 89/234 (38%), Gaps = 40/234 (17%)
Query: 14 LLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG 72
LL G +V TR +P A+ L + +GD D + ++++L KG
Sbjct: 18 LLKDPGFKVRALTRDPSSPAAKALAAPGVEVV----------QGDLDDPESLEAAL--KG 65
Query: 73 FDVVY----DINGREADEVE---PILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTV 123
V+ DE+ ++DA ++ F++ S V + +PH
Sbjct: 66 VYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVPH------ 119
Query: 124 DPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGS 182
K E + + G+ T LRP + N + +++ G + +P
Sbjct: 120 -----FDSKAEVEEYIRASGLPATILRPAFFM----ENFLTPPAPQKMEDGTLTLVLPLD 170
Query: 183 GIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTG 235
+ V D+ A + + K + + ++G++ T + +A A +KV G
Sbjct: 171 PDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELAGDEL-TPEEIAAAFSKVLG 223
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 1e-06
Identities = 47/242 (19%), Positives = 73/242 (30%), Gaps = 68/242 (28%)
Query: 2 GGTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
G T G +V+E GH+VT R A + K+ ++GD
Sbjct: 6 GATGRTG----SAIVREALARGHEVTALVRDPAKL------------PAEHEKLKVVQGD 49
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEP---------ILDALPNLE--QFIYCSSA 106
D + VK +L +G D V G D I+ A+ + I A
Sbjct: 50 VLDLEDVKEAL--EGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107
Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTSLRP----------VY 153
G + + P + + + VL G++WT++RP Y
Sbjct: 108 GSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGATGGY 167
Query: 154 IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
L + GS I DLA + L + R+
Sbjct: 168 YRVELLVDAK----------------GGSRIS------RADLAIFMLDELETPEHVRKRP 205
Query: 214 NI 215
I
Sbjct: 206 TI 207
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 39/253 (15%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G + IG ++R L + G V L +R G LPG + A D D
Sbjct: 6 GASGPIGREVARELRRRGWDVRLVSRSGSKL--AWLPG--VEIVA----------ADAMD 51
Query: 61 YDFVKSSLSAKGFDVVYDING----READEVEPILD-----ALPNLEQFIYCSSAGVYLK 111
V + +A+G DV+Y R + P+++ A N + + + +Y
Sbjct: 52 ASSVIA--AARGADVIYHCANPAYTRWEELFPPLMENVVAAAEANGAKLVLPGNVYMYGP 109
Query: 112 SDLLPHCETDTVDPKSRHKGKLN---TESVLES---KGVNWTSLRPVYIYGPLNYNPVEE 165
P E P +R KG++ E +L + + +R YGP N
Sbjct: 110 QAGSPITEDTPFQPTTR-KGRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGAINS--- 165
Query: 166 WFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
W L A G+ PG+ + ++ D+ARA V + A + +++ G +T
Sbjct: 166 WLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDAFGEAWHLPGAGAIT 225
Query: 223 FDGLARACAKVTG 235
L A+ G
Sbjct: 226 TRELIAIAARAAG 238
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 97 LEQFIYCSSAGVY--LKSDLLPHCETDTVDPKSRHKG---KLNTESVLES-----KGVNW 146
+ + + SS VY + P E + K E +L +N
Sbjct: 102 VPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNV 161
Query: 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
T LRP I GP N F + R +P+PG Q H D+ARA VL
Sbjct: 162 TVLRPATILGPGTRN--TTRDF---LSPRRLPVPGGFDPPFQFLHEDDVARAL--VLAVR 214
Query: 207 KASRQVFNISGEKYVTFDGLARACAKVTGLL 237
+ +FN++G+ V + + L
Sbjct: 215 AGATGIFNVAGDGPVPLSLVLALLGRRPVPL 245
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 5e-05
Identities = 60/240 (25%), Positives = 94/240 (39%), Gaps = 36/240 (15%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGES------------DQEFAE 46
GG IG L L++ GHQV + F G+ P + D+ F +
Sbjct: 7 GGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIADKALVDKLFGD 66
Query: 47 FS-SKILHLKGDRKDYD-FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
F ++H KD D + + +L+ +VV N +A + +++ IY
Sbjct: 67 FKPDAVVHTAAAYKDPDDWYEDTLT----NVVGGANVVQAAKKA-------GVKRLIYFQ 115
Query: 105 SAGVY-LKSDLLP-HCETDTVDPKSRHK-GKLNTESVLESKGVNWTSLRPVYIYGPLNYN 161
+A Y LK P + P S + K E LE GV++ + R + GP N
Sbjct: 116 TALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFRLANVTGPRNVI 175
Query: 162 PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKY 220
F+ RLKAG+ + + VKDLAR + L + ++ SGE
Sbjct: 176 GPLPTFYQRLKAGKKCFVTDT---RRDFVFVKDLARVVDKAL-DGIRGHGAYHFSSGEDV 231
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 6e-05
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 140 ESKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195
+ G+ R YGP + P+ F G+P+PI G G+ V +V+D
Sbjct: 166 RTYGLPVVITRCSNNYGPYQFPEKLIPL---FILNALDGKPLPIYGDGLNVRDWLYVEDH 222
Query: 196 ARAFVQVLGNEKASRQVFNISGE 218
ARA VL + +++NI G
Sbjct: 223 ARAIELVL-EKGRVGEIYNIGGG 244
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 6e-05
Identities = 55/242 (22%), Positives = 95/242 (39%), Gaps = 34/242 (14%)
Query: 2 GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G T +G + L+ G VT+ TR + S EF K+ + D
Sbjct: 6 GATGTLGGPIVSALLASPGFTVTVLTRPSST--------SSNEFQPSGVKV--VPVDYAS 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEP-ILDALPNLEQFIYCSSAGV--YLKSDL-LP 116
++ + ++L KG D V G A + ++DA +AGV ++ S+ +
Sbjct: 56 HESLVAAL--KGVDAVISALGGAAIGDQLKLIDA---------AIAAGVKRFIPSEFGVD 104
Query: 117 HCETDTVDPKSRHKGKLNTESVLESK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
+ + K + L +K G+ WT V L+Y +E F A
Sbjct: 105 YDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTY---VSTGMFLDY-LLEPLFGVVDLAN 160
Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKV 233
R I G G ++D+ RA + L + ++ +V ++G+ VT + L +V
Sbjct: 161 RTATIYGDGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAGD-VVTQNELIALVERV 219
Query: 234 TG 235
TG
Sbjct: 220 TG 221
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 8e-05
Identities = 58/274 (21%), Positives = 95/274 (34%), Gaps = 56/274 (20%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G FIG L+ L EGH V RG A + EF D ++
Sbjct: 7 GAGGFIGSHLAERLKAEGHYV----RG-ADWKSPEHMTQPTDDDEF------HLVDLREM 55
Query: 62 DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN---------------LEQFIY 102
+ + G D V+ D+ G + + N +E+F++
Sbjct: 56 ENCLKATE--GVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLF 113
Query: 103 CSSAGVY-----LKSDLLPHCETDTVDPKSRHKG----KLNTESVL----ESKGVNWTSL 149
SSA VY L++ ++ E D P KL TE + E G+ +
Sbjct: 114 ASSACVYPEFKQLETTVVRLREED-AWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIV 172
Query: 150 RPVYIYGPL-NYNPVEEWFFHRL-------KAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201
R IYGP ++ E + K G I G G+Q ++ D +
Sbjct: 173 RFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRR 232
Query: 202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
++ E + N+ ++ V+ + LA +G
Sbjct: 233 LM--ESDFGEPVNLGSDEMVSMNELAEMVLSFSG 264
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 57/281 (20%), Positives = 99/281 (35%), Gaps = 49/281 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKD 60
GGT F+G L + L++ G +V + R ++ A + E+ E L+GD
Sbjct: 5 GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRV----LEGDLTQ 60
Query: 61 YDFVKSSLS-------AKGFDVV------YDING--READEV-----EPILDALPNLEQ- 99
+ LS A D V YD +A E +L+ L+
Sbjct: 61 PNL---GLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117
Query: 100 -FIYCSSAGVY-LKSDLLPHCETDTVDP------KSRHKGKLNTESVLESKGVNWTSLRP 151
F Y S+A V + + E + +S+ + + + + + T RP
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRA--AATQIPLTVYRP 175
Query: 152 VYIYGPLN-------YNPVEEWFFHRL-KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
+ G E + L K GR +P+PG+ L V +A A V +
Sbjct: 176 SIVVGDSKTGRIEKIDGLYE--LLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLS 233
Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRSLNL 244
+A+ Q+F+++ T +A L +
Sbjct: 234 KKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLM 274
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 41/263 (15%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG FIG L L++EG++V + + + + E + + F +K D D
Sbjct: 6 GGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRF------VKRDLLDT 59
Query: 62 DFVKSSLSAKGFDVVY------DINGREADEVEPILD---------------ALPNLEQF 100
++ K D V+ D+ D P +D +++
Sbjct: 60 ---ADKVAKKDGDTVFHLAANPDVRLGATD---PDIDLEENVLATYNVLEAMRANGVKRI 113
Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK----GVNWTSLRPVYIY 155
++ SS+ VY ++ ++P E P S + KL E+++ + G R I
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANIV 173
Query: 156 GPLNYNPVEEWFFHRLKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
GP + + V F ++LK P + + G G Q +V D A + +F
Sbjct: 174 GPRSTHGVIYDFINKLKR-NPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEGVNIF 232
Query: 214 NISGEKYVTFDGLARACAKVTGL 236
N+ + ++ + +A + GL
Sbjct: 233 NLGNDDTISVNEIAEIVIEELGL 255
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 143 GVNWTSLRPVYIYGPLNYNPVEEWF--------FHRLKA-GRPIPIP-GSGIQVTQLGHV 192
G + S P +YGP + E FH KA G P + GSG + + HV
Sbjct: 149 GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHV 208
Query: 193 KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
DLA A V ++ + V N+ VT LA +V G
Sbjct: 209 DDLADAVVFLMRRYSGAEHV-NVGSGDEVTIKELAELVKEVVG 250
|
Length = 306 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 7e-04
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
Query: 116 PHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
P+ E D +P + + K KL E + + + LR ++YG L N VE W
Sbjct: 115 PYKEEDAPNPLNVYGKSKLLGEVAVLNANPRYLILRTSWLYGELKNGENFVE-WMLRLAA 173
Query: 173 AGRPI----PIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNISGEKYVTFDGLA 227
+ + GS + DLA A ++++ E+ S ++++S ++ A
Sbjct: 174 ERKEVNVVHDQIGSPT------YAADLADAILELI--ERNSLTGIYHLSNSGPISKYEFA 225
Query: 228 RACAKVTGLLD 238
+ A GL D
Sbjct: 226 KLIADALGLPD 236
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.001
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE 39
GGT FIG L+R L GH+V + +R + A+ L
Sbjct: 6 GGTGFIGRALTRRLTAAGHEVVVLSR-RPGKAEGLAEV 42
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.002
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 15/128 (11%)
Query: 116 PHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
P+ E D P + + KL E + + LR ++YG N V+
Sbjct: 110 PYREDDPTGPLNVYGRTKLAGEQAVLAANPRHLILRTAWVYGEYGNNFVK-TMLRLAAER 168
Query: 175 RPIPIPGSGIQVT-QLG---HVKDLARAFVQVLG---NEKASRQVFNISGEKYVTFDGLA 227
+ + V QLG +DLA A + ++ A ++++G ++ A
Sbjct: 169 DELRV------VDDQLGSPTSARDLADALLALIRKRLRGPALAGTYHLAGSGETSWYDFA 222
Query: 228 RACAKVTG 235
RA G
Sbjct: 223 RAIFDEAG 230
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 55/253 (21%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G T IG ++ L++ G V R A A ++++ GD D
Sbjct: 4 TGATGRIGSKVATTLLEAGRPVRALVRSDERAA---------ALAARGAEVV--VGDLDD 52
Query: 61 YDFVKSSLSAKGFDVVY---------DINGREADEVEPILDALPN--LEQFIYCSSAGVY 109
+ ++L G D V+ D E AL +++ + SS G
Sbjct: 53 PAVLAAAL--AGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSVGAD 110
Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFH 169
+S + + +G E VL G+ LRP + +E
Sbjct: 111 PES------PSGLI------RGHWLMEQVLNWAGLPVVHLRPAWF--------MENLLSQ 150
Query: 170 R---LKAGR-PIPIPGSGIQVTQLGHV--KDLARAFVQVLGN-EKASRQVFNISGEKYVT 222
KAG +P PG G +L + D+AR ++L + E +V+ ++G + +T
Sbjct: 151 APSIRKAGVLALPFPGDG----RLPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDLT 206
Query: 223 FDGLARACAKVTG 235
+ +A A ++V G
Sbjct: 207 MNEIAAALSRVLG 219
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199
G+ R YGP Y E+ AG+P+P+ G G QV +V+D RA
Sbjct: 169 GLPALITRCSNNYGP--YQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI 226
Query: 200 VQVLGNEKA-SRQVFNISGEKYVT 222
VL EK + +NI G T
Sbjct: 227 YLVL--EKGRVGETYNIGGGNERT 248
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.002
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 2 GGT-RFIGVFLSRLLVKEGHQVTLF----TRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
GGT R + L+ LV GH+VTLF ++ AP+ +P +
Sbjct: 19 GGTERVVA-ALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEA-- 75
Query: 57 DRKDYDFVKSSLSAKGFDVVYD 78
+ +L+A FD+V++
Sbjct: 76 ----LALAERALAAGDFDIVHN 93
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 63/280 (22%), Positives = 91/280 (32%), Gaps = 93/280 (33%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGT FIG L++ L K GH+VT+ TR P A E + +A + L
Sbjct: 5 GGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTK-WEGYKPWAGEDADSL--------- 54
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILD------------------------ALPNL 97
+G D V ++ G EPI D A+
Sbjct: 55 ---------EGADAVINLAG------EPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAA 99
Query: 98 EQ----FIYCSSAGVYLKSDLLPHCETDTVDPK-------------SRHKGKLNTES--- 137
EQ FI S+ G Y S+ + E D+ ++ L T
Sbjct: 100 EQKPKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLL 159
Query: 138 ----VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
VL KG + + G G P+ GSG Q H++
Sbjct: 160 RTGIVLGPKGGALAKMLLPFRLG----------------LGGPL---GSGRQWFSWIHIE 200
Query: 194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKV 233
DL + + L N S N + + V A+A A+
Sbjct: 201 DLVQLILFALENASVS-GPVNATAPEPVRNKEFAKALARA 239
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPL 158
++ S+ V+ P+ ETDT +P + + KL E + + G LR ++YG
Sbjct: 95 LVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEY 154
Query: 159 NYNPVEEWFFHRLKAGRPIPIP----GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
N V+ K G+ + + GS + +DLA A +++L EK V++
Sbjct: 155 GNNFVK-TMLRLAKEGKELKVVDDQYGSPT------YTEDLADAILELLEKEKEGG-VYH 206
Query: 215 ISGEKYVTFDGLARACAKVTGL 236
+ ++ A+A + G+
Sbjct: 207 LVNSGECSWYEFAKAIFEEAGV 228
|
Length = 281 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 166 WFFHRLKAGRPIPIPGSG-IQVTQLGHVKDLARAFVQVLGNEKASR-QVFNISG 217
+F G+P+ I G G QV + H DL +++ N + +VFNI G
Sbjct: 216 YFLKCAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGG 269
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 61/269 (22%), Positives = 103/269 (38%), Gaps = 59/269 (21%)
Query: 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
FIG L LV++G++V F + G D E KI + GD +D D V+
Sbjct: 9 FIGSHLVEALVRQGYEVRAFVLYN---SFNSWGWLDTSPPEVKDKIEVVTGDIRDPDSVR 65
Query: 66 SSLSAKGFDVVY---------------------DINGREADEVEPILDALPNLEQFIYCS 104
++ KG DVV+ ++ G + ++ D +E+ ++ S
Sbjct: 66 KAM--KGCDVVFHLAALIAIPYSYIAPDSYVDTNVTG-TLNVLQAARDL--GVEKVVHTS 120
Query: 105 SAGVYLKSDLLPHCETDTVDPKSRHKG-KLNT----ESVLESKGVNWTSLRPVYIYGPLN 159
++ VY + +P E + +S + K+ S S T +RP YGP
Sbjct: 121 TSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRPFNTYGP-- 178
Query: 160 YNPVEEWFFHRLKAGRPIP-IPG---SGIQVTQLG---------HVKDLARAFVQVLGNE 206
R A IP I SG + +LG +V D R F+ + ++
Sbjct: 179 ----------RQSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIAESD 228
Query: 207 KASRQVFNISGEKYVTFDGLARACAKVTG 235
K +V NI ++ + A++ G
Sbjct: 229 KTVGEVINIGSNFEISIGDTVKLIAEIMG 257
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 295 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.98 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.98 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.98 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.98 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.97 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.97 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.97 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.97 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.97 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.97 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.97 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.97 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.97 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.97 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.97 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.97 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.96 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.96 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.96 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.96 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.96 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.96 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.96 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.95 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.95 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.95 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.95 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.94 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.94 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.94 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.94 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.94 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.94 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.93 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.92 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.92 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.92 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.91 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.91 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.9 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.9 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.9 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.9 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.87 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.85 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.85 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.85 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.84 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.8 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.78 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.78 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.77 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.76 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.75 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.75 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.74 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.72 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.71 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.7 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.7 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.69 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.68 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.68 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.67 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.67 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.66 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.66 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.66 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.65 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.64 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.63 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.62 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.62 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.61 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.61 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.61 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.6 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.59 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.59 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.59 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.58 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.58 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.58 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.58 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.57 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.57 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.56 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.56 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.56 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.55 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.55 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.54 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.54 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.54 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.53 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.52 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.52 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.52 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.52 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.51 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.51 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.51 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.51 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.5 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.5 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.5 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.49 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.49 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.49 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.48 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.47 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.47 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.47 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.47 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.45 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.45 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.45 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.44 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.44 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.43 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.43 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.43 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.43 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.43 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.42 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.41 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.41 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.4 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.39 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.38 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.38 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.38 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.36 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.35 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.35 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.34 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.31 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.31 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.3 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.3 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.26 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.26 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.26 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.25 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.24 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.24 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.23 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.22 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.22 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.21 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.21 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.19 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.18 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.18 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.17 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.16 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.15 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.15 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.12 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.12 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.11 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.1 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.08 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.08 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.07 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.04 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.03 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.02 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.02 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.99 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.98 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 98.9 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.85 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.77 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.77 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.73 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 98.72 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.68 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.66 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.64 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.63 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.62 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.54 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.52 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.52 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.51 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.43 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.42 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.41 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.34 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.22 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.21 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.2 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.17 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.04 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.04 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.84 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.8 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.65 | |
| PLN00106 | 323 | malate dehydrogenase | 97.63 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.57 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.51 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.47 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.42 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.33 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.31 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.26 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.18 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.03 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.0 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.76 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.75 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.7 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 96.67 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.65 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.63 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 96.54 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 96.48 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.26 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.22 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.17 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.12 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.08 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.07 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.05 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.03 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 95.91 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 95.88 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.85 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 95.83 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.75 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 95.73 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 95.7 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 95.62 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 95.6 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.58 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 95.51 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 95.49 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 95.48 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 95.48 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.46 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 95.46 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.36 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 95.34 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 95.2 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 95.19 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.17 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 95.16 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 95.1 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 95.07 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.03 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 95.02 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 94.98 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 94.96 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 94.95 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.92 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 94.89 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 94.84 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 94.81 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 94.8 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 94.79 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 94.76 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 94.73 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 94.72 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 94.7 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 94.59 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 94.58 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 94.57 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 94.5 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 94.43 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.43 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 94.42 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 94.4 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 94.37 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.36 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 94.23 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 94.21 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 94.19 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.17 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 94.16 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 94.16 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 94.14 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 94.13 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 94.09 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 94.07 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 94.07 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.05 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 94.05 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 94.02 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 94.0 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 93.95 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 93.93 | |
| PLN02494 | 477 | adenosylhomocysteinase | 93.85 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 93.83 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 93.78 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 93.76 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 93.76 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 93.76 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 93.74 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 93.71 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 93.71 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 93.65 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 93.61 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 93.58 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 93.57 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 93.56 | |
| COG1255 | 129 | Uncharacterized protein conserved in archaea [Func | 93.56 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 93.4 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 93.38 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 93.35 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 93.28 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 93.28 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.27 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 93.27 | |
| PLN02928 | 347 | oxidoreductase family protein | 93.25 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 93.24 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 93.11 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 93.11 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 93.1 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 93.03 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 93.01 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 93.0 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 92.99 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 92.98 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 92.97 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 92.96 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 92.94 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 92.92 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 92.92 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 92.89 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 92.86 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 92.83 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 92.83 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 92.8 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 92.79 | |
| PRK08223 | 287 | hypothetical protein; Validated | 92.69 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 92.67 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 92.62 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 92.6 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 92.56 | |
| PRK00257 | 381 | erythronate-4-phosphate dehydrogenase; Validated | 92.55 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 92.54 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 92.51 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 92.47 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 92.42 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 92.36 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 92.34 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 92.34 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 92.34 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 92.33 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 92.32 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 92.32 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 92.31 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 92.3 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 92.23 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 92.21 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 92.16 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 92.15 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 92.14 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 92.1 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 92.07 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 92.06 | |
| TIGR02279 | 503 | PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa | 92.05 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 92.01 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 91.94 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.79 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 91.77 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 91.75 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 91.71 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 91.7 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 91.63 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 91.49 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 91.47 | |
| PF03447 | 117 | NAD_binding_3: Homoserine dehydrogenase, NAD bindi | 91.44 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 91.36 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 91.33 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 91.26 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 91.15 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 91.14 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 91.13 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 91.13 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 91.02 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 90.97 | |
| PRK07411 | 390 | hypothetical protein; Validated | 90.97 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 90.93 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 90.86 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 90.85 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 90.83 | |
| TIGR00877 | 423 | purD phosphoribosylamine--glycine ligase. This enz | 90.83 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 90.75 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 90.72 | |
| PF03686 | 127 | UPF0146: Uncharacterised protein family (UPF0146); | 90.66 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 90.58 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 90.47 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=250.18 Aligned_cols=227 Identities=24% Similarity=0.303 Sum_probs=190.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++.+.+|++.|++|.+++.-.......+.. ..++++++|+.|.+.++++|++.++|+|||+|
T Consensus 6 tGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 6 TGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------LQFKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred ecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------ccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 79999999999999999999999999887764433321 11689999999999999999999999999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh-
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~- 140 (295)
|. |+.++.+|+++|+ ++++|||.||..|||.+...|++|+.+..|.+.| ++|.+.|++++
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d 155 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRD 155 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHH
Confidence 86 6778999999998 9999999999999999999999999999999765 99999999995
Q ss_pred ---hcCCcEEEeccCeeecCCC----------CCchHHHHHHHHHcCCC-cccCC------CCCceeeeeeHHHHHHHHH
Q 022578 141 ---SKGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAGRP-IPIPG------SGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 141 ---~~~~~~~i~R~~~i~g~~~----------~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~i~~~D~a~~i~ 200 (295)
..+++++++|..++-|... .+.+++.+++.+...++ +.++| ||...|++||+.|+|++.+
T Consensus 156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~ 235 (329)
T COG1087 156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV 235 (329)
T ss_pred HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence 5789999999999999531 13345555444433333 44444 6778899999999999999
Q ss_pred HHhcCCC--CCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 201 QVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.+++.-. ....+||++.+...|..|+++.+.+++|++
T Consensus 236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ 274 (329)
T COG1087 236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRD 274 (329)
T ss_pred HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCc
Confidence 9886422 122599999999999999999999999987
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=243.39 Aligned_cols=230 Identities=23% Similarity=0.270 Sum_probs=199.4
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCcc-ccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
|||.||||++++++++++. ++|+.++.-.-.. .+.+. .....++..++++|+.|.+.+.++++++++|+|+
T Consensus 6 TGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~------~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv 79 (340)
T COG1088 6 TGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA------DVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVV 79 (340)
T ss_pred ecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH------hhhcCCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence 7999999999999999984 5677777544221 11110 1222368999999999999999999988999999
Q ss_pred EcccC----------------ChhcHHHHHHhCC--CC-CcEEEeeccccccCCCC--CCCCCCCCCCCCccc-hhhHHH
Q 022578 78 DINGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDL--LPHCETDTVDPKSRH-KGKLNT 135 (295)
Q Consensus 78 ~~a~~----------------~~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~--~~~~e~~~~~p~~~~-~~k~~~ 135 (295)
|+|+. |+.+|.+||++++ .. -||+++||..|||+-.. ..++|+++..|++.| .+|+.+
T Consensus 80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAas 159 (340)
T COG1088 80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAAS 159 (340)
T ss_pred EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhH
Confidence 99986 6779999999998 33 49999999999997543 479999999999987 999999
Q ss_pred HHHhh----hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 022578 136 ESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210 (295)
Q Consensus 136 E~~~~----~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 210 (295)
+.+++ .+|++++|.|+++-|||.++ .-+++.++..+..|++++++|+|.+.++|+|++|-++++..++.++.. |
T Consensus 160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-G 238 (340)
T COG1088 160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-G 238 (340)
T ss_pred HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC-C
Confidence 98874 58999999999999999985 468999999999999999999999999999999999999999999866 9
Q ss_pred ceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++|||+++...+--|+++.|.+.+|+.
T Consensus 239 E~YNIgg~~E~~Nlevv~~i~~~l~~~ 265 (340)
T COG1088 239 ETYNIGGGNERTNLEVVKTICELLGKD 265 (340)
T ss_pred ceEEeCCCccchHHHHHHHHHHHhCcc
Confidence 999999999999999999999999987
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=260.06 Aligned_cols=234 Identities=19% Similarity=0.206 Sum_probs=188.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++|++|++++|................-.....++.++.+|+.|.+.+..+++ ++|+|||+|
T Consensus 21 tGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d~ViHlA 98 (348)
T PRK15181 21 TGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVDYVLHQA 98 (348)
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCCEEEECc
Confidence 799999999999999999999999998764321111000000000011368899999999999999999 899999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh-
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~- 140 (295)
+. |+.++.+++++|+ ++++|||+||..+||.....+..|+.+..|.+.| .+|..+|.+++
T Consensus 99 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~ 178 (348)
T PRK15181 99 ALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADV 178 (348)
T ss_pred cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence 74 4567899999998 8899999999999997666677777777777655 99999999874
Q ss_pred ---hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC--CCC
Q 022578 141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR 210 (295)
Q Consensus 141 ---~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~--~~~ 210 (295)
+.+++++++||+.+|||+.. ..+++.++..+..++++.+++++++.++++|++|+|++++.++..+. ..+
T Consensus 179 ~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~ 258 (348)
T PRK15181 179 FARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN 258 (348)
T ss_pred HHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCC
Confidence 45899999999999999753 13567777778888888888999999999999999999998775432 346
Q ss_pred ceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
++||+++++.+|+.|+++.+.+.++.
T Consensus 259 ~~yni~~g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 259 KVYNVAVGDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred CEEEecCCCcEeHHHHHHHHHHHhCc
Confidence 89999999999999999999999874
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=252.87 Aligned_cols=229 Identities=58% Similarity=0.978 Sum_probs=190.1
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||||||++|+++|+++||+|++++|+..... .........+... ..+++++.+|+.| +..++...++|+|||++
T Consensus 63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~ 138 (378)
T PLN00016 63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQ-KMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAGAGFDVVYDNN 138 (378)
T ss_pred CCceeEhHHHHHHHHHCCCEEEEEecCCcchh-hhccCchhhhhHhhhcCceEEEecHHH---HHhhhccCCccEEEeCC
Confidence 99999999999999999999999999876521 1110000001111 1368999999876 44555445899999999
Q ss_pred cCChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEeccCeeecCC
Q 022578 81 GREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPL 158 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R~~~i~g~~ 158 (295)
+.+..++++++++|+ ++++|||+||.++|+.....+..|.++..|.. +|..+|+++++.+++++++||+++|||+
T Consensus 139 ~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~---sK~~~E~~l~~~~l~~~ilRp~~vyG~~ 215 (378)
T PLN00016 139 GKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPG 215 (378)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc---hHHHHHHHHHHcCCCeEEEeceeEECCC
Confidence 988889999999997 89999999999999987666777877666654 7999999999999999999999999998
Q ss_pred CCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.......+++..+..++++.+++++++.++++|++|+|++++.++.++...+++||+++++.+|+.|+++.+++.+|.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~ 294 (378)
T PLN00016 216 NNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFP 294 (378)
T ss_pred CCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCC
Confidence 7655667777888888888888889999999999999999999998876667899999999999999999999999987
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=239.34 Aligned_cols=226 Identities=23% Similarity=0.321 Sum_probs=180.0
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||+|++|+++|+++| ++|+++++.+....... .......+++.+|++|++++.++++ ++|+|||
T Consensus 3 TGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~--------~~~~~~~~~~~~Di~d~~~l~~a~~--g~d~V~H 72 (280)
T PF01073_consen 3 TGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKD--------LQKSGVKEYIQGDITDPESLEEALE--GVDVVFH 72 (280)
T ss_pred EcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchh--------hhcccceeEEEeccccHHHHHHHhc--CCceEEE
Confidence 7999999999999999999 79999998876532110 0111234499999999999999999 9999999
Q ss_pred cccC---------------ChhcHHHHHHhCC--CCCcEEEeeccccccC-CCCCCC---CCCCCCC--CCccc-hhhHH
Q 022578 79 INGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPH---CETDTVD--PKSRH-KGKLN 134 (295)
Q Consensus 79 ~a~~---------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~-~~~~~~---~e~~~~~--p~~~~-~~k~~ 134 (295)
+|+. |+.+++|++++|. ++++|||+||.++++. ..+.++ +|+.+.. +...| .+|+.
T Consensus 73 ~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~ 152 (280)
T PF01073_consen 73 TAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKAL 152 (280)
T ss_pred eCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHH
Confidence 9875 6779999999998 9999999999999886 222232 3444332 33345 99999
Q ss_pred HHHHhhh-c--------CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 135 TESVLES-K--------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 135 ~E~~~~~-~--------~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
+|+++.+ . .+.++++||+.||||++.. +...+......|......++++...+++|++|+|++++.+.+.
T Consensus 153 AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~ 231 (280)
T PF01073_consen 153 AEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQA 231 (280)
T ss_pred HHHHHHhhcccccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHH
Confidence 9998843 2 2889999999999998643 3444566666776666668888899999999999999887642
Q ss_pred -------CCCCCceEEecCCcccC-HHHHHHHHHHHhCCC
Q 022578 206 -------EKASRQVFNISGEKYVT-FDGLARACAKVTGLL 237 (295)
Q Consensus 206 -------~~~~~~~~~i~~~~~~t-~~e~~~~i~~~~g~~ 237 (295)
....|+.|+|++++++. +.|++..+.+.+|.+
T Consensus 232 L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~ 271 (280)
T PF01073_consen 232 LLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYP 271 (280)
T ss_pred hccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCC
Confidence 23578999999999999 999999999999998
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=245.10 Aligned_cols=230 Identities=21% Similarity=0.244 Sum_probs=178.5
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||||||||++|+++|+++ |++|++++|............ ......+++++.+|+.|.+.+.++++ ++|+|||+
T Consensus 20 TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~----~~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~ViHl 93 (386)
T PLN02427 20 IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD----TVPWSGRIQFHRINIKHDSRLEGLIK--MADLTINL 93 (386)
T ss_pred ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccc----cccCCCCeEEEEcCCCChHHHHHHhh--cCCEEEEc
Confidence 799999999999999998 599999998765422111000 00012469999999999999999999 89999999
Q ss_pred ccC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCC-------------------
Q 022578 80 NGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV------------------- 123 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~------------------- 123 (295)
|+. |..++.+++++|+ ..++|||+||.++||...+.+.+|+.+.
T Consensus 94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~ 173 (386)
T PLN02427 94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFG 173 (386)
T ss_pred ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccC
Confidence 974 2335778888887 4489999999999987543333333221
Q ss_pred ---CCC-ccchhhHHHHHHhhh----cCCcEEEeccCeeecCCCC------------CchHHHHHHHHHcCCCcccCCCC
Q 022578 124 ---DPK-SRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSG 183 (295)
Q Consensus 124 ---~p~-~~~~~k~~~E~~~~~----~~~~~~i~R~~~i~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 183 (295)
.|. .|..+|..+|+++.. .+++++++||+++|||+.. ..++..++..+..++++.+++++
T Consensus 174 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g 253 (386)
T PLN02427 174 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGG 253 (386)
T ss_pred CCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCC
Confidence 112 355999999999853 6899999999999999742 12344556677788888888888
Q ss_pred CceeeeeeHHHHHHHHHHHhcCCC-CCCceEEecCC-cccCHHHHHHHHHHHhCC
Q 022578 184 IQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE-KYVTFDGLARACAKVTGL 236 (295)
Q Consensus 184 ~~~~~~i~~~D~a~~i~~~~~~~~-~~~~~~~i~~~-~~~t~~e~~~~i~~~~g~ 236 (295)
++.++++|++|+|++++.+++++. ..+++||++++ +.+++.|+++.+.+.+|.
T Consensus 254 ~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 254 QSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred CceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 899999999999999999998753 35679999997 589999999999999985
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=241.23 Aligned_cols=225 Identities=19% Similarity=0.288 Sum_probs=182.1
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCC-ChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++|+++|++. |++|++++|+......... ..+++++.+|++ +.+.+.++++ ++|+|||
T Consensus 7 tGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH 74 (347)
T PRK11908 7 LGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----------HPRMHFFEGDITINKEWIEYHVK--KCDVILP 74 (347)
T ss_pred ECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----------CCCeEEEeCCCCCCHHHHHHHHc--CCCEEEE
Confidence 799999999999999986 7999999987644221111 146899999998 7788888888 8999999
Q ss_pred cccC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCC-------CCCc-cchhhH
Q 022578 79 INGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKS-RHKGKL 133 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~p~~-~~~~k~ 133 (295)
+|+. |..++.+++++|+ ..++|||+||..+||...+.+++|+++. .|.+ |..+|.
T Consensus 75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~ 154 (347)
T PRK11908 75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ 154 (347)
T ss_pred CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence 9874 2456889999988 3479999999999997655566666432 2343 449999
Q ss_pred HHHHHhh----hcCCcEEEeccCeeecCCCC---------CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 134 ~~E~~~~----~~~~~~~i~R~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|++++ +.+++++++||+.+|||+.. ..++..++..+..++++.+.+++++.++|+|++|++++++
T Consensus 155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~ 234 (347)
T PRK11908 155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM 234 (347)
T ss_pred HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence 9999884 46899999999999999742 2356677788888888877788899999999999999999
Q ss_pred HHhcCCC--CCCceEEecCC-cccCHHHHHHHHHHHhCCC
Q 022578 201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~-~~~t~~e~~~~i~~~~g~~ 237 (295)
.++.++. ..+++||++++ ..+|+.|+++.+.+.+|..
T Consensus 235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~ 274 (347)
T PRK11908 235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEY 274 (347)
T ss_pred HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCc
Confidence 9998753 45789999997 4799999999999999965
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=244.96 Aligned_cols=235 Identities=19% Similarity=0.249 Sum_probs=177.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCcccc---CCCCC---C--chhhh---h-ccCCeEEEEecCCChHHHHHhh
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGE---S--DQEFA---E-FSSKILHLKGDRKDYDFVKSSL 68 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~---~--~~~~~---~-~~~~v~~~~~D~~~~~~~~~~~ 68 (295)
|||+||||++|+++|+++|++|++++|....... ..... . ...+. . ...+++++.+|++|.+.+.+++
T Consensus 53 TGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l 132 (442)
T PLN02572 53 IGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAF 132 (442)
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHH
Confidence 7999999999999999999999998754321100 00000 0 00000 0 0136899999999999999999
Q ss_pred hcCCCcEEEEcccC-------------------ChhcHHHHHHhCC--CCC-cEEEeeccccccCCCCCCCCC-------
Q 022578 69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCE------- 119 (295)
Q Consensus 69 ~~~~~d~vi~~a~~-------------------~~~~~~~ll~~~~--~~~-~~i~~Ss~~v~~~~~~~~~~e------- 119 (295)
+..++|+|||+|+. |+.++.+++++|+ +++ +||++||..+||... .+.+|
T Consensus 133 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~E~~i~~~~ 211 (442)
T PLN02572 133 KSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIEEGYITITH 211 (442)
T ss_pred HhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCccccccccc
Confidence 97779999999853 3457888999987 664 899999999998643 22222
Q ss_pred ----CC---CCCCCccc-hhhHHHHHHhh----hcCCcEEEeccCeeecCCCCC------------------chHHHHHH
Q 022578 120 ----TD---TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN------------------PVEEWFFH 169 (295)
Q Consensus 120 ----~~---~~~p~~~~-~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~------------------~~~~~~~~ 169 (295)
+. +..|.+.| .+|.++|.+++ .++++++++||+++|||++.. ..+..++.
T Consensus 212 ~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~ 291 (442)
T PLN02572 212 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCV 291 (442)
T ss_pred ccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHH
Confidence 21 34555544 99999998873 469999999999999998532 23455666
Q ss_pred HHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC--ceEEecCCcccCHHHHHHHHHHH---hCCC
Q 022578 170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKV---TGLL 237 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~--~~~~i~~~~~~t~~e~~~~i~~~---~g~~ 237 (295)
.+..|+++.++|++++.++|+|++|+|++++.+++++...+ .+||+++ +.+|+.|+++.+.+. +|.+
T Consensus 292 ~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~ 363 (442)
T PLN02572 292 QAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLD 363 (442)
T ss_pred HHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCC
Confidence 77778888888999999999999999999999988643333 4799976 679999999999999 8865
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=246.56 Aligned_cols=222 Identities=21% Similarity=0.248 Sum_probs=177.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|++++|........... +. ...+++++.+|+.+. .+. ++|+|||+|
T Consensus 126 TGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~-----~~-~~~~~~~~~~Di~~~-----~~~--~~D~ViHlA 192 (436)
T PLN02166 126 TGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH-----LF-GNPRFELIRHDVVEP-----ILL--EVDQIYHLA 192 (436)
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhh-----hc-cCCceEEEECccccc-----ccc--CCCEEEECc
Confidence 79999999999999999999999999864331111100 00 013678888888764 244 899999999
Q ss_pred cC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCC-----CCCCCccc-hhhHHHHH
Q 022578 81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES 137 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~p~~~~-~~k~~~E~ 137 (295)
+. |+.++.+++++|+ ...+|||+||.+|||.....+.+|+. +..|.+.| .+|..+|+
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~ 272 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET 272 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence 73 4557899999998 33599999999999987666777763 45555545 99999999
Q ss_pred Hhh----hcCCcEEEeccCeeecCCCC---CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 022578 138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210 (295)
Q Consensus 138 ~~~----~~~~~~~i~R~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 210 (295)
+++ ..+++++++||+++|||+.. ...+..++..+..++++.+++++++.++|+|++|+++++..+++.+ .+
T Consensus 273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~--~~ 350 (436)
T PLN02166 273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE--HV 350 (436)
T ss_pred HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC--CC
Confidence 874 45899999999999999852 3456778888888888888899999999999999999999998754 24
Q ss_pred ceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++||+++++.+|+.|+++.+.+.+|.+
T Consensus 351 giyNIgs~~~~Si~ela~~I~~~~g~~ 377 (436)
T PLN02166 351 GPFNLGNPGEFTMLELAEVVKETIDSS 377 (436)
T ss_pred ceEEeCCCCcEeHHHHHHHHHHHhCCC
Confidence 699999999999999999999999976
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=227.63 Aligned_cols=206 Identities=33% Similarity=0.489 Sum_probs=180.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|+.|+.+.|++...... ....+++++.+|+.|.+.+.++++..++|+|||++
T Consensus 4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFE----------EKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHH----------HHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred EccCCHHHHHHHHHHHHcCCccccccccccccccc----------cccceEEEEEeeccccccccccccccCceEEEEee
Confidence 69999999999999999999999999998873211 11137999999999999999999977789999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh-
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~- 140 (295)
+. |..++.++++++. +.++||++||..+|+.....+++|+.+..|.+.| .+|..+|++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~ 153 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRD 153 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 86 2346888999988 7789999999999999877888999988888766 99999999884
Q ss_pred ---hcCCcEEEeccCeeecCC----CCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceE
Q 022578 141 ---SKGVNWTSLRPVYIYGPL----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213 (295)
Q Consensus 141 ---~~~~~~~i~R~~~i~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~ 213 (295)
+.+++++++||+.+|||. ....++..++..+.+++++.+++++++.++++|++|+|++++.+++++...+++|
T Consensus 154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~y 233 (236)
T PF01370_consen 154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIY 233 (236)
T ss_dssp HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEE
T ss_pred cccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEE
Confidence 458999999999999999 4567888999999999998888999999999999999999999999987678899
Q ss_pred Eec
Q 022578 214 NIS 216 (295)
Q Consensus 214 ~i~ 216 (295)
|++
T Consensus 234 Nig 236 (236)
T PF01370_consen 234 NIG 236 (236)
T ss_dssp EES
T ss_pred EeC
Confidence 985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-33 Score=234.46 Aligned_cols=210 Identities=18% Similarity=0.174 Sum_probs=173.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++| +|++++|... .+.+|++|.+.+.++++..++|+|||||
T Consensus 6 tG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A 62 (299)
T PRK09987 6 FGKTGQVGWELQRALAPLG-NLIALDVHST----------------------DYCGDFSNPEGVAETVRKIRPDVIVNAA 62 (299)
T ss_pred ECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence 7999999999999999999 7998887532 2357999999999999877799999998
Q ss_pred cC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhhc
Q 022578 81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~ 142 (295)
+. |..++.+++++|+ ...+|||+||..||++....|++|+++..|.+.| .+|..+|++++..
T Consensus 63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~ 142 (299)
T PRK09987 63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH 142 (299)
T ss_pred ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 75 3446889999998 3358999999999998777789999998897765 9999999999888
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCC--CCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcc
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS--GIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY 220 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~ 220 (295)
..+++|+|++++|||++. +++..+++.+..++++.++++ +.....+...+|+++++..++..+.. +++||+++++.
T Consensus 143 ~~~~~ilR~~~vyGp~~~-~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giyni~~~~~ 220 (299)
T PRK09987 143 CAKHLIFRTSWVYAGKGN-NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVASGT 220 (299)
T ss_pred CCCEEEEecceecCCCCC-CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeEEeeCCCC
Confidence 889999999999999753 456777887778888887776 55555556677788888877765433 46999999999
Q ss_pred cCHHHHHHHHHHHhC
Q 022578 221 VTFDGLARACAKVTG 235 (295)
Q Consensus 221 ~t~~e~~~~i~~~~g 235 (295)
+|+.|+++.+.+..+
T Consensus 221 ~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 221 TTWHDYAALVFEEAR 235 (299)
T ss_pred ccHHHHHHHHHHHHH
Confidence 999999999988654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=234.70 Aligned_cols=235 Identities=17% Similarity=0.176 Sum_probs=183.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++|++|++++|.+.... ..+.............+++++.+|++|.+.+.++++..++|+|||+
T Consensus 6 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~ 85 (343)
T TIGR01472 6 TGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYNL 85 (343)
T ss_pred EcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCCEEEEC
Confidence 799999999999999999999999999865311 1110000000000013589999999999999999996678999999
Q ss_pred ccC----------------ChhcHHHHHHhCC--CC---CcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 80 NGR----------------EADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
|+. |..++.+++++|. ++ .+|||+||.++||.....+.+|+.+..|.+.| .+|..+|.
T Consensus 86 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~ 165 (343)
T TIGR01472 86 AAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHW 165 (343)
T ss_pred CcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence 985 2346889999986 44 38999999999997666678888888887766 99999999
Q ss_pred Hhh----hcCCcEEEeccCeeecCCCCCc----hHHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 022578 138 VLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 138 ~~~----~~~~~~~i~R~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
+++ +.++++++.|+.++|||+.... .+..++..+..++. ..++|++++.++|+|++|+|++++.+++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~- 244 (343)
T TIGR01472 166 ITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK- 244 (343)
T ss_pred HHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-
Confidence 884 3588899999999999974322 23344555556664 3445889999999999999999999988653
Q ss_pred CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 209 SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 209 ~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++.||+++++.+|+.|+++.+.+.+|++
T Consensus 245 -~~~yni~~g~~~s~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 245 -PDDYVIATGETHSVREFVEVSFEYIGKT 272 (343)
T ss_pred -CccEEecCCCceeHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999975
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=220.04 Aligned_cols=206 Identities=23% Similarity=0.260 Sum_probs=187.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||++|++|..|++.|. .+++|++++|.. .|++|++.+.+++++.+||+|||+|
T Consensus 6 ~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------------~Ditd~~~v~~~i~~~~PDvVIn~A 58 (281)
T COG1091 6 TGANGQLGTELRRALP-GEFEVIATDRAE--------------------------LDITDPDAVLEVIRETRPDVVINAA 58 (281)
T ss_pred EcCCChHHHHHHHHhC-CCceEEeccCcc--------------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence 7999999999999999 779999988763 5889999999999999999999999
Q ss_pred cC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhhc
Q 022578 81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~ 142 (295)
+. |..+..+++++|. -..++||+||..||.+..+.++.|+++..|.++| ++|..+|..+++.
T Consensus 59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~ 138 (281)
T COG1091 59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA 138 (281)
T ss_pred cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence 87 5668999999998 4459999999999999998999999999999987 9999999999999
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccC
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t 222 (295)
+.+..|+|.+++||... .+|...+++...+++++.+..+ +..+++++.|+|+++..++..... +++||+++....|
T Consensus 139 ~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~D--q~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~~g~~S 214 (281)
T COG1091 139 GPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDLADAILELLEKEKE-GGVYHLVNSGECS 214 (281)
T ss_pred CCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEECC--eeeCCccHHHHHHHHHHHHhcccc-CcEEEEeCCCccc
Confidence 99999999999999866 6778889999999999887654 889999999999999999988654 3499999988899
Q ss_pred HHHHHHHHHHHhCCC
Q 022578 223 FDGLARACAKVTGLL 237 (295)
Q Consensus 223 ~~e~~~~i~~~~g~~ 237 (295)
|.|+++.+.+.++.+
T Consensus 215 wydfa~~I~~~~~~~ 229 (281)
T COG1091 215 WYEFAKAIFEEAGVD 229 (281)
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999999976
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=235.08 Aligned_cols=222 Identities=19% Similarity=0.250 Sum_probs=178.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|.++||+|++++|......... ...++++.+|+++.+.+..+++ ++|+|||+|
T Consensus 27 tGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A 93 (370)
T PLN02695 27 TGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----------MFCHEFHLVDLRVMENCLKVTK--GVDHVFNLA 93 (370)
T ss_pred ECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----------cccceEEECCCCCHHHHHHHHh--CCCEEEEcc
Confidence 799999999999999999999999998754311100 0236788999999999998888 899999998
Q ss_pred cC-----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCC----CCCCCCC--CCCCCccc-hhhHH
Q 022578 81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCETD--TVDPKSRH-KGKLN 134 (295)
Q Consensus 81 ~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~----~~~~e~~--~~~p~~~~-~~k~~ 134 (295)
+. |..++.+++++|+ ++++|||+||..+|+.... .++.|++ +..|.+.| .+|..
T Consensus 94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~ 173 (370)
T PLN02695 94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 173 (370)
T ss_pred cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence 63 2446789999987 7899999999999986432 2466654 55666655 99999
Q ss_pred HHHHhh----hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHHc-CCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 135 TESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 135 ~E~~~~----~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+|++++ ..+++++++||+.+|||+.. ...+..++..+.. +.++.+++++++.++++|++|++++++.+++
T Consensus 174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~ 253 (370)
T PLN02695 174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK 253 (370)
T ss_pred HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence 999873 46999999999999999752 1234556665554 4677778899999999999999999999877
Q ss_pred CCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 205 NEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.+ .++.||+++++.+|+.|+++.+.+..|.+
T Consensus 254 ~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~ 284 (370)
T PLN02695 254 SD--FREPVNIGSDEMVSMNEMAEIALSFENKK 284 (370)
T ss_pred cc--CCCceEecCCCceeHHHHHHHHHHHhCCC
Confidence 64 35799999999999999999999999875
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=252.51 Aligned_cols=225 Identities=20% Similarity=0.227 Sum_probs=183.5
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHH-HHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~d~vi~ 78 (295)
|||+||||++|+++|+++ ||+|++++|.+........ ..+++++.+|++|.+. +.++++ ++|+|||
T Consensus 321 TGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----------~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViH 388 (660)
T PRK08125 321 LGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----------HPRFHFVEGDISIHSEWIEYHIK--KCDVVLP 388 (660)
T ss_pred ECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----------CCceEEEeccccCcHHHHHHHhc--CCCEEEE
Confidence 799999999999999986 7999999998754221111 1468999999998655 577888 8999999
Q ss_pred cccC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCC---C----CCc-cchhhH
Q 022578 79 INGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV---D----PKS-RHKGKL 133 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~---~----p~~-~~~~k~ 133 (295)
+|+. |..++.+++++|+ ..++|||+||..+||.....+++|+.+. . |.+ |..+|.
T Consensus 389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~ 468 (660)
T PRK08125 389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ 468 (660)
T ss_pred CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence 9874 4567889999988 3389999999999997666677887643 1 223 559999
Q ss_pred HHHHHhh----hcCCcEEEeccCeeecCCCC---------CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 134 ~~E~~~~----~~~~~~~i~R~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|++++ .++++++++||+++|||++. ...+..++..+..++++.+++++++.++++|++|++++++
T Consensus 469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~ 548 (660)
T PRK08125 469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF 548 (660)
T ss_pred HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence 9999884 46899999999999999753 2356677778888888877888999999999999999999
Q ss_pred HHhcCCC--CCCceEEecCCc-ccCHHHHHHHHHHHhCCC
Q 022578 201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGLL 237 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~~-~~t~~e~~~~i~~~~g~~ 237 (295)
.+++++. ..+++||+++++ .+|+.|+++.+.+.+|.+
T Consensus 549 ~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 549 RIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred HHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence 9998743 346799999985 799999999999999864
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=234.24 Aligned_cols=240 Identities=25% Similarity=0.334 Sum_probs=178.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|++|++|.++|.++|++|++++|. ..|++|.+.+.+.++..+||+|||||
T Consensus 6 ~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~~~~~~~pd~Vin~a 59 (286)
T PF04321_consen 6 TGASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAKLLEAFKPDVVINCA 59 (286)
T ss_dssp ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence 6999999999999999999999998766 24788999999999988999999999
Q ss_pred cC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhhc
Q 022578 81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~ 142 (295)
+. |+.++.+|+++|. ...++||+||..||++..+.++.|++++.|.+.| ++|.++|+.+++.
T Consensus 60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~ 139 (286)
T PF04321_consen 60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA 139 (286)
T ss_dssp ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 86 4567899999998 5669999999999998888899999999999876 9999999999887
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC---CCCceEEecCCc
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEK 219 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~---~~~~~~~i~~~~ 219 (295)
..++.|+|++++||+ ...+++.+++..+..++.+.++. +..+++++++|+|+++..++++.. ...++||+++++
T Consensus 140 ~~~~~IlR~~~~~g~-~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~ 216 (286)
T PF04321_consen 140 CPNALILRTSWVYGP-SGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE 216 (286)
T ss_dssp -SSEEEEEE-SEESS-SSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred cCCEEEEecceeccc-CCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence 779999999999999 44577888999999999888765 478999999999999999998643 235799999999
Q ss_pred ccCHHHHHHHHHHHhCCCCCCCCcccccCCcccchhhhhccccchhhHHHHhhhh
Q 022578 220 YVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLFHSGTSISLRQLRRQ 274 (295)
Q Consensus 220 ~~t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (295)
.+|+.|+++.+++.+|.+ ...+.+.+...+.....+ |.....+..++...
T Consensus 217 ~~S~~e~~~~i~~~~~~~---~~~i~~~~~~~~~~~~~r--p~~~~L~~~kl~~~ 266 (286)
T PF04321_consen 217 RVSRYEFAEAIAKILGLD---PELIKPVSSSEFPRAAPR--PRNTSLDCRKLKNL 266 (286)
T ss_dssp -EEHHHHHHHHHHHHTHC---TTEEEEESSTTSTTSSGS---SBE-B--HHHHHC
T ss_pred ccCHHHHHHHHHHHhCCC---CceEEecccccCCCCCCC--CCcccccHHHHHHc
Confidence 999999999999999988 235555555444443332 54555444544433
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=233.94 Aligned_cols=232 Identities=20% Similarity=0.226 Sum_probs=183.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||+++++.|+++|++|+++.++.......... .. .....+++++.+|++|.+.+.+++++.++|+|||+|
T Consensus 7 tGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A 82 (355)
T PRK10217 7 TGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL---AP-VAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLA 82 (355)
T ss_pred EcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh---hh-cccCCceEEEECCCcChHHHHHHHhhcCCCEEEECC
Confidence 79999999999999999998866544332221110000 00 000135788999999999999999866699999999
Q ss_pred cC----------------ChhcHHHHHHhCC-----------CCCcEEEeeccccccCCC--CCCCCCCCCCCCCccc-h
Q 022578 81 GR----------------EADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD--LLPHCETDTVDPKSRH-K 130 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-----------~~~~~i~~Ss~~v~~~~~--~~~~~e~~~~~p~~~~-~ 130 (295)
+. |..++.+++++|. ++++||++||.++|+... ..+++|+.+..|.+.| .
T Consensus 83 ~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~ 162 (355)
T PRK10217 83 AESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSA 162 (355)
T ss_pred cccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHH
Confidence 75 3456888888873 357999999999998642 3467888887777765 9
Q ss_pred hhHHHHHHhh----hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 131 ~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
+|..+|.+++ +.+++++++||+.+|||+.. ..++..++.....++++.+++++++.++++|++|++++++.++..
T Consensus 163 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~ 242 (355)
T PRK10217 163 SKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 (355)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence 9999998874 46899999999999999874 346667777777888887789999999999999999999999887
Q ss_pred CCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 206 EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 206 ~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+. .+++||+++++.+|+.|+++.+++.++..
T Consensus 243 ~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 243 GK-VGETYNIGGHNERKNLDVVETICELLEEL 273 (355)
T ss_pred CC-CCCeEEeCCCCcccHHHHHHHHHHHhccc
Confidence 43 46799999999999999999999999864
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=228.79 Aligned_cols=209 Identities=21% Similarity=0.220 Sum_probs=178.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||+++++.|+++|++|++++|. .+|+.+.+++.++++..++|+|||++
T Consensus 5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------~~d~~~~~~~~~~~~~~~~d~vi~~a 58 (287)
T TIGR01214 5 TGANGQLGRELVQQLSPEGRVVVALTSS--------------------------QLDLTDPEALERLLRAIRPDAVVNTA 58 (287)
T ss_pred EcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence 6999999999999999999999999874 25888999999999966779999999
Q ss_pred cC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhhc
Q 022578 81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~ 142 (295)
+. |..++.+++++++ ...+||++||.++|+.....+++|+++..|.+.| .+|..+|++++..
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~ 138 (287)
T TIGR01214 59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA 138 (287)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence 75 2335888898887 3349999999999987667788998888777765 9999999999988
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccC
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t 222 (295)
+.+++++||+++||++....+...++..+..++++.+.++ +.++++|++|+|+++..++..+...+++||+++++.+|
T Consensus 139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s 216 (287)
T TIGR01214 139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS 216 (287)
T ss_pred CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcC
Confidence 9999999999999998655566667777777777665543 67899999999999999998765567899999999999
Q ss_pred HHHHHHHHHHHhCCC
Q 022578 223 FDGLARACAKVTGLL 237 (295)
Q Consensus 223 ~~e~~~~i~~~~g~~ 237 (295)
+.|+++.+++.+|.+
T Consensus 217 ~~e~~~~i~~~~~~~ 231 (287)
T TIGR01214 217 WYEFAQAIFEEAGAD 231 (287)
T ss_pred HHHHHHHHHHHhCcc
Confidence 999999999999986
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=242.18 Aligned_cols=221 Identities=20% Similarity=0.241 Sum_probs=175.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++|++|++++|........... .....+++++.+|+.++ .+. ++|+|||+|
T Consensus 125 TGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~------~~~~~~~~~i~~D~~~~-----~l~--~~D~ViHlA 191 (442)
T PLN02206 125 TGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH------HFSNPNFELIRHDVVEP-----ILL--EVDQIYHLA 191 (442)
T ss_pred ECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh------hccCCceEEEECCccCh-----hhc--CCCEEEEee
Confidence 79999999999999999999999998764321111100 00124688899998765 344 799999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC-----CCCCCccc-hhhHHHH
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTE 136 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~p~~~~-~~k~~~E 136 (295)
+. |+.++.+++++|+ + .+|||+||..+|+.....+.+|+. +..+.+.| .+|..+|
T Consensus 192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE 270 (442)
T PLN02206 192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAE 270 (442)
T ss_pred eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHH
Confidence 73 4557899999998 5 499999999999876666666663 33344444 9999999
Q ss_pred HHhh----hcCCcEEEeccCeeecCCC---CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 137 SVLE----SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 137 ~~~~----~~~~~~~i~R~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
+++. ..+++++++||+.+|||+. ....+..++..+..++++.+++++++.++++|++|+|++++.+++.+ .
T Consensus 271 ~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~--~ 348 (442)
T PLN02206 271 TLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE--H 348 (442)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC--C
Confidence 9874 4689999999999999974 23456677788888888888899999999999999999999998754 2
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++.||+++++.+|+.|+++.+.+.+|.+
T Consensus 349 ~g~yNIgs~~~~sl~Elae~i~~~~g~~ 376 (442)
T PLN02206 349 VGPFNLGNPGEFTMLELAKVVQETIDPN 376 (442)
T ss_pred CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence 4699999999999999999999999865
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-32 Score=213.64 Aligned_cols=222 Identities=23% Similarity=0.299 Sum_probs=184.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||.||||++|++.|..+||.|++++-.-......+.... ..++++.+.-|+..+ ++. .+|.|||+|
T Consensus 33 tGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~------~~~~fel~~hdv~~p-----l~~--evD~IyhLA 99 (350)
T KOG1429|consen 33 TGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI------GHPNFELIRHDVVEP-----LLK--EVDQIYHLA 99 (350)
T ss_pred ecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc------cCcceeEEEeechhH-----HHH--Hhhhhhhhc
Confidence 7999999999999999999999999977666444433211 135778887776554 777 899999999
Q ss_pred cC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCC-----CCCCCccc-hhhHHHHH
Q 022578 81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES 137 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~p~~~~-~~k~~~E~ 137 (295)
+. |..++.+.+-.|+ -.+||++.||+.|||++...|..|+- +..|.+.| ..|..+|.
T Consensus 100 apasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~ 179 (350)
T KOG1429|consen 100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAET 179 (350)
T ss_pred cCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHH
Confidence 86 5567888887777 55899999999999997666666553 45566666 99999999
Q ss_pred Hh----hhcCCcEEEeccCeeecCCC---CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 022578 138 VL----ESKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210 (295)
Q Consensus 138 ~~----~~~~~~~~i~R~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 210 (295)
++ ++.|+++.|.|+.+.|||+. .+.....++.....++++.++|+|.+.++|.+++|+++.++.+++.+..
T Consensus 180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~-- 257 (350)
T KOG1429|consen 180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR-- 257 (350)
T ss_pred HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc--
Confidence 88 56789999999999999986 4567788889999999999999999999999999999999999998653
Q ss_pred ceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+-+|+++++.+|+.|+++++.+..+-.
T Consensus 258 ~pvNiGnp~e~Tm~elAemv~~~~~~~ 284 (350)
T KOG1429|consen 258 GPVNIGNPGEFTMLELAEMVKELIGPV 284 (350)
T ss_pred CCcccCCccceeHHHHHHHHHHHcCCC
Confidence 459999999999999999999999654
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.1e-31 Score=224.67 Aligned_cols=230 Identities=22% Similarity=0.290 Sum_probs=185.7
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
|||||+||++++++|++.| ++|++++|...... .... .+. ...+++++.+|++|++++.++++..++|+||
T Consensus 5 tGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 78 (317)
T TIGR01181 5 TGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-----DLE-DNPRYRFVKGDIGDRELVSRLFTEHQPDAVV 78 (317)
T ss_pred EcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-----hhc-cCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence 7999999999999999987 78999887532211 1110 000 1136889999999999999999955599999
Q ss_pred EcccC----------------ChhcHHHHHHhCC--CC-CcEEEeeccccccCCCC-CCCCCCCCCCCCccc-hhhHHHH
Q 022578 78 DINGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTE 136 (295)
Q Consensus 78 ~~a~~----------------~~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~-~~~~e~~~~~p~~~~-~~k~~~E 136 (295)
|+++. |..++.+++++|. .. .++|++||..+||.... .+++|..+..|...| .+|..+|
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e 158 (317)
T TIGR01181 79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASD 158 (317)
T ss_pred EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHH
Confidence 99975 3345778888886 23 48999999999986543 367888887777655 9999999
Q ss_pred HHhh----hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCc
Q 022578 137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211 (295)
Q Consensus 137 ~~~~----~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~ 211 (295)
.+++ +.+++++++||+.+|||... ..++..++..+..++++++++++++.++++|++|+++++..++.+. ..++
T Consensus 159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~-~~~~ 237 (317)
T TIGR01181 159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG-RVGE 237 (317)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC-CCCc
Confidence 9874 46899999999999999764 4567778888888888877788899999999999999999999764 3467
Q ss_pred eEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 212 VFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 212 ~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+||+++++.+++.|+++.+.+.+|.+
T Consensus 238 ~~~~~~~~~~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 238 TYNIGGGNERTNLEVVETILELLGKD 263 (317)
T ss_pred eEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 99999999999999999999999975
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=231.03 Aligned_cols=233 Identities=19% Similarity=0.177 Sum_probs=182.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++|++|++++|.+.... ..+..... .......+++++.+|++|.+.+..+++..++|+|||+
T Consensus 12 TGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 90 (340)
T PLN02653 12 TGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYI-DPHPNKARMKLHYGDLSDASSLRRWLDDIKPDEVYNL 90 (340)
T ss_pred ECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcc-ccccccCceEEEEecCCCHHHHHHHHHHcCCCEEEEC
Confidence 799999999999999999999999998764311 11100000 0000113588999999999999999986678999999
Q ss_pred ccC----------------ChhcHHHHHHhCC--CCC-----cEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHH
Q 022578 80 NGR----------------EADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT 135 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~ 135 (295)
|+. |..++.++++++. +.+ +||++||.++||.... +.+|+.+..|.+.| .+|.++
T Consensus 91 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~ 169 (340)
T PLN02653 91 AAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAA 169 (340)
T ss_pred CcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHH
Confidence 985 3446888999886 443 8999999999997655 78888888887765 999999
Q ss_pred HHHhh----hcCCcEEEeccCeeecCCCCCch----HHHHHHHHHcCCCccc-CCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 136 ESVLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 136 E~~~~----~~~~~~~i~R~~~i~g~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
|.+++ ++++.++..|+.++|||+....+ +..++..+..+++..+ .|++++.++|+|++|+|++++.+++++
T Consensus 170 e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~ 249 (340)
T PLN02653 170 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE 249 (340)
T ss_pred HHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC
Confidence 99874 45788889999999999753322 3334455666765543 488999999999999999999999875
Q ss_pred CCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 207 KASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 207 ~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
. ++.||+++++.+|+.|+++.+.+.+|.+
T Consensus 250 ~--~~~yni~~g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 250 K--PDDYVVATEESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred C--CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence 3 4689999999999999999999999864
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=211.68 Aligned_cols=230 Identities=23% Similarity=0.317 Sum_probs=194.9
Q ss_pred CCcCCcchHHHHHHHHHC--CCeEEEEecCCCcc-ccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
|||.||||++.++.+.+. .++.+.++.-.--. ...+. -....++..++.+|+-+...+..++....+|.|+
T Consensus 12 tgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~------~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi 85 (331)
T KOG0747|consen 12 TGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLE------PVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI 85 (331)
T ss_pred ecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhh------hhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence 799999999999999987 45665555322110 11111 1222378999999999999999999989999999
Q ss_pred EcccC----------------ChhcHHHHHHhCC---CCCcEEEeeccccccCCCCCCCC-CCCCCCCCccc-hhhHHHH
Q 022578 78 DINGR----------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC-ETDTVDPKSRH-KGKLNTE 136 (295)
Q Consensus 78 ~~a~~----------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~-e~~~~~p~~~~-~~k~~~E 136 (295)
|+|+. |+-++..|++++. ++++|||+||..|||++.+.... |.....|.+.| .+|+++|
T Consensus 86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE 165 (331)
T KOG0747|consen 86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE 165 (331)
T ss_pred hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence 99886 5667999999988 88999999999999998776666 88888998876 9999999
Q ss_pred HHhh----hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCc
Q 022578 137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211 (295)
Q Consensus 137 ~~~~----~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~ 211 (295)
..++ +++++++++|.++||||++. ...++.|+.....+++.++.|+|.+.++++|++|+++++..++..+ ..|+
T Consensus 166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg-~~ge 244 (331)
T KOG0747|consen 166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKG-ELGE 244 (331)
T ss_pred HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcC-Cccc
Confidence 9884 57899999999999999985 4578888888888999999999999999999999999999999884 4689
Q ss_pred eEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 212 VFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 212 ~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+|||+++..++..|+++.+.+.+.+.
T Consensus 245 IYNIgtd~e~~~~~l~k~i~eli~~~ 270 (331)
T KOG0747|consen 245 IYNIGTDDEMRVIDLAKDICELFEKR 270 (331)
T ss_pred eeeccCcchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999874
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-31 Score=246.82 Aligned_cols=230 Identities=23% Similarity=0.335 Sum_probs=185.5
Q ss_pred CCcCCcchHHHHHHHHHC--CCeEEEEecCCCcc-ccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
||||||||++++++|+++ +++|++++|..... ...+.. .....+++++.+|++|.+.+..++...++|+||
T Consensus 12 TGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 12 TGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP------SKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred ECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh------cccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 799999999999999998 68999998753210 000000 001247999999999999888877556899999
Q ss_pred EcccC----------------ChhcHHHHHHhCC--C-CCcEEEeeccccccCCCCCC---CCCCCCCCCCccc-hhhHH
Q 022578 78 DINGR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLP---HCETDTVDPKSRH-KGKLN 134 (295)
Q Consensus 78 ~~a~~----------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~---~~e~~~~~p~~~~-~~k~~ 134 (295)
|+|+. |+.++.+++++|+ + +++|||+||..+||.....+ ..|+.+..|.+.| .+|..
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 165 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG 165 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence 99985 2346889999987 4 78999999999999765432 3566666666654 99999
Q ss_pred HHHHhh----hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 135 ~E~~~~----~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
+|++++ +.+++++++||+++|||++. ..++..++..+..++++.+++++++.++++|++|+|+++..++... ..
T Consensus 166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~-~~ 244 (668)
T PLN02260 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG-EV 244 (668)
T ss_pred HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC-CC
Confidence 999884 46899999999999999874 3466777788888888888899999999999999999999988764 34
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+++.|+++.+++.+|.+
T Consensus 245 ~~vyni~~~~~~s~~el~~~i~~~~g~~ 272 (668)
T PLN02260 245 GHVYNIGTKKERRVIDVAKDICKLFGLD 272 (668)
T ss_pred CCEEEECCCCeeEHHHHHHHHHHHhCCC
Confidence 6799999999999999999999999976
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=223.18 Aligned_cols=211 Identities=21% Similarity=0.231 Sum_probs=170.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|++.|++.|++|+++.+. ..+|+++.+++..+++..++|+|||+|
T Consensus 3 tGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A 57 (306)
T PLN02725 3 AGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------KELDLTRQADVEAFFAKEKPTYVILAA 57 (306)
T ss_pred ccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence 7999999999999999999988865421 137999999999999977899999998
Q ss_pred cC-----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC----CCCCCc--cchhhHHH
Q 022578 81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKS--RHKGKLNT 135 (295)
Q Consensus 81 ~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~p~~--~~~~k~~~ 135 (295)
+. |..++.+++++|+ ++++||++||..||+.....+++|++ +..|.+ |..+|..+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 137 (306)
T PLN02725 58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG 137 (306)
T ss_pred eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence 64 3346888999988 78899999999999977677888876 444543 45999999
Q ss_pred HHHh----hhcCCcEEEeccCeeecCCCC-----CchHHHHHH----HHHcCCCccc-CCCCCceeeeeeHHHHHHHHHH
Q 022578 136 ESVL----ESKGVNWTSLRPVYIYGPLNY-----NPVEEWFFH----RLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 136 E~~~----~~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
|+++ +..+++++++||+.+|||+.. ...+..++. ....+.++.+ ++++++.++++|++|++++++.
T Consensus 138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~ 217 (306)
T PLN02725 138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF 217 (306)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence 9766 356899999999999999742 223344443 2345666554 6888999999999999999999
Q ss_pred HhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 202 ~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++..... ++.||+++++.+++.|+++.+.+.++.+
T Consensus 218 ~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~~~~ 252 (306)
T PLN02725 218 LMRRYSG-AEHVNVGSGDEVTIKELAELVKEVVGFE 252 (306)
T ss_pred HHhcccc-CcceEeCCCCcccHHHHHHHHHHHhCCC
Confidence 9886433 4678999999999999999999999876
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-31 Score=227.27 Aligned_cols=229 Identities=15% Similarity=0.187 Sum_probs=182.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||+++++.|+++|++|++++|+......... ......+++++.+|+++.+++.+++++.++|+|||+|
T Consensus 10 tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 10 TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFE------LLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHH------HHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 7999999999999999999999999988765221100 0111235778999999999999999977789999999
Q ss_pred cC----------------ChhcHHHHHHhCC--C-CCcEEEeeccccccCCC-CCCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
+. |..++.++++++. + +++||++||..+|+... ..+++|+.+..|.+.| .+|..+|.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~ 163 (349)
T TIGR02622 84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI 163 (349)
T ss_pred cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence 84 4557888999887 4 67999999999998643 2457777777776655 9999999888
Q ss_pred hh-----------cCCcEEEeccCeeecCCCC--CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 140 ES-----------KGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 140 ~~-----------~~~~~~i~R~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
+. .+++++++||+.+|||+.. ..+++.++..+..|+++.+ +++++.++|+|++|+|++++.+++..
T Consensus 164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~ 242 (349)
T TIGR02622 164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAEKL 242 (349)
T ss_pred HHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHHHH
Confidence 43 2899999999999999752 3567788888888888766 57889999999999999999877631
Q ss_pred ----CCCCceEEecCC--cccCHHHHHHHHHHHhCC
Q 022578 207 ----KASRQVFNISGE--KYVTFDGLARACAKVTGL 236 (295)
Q Consensus 207 ----~~~~~~~~i~~~--~~~t~~e~~~~i~~~~g~ 236 (295)
...++.||++++ +.++..|+++.+.+.++.
T Consensus 243 ~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~ 278 (349)
T TIGR02622 243 FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG 278 (349)
T ss_pred hhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence 123579999974 689999999999987653
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-31 Score=225.05 Aligned_cols=220 Identities=18% Similarity=0.160 Sum_probs=164.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HH-HHHhhhc---CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DF-VKSSLSA---KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~-~~~~~~~---~~~ 73 (295)
|||+||||++|+++|+++|++++++.|...... . ...+..+|+.|. +. +..++.. .++
T Consensus 5 tGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~-~--------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-K--------------FVNLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred ecCCcHHHHHHHHHHHhCCCceEEEecCCCcch-H--------------HHhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 799999999999999999998777776654311 0 011233455443 33 2333321 279
Q ss_pred cEEEEcccC--------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 74 DVVYDINGR--------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 74 d~vi~~a~~--------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
|+|||+|+. |..++.+++++|+ ...+|||+||.++|+.....+.+|+.+..|.+.| .+|..+|+
T Consensus 70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 149 (308)
T PRK11150 70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDE 149 (308)
T ss_pred cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHH
Confidence 999999873 3456889999988 3347999999999997655567787777777655 99999998
Q ss_pred Hhhh----cCCcEEEeccCeeecCCCCC-c----hHHHHHHHHHcCCCcccC-CCCCceeeeeeHHHHHHHHHHHhcCCC
Q 022578 138 VLES----KGVNWTSLRPVYIYGPLNYN-P----VEEWFFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEK 207 (295)
Q Consensus 138 ~~~~----~~~~~~i~R~~~i~g~~~~~-~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~D~a~~i~~~~~~~~ 207 (295)
+++. .+++++++||+++|||+... . ....+...+..++...++ ++++..++++|++|+|++++.+++.+.
T Consensus 150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~ 229 (308)
T PRK11150 150 YVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV 229 (308)
T ss_pred HHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC
Confidence 8753 58999999999999998632 1 233444667777654333 666778999999999999999887642
Q ss_pred CCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 208 ASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 208 ~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+|+.|+++.+.+.+|..
T Consensus 230 --~~~yni~~~~~~s~~el~~~i~~~~~~~ 257 (308)
T PRK11150 230 --SGIFNCGTGRAESFQAVADAVLAYHKKG 257 (308)
T ss_pred --CCeEEcCCCCceeHHHHHHHHHHHhCCC
Confidence 4699999999999999999999999853
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=225.96 Aligned_cols=214 Identities=18% Similarity=0.210 Sum_probs=169.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||+|++++++|+++||+|++++|+++... .+. ..+++++.+|++|++++..+++ ++|+|||++
T Consensus 6 tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~l~----------~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~ 72 (317)
T CHL00194 6 IGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-FLK----------EWGAELVYGDLSLPETLPPSFK--GVTAIIDAS 72 (317)
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-hHh----------hcCCEEEECCCCCHHHHHHHHC--CCCEEEECC
Confidence 799999999999999999999999999875421 111 1479999999999999999999 999999997
Q ss_pred cC-----------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEE
Q 022578 81 GR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWT 147 (295)
Q Consensus 81 ~~-----------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ 147 (295)
+. |..++.+++++|+ +++|||++||.++... .+..+..+|..+|+++++.+++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~------------~~~~~~~~K~~~e~~l~~~~l~~t 140 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY------------PYIPLMKLKSDIEQKLKKSGIPYT 140 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc------------CCChHHHHHHHHHHHHHHcCCCeE
Confidence 63 3456789999987 8999999998654210 112345889999999999999999
Q ss_pred EeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHH
Q 022578 148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA 227 (295)
Q Consensus 148 i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~ 227 (295)
++||+.+|+.. ...+......++++.+ .++++.++++|++|+|++++.++.++...+++||+++++.+|+.|++
T Consensus 141 ilRp~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~ 214 (317)
T CHL00194 141 IFRLAGFFQGL-----ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEII 214 (317)
T ss_pred EEeecHHhhhh-----hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHH
Confidence 99999888642 1111222233455444 44567789999999999999999877667899999999999999999
Q ss_pred HHHHHHhCCCCCCCCcccccCC
Q 022578 228 RACAKVTGLLDFRSLNLCTTTP 249 (295)
Q Consensus 228 ~~i~~~~g~~~~~~~~~~~~~~ 249 (295)
+.+++.+|++ ..+.+.+.
T Consensus 215 ~~~~~~~g~~----~~~~~vp~ 232 (317)
T CHL00194 215 SLCEQLSGQK----AKISRVPL 232 (317)
T ss_pred HHHHHHhCCC----CeEEeCCH
Confidence 9999999987 44555554
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=223.60 Aligned_cols=230 Identities=20% Similarity=0.243 Sum_probs=181.5
Q ss_pred CCcCCcchHHHHHHHHHCCCe-EEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++|++ |+++++...... ..... .....+++++.+|++|.+++.+++++.++|+|||
T Consensus 6 TGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 6 TGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAD------VSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred ECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHh------cccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 799999999999999999976 555554321100 00000 0001357889999999999999998667999999
Q ss_pred cccC----------------ChhcHHHHHHhCC-----------CCCcEEEeeccccccCCC----------CCCCCCCC
Q 022578 79 INGR----------------EADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD----------LLPHCETD 121 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~-----------~~~~~i~~Ss~~v~~~~~----------~~~~~e~~ 121 (295)
+|+. |..++.+++++|. ++.+||++||.++|+... ..+++|++
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 9975 3457889999885 245899999999998531 12467888
Q ss_pred CCCCCccc-hhhHHHHHHhh----hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 122 ~~~p~~~~-~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
+..|.+.| .+|..+|.+++ ..+++++++|++.+|||+.. ..++..++..+..+.++.+++++++.++++|++|+
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~ 239 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence 87777766 99999998874 46899999999999999863 34566677777778777777889999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 196 a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|++++.+++.+ ..++.||+++++.+++.|+++.+++.+|..
T Consensus 240 a~a~~~~l~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 240 ARALYKVVTEG-KAGETYNIGGHNEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred HHHHHHHHhcC-CCCceEEeCCCCcCcHHHHHHHHHHHhccc
Confidence 99999988764 346899999999999999999999999864
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=225.11 Aligned_cols=235 Identities=20% Similarity=0.274 Sum_probs=178.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||+|++++++|+++|++|++++|........... ..... ....+++++.+|++|++.+..++++.++|+|||+
T Consensus 11 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~ 88 (352)
T PLN02240 11 TGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRR--VKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHF 88 (352)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHH--HHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEEEEc
Confidence 79999999999999999999999998764331100000 00000 0124688999999999999999986689999999
Q ss_pred ccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh
Q 022578 80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE 140 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~ 140 (295)
++. |..++.+++++|. ++++||++||.++|+...+.+++|+.+..|...| .+|..+|++++
T Consensus 89 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~ 168 (352)
T PLN02240 89 AGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICR 168 (352)
T ss_pred cccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 975 2346788999886 7789999999999987767788999888877665 99999999885
Q ss_pred h-----cCCcEEEeccCeeecCCCC----------CchHHHHHHHHHcCC--CcccCC------CCCceeeeeeHHHHHH
Q 022578 141 S-----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDLAR 197 (295)
Q Consensus 141 ~-----~~~~~~i~R~~~i~g~~~~----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~a~ 197 (295)
. .+++++++|++.+||++.. ...+..++..+..++ .+.+.+ ++.+.++++|++|+|+
T Consensus 169 ~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~ 248 (352)
T PLN02240 169 DIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLAD 248 (352)
T ss_pred HHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHH
Confidence 2 4688999999999997421 111222344444443 333333 6789999999999999
Q ss_pred HHHHHhcC----CCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 198 AFVQVLGN----EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 198 ~i~~~~~~----~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++.++.. +...+++||+++++.+|++|+++.+++.+|.+
T Consensus 249 a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~ 292 (352)
T PLN02240 249 GHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKK 292 (352)
T ss_pred HHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCC
Confidence 99888753 23345799999999999999999999999976
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=223.82 Aligned_cols=231 Identities=23% Similarity=0.342 Sum_probs=174.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++|++|++++|.......... .+... ..++.++.+|++|.+.+.++++..++|+|||+
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 6 TGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHH-----HHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 7999999999999999999999999875433111100 00111 13577899999999999999986679999999
Q ss_pred ccCC----------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCC-CCCccc-hhhHHHHHHh
Q 022578 80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVL 139 (295)
Q Consensus 80 a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-~p~~~~-~~k~~~E~~~ 139 (295)
|+.. ..++.+++++|+ ++++||++||.++|+.....+++|+.+. .|...| .+|..+|+++
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~ 160 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence 8742 236788999887 7889999999999987666778888876 555555 9999999988
Q ss_pred hh-----cCCcEEEeccCeeecCCC------C-----CchHHHHHHHHHcCC--CcccCC------CCCceeeeeeHHHH
Q 022578 140 ES-----KGVNWTSLRPVYIYGPLN------Y-----NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDL 195 (295)
Q Consensus 140 ~~-----~~~~~~i~R~~~i~g~~~------~-----~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~ 195 (295)
++ .+++++++|++.+||+.. . ..+...+ ..+..+. .+.+++ ++.+.++++|++|+
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~ 239 (338)
T PRK10675 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI-AQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239 (338)
T ss_pred HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHH-HHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence 53 368899999999999741 0 1122333 3333332 232322 57788999999999
Q ss_pred HHHHHHHhcCC--CCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 196 ARAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 196 a~~i~~~~~~~--~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|++++.++... ...+++||+++++.+|+.|+++.+.+.+|++
T Consensus 240 a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 283 (338)
T PRK10675 240 ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKP 283 (338)
T ss_pred HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCC
Confidence 99999988752 2335799999999999999999999999976
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=217.68 Aligned_cols=221 Identities=31% Similarity=0.430 Sum_probs=183.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCC-cEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF-DVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-d~vi~~ 79 (295)
|||+||||++|+++|+++||+|++++|...+..... .+++++.+|+++.+.+..+++ .+ |+|||+
T Consensus 6 tG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~--~~~d~vih~ 71 (314)
T COG0451 6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAK--GVPDAVIHL 71 (314)
T ss_pred EcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHh--cCCCEEEEc
Confidence 799999999999999999999999999887743221 368899999999988888888 66 999999
Q ss_pred ccC-----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCC-CCCCCCCC-CCCCCCc-cchhhHHHHH
Q 022578 80 NGR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCET-DTVDPKS-RHKGKLNTES 137 (295)
Q Consensus 80 a~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~-~~~~p~~-~~~~k~~~E~ 137 (295)
++. |+.++.+++++|+ ++++|||.||.++|+.. .+.+++|+ .+..|.+ |..+|+.+|+
T Consensus 72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~ 151 (314)
T COG0451 72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ 151 (314)
T ss_pred cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence 875 3346889999998 89999998888888765 34477888 6777776 4599999999
Q ss_pred Hhhh----cCCcEEEeccCeeecCCCCCc----hHHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 022578 138 VLES----KGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 138 ~~~~----~~~~~~i~R~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
++.. .+++++++||+.+|||+.... +...++.....+.+ +...++++..++++|++|++++++.+++++..
T Consensus 152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 231 (314)
T COG0451 152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG 231 (314)
T ss_pred HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence 9854 469999999999999987543 44445555667775 55556778889999999999999999998655
Q ss_pred CCceEEecCCc-ccCHHHHHHHHHHHhCCC
Q 022578 209 SRQVFNISGEK-YVTFDGLARACAKVTGLL 237 (295)
Q Consensus 209 ~~~~~~i~~~~-~~t~~e~~~~i~~~~g~~ 237 (295)
. .||++++. ..++.|+++.+.+.+|.+
T Consensus 232 ~--~~ni~~~~~~~~~~e~~~~~~~~~~~~ 259 (314)
T COG0451 232 G--VFNIGSGTAEITVRELAEAVAEAVGSK 259 (314)
T ss_pred c--EEEeCCCCCcEEHHHHHHHHHHHhCCC
Confidence 3 99999997 899999999999999987
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=217.70 Aligned_cols=223 Identities=19% Similarity=0.247 Sum_probs=168.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|+.+...... ...+.....+++++.+|++|.+.+.++++ ++|+|||+|
T Consensus 16 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A 89 (342)
T PLN02214 16 TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTH----LRELEGGKERLILCKADLQDYEALKAAID--GCDGVFHTA 89 (342)
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHH----HHHhhCCCCcEEEEecCcCChHHHHHHHh--cCCEEEEec
Confidence 799999999999999999999999999865421100 00001111358899999999999999999 899999999
Q ss_pred cC-----------ChhcHHHHHHhCC--CCCcEEEeecc-ccccCCCC---CCCCCCC------CCCCCccc-hhhHHHH
Q 022578 81 GR-----------EADEVEPILDALP--NLEQFIYCSSA-GVYLKSDL---LPHCETD------TVDPKSRH-KGKLNTE 136 (295)
Q Consensus 81 ~~-----------~~~~~~~ll~~~~--~~~~~i~~Ss~-~v~~~~~~---~~~~e~~------~~~p~~~~-~~k~~~E 136 (295)
+. |+.++.+++++|. ++++||++||. .+||.... .+++|+. +..|.+.| .+|..+|
T Consensus 90 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE 169 (342)
T PLN02214 90 SPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAE 169 (342)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHH
Confidence 86 4567899999987 78899999996 58875322 3467764 23344444 9999999
Q ss_pred HHhh----hcCCcEEEeccCeeecCCCCC---chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 137 SVLE----SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 137 ~~~~----~~~~~~~i~R~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
+++. +.+++++++||+.+|||+... .....++ ....++... .+ ++.++|||++|+|++++.+++++..
T Consensus 170 ~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~~--~~~~~~i~V~Dva~a~~~al~~~~~- 244 (342)
T PLN02214 170 QAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-YA--NLTQAYVDVRDVALAHVLVYEAPSA- 244 (342)
T ss_pred HHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-CC--CCCcCeeEHHHHHHHHHHHHhCccc-
Confidence 9874 458999999999999998642 1222233 334455432 23 4578999999999999999987644
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
++.||+++ ..+++.|+++.+++.++
T Consensus 245 ~g~yn~~~-~~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 245 SGRYLLAE-SARHRGEVVEILAKLFP 269 (342)
T ss_pred CCcEEEec-CCCCHHHHHHHHHHHCC
Confidence 45899987 46899999999999986
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=213.91 Aligned_cols=222 Identities=22% Similarity=0.284 Sum_probs=170.6
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc--CCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--~~~d~vi 77 (295)
|||+||||+++++.|.++|+ +|++++|..... .+. . .....+.+|+.+.+.++.+.+. .++|+||
T Consensus 4 tGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~--------~--~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv 71 (314)
T TIGR02197 4 TGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFL--------N--LADLVIADYIDKEDFLDRLEKGAFGKIEAIF 71 (314)
T ss_pred eCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhh--------h--hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence 79999999999999999997 788887765431 110 0 1123567788888777765531 4899999
Q ss_pred EcccC--------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCC-CCCCccc-hhhHHHHHHhh
Q 022578 78 DINGR--------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDT-VDPKSRH-KGKLNTESVLE 140 (295)
Q Consensus 78 ~~a~~--------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~-~~p~~~~-~~k~~~E~~~~ 140 (295)
|+|+. |..++.+++++|. ...+||++||.++|+.... ++.|+++ ..|.+.| .+|..+|++++
T Consensus 72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~ 150 (314)
T TIGR02197 72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVR 150 (314)
T ss_pred ECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHH
Confidence 99975 3456888999987 3348999999999987543 4556554 3465555 99999999875
Q ss_pred h------cCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccC------CCCCceeeeeeHHHHHHHHHHHh
Q 022578 141 S------KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 141 ~------~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+ .+++++++||+.+|||+.. ...+..++..+..++++.++ +++++.++++|++|++++++.++
T Consensus 151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~ 230 (314)
T TIGR02197 151 RRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLL 230 (314)
T ss_pred HHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHH
Confidence 4 2578999999999999853 13455566777777766443 46788899999999999999999
Q ss_pred cCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 204 ~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.. ..+++||+++++++|+.|+++.+.+.+|.+
T Consensus 231 ~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~ 262 (314)
T TIGR02197 231 EN--GVSGIFNLGTGRARSFNDLADAVFKALGKD 262 (314)
T ss_pred hc--ccCceEEcCCCCCccHHHHHHHHHHHhCCC
Confidence 87 346799999999999999999999999976
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=214.85 Aligned_cols=231 Identities=23% Similarity=0.334 Sum_probs=177.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|+||+.+++.|+++|++|++++|........... ... ..+++++.+|+.+++.+.++++..++|+|||++
T Consensus 5 ~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 5 TGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKR-----GER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred eCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhh-----hcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 79999999999999999999999887644331111110 000 125788999999999999999866899999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhh
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~ 141 (295)
+. |..++.+++++|. +++++|++||..+|+.....+++|+++..|...| .+|..+|.+++.
T Consensus 79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~ 158 (328)
T TIGR01179 79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRD 158 (328)
T ss_pred cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHH
Confidence 75 3446788888887 7789999999999987766678888887777655 999999998743
Q ss_pred -----cCCcEEEeccCeeecCCCC----------CchHHHHHHHHH-cCCCcccC------CCCCceeeeeeHHHHHHHH
Q 022578 142 -----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 142 -----~~~~~~i~R~~~i~g~~~~----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~~~D~a~~i 199 (295)
.+++++++||+.+||+... ..++..+..... ....+..+ +++++.++++|++|+++++
T Consensus 159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~ 238 (328)
T TIGR01179 159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH 238 (328)
T ss_pred HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence 6899999999999998531 123333433332 22333222 3567889999999999999
Q ss_pred HHHhcCC--CCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 200 VQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+.++... ...+++||+++++.+|+.|+++.+++.+|++
T Consensus 239 ~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~ 278 (328)
T TIGR01179 239 LAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVD 278 (328)
T ss_pred HHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCC
Confidence 9998752 2346899999999999999999999999987
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=206.08 Aligned_cols=227 Identities=19% Similarity=0.206 Sum_probs=172.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++||.|+++.|+++.... .. ....+.....+..++.+|++|++++.++++ +||.|||+|
T Consensus 12 TGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~-~~--~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdgVfH~A 86 (327)
T KOG1502|consen 12 TGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK-TE--HLRKLEGAKERLKLFKADLLDEGSFDKAID--GCDGVFHTA 86 (327)
T ss_pred eCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh-HH--HHHhcccCcccceEEeccccccchHHHHHh--CCCEEEEeC
Confidence 7999999999999999999999999999988211 00 001112223468999999999999999999 999999999
Q ss_pred cC---------------ChhcHHHHHHhCC---CCCcEEEeeccccccC-----CCCCCCCCCCCCCCC------ccc-h
Q 022578 81 GR---------------EADEVEPILDALP---NLEQFIYCSSAGVYLK-----SDLLPHCETDTVDPK------SRH-K 130 (295)
Q Consensus 81 ~~---------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~~~p~------~~~-~ 130 (295)
.+ ++.++.|++++|+ .++|+|++||.+.-.. .....++|+.-..+. .+| .
T Consensus 87 sp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~ 166 (327)
T KOG1502|consen 87 SPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYAL 166 (327)
T ss_pred ccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHH
Confidence 86 3568999999998 4899999999776542 223445565532221 234 8
Q ss_pred hhHHHHHHh----hhcCCcEEEeccCeeecCCCCC--chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 131 ~k~~~E~~~----~~~~~~~~i~R~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+|..+|+.. ++.+++.+.+.|+.|+||.... +.....+....+|..-..+ +....++|++|+|++.+.+++
T Consensus 167 sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a~E 243 (327)
T KOG1502|consen 167 SKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVLALE 243 (327)
T ss_pred HHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHHHHc
Confidence 999999865 5678999999999999998643 3334455555566543322 234559999999999999999
Q ss_pred CCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 205 NEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.+... ++|.+.+.. .++.|+++.+.+.+...
T Consensus 244 ~~~a~-GRyic~~~~-~~~~ei~~~l~~~~P~~ 274 (327)
T KOG1502|consen 244 KPSAK-GRYICVGEV-VSIKEIADILRELFPDY 274 (327)
T ss_pred CcccC-ceEEEecCc-ccHHHHHHHHHHhCCCC
Confidence 98775 588787755 56999999999998765
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-29 Score=213.30 Aligned_cols=225 Identities=17% Similarity=0.169 Sum_probs=170.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|++........ .........+++++.+|++|.+.+.++++ ++|+|||+|
T Consensus 11 tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A 85 (325)
T PLN02989 11 TGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDH---LLALDGAKERLKLFKADLLDEGSFELAID--GCETVFHTA 85 (325)
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHH---HHhccCCCCceEEEeCCCCCchHHHHHHc--CCCEEEEeC
Confidence 7999999999999999999999999888764211000 00000011468899999999999999998 899999999
Q ss_pred cC----------------ChhcHHHHHHhCC---CCCcEEEeeccccccCC-----CCCCCCCCCCCCCC-------ccc
Q 022578 81 GR----------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTVDPK-------SRH 129 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~-----~~~~~~e~~~~~p~-------~~~ 129 (295)
+. |..++.++++++. +.++||++||..+|+.. ...+++|+.+..|. .|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~ 165 (325)
T PLN02989 86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV 165 (325)
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence 84 2345778888875 45799999999887643 23456788776553 355
Q ss_pred hhhHHHHHHhh----hcCCcEEEeccCeeecCCCCC--chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 130 ~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
.+|..+|+++. ..+++++++||+.+|||+... .+...++..+..++... + .+.++|+|++|+|++++.++
T Consensus 166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l 241 (325)
T PLN02989 166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKAL 241 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHh
Confidence 99999998874 468999999999999998642 24444555555665432 2 24578999999999999999
Q ss_pred cCCCCCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 204 ~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
.++.. ++.||+++ ..+|+.|+++.+.+.++.
T Consensus 242 ~~~~~-~~~~ni~~-~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 242 ETPSA-NGRYIIDG-PVVTIKDIENVLREFFPD 272 (325)
T ss_pred cCccc-CceEEEec-CCCCHHHHHHHHHHHCCC
Confidence 87654 45899954 579999999999999973
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-29 Score=213.15 Aligned_cols=224 Identities=17% Similarity=0.227 Sum_probs=167.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|+++.|+...... .... ........+++++.+|+++++.+.++++ ++|+|||+|
T Consensus 11 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~A 85 (322)
T PLN02986 11 TGASGYIASWIVKLLLLRGYTVKATVRDLTDRKK-TEHL--LALDGAKERLKLFKADLLEESSFEQAIE--GCDAVFHTA 85 (322)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHH-HHHH--HhccCCCCceEEEecCCCCcchHHHHHh--CCCEEEEeC
Confidence 7999999999999999999999999998765211 0000 0000012468999999999999999999 899999999
Q ss_pred cC---------------ChhcHHHHHHhCC---CCCcEEEeeccccc--cCC---CCCCCCCCCCCCC------Cc-cch
Q 022578 81 GR---------------EADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCETDTVDP------KS-RHK 130 (295)
Q Consensus 81 ~~---------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~--~~~---~~~~~~e~~~~~p------~~-~~~ 130 (295)
+. |+.++.+++++++ +++|||++||.++| +.. .+.+++|+....| .+ |..
T Consensus 86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~ 165 (322)
T PLN02986 86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL 165 (322)
T ss_pred CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence 74 2346788899876 57899999998764 332 2345667654433 23 459
Q ss_pred hhHHHHHHhh----hcCCcEEEeccCeeecCCCCC--chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 131 ~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+|..+|+++. +++++++++||+.+|||.... +....++..+..++.+ .+ ++.++++|++|+|++++.++.
T Consensus 166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~ 241 (322)
T PLN02986 166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALE 241 (322)
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhc
Confidence 9999998763 468999999999999997532 2233445555566643 23 456899999999999999998
Q ss_pred CCCCCCceEEecCCcccCHHHHHHHHHHHhC
Q 022578 205 NEKASRQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
++... ++||+++ +.+|+.|+++.+.+.++
T Consensus 242 ~~~~~-~~yni~~-~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 242 TPSAN-GRYIIDG-PIMSVNDIIDILRELFP 270 (322)
T ss_pred CcccC-CcEEEec-CCCCHHHHHHHHHHHCC
Confidence 86554 4899954 67999999999999986
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-29 Score=213.76 Aligned_cols=225 Identities=16% Similarity=0.177 Sum_probs=167.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|+...... ... .........+++++.+|+.|++.+..+++ ++|+|||+|
T Consensus 10 tGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A 84 (322)
T PLN02662 10 TGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK-TEH--LLALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVFHTA 84 (322)
T ss_pred ECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh-HHH--HHhccCCCCceEEEeccccCcchHHHHHc--CCCEEEEeC
Confidence 7999999999999999999999999998654210 000 00000012468999999999999999999 899999999
Q ss_pred cC---------------ChhcHHHHHHhCC---CCCcEEEeeccc--cccCC---CCCCCCCCCCCCC-------Cccch
Q 022578 81 GR---------------EADEVEPILDALP---NLEQFIYCSSAG--VYLKS---DLLPHCETDTVDP-------KSRHK 130 (295)
Q Consensus 81 ~~---------------~~~~~~~ll~~~~---~~~~~i~~Ss~~--v~~~~---~~~~~~e~~~~~p-------~~~~~ 130 (295)
+. |+.++.++++++. ++++||++||.+ +|++. ...+++|+.+..| ..|..
T Consensus 85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~ 164 (322)
T PLN02662 85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL 164 (322)
T ss_pred CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence 74 2456788999865 678999999986 36542 2345677765544 23559
Q ss_pred hhHHHHHHhh----hcCCcEEEeccCeeecCCCCC--chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 131 ~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+|..+|++++ +.+++++++||+.+|||+... .....++..+..++.. . +++.++++|++|+|++++.+++
T Consensus 165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~Dva~a~~~~~~ 240 (322)
T PLN02662 165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--F--PNASYRWVDVRDVANAHIQAFE 240 (322)
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--C--CCCCcCeEEHHHHHHHHHHHhc
Confidence 9999998863 569999999999999997532 2333344445455442 1 2467899999999999999998
Q ss_pred CCCCCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 205 NEKASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
.+... +.|++++ ..++++|+++.+.+.++.
T Consensus 241 ~~~~~-~~~~~~g-~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 241 IPSAS-GRYCLVE-RVVHYSEVVKILHELYPT 270 (322)
T ss_pred CcCcC-CcEEEeC-CCCCHHHHHHHHHHHCCC
Confidence 76443 4788874 679999999999998764
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=213.06 Aligned_cols=227 Identities=20% Similarity=0.250 Sum_probs=165.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|+++.|+......... .......++++++.+|++|.+++.++++ ++|+|||+|
T Consensus 15 tG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A 88 (338)
T PLN00198 15 IGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH----LRALQELGDLKIFGADLTDEESFEAPIA--GCDLVFHVA 88 (338)
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH----HHhcCCCCceEEEEcCCCChHHHHHHHh--cCCEEEEeC
Confidence 7999999999999999999999999988654211000 0000001358899999999999999998 899999999
Q ss_pred cC---------------ChhcHHHHHHhCC---CCCcEEEeeccccccCCC----CCCCCCCC---------CCCCCc-c
Q 022578 81 GR---------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETD---------TVDPKS-R 128 (295)
Q Consensus 81 ~~---------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~----~~~~~e~~---------~~~p~~-~ 128 (295)
+. |+.++.++++++. ++++||++||.++|+... +.+.+|+. +..|.+ |
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y 168 (338)
T PLN00198 89 TPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGY 168 (338)
T ss_pred CCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchh
Confidence 74 3345778898875 478999999999998532 23444532 223444 4
Q ss_pred chhhHHHHHHhh----hcCCcEEEeccCeeecCCCCC---chHHHHHHHHHcCCCcccCC-CCC----ceeeeeeHHHHH
Q 022578 129 HKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPG-SGI----QVTQLGHVKDLA 196 (295)
Q Consensus 129 ~~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~~~D~a 196 (295)
..+|..+|++++ ..+++++++||+++|||+... ..+ .++..+..++.+.+.+ ++. ..++++|++|+|
T Consensus 169 ~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a 247 (338)
T PLN00198 169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSL-SLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVC 247 (338)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcH-HHHHHHHcCCccccccccccccccCCcceeEHHHHH
Confidence 599999998774 468999999999999997532 122 2233455666655444 222 237999999999
Q ss_pred HHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 197 ~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
++++.++..+.. ++.| ++++..+++.|+++.+.+.++.
T Consensus 248 ~a~~~~~~~~~~-~~~~-~~~~~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 248 RAHIFLAEKESA-SGRY-ICCAANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred HHHHHHhhCcCc-CCcE-EEecCCCCHHHHHHHHHHHCCC
Confidence 999999887543 3467 4555778999999999998763
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=217.68 Aligned_cols=225 Identities=21% Similarity=0.227 Sum_probs=176.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC--CCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~ 78 (295)
|||||+||++++++|+++|++|++++|+..+...... .........+++++.+|++|++++.++++.. ++|+|||
T Consensus 66 tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~ 142 (390)
T PLN02657 66 VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNG---KEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVVVS 142 (390)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccch---hhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEEEE
Confidence 7999999999999999999999999998765221100 0001112357999999999999999999843 5999999
Q ss_pred cccC-----------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhh--cC
Q 022578 79 INGR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLES--KG 143 (295)
Q Consensus 79 ~a~~-----------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~--~~ 143 (295)
|++. |..++.+++++++ ++++||++||.++++. ...+..+|..+|+.++. .+
T Consensus 143 ~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p-------------~~~~~~sK~~~E~~l~~~~~g 209 (390)
T PLN02657 143 CLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP-------------LLEFQRAKLKFEAELQALDSD 209 (390)
T ss_pred CCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc-------------chHHHHHHHHHHHHHHhccCC
Confidence 9764 2346789999987 8889999999887521 11245889999998875 89
Q ss_pred CcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCcee-eeeeHHHHHHHHHHHhcCCCCCCceEEecCC-ccc
Q 022578 144 VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT-QLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYV 221 (295)
Q Consensus 144 ~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~-~~~ 221 (295)
++++|+||+.+|++ +..++..+..|+++.++|+++..+ ++||++|+|++++.++.++...+++||++++ +.+
T Consensus 210 l~~tIlRp~~~~~~------~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~ 283 (390)
T PLN02657 210 FTYSIVRPTAFFKS------LGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKAL 283 (390)
T ss_pred CCEEEEccHHHhcc------cHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCccc
Confidence 99999999999986 233456667788877778887654 6799999999999999876667889999986 689
Q ss_pred CHHHHHHHHHHHhCCCCCCCCcccccCCcc
Q 022578 222 TFDGLARACAKVTGLLDFRSLNLCTTTPKS 251 (295)
Q Consensus 222 t~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 251 (295)
|+.|+++.+.+.+|++ +++...+...
T Consensus 284 S~~Eia~~l~~~lG~~----~~~~~vp~~~ 309 (390)
T PLN02657 284 TPLEQGEMLFRILGKE----PKFFKVPIQI 309 (390)
T ss_pred CHHHHHHHHHHHhCCC----CceEEcCHHH
Confidence 9999999999999987 5555555433
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=206.37 Aligned_cols=219 Identities=20% Similarity=0.300 Sum_probs=171.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||+++++.|+++|++|++++|+++.... .. ..+++++.+|+.|.+++.++++ ++|+|||++
T Consensus 6 tG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a 72 (328)
T TIGR03466 6 TGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-LE----------GLDVEIVEGDLRDPASLRKAVA--GCRALFHVA 72 (328)
T ss_pred ECCccchhHHHHHHHHHCCCEEEEEEecCccccc-cc----------cCCceEEEeeCCCHHHHHHHHh--CCCEEEEec
Confidence 7999999999999999999999999998765321 11 1368899999999999999999 899999998
Q ss_pred cC--------------ChhcHHHHHHhCC--CCCcEEEeeccccccC-CCCCCCCCCCCCCCC---c-cchhhHHHHHHh
Q 022578 81 GR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPK---S-RHKGKLNTESVL 139 (295)
Q Consensus 81 ~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~p~---~-~~~~k~~~E~~~ 139 (295)
+. |+.++.++++++. +++++|++||..+|+. ..+.+.+|+.+..|. . |..+|..+|+++
T Consensus 73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~ 152 (328)
T TIGR03466 73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAA 152 (328)
T ss_pred eecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence 64 3456788899887 7889999999999985 345577887776553 2 448999999988
Q ss_pred hh----cCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEE
Q 022578 140 ES----KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214 (295)
Q Consensus 140 ~~----~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~ 214 (295)
+. .+++++++||+.+||++.... ....++.....+...... +...+++|++|+|++++.++.++. .+..|+
T Consensus 153 ~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~ 228 (328)
T TIGR03466 153 LEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGR-IGERYI 228 (328)
T ss_pred HHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCCC-CCceEE
Confidence 54 589999999999999986422 222333333343322222 234689999999999999998753 467787
Q ss_pred ecCCcccCHHHHHHHHHHHhCCC
Q 022578 215 ISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 215 i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++ ++.+++.|+++.+.+.+|.+
T Consensus 229 ~~-~~~~s~~e~~~~i~~~~g~~ 250 (328)
T TIGR03466 229 LG-GENLTLKQILDKLAEITGRP 250 (328)
T ss_pred ec-CCCcCHHHHHHHHHHHhCCC
Confidence 75 57899999999999999986
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-28 Score=210.75 Aligned_cols=226 Identities=18% Similarity=0.221 Sum_probs=162.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|+.......... ........+++++.+|++|.+.+.++++ ++|+|||+|
T Consensus 11 TGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~ViH~A 85 (351)
T PLN02650 11 TGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHL---LDLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVFHVA 85 (351)
T ss_pred eCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHH---HhccCCCCceEEEEecCCChhhHHHHHh--CCCEEEEeC
Confidence 79999999999999999999999999986542210000 0000001357899999999999999999 899999998
Q ss_pred cC---------------ChhcHHHHHHhCC--C-CCcEEEeeccccccCCC-CCC-CCCCCC---------CCCC-ccch
Q 022578 81 GR---------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLP-HCETDT---------VDPK-SRHK 130 (295)
Q Consensus 81 ~~---------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~-~~~-~~e~~~---------~~p~-~~~~ 130 (295)
+. |..++.+++++|. + +++|||+||.++|+... ..+ ++|+.. ..|. .|..
T Consensus 86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~ 165 (351)
T PLN02650 86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV 165 (351)
T ss_pred CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence 74 2346888999987 4 67999999998876532 223 456532 1122 3559
Q ss_pred hhHHHHHHhh----hcCCcEEEeccCeeecCCCCCchHHHHHHHH--HcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 131 ~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+|..+|.+++ +++++++++||+++|||+........++..+ ..+.... .+.. ..++|+|++|+|++++.++.
T Consensus 166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~r~~v~V~Dva~a~~~~l~ 243 (351)
T PLN02650 166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH-YSII-KQGQFVHLDDLCNAHIFLFE 243 (351)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc-cCcC-CCcceeeHHHHHHHHHHHhc
Confidence 9999998773 5689999999999999976432222222221 2233221 2222 34799999999999999998
Q ss_pred CCCCCCceEEecCCcccCHHHHHHHHHHHhC
Q 022578 205 NEKASRQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
++.. ++.| ++++..+++.|+++.+.+.++
T Consensus 244 ~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 244 HPAA-EGRY-ICSSHDATIHDLAKMLREKYP 272 (351)
T ss_pred CcCc-CceE-EecCCCcCHHHHHHHHHHhCc
Confidence 7544 3478 566677999999999999876
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-28 Score=216.68 Aligned_cols=236 Identities=14% Similarity=0.147 Sum_probs=173.9
Q ss_pred CCcCCcchHHHHHHHHHCC---CeEEEEecCCCccccC--CC-----CCCch--------hhh-hccCCeEEEEecCC--
Q 022578 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQ--LP-----GESDQ--------EFA-EFSSKILHLKGDRK-- 59 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~--~~-----~~~~~--------~~~-~~~~~v~~~~~D~~-- 59 (295)
||||||+|++|++.|++.+ .+|+++.|........ +. ..... .+. ....+++++.+|++
T Consensus 17 TGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~ 96 (491)
T PLN02996 17 TGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYD 96 (491)
T ss_pred eCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCc
Confidence 8999999999999999864 3789999977542110 00 00000 000 01157999999998
Q ss_pred -----ChHHHHHhhhcCCCcEEEEcccC-------------ChhcHHHHHHhCC---CCCcEEEeeccccccCCCC----
Q 022578 60 -----DYDFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL---- 114 (295)
Q Consensus 60 -----~~~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~---- 114 (295)
+.+.+..+++ ++|+|||+|+. |+.++.+++++|+ ++++|||+||.+|||...+
T Consensus 97 ~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E 174 (491)
T PLN02996 97 DLGVKDSNLREEMWK--EIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILE 174 (491)
T ss_pred CCCCChHHHHHHHHh--CCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeee
Confidence 4455677888 89999999985 5668999999886 5789999999999986432
Q ss_pred CCCCCCC------------------------------------------------CCCCCccchhhHHHHHHhhh--cCC
Q 022578 115 LPHCETD------------------------------------------------TVDPKSRHKGKLNTESVLES--KGV 144 (295)
Q Consensus 115 ~~~~e~~------------------------------------------------~~~p~~~~~~k~~~E~~~~~--~~~ 144 (295)
.++++.. ...|.+|..+|+.+|+++++ .++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~l 254 (491)
T PLN02996 175 KPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENL 254 (491)
T ss_pred ecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCC
Confidence 1111000 01244566999999999965 489
Q ss_pred cEEEeccCeeecCCCCC--c------hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--C-CCCceE
Q 022578 145 NWTSLRPVYIYGPLNYN--P------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--K-ASRQVF 213 (295)
Q Consensus 145 ~~~i~R~~~i~g~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~-~~~~~~ 213 (295)
+++|+||++||||++.. . ....++....+|....+++++++.++++|++|++++++.++... . ..+++|
T Consensus 255 pv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vY 334 (491)
T PLN02996 255 PLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIY 334 (491)
T ss_pred CEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEE
Confidence 99999999999987532 1 12334455566776667799999999999999999999998752 1 235799
Q ss_pred EecCC--cccCHHHHHHHHHHHhCCCC
Q 022578 214 NISGE--KYVTFDGLARACAKVTGLLD 238 (295)
Q Consensus 214 ~i~~~--~~~t~~e~~~~i~~~~g~~~ 238 (295)
|++++ .++|+.|+++.+.+.++..|
T Consensus 335 Ni~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 335 HVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred EecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 99998 88999999999999998763
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=207.58 Aligned_cols=224 Identities=21% Similarity=0.263 Sum_probs=165.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh------ccCCeEEEEecCCChHHHHHhhhcCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------FSSKILHLKGDRKDYDFVKSSLSAKGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~d 74 (295)
|||+||||++++++|+++|++|+++.|+.+.... +. .+.. ...+++++.+|++|.+++.++++ ++|
T Consensus 59 TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~-l~-----~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~~d 130 (367)
T PLN02686 59 TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEK-LR-----EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--GCA 130 (367)
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-----HHhhhccccccCCceEEEEcCCCCHHHHHHHHH--hcc
Confidence 7999999999999999999999998887543211 00 0000 01258899999999999999999 899
Q ss_pred EEEEcccC----------------ChhcHHHHHHhCC---CCCcEEEeecc--ccccCC--CC--CCCCCCC------CC
Q 022578 75 VVYDINGR----------------EADEVEPILDALP---NLEQFIYCSSA--GVYLKS--DL--LPHCETD------TV 123 (295)
Q Consensus 75 ~vi~~a~~----------------~~~~~~~ll~~~~---~~~~~i~~Ss~--~v~~~~--~~--~~~~e~~------~~ 123 (295)
.|||+++. |..++.+++++|. ++++|||+||. .+|+.. .. ..++|+. +.
T Consensus 131 ~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~ 210 (367)
T PLN02686 131 GVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCR 210 (367)
T ss_pred EEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcc
Confidence 99999764 3446888999975 68899999996 477642 11 2355543 22
Q ss_pred CCCc-cchhhHHHHHHhh----hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 124 DPKS-RHKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 124 ~p~~-~~~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
.|.+ |..+|..+|++++ ..+++++++||+++|||+........++ ....+. +.+++++. .+++|++|+|++
T Consensus 211 ~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~-~~~~g~-~~~~g~g~--~~~v~V~Dva~A 286 (367)
T PLN02686 211 DNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATI-AYLKGA-QEMLADGL--LATADVERLAEA 286 (367)
T ss_pred cccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHH-HHhcCC-CccCCCCC--cCeEEHHHHHHH
Confidence 3433 4499999999873 4689999999999999985322222222 333454 44555543 579999999999
Q ss_pred HHHHhcCC--CCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 199 FVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++.+++.. ...+++| +++++.+++.|+++.+.+.+|.+
T Consensus 287 ~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~ 326 (367)
T PLN02686 287 HVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLP 326 (367)
T ss_pred HHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCC
Confidence 99998742 2345678 88888999999999999999976
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=200.39 Aligned_cols=234 Identities=25% Similarity=0.338 Sum_probs=185.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++.+.+|++.|+.|.+++.-.......+.. ...+..-..++.++++|+.|.+.++++|+..++|.|+|+|
T Consensus 8 tGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r--~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa 85 (343)
T KOG1371|consen 8 TGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKR--VRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFA 85 (343)
T ss_pred ecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHH--HHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEeeh
Confidence 79999999999999999999999998665553222211 0000111267999999999999999999999999999998
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCC-CCccc-hhhHHHHHHhh
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRH-KGKLNTESVLE 140 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~-p~~~~-~~k~~~E~~~~ 140 (295)
+. |..++.++++.|+ +++++||+||+.|||.....|++|+.+.. |.+.| ++|...|+.+.
T Consensus 86 ~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~ 165 (343)
T KOG1371|consen 86 ALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIH 165 (343)
T ss_pred hhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHH
Confidence 75 5678999999998 99999999999999999999999999988 88776 99999999984
Q ss_pred ----hcCCcEEEeccCeeec--CCC---------CCchHHHHHHHHH--------cCCCcccCCCCCceeeeeeHHHHHH
Q 022578 141 ----SKGVNWTSLRPVYIYG--PLN---------YNPVEEWFFHRLK--------AGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 141 ----~~~~~~~i~R~~~i~g--~~~---------~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..++.++.+|.+.++| |.. .+++.+...+-+. -|.+... .+|+..++++|+-|.|+
T Consensus 166 d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t-~dgt~vrdyi~v~Dla~ 244 (343)
T KOG1371|consen 166 DYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTT-IDGTIVRDYIHVLDLAD 244 (343)
T ss_pred hhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccc-cCCCeeecceeeEehHH
Confidence 4568899999999999 421 1222222111111 1333333 35689999999999999
Q ss_pred HHHHHhcCCC--CCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
....++.... ..-++||++.+...+..+|+..++++.|++
T Consensus 245 ~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~ 286 (343)
T KOG1371|consen 245 GHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVK 286 (343)
T ss_pred HHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCC
Confidence 9999998643 234599999999999999999999999987
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=200.89 Aligned_cols=215 Identities=25% Similarity=0.268 Sum_probs=159.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||+++++.|+++|++|++++|++........ ..+ .|+.. +.+...+. ++|+|||++
T Consensus 4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~----~~~~~-~~~~~~~~--~~D~Vvh~a 65 (292)
T TIGR01777 4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EGY----KPWAP-LAESEALE--GADAVINLA 65 (292)
T ss_pred EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------eee----ecccc-cchhhhcC--CCCEEEECC
Confidence 7999999999999999999999999999876322110 111 12222 34556677 899999999
Q ss_pred cC------------------ChhcHHHHHHhCC--CC--CcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 81 GR------------------EADEVEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 81 ~~------------------~~~~~~~ll~~~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
+. |..++++++++++ ++ .+||+.|+..+|+.....+++|+.+..+.+++ ..+...|+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~ 145 (292)
T TIGR01777 66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEE 145 (292)
T ss_pred CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHH
Confidence 74 3445889999987 54 35777777788987767788888765555554 45555565
Q ss_pred Hh---hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEE
Q 022578 138 VL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214 (295)
Q Consensus 138 ~~---~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~ 214 (295)
.+ ++.+++++++||+.+|||... ....+........... +++++..++++|++|+|+++..+++++.. +++||
T Consensus 146 ~~~~~~~~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~-~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~ 221 (292)
T TIGR01777 146 AAQAAEDLGTRVVLLRTGIVLGPKGG--ALAKMLPPFRLGLGGP-LGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN 221 (292)
T ss_pred HhhhchhcCCceEEEeeeeEECCCcc--hhHHHHHHHhcCcccc-cCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence 54 346899999999999999642 2333332222221112 47788999999999999999999987554 46999
Q ss_pred ecCCcccCHHHHHHHHHHHhCCC
Q 022578 215 ISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 215 i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++++.+|+.|+++.+++.+|.+
T Consensus 222 ~~~~~~~s~~di~~~i~~~~g~~ 244 (292)
T TIGR01777 222 ATAPEPVRNKEFAKALARALHRP 244 (292)
T ss_pred ecCCCccCHHHHHHHHHHHhCCC
Confidence 99999999999999999999976
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=187.54 Aligned_cols=211 Identities=26% Similarity=0.297 Sum_probs=159.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+.+|.+.||+|++++|++.+....+. ..+. ..+.+.+.... ++|+|||+|
T Consensus 4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v~-------~~~~~~~~~~~-~~DavINLA 64 (297)
T COG1090 4 TGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNVT-------LWEGLADALTL-GIDAVINLA 64 (297)
T ss_pred eccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------cccc-------ccchhhhcccC-CCCEEEECC
Confidence 7999999999999999999999999999988543321 1221 22334444442 699999999
Q ss_pred cCCh------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 81 GREA------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 81 ~~~~------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
|.+. ..|+.|.+++. +.+.+|.-|.++.||.+....++|+++....... .++. -|+
T Consensus 65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~-WE~ 143 (297)
T COG1090 65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQD-WEE 143 (297)
T ss_pred CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHH-HHH
Confidence 9842 24677777754 6678888888899999999999999655443333 2222 232
Q ss_pred H-h--hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHc--CCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCce
Q 022578 138 V-L--ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212 (295)
Q Consensus 138 ~-~--~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ 212 (295)
. + +..|.+++++|.|+|.++.. +.+..++...+. |.++ |+|.++++|||++|++++|..++++.... +.
T Consensus 144 ~a~~a~~~gtRvvllRtGvVLs~~G--GaL~~m~~~fk~glGG~~---GsGrQ~~SWIhieD~v~~I~fll~~~~ls-Gp 217 (297)
T COG1090 144 EALQAQQLGTRVVLLRTGVVLSPDG--GALGKMLPLFKLGLGGKL---GSGRQWFSWIHIEDLVNAILFLLENEQLS-GP 217 (297)
T ss_pred HHhhhhhcCceEEEEEEEEEecCCC--cchhhhcchhhhccCCcc---CCCCceeeeeeHHHHHHHHHHHHhCcCCC-Cc
Confidence 2 2 45689999999999999853 334444433332 3333 99999999999999999999999997665 49
Q ss_pred EEecCCcccCHHHHHHHHHHHhCCC
Q 022578 213 FNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 213 ~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
||++.+.+++..++...+.+.+++|
T Consensus 218 ~N~taP~PV~~~~F~~al~r~l~RP 242 (297)
T COG1090 218 FNLTAPNPVRNKEFAHALGRALHRP 242 (297)
T ss_pred ccccCCCcCcHHHHHHHHHHHhCCC
Confidence 9999999999999999999999987
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-27 Score=218.38 Aligned_cols=226 Identities=20% Similarity=0.264 Sum_probs=169.1
Q ss_pred CCcCCcchHHHHHHHH--HCCCeEEEEecCCCccccCCCCCCchhhhh-c-cCCeEEEEecCCCh------HHHHHhhhc
Q 022578 1 MGGTRFIGVFLSRLLV--KEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDY------DFVKSSLSA 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~------~~~~~~~~~ 70 (295)
||||||||++|+++|+ +.|++|++++|++.... . ..+.. . ..+++++.+|++|+ +.+..+ +
T Consensus 6 TGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~--~-----~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~- 76 (657)
T PRK07201 6 TGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR--L-----EALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G- 76 (657)
T ss_pred eCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH--H-----HHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c-
Confidence 7999999999999999 47999999999654311 0 00001 1 14689999999984 455554 5
Q ss_pred CCCcEEEEcccC-------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCC---CCC-Cccchh
Q 022578 71 KGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT---VDP-KSRHKG 131 (295)
Q Consensus 71 ~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~---~~p-~~~~~~ 131 (295)
++|+|||||+. |+.++.+++++|+ ++++|||+||..+||...+ +.+|+.. ..+ ..|..+
T Consensus 77 -~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~s 154 (657)
T PRK07201 77 -DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRT 154 (657)
T ss_pred -CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHH
Confidence 99999999974 5668999999988 7899999999999986543 3444432 122 335699
Q ss_pred hHHHHHHhh-hcCCcEEEeccCeeecCCCCCc--------hHHHHHHHHHc-CCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 132 KLNTESVLE-SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 132 k~~~E~~~~-~~~~~~~i~R~~~i~g~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
|+++|++++ ..+++++++||+++||+...+. .+..++..... ...++.++.+....+++|++|+++++..
T Consensus 155 K~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~ 234 (657)
T PRK07201 155 KFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDH 234 (657)
T ss_pred HHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHH
Confidence 999999997 5789999999999999864221 11112222211 1123344556677899999999999999
Q ss_pred HhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 202 ~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++..+...+++||+++++.+++.|+++.+.+.+|.+
T Consensus 235 ~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~ 270 (657)
T PRK07201 235 LMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAP 270 (657)
T ss_pred HhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCC
Confidence 988766678899999999999999999999999987
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-27 Score=204.56 Aligned_cols=225 Identities=18% Similarity=0.214 Sum_probs=161.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|++........ .+. ...+++++.+|+++.+.+.++++ ++|+|||+|
T Consensus 16 tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A 87 (353)
T PLN02896 16 TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS-----KWK-EGDRLRLFRADLQEEGSFDEAVK--GCDGVFHVA 87 (353)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----hhc-cCCeEEEEECCCCCHHHHHHHHc--CCCEEEECC
Confidence 7999999999999999999999999987654211100 000 02468899999999999999998 899999999
Q ss_pred cCC-----------------------hhcHHHHHHhCC---CCCcEEEeeccccccCCC-----CCCCCCCCCC------
Q 022578 81 GRE-----------------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD-----LLPHCETDTV------ 123 (295)
Q Consensus 81 ~~~-----------------------~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~-----~~~~~e~~~~------ 123 (295)
+.. ..++.+++++|. ++++||++||.++||... ..+++|+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~ 167 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW 167 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence 751 135677888875 378999999999998532 1345665211
Q ss_pred ---CCC-ccchhhHHHHHHhh----hcCCcEEEeccCeeecCCCCCc---hHHHHHHHHHcCCCc--ccCCCC---Ccee
Q 022578 124 ---DPK-SRHKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPI--PIPGSG---IQVT 187 (295)
Q Consensus 124 ---~p~-~~~~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~~---~~~~~~~~~~~~~~~--~~~~~~---~~~~ 187 (295)
.+. .|..+|.++|+++. ..+++++++||+++|||+.... .+..+... ..|... ...+.. ...+
T Consensus 168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~ 246 (353)
T PLN02896 168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSP-ITGDSKLFSILSAVNSRMGSI 246 (353)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHH-hcCCccccccccccccccCce
Confidence 122 35599999999873 4689999999999999986432 12222221 234322 111111 1246
Q ss_pred eeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 188 ~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
+|+|++|+|++++.++..+.. ++.|++ ++..+++.|+++.+.+.++.
T Consensus 247 dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 247 ALVHIEDICDAHIFLMEQTKA-EGRYIC-CVDSYDMSELINHLSKEYPC 293 (353)
T ss_pred eEEeHHHHHHHHHHHHhCCCc-CccEEe-cCCCCCHHHHHHHHHHhCCC
Confidence 999999999999999986543 347754 56779999999999999873
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=193.84 Aligned_cols=228 Identities=19% Similarity=0.240 Sum_probs=181.4
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||+|.+++++|++.+ .+|++++..+.... ... .........++++.+|+.|...+..++. ++ .|+|
T Consensus 10 tGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~----e~~~~~~~~v~~~~~D~~~~~~i~~a~~--~~-~Vvh 81 (361)
T KOG1430|consen 10 TGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPA----ELTGFRSGRVTVILGDLLDANSISNAFQ--GA-VVVH 81 (361)
T ss_pred ECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cch----hhhcccCCceeEEecchhhhhhhhhhcc--Cc-eEEE
Confidence 7999999999999999997 89999998886411 110 0000013679999999999999999999 88 7887
Q ss_pred cccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCC-CCCCCCCCCCCC--ccc-hhhHHHH
Q 022578 79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPHCETDTVDPK--SRH-KGKLNTE 136 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~-~~~~e~~~~~p~--~~~-~~k~~~E 136 (295)
|++. |+.+|.+++++|. +++++||+||..|..+... ...+|+.+.... ..| .+|+.+|
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 7664 7889999999998 9999999999999876544 334455443222 244 9999999
Q ss_pred HHhhhc----CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc-----CCC
Q 022578 137 SVLESK----GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG-----NEK 207 (295)
Q Consensus 137 ~~~~~~----~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~-----~~~ 207 (295)
+++++. ++..+++||+.||||++.. ..+.+...+..|......++++...++++++.++.+.+.+.. .+.
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~-~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~ 240 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGDKR-LLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPS 240 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCCcc-ccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCc
Confidence 998643 3789999999999998743 456677888888887777888899999999998888776542 355
Q ss_pred CCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 208 ASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 208 ~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
..|+.|+|.+++++...+++..+.+.+|.+
T Consensus 241 ~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~ 270 (361)
T KOG1430|consen 241 VNGQFYFITDDTPVRFFDFLSPLVKALGYC 270 (361)
T ss_pred cCceEEEEeCCCcchhhHHHHHHHHhcCCC
Confidence 679999999999998888888999999988
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=195.36 Aligned_cols=212 Identities=20% Similarity=0.262 Sum_probs=163.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----CC-CcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KG-FDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~-~d~ 75 (295)
|||||++|++++++|+++|++|++++|++++.. ..+++.+.+|+.|++++..+++. .+ +|.
T Consensus 5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~ 70 (285)
T TIGR03649 5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA 70 (285)
T ss_pred EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence 799999999999999999999999999987631 14677889999999999999931 26 999
Q ss_pred EEEcccCC---hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhc-CCcEEEe
Q 022578 76 VYDINGRE---ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK-GVNWTSL 149 (295)
Q Consensus 76 vi~~a~~~---~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~-~~~~~i~ 149 (295)
|||+++.. .....+++++++ +++|||++||..++.. ...+...|+++++. +++++++
T Consensus 71 v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-----------------~~~~~~~~~~l~~~~gi~~til 133 (285)
T TIGR03649 71 VYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKG-----------------GPAMGQVHAHLDSLGGVEYTVL 133 (285)
T ss_pred EEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCC-----------------CchHHHHHHHHHhccCCCEEEE
Confidence 99998752 346788999987 9999999998765311 01234567788775 9999999
Q ss_pred ccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHH
Q 022578 150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229 (295)
Q Consensus 150 R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~ 229 (295)
||+++|++.... .....+.....+. .+.++..+++++++|+|++++.++.++...++.|++++++.+|+.|+++.
T Consensus 134 Rp~~f~~~~~~~----~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~ 208 (285)
T TIGR03649 134 RPTWFMENFSEE----FHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEI 208 (285)
T ss_pred eccHHhhhhccc----ccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHH
Confidence 999998763111 1112222333333 34567889999999999999999998766678999999999999999999
Q ss_pred HHHHhCCCCCCCCcccccCCccc
Q 022578 230 CAKVTGLLDFRSLNLCTTTPKSL 252 (295)
Q Consensus 230 i~~~~g~~~~~~~~~~~~~~~~~ 252 (295)
+++.+|++ ......+...+
T Consensus 209 l~~~~g~~----v~~~~~~~~~~ 227 (285)
T TIGR03649 209 LSRVLGRK----ITHVKLTEEEL 227 (285)
T ss_pred HHHHhCCc----eEEEeCCHHHH
Confidence 99999998 55555555433
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=191.99 Aligned_cols=208 Identities=17% Similarity=0.231 Sum_probs=162.1
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++| ++|++++|+......... .+ ...+++++.+|++|.+.+.++++ ++|+|||
T Consensus 10 TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-----~~--~~~~~~~v~~Dl~d~~~l~~~~~--~iD~Vih 80 (324)
T TIGR03589 10 TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQ-----KF--PAPCLRFFIGDVRDKERLTRALR--GVDYVVH 80 (324)
T ss_pred eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHH-----Hh--CCCcEEEEEccCCCHHHHHHHHh--cCCEEEE
Confidence 7999999999999999986 789999987654211000 00 01468899999999999999998 8999999
Q ss_pred cccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cchhhHHHHHHh
Q 022578 79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVL 139 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~~k~~~E~~~ 139 (295)
+||. |..++.++++++. ++++||++||...+ .|.+ |..+|+.+|.++
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~--------------~p~~~Y~~sK~~~E~l~ 146 (324)
T TIGR03589 81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA--------------NPINLYGATKLASDKLF 146 (324)
T ss_pred CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC--------------CCCCHHHHHHHHHHHHH
Confidence 9985 2346888999987 77899999986421 2333 559999999887
Q ss_pred h-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCc
Q 022578 140 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211 (295)
Q Consensus 140 ~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~ 211 (295)
+ ..+++++++|||++|||+. .+++.+...+..+. ++++ +++++.++|+|++|++++++.++++.. .++
T Consensus 147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~-~~~ 222 (324)
T TIGR03589 147 VAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML-GGE 222 (324)
T ss_pred HHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC-CCC
Confidence 3 3689999999999999964 45666777666675 4555 467888999999999999999998642 356
Q ss_pred eEEecCCcccCHHHHHHHHHHHhCC
Q 022578 212 VFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 212 ~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
+| ++.+..+++.|+++.+.+....
T Consensus 223 ~~-~~~~~~~sv~el~~~i~~~~~~ 246 (324)
T TIGR03589 223 IF-VPKIPSMKITDLAEAMAPECPH 246 (324)
T ss_pred EE-ccCCCcEEHHHHHHHHHhhCCe
Confidence 77 4566679999999999997654
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=189.25 Aligned_cols=219 Identities=16% Similarity=0.167 Sum_probs=159.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCcccc--CCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++||+|++++|+...... .+. .+.....+++++.+|++|.+++.+++. ++|.|+|
T Consensus 12 TGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~~ 84 (297)
T PLN02583 12 MDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIR-----GLSCEEERLKVFDVDPLDYHSILDALK--GCSGLFC 84 (297)
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHH-----hcccCCCceEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence 7999999999999999999999999986433110 000 000001368899999999999999999 9999999
Q ss_pred cccC--------------ChhcHHHHHHhCC---CCCcEEEeeccccccC--C---CCCCCCCCCCCCCC-------ccc
Q 022578 79 INGR--------------EADEVEPILDALP---NLEQFIYCSSAGVYLK--S---DLLPHCETDTVDPK-------SRH 129 (295)
Q Consensus 79 ~a~~--------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~--~---~~~~~~e~~~~~p~-------~~~ 129 (295)
+++. |..++.++++++. +++++|++||..++.. . ...+++|+.+..+. .|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 7643 3457899999976 4789999999876531 1 22356666543222 244
Q ss_pred hhhHHHHHHhh----hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 130 ~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
.+|..+|+++. ..+++++++||+++|||+..... . ...+.. ...++ ...+++|++|+|++++.++++
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~-~-----~~~~~~-~~~~~--~~~~~v~V~Dva~a~~~al~~ 235 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN-P-----YLKGAA-QMYEN--GVLVTVDVNFLVDAHIRAFED 235 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch-h-----hhcCCc-ccCcc--cCcceEEHHHHHHHHHHHhcC
Confidence 89999999873 46899999999999999753211 1 122222 12222 346799999999999999997
Q ss_pred CCCCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 206 EKASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 206 ~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
+...+ +|.++++....+.++++.+.+.+..
T Consensus 236 ~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 236 VSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred cccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence 66544 8888887655678899999998764
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-25 Score=193.97 Aligned_cols=232 Identities=19% Similarity=0.220 Sum_probs=163.8
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCcccc--CCCCCCch-hh--hhcc-CCeEEEEecCCCh------HHHHH
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQ--QLPGESDQ-EF--AEFS-SKILHLKGDRKDY------DFVKS 66 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~~~-~~--~~~~-~~v~~~~~D~~~~------~~~~~ 66 (295)
||||||+|++++++|+++| ++|+++.|..+.... .+...... .+ .... .+++++.+|++++ +.+..
T Consensus 5 tGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~ 84 (367)
T TIGR01746 5 TGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWER 84 (367)
T ss_pred eccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHH
Confidence 7999999999999999998 679999998763110 00000000 00 0001 4799999998754 56677
Q ss_pred hhhcCCCcEEEEcccC-------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCC------C
Q 022578 67 SLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD------P 125 (295)
Q Consensus 67 ~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~------p 125 (295)
+.+ ++|+|||+++. |+.++.++++++. +.++||++||.++|+.....+..|+++.. .
T Consensus 85 ~~~--~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (367)
T TIGR01746 85 LAE--NVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLA 162 (367)
T ss_pred HHh--hCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccC
Confidence 777 99999999874 5667899999987 67789999999999864433333433221 1
Q ss_pred CccchhhHHHHHHhhh---cCCcEEEeccCeeecCCCCC-----chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~~---~~~~~~i~R~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+.+|++++. .|++++++|||.+||+...+ ..+..++......... +.......++++++|+++
T Consensus 163 ~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~vddva~ 240 (367)
T TIGR01746 163 GGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY--PDSPELTEDLTPVDYVAR 240 (367)
T ss_pred CChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC--CCCCccccCcccHHHHHH
Confidence 2355999999998854 48999999999999974321 1222333333222222 222223568999999999
Q ss_pred HHHHHhcCCCC--CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 198 AFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 198 ~i~~~~~~~~~--~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++.++.++.. .+++||+++++.+++.|+++.+.+ .|.+
T Consensus 241 ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~ 281 (367)
T TIGR01746 241 AIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYN 281 (367)
T ss_pred HHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCC
Confidence 99999877543 278999999999999999999999 8876
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=178.82 Aligned_cols=215 Identities=23% Similarity=0.303 Sum_probs=181.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|||||+|+++++.|.+.|.+|++-.|..+.....++.+.+ ...+-+...|+.|+++++++++ ..++|||+.
T Consensus 67 FGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd------LGQvl~~~fd~~DedSIr~vvk--~sNVVINLI 138 (391)
T KOG2865|consen 67 FGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD------LGQVLFMKFDLRDEDSIRAVVK--HSNVVINLI 138 (391)
T ss_pred ecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc------ccceeeeccCCCCHHHHHHHHH--hCcEEEEee
Confidence 69999999999999999999999999998775544432111 3568899999999999999999 999999998
Q ss_pred cC------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcE
Q 022578 81 GR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNW 146 (295)
Q Consensus 81 ~~------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~ 146 (295)
|. |+.+.++|+..|+ |+.|||++|+.+.- ...++.+.++|+++|..+++.-.+.
T Consensus 139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan------------v~s~Sr~LrsK~~gE~aVrdafPeA 206 (391)
T KOG2865|consen 139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN------------VKSPSRMLRSKAAGEEAVRDAFPEA 206 (391)
T ss_pred ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc------------ccChHHHHHhhhhhHHHHHhhCCcc
Confidence 86 5668899999998 99999999987631 2233445599999999999998999
Q ss_pred EEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCC-ceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHH
Q 022578 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI-QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG 225 (295)
Q Consensus 147 ~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e 225 (295)
+|+||+.+||..+ .+++.+.-..++-..+++++.|+ ..-+++++-|+|++|+.+++++...|++|.++|+...+..|
T Consensus 207 tIirPa~iyG~eD--rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~e 284 (391)
T KOG2865|consen 207 TIIRPADIYGTED--RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSE 284 (391)
T ss_pred eeechhhhcccch--hHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHHH
Confidence 9999999999865 45666665566666777776663 55789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCC
Q 022578 226 LARACAKVTGLL 237 (295)
Q Consensus 226 ~~~~i~~~~g~~ 237 (295)
+++.+.+.....
T Consensus 285 Lvd~my~~~~~~ 296 (391)
T KOG2865|consen 285 LVDIMYDMAREW 296 (391)
T ss_pred HHHHHHHHHhhc
Confidence 999999988765
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=207.05 Aligned_cols=188 Identities=24% Similarity=0.346 Sum_probs=154.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|+.... . ..+++++.+|++|.+.+.++++ ++|+|||+|
T Consensus 6 TGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----------~~~v~~v~gDL~D~~~l~~al~--~vD~VVHlA 69 (854)
T PRK05865 6 TGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----------PSSADFIAADIRDATAVESAMT--GADVVAHCA 69 (854)
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----------ccCceEEEeeCCCHHHHHHHHh--CCCEEEECC
Confidence 79999999999999999999999999975431 1 1368899999999999999999 899999999
Q ss_pred cC-------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEecc
Q 022578 81 GR-------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP 151 (295)
Q Consensus 81 ~~-------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R~ 151 (295)
+. |..++.+++++|+ ++++||++||.. |..+|+++++++++++++||
T Consensus 70 a~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------K~aaE~ll~~~gl~~vILRp 125 (854)
T PRK05865 70 WVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------QPRVEQMLADCGLEWVAVRC 125 (854)
T ss_pred CcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------HHHHHHHHHHcCCCEEEEEe
Confidence 75 4567899999987 788999999853 78899999889999999999
Q ss_pred CeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHH
Q 022578 152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA 231 (295)
Q Consensus 152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~ 231 (295)
+++|||+. ..++..+.. .++...|++++.++++|++|+|+++..++..+...+++||+++++.+|+.|+++.+.
T Consensus 126 ~~VYGP~~-----~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~ 199 (854)
T PRK05865 126 ALIFGRNV-----DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALG 199 (854)
T ss_pred ceEeCCCh-----HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHh
Confidence 99999962 222333222 222223555677899999999999999987654456799999999999999999998
Q ss_pred HHh
Q 022578 232 KVT 234 (295)
Q Consensus 232 ~~~ 234 (295)
+..
T Consensus 200 ~~~ 202 (854)
T PRK05865 200 RPM 202 (854)
T ss_pred hhh
Confidence 753
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-24 Score=181.52 Aligned_cols=197 Identities=15% Similarity=0.149 Sum_probs=150.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|+... .|+.+.+.+...++..++|+|||+|
T Consensus 15 tG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------------~~~~~~~~v~~~l~~~~~D~ViH~A 65 (298)
T PLN02778 15 YGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------------GRLENRASLEADIDAVKPTHVFNAA 65 (298)
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEec-----------------------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence 79999999999999999999987421 1234556677777767899999999
Q ss_pred cC-------------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCC------CCCCCCCCCCC-CCc-cchh
Q 022578 81 GR-------------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD------LLPHCETDTVD-PKS-RHKG 131 (295)
Q Consensus 81 ~~-------------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~------~~~~~e~~~~~-p~~-~~~~ 131 (295)
+. |+.++.+++++|+ ++ +++++||.++|+... +.+++|++++. |.+ |..+
T Consensus 66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~s 144 (298)
T PLN02778 66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKT 144 (298)
T ss_pred cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHH
Confidence 75 2336889999998 66 577788888887532 23467766554 434 4499
Q ss_pred hHHHHHHhhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCc
Q 022578 132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211 (295)
Q Consensus 132 k~~~E~~~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~ 211 (295)
|.++|.+++.+. +..++|++..++++.. ....++..+..++.+...+ .+++|++|++++++.++..+. ++
T Consensus 145 K~~~E~~~~~y~-~~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~--~g 214 (298)
T PLN02778 145 KAMVEELLKNYE-NVCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL--TG 214 (298)
T ss_pred HHHHHHHHHHhh-ccEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC--CC
Confidence 999999998764 6788999888886532 1234667777776654332 268999999999999987643 36
Q ss_pred eEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 212 VFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 212 ~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+||+++++.+|+.|+++.+++.+|.+
T Consensus 215 ~yNigs~~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 215 IYNFTNPGVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred eEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 99999999999999999999999953
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-25 Score=180.76 Aligned_cols=214 Identities=20% Similarity=0.291 Sum_probs=159.3
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhc--cCCeE----EEEecCCChHHHHHhhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKIL----HLKGDRKDYDFVKSSLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~----~~~~D~~~~~~~~~~~~~~~~ 73 (295)
|||+|.||+.|+++|++.+ .++++++|+..+..... .++... ..+++ .+.+|++|.+.+..+++.++|
T Consensus 4 TGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~-----~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 4 TGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELE-----RELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP 78 (293)
T ss_dssp ETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHH-----HHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred EccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHH-----HHHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence 7999999999999999986 58999999987732111 111111 12343 458899999999999999999
Q ss_pred cEEEEcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc-chhhHH
Q 022578 74 DVVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLN 134 (295)
Q Consensus 74 d~vi~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~-~~~k~~ 134 (295)
|+|||+|+. |+.++.|++++|. ++++||++||.-. .+|.+- +.+|..
T Consensus 79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~PtnvmGatKrl 144 (293)
T PF02719_consen 79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPTNVMGATKRL 144 (293)
T ss_dssp SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS--SHHHHHHHH
T ss_pred CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCCcHHHHHHHH
Confidence 999999997 6778999999987 9999999999764 346665 599999
Q ss_pred HHHHhhhc-------CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 022578 135 TESVLESK-------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 207 (295)
Q Consensus 135 ~E~~~~~~-------~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 207 (295)
+|.++... +..++++|+|+|.|.. +..++.|.+++.+|+|+++ .+.+..|-|+.++++++.++.++....
T Consensus 145 aE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~--GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~ 221 (293)
T PF02719_consen 145 AEKLVQAANQYSGNSDTKFSSVRFGNVLGSR--GSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAK 221 (293)
T ss_dssp HHHHHHHHCCTSSSS--EEEEEEE-EETTGT--TSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH--
T ss_pred HHHHHHHHhhhCCCCCcEEEEEEecceecCC--CcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCC
Confidence 99998532 4689999999999974 4668899999999999987 577899999999999999999987643
Q ss_pred CCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 208 ASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 208 ~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.|++|.+.-++++++.|+++.+.+..|..
T Consensus 222 -~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 222 -GGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp -TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred -CCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 47899999999999999999999999965
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=171.66 Aligned_cols=175 Identities=32% Similarity=0.479 Sum_probs=139.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||||++|+.++++|+++|++|++++|++++... ..+++++.+|+.|++++.++++ ++|+||+++
T Consensus 4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~ 68 (183)
T PF13460_consen 4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALK--GADAVIHAA 68 (183)
T ss_dssp ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHT--TSSEEEECC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhh--hcchhhhhh
Confidence 6999999999999999999999999999887443 2689999999999999999999 999999999
Q ss_pred cCC---hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEeccCeee
Q 022578 81 GRE---ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY 155 (295)
Q Consensus 81 ~~~---~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R~~~i~ 155 (295)
+.. ....++++++++ +++|+|++|+.++|+....... ......+..++..|..+|+.+++.+++|+++||+.+|
T Consensus 69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~ 147 (183)
T PF13460_consen 69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFS-DEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIY 147 (183)
T ss_dssp HSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEE-GGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEE
T ss_pred hhhcccccccccccccccccccccceeeeccccCCCCCcccc-cccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeE
Confidence 853 456888999987 8999999999999875433211 1111222345688889999999999999999999999
Q ss_pred cCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
|+.... ..+ +...+....++|+.+|+|++++.++++
T Consensus 148 ~~~~~~-------------~~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 148 GNPSRS-------------YRL-IKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp BTTSSS-------------EEE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred eCCCcc-------------eeE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 985321 111 111344556999999999999998863
|
... |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=182.77 Aligned_cols=215 Identities=20% Similarity=0.285 Sum_probs=181.6
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
|||+|-||+.+++++++.+ -+++.++|+..+.... ..++... ..++.++.||+.|.+.+..+++.++||+||
T Consensus 256 TGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i-----~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf 330 (588)
T COG1086 256 TGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLI-----DMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF 330 (588)
T ss_pred eCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHH-----HHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence 7999999999999999986 5888899988773211 1112221 257889999999999999999988899999
Q ss_pred EcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc-chhhHHHHHH
Q 022578 78 DINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESV 138 (295)
Q Consensus 78 ~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~-~~~k~~~E~~ 138 (295)
|+|+. |+-|+.|++++|. ++++||++||.-+ .+|.+- +.+|..+|..
T Consensus 331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA--------------V~PtNvmGaTKr~aE~~ 396 (588)
T COG1086 331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA--------------VNPTNVMGATKRLAEKL 396 (588)
T ss_pred EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc--------------cCCchHhhHHHHHHHHH
Confidence 99986 6779999999987 9999999999764 456665 5999999998
Q ss_pred hhhc-------CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCc
Q 022578 139 LESK-------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211 (295)
Q Consensus 139 ~~~~-------~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~ 211 (295)
+... +-.++++|+|+|.|.. +..++.|.+.+.+|+++++ .+++-.+-|+.+.|.++.++++.... ..|+
T Consensus 397 ~~a~~~~~~~~~T~f~~VRFGNVlGSr--GSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~-~gGe 472 (588)
T COG1086 397 FQAANRNVSGTGTRFCVVRFGNVLGSR--GSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIA-KGGE 472 (588)
T ss_pred HHHHhhccCCCCcEEEEEEecceecCC--CCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhc-CCCc
Confidence 8432 3789999999999985 4568889999999999987 68899999999999999999998875 3488
Q ss_pred eEEecCCcccCHHHHHHHHHHHhCCCC
Q 022578 212 VFNISGEKYVTFDGLARACAKVTGLLD 238 (295)
Q Consensus 212 ~~~i~~~~~~t~~e~~~~i~~~~g~~~ 238 (295)
+|.+.-|+++++.|+++.+.+..|..+
T Consensus 473 ifvldMGepvkI~dLAk~mi~l~g~~~ 499 (588)
T COG1086 473 IFVLDMGEPVKIIDLAKAMIELAGQTP 499 (588)
T ss_pred EEEEcCCCCeEHHHHHHHHHHHhCCCC
Confidence 999999999999999999999998553
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-23 Score=163.71 Aligned_cols=234 Identities=20% Similarity=0.179 Sum_probs=187.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||-||+-|++|++.|+++||.|+++.|+.+......-...... .....++.++.+|++|...+..+++...||.|+|++
T Consensus 8 TGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~-~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLa 86 (345)
T COG1089 8 TGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDP-HLNDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLA 86 (345)
T ss_pred ecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccc-ccCCceeEEEeccccchHHHHHHHHhcCchhheecc
Confidence 7999999999999999999999999999766432210100000 111245889999999999999999999999999998
Q ss_pred cC----------------ChhcHHHHHHhCC--C--CCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 81 GR----------------EADEVEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
+. +..++.+|+|+++ + ..||.+.||+..||.....|.+|..|..|.+.| .+|..+-.+.
T Consensus 87 AQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~t 166 (345)
T COG1089 87 AQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWIT 166 (345)
T ss_pred ccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHhee
Confidence 86 2347999999988 3 469999999999999999999999999999887 8888876554
Q ss_pred ----hhcCCcEEEeccCeeecCCCCCch----HHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 022578 140 ----ESKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210 (295)
Q Consensus 140 ----~~~~~~~~i~R~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 210 (295)
..+|+-.|.-+..+.-+|.....| +..-+.+++.|.. ....|+-+..++|-|..|.+++++.+++++. +
T Consensus 167 vNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~--P 244 (345)
T COG1089 167 VNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE--P 244 (345)
T ss_pred eehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC--C
Confidence 467888888888888888764333 3333344555543 2334889999999999999999999999865 5
Q ss_pred ceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
..|.++.++..|.+|+++.-.+..|.+
T Consensus 245 ddyViATg~t~sVrefv~~Af~~~g~~ 271 (345)
T COG1089 245 DDYVIATGETHSVREFVELAFEMVGID 271 (345)
T ss_pred CceEEecCceeeHHHHHHHHHHHcCce
Confidence 799999999999999999999999965
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-23 Score=186.16 Aligned_cols=234 Identities=17% Similarity=0.158 Sum_probs=164.6
Q ss_pred CCcCCcchHHHHHHHHHCCC---eEEEEecCCCccc--cCC-----CCCCchhhhh---------ccCCeEEEEecCCCh
Q 022578 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIA--QQL-----PGESDQEFAE---------FSSKILHLKGDRKDY 61 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~~-----~~~~~~~~~~---------~~~~v~~~~~D~~~~ 61 (295)
||||||+|..|++.|++.+. +|+++.|...... +.+ .......+.+ ...++.++.+|++++
T Consensus 125 TGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~ 204 (605)
T PLN02503 125 TGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCES 204 (605)
T ss_pred cCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCc
Confidence 89999999999999998753 7899999765421 111 0000000000 135789999999986
Q ss_pred ------HHHHHhhhcCCCcEEEEcccC-------------ChhcHHHHHHhCC---CCCcEEEeeccccccCCCC----C
Q 022578 62 ------DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----L 115 (295)
Q Consensus 62 ------~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~----~ 115 (295)
+..+.+.+ ++|+|||+|+. |+.++.+++++|+ +.++|||+||..|||...+ .
T Consensus 205 ~LGLs~~~~~~L~~--~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~ 282 (605)
T PLN02503 205 NLGLEPDLADEIAK--EVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEK 282 (605)
T ss_pred ccCCCHHHHHHHHh--cCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeee
Confidence 45566666 79999999986 5668999999885 5678999999999986531 1
Q ss_pred CCC-----------------------------------CC--C------------------CCCCCccchhhHHHHHHhh
Q 022578 116 PHC-----------------------------------ET--D------------------TVDPKSRHKGKLNTESVLE 140 (295)
Q Consensus 116 ~~~-----------------------------------e~--~------------------~~~p~~~~~~k~~~E~~~~ 140 (295)
+++ +. . ..-|.+|..+|+++|++++
T Consensus 283 ~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~ 362 (605)
T PLN02503 283 PFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVIN 362 (605)
T ss_pred ecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHH
Confidence 221 00 0 0123455699999999996
Q ss_pred hc--CCcEEEeccCee----------ecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC---
Q 022578 141 SK--GVNWTSLRPVYI----------YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN--- 205 (295)
Q Consensus 141 ~~--~~~~~i~R~~~i----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~--- 205 (295)
+. +++++|+||+.| |+++... ..+.+ ....+|..-.++++++...+.|++|.++++++.++..
T Consensus 363 ~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~-~~p~~-~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~ 440 (605)
T PLN02503 363 SMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRM-MDPIV-LYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGG 440 (605)
T ss_pred HhcCCCCEEEEcCCEecccccCCccccccCccc-cchhh-hheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhc
Confidence 54 799999999999 4443211 11111 1223554434668999999999999999999988431
Q ss_pred -CCCCCceEEecCC--cccCHHHHHHHHHHHhCCCC
Q 022578 206 -EKASRQVFNISGE--KYVTFDGLARACAKVTGLLD 238 (295)
Q Consensus 206 -~~~~~~~~~i~~~--~~~t~~e~~~~i~~~~g~~~ 238 (295)
....+.+||++++ +++++.++.+.+.+.+...|
T Consensus 441 ~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P 476 (605)
T PLN02503 441 AAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSP 476 (605)
T ss_pred ccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCC
Confidence 1124689999988 89999999999999887653
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=174.03 Aligned_cols=197 Identities=21% Similarity=0.209 Sum_probs=116.5
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccc--c----CCCCCCchh-h-hhccCCeEEEEecCCCh------HHH
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIA--Q----QLPGESDQE-F-AEFSSKILHLKGDRKDY------DFV 64 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~----~~~~~~~~~-~-~~~~~~v~~~~~D~~~~------~~~ 64 (295)
||||||+|++|+++|++.+. +|+++.|..+... + .+....... . .....+++++.||++++ +.+
T Consensus 2 TGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~ 81 (249)
T PF07993_consen 2 TGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDY 81 (249)
T ss_dssp E-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHH
T ss_pred cCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHh
Confidence 79999999999999999876 9999999875411 1 111100000 0 12357999999999875 567
Q ss_pred HHhhhcCCCcEEEEcccC-------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCC------CCCCC--
Q 022578 65 KSSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP------HCETD-- 121 (295)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~------~~e~~-- 121 (295)
..+.+ ++|+|||+|+. |+.+++++++.|. +.++|+|+||..+.+...+.. ..+..
T Consensus 82 ~~L~~--~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~ 159 (249)
T PF07993_consen 82 QELAE--EVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLD 159 (249)
T ss_dssp HHHHH--H--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE
T ss_pred hcccc--ccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccch
Confidence 77777 99999999986 6889999999988 556999999955544433211 01111
Q ss_pred --CCCCCccchhhHHHHHHhhh----cCCcEEEeccCeeecCCC-----CCc-hHHHHHHHHHcCCCcccCCCCCceeee
Q 022578 122 --TVDPKSRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLN-----YNP-VEEWFFHRLKAGRPIPIPGSGIQVTQL 189 (295)
Q Consensus 122 --~~~p~~~~~~k~~~E~~~~~----~~~~~~i~R~~~i~g~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
...+..|..+|+.+|+++++ .|++++|+|||.|+|... ... ....+...+..|.....+++.+...++
T Consensus 160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~ 239 (249)
T PF07993_consen 160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDL 239 (249)
T ss_dssp --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--E
T ss_pred hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeE
Confidence 11223355999999999953 399999999999999432 223 333344444555544455666667999
Q ss_pred eeHHHHHHHH
Q 022578 190 GHVKDLARAF 199 (295)
Q Consensus 190 i~~~D~a~~i 199 (295)
+++|.+|++|
T Consensus 240 vPVD~va~aI 249 (249)
T PF07993_consen 240 VPVDYVARAI 249 (249)
T ss_dssp EEHHHHHHHH
T ss_pred ECHHHHHhhC
Confidence 9999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=172.38 Aligned_cols=212 Identities=22% Similarity=0.332 Sum_probs=157.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||||.+|+.+++.|++.+++|++++|++++.... .-...+++++.+|+.|++++.++|+ ++|+||.+.
T Consensus 4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~---------~l~~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~~ 72 (233)
T PF05368_consen 4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQ---------QLQALGAEVVEADYDDPESLVAALK--GVDAVFSVT 72 (233)
T ss_dssp ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHH---------HHHHTTTEEEES-TT-HHHHHHHHT--TCSEEEEES
T ss_pred ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhh---------hhhcccceEeecccCCHHHHHHHHc--CCceEEeec
Confidence 69999999999999999999999999998542110 1112578999999999999999999 999999988
Q ss_pred cCC----hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCC-ccchhhHHHHHHhhhcCCcEEEeccCe
Q 022578 81 GRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVLESKGVNWTSLRPVY 153 (295)
Q Consensus 81 ~~~----~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~~~~~k~~~E~~~~~~~~~~~i~R~~~ 153 (295)
+.. .....+++++++ ++++||+.|....+. +.....|. ..+..|...|+++++.+++++++|||.
T Consensus 73 ~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~ 144 (233)
T PF05368_consen 73 PPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGF 144 (233)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-E
T ss_pred CcchhhhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhhhhhccccceeccccc
Confidence 743 456889999998 999999866554431 12222232 245889999999999999999999998
Q ss_pred eecCCCCCchHHHHHH--HHHcCC-CcccCCCCCceeeee-eHHHHHHHHHHHhcCCCCC--CceEEecCCcccCHHHHH
Q 022578 154 IYGPLNYNPVEEWFFH--RLKAGR-PIPIPGSGIQVTQLG-HVKDLARAFVQVLGNEKAS--RQVFNISGEKYVTFDGLA 227 (295)
Q Consensus 154 i~g~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~i-~~~D~a~~i~~~~~~~~~~--~~~~~i~~~~~~t~~e~~ 227 (295)
++.... ..+.. ...... .+.++++++....++ +.+|+|++++.++.++... ++.+.+++ +.+|+.|++
T Consensus 145 f~e~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia 218 (233)
T PF05368_consen 145 FMENLL-----PPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIA 218 (233)
T ss_dssp EHHHHH-----TTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHH
T ss_pred hhhhhh-----hhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHH
Confidence 777521 10111 011111 345667777666664 9999999999999986554 56777766 779999999
Q ss_pred HHHHHHhCCC
Q 022578 228 RACAKVTGLL 237 (295)
Q Consensus 228 ~~i~~~~g~~ 237 (295)
+.+++.+|++
T Consensus 219 ~~~s~~~G~~ 228 (233)
T PF05368_consen 219 AILSKVLGKK 228 (233)
T ss_dssp HHHHHHHTSE
T ss_pred HHHHHHHCCc
Confidence 9999999987
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=185.90 Aligned_cols=184 Identities=14% Similarity=0.126 Sum_probs=143.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|.+.... ..+++++.+|++++. +.+++. ++|+|||++
T Consensus 6 TGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~--------------~~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLA 68 (699)
T PRK12320 6 TDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL--------------DPRVDYVCASLRNPV-LQELAG--EADAVIHLA 68 (699)
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc--------------cCCceEEEccCCCHH-HHHHhc--CCCEEEEcC
Confidence 799999999999999999999999998754310 146889999999985 778888 899999999
Q ss_pred cC--------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEec
Q 022578 81 GR--------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR 150 (295)
Q Consensus 81 ~~--------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R 150 (295)
+. |..++.|++++|+ ++ ++||+||. +|... .+ ..+|.++...+++++++|
T Consensus 69 a~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~-------------~~----~~aE~ll~~~~~p~~ILR 128 (699)
T PRK12320 69 PVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE-------------LY----RQAETLVSTGWAPSLVIR 128 (699)
T ss_pred ccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc-------------cc----cHHHHHHHhcCCCEEEEe
Confidence 85 3467899999997 55 89999976 33210 01 247888888889999999
Q ss_pred cCeeecCCCCC---chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHH
Q 022578 151 PVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA 227 (295)
Q Consensus 151 ~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~ 227 (295)
++++|||+... .++..++.....++ ...++|++|++++++.++..+. +++||+++++.+|+.|++
T Consensus 129 ~~nVYGp~~~~~~~r~I~~~l~~~~~~~----------pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~ 196 (699)
T PRK12320 129 IAPPVGRQLDWMVCRTVATLLRSKVSAR----------PIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAW 196 (699)
T ss_pred CceecCCCCcccHhHHHHHHHHHHHcCC----------ceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHH
Confidence 99999996542 23344443333333 3345999999999999987643 359999999999999999
Q ss_pred HHHHHH
Q 022578 228 RACAKV 233 (295)
Q Consensus 228 ~~i~~~ 233 (295)
+.+...
T Consensus 197 ~~i~~~ 202 (699)
T PRK12320 197 RLLRSV 202 (699)
T ss_pred HHHHHh
Confidence 999776
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=168.49 Aligned_cols=207 Identities=18% Similarity=0.140 Sum_probs=150.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-hHHHHHhh-hcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSL-SAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~-~~~~~d~vi~ 78 (295)
|||+|++|+.++++|+++|++|+++.|++++...... ...+++++.+|+++ .+.+.+.+ . ++|+||+
T Consensus 23 tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~~l~~~~~~--~~d~vi~ 91 (251)
T PLN00141 23 AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---------QDPSLQIVRADVTEGSDKLVEAIGD--DSDAVIC 91 (251)
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---------cCCceEEEEeeCCCCHHHHHHHhhc--CCCEEEE
Confidence 6999999999999999999999999999766322211 01468999999998 46677777 5 8999999
Q ss_pred cccCC------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC-CCCCCcc-chhhHHHHHHhhhc
Q 022578 79 INGRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSR-HKGKLNTESVLESK 142 (295)
Q Consensus 79 ~a~~~------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~-~~~p~~~-~~~k~~~E~~~~~~ 142 (295)
+++.. ..++.+++++++ ++++||++||.++|+...+.+..+.. ...+... +..|..+|+++++.
T Consensus 92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~ 171 (251)
T PLN00141 92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS 171 (251)
T ss_pred CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence 98753 225788999987 78899999999999754332222111 0111122 35788899999999
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCC---c
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE---K 219 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~---~ 219 (295)
+++++++|||+++++... +.....+++ .....+++.+|+|++++.++..+...+.++.+.+. .
T Consensus 172 gi~~~iirpg~~~~~~~~-------------~~~~~~~~~-~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (251)
T PLN00141 172 GINYTIVRPGGLTNDPPT-------------GNIVMEPED-TLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP 237 (251)
T ss_pred CCcEEEEECCCccCCCCC-------------ceEEECCCC-ccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence 999999999999986421 111111111 11235699999999999999887766778888863 3
Q ss_pred ccCHHHHHHHHHH
Q 022578 220 YVTFDGLARACAK 232 (295)
Q Consensus 220 ~~t~~e~~~~i~~ 232 (295)
..++.+++..+++
T Consensus 238 ~~~~~~~~~~~~~ 250 (251)
T PLN00141 238 KRSYKDLFASIKQ 250 (251)
T ss_pred chhHHHHHHHhhc
Confidence 4788998888765
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-22 Score=152.60 Aligned_cols=211 Identities=20% Similarity=0.294 Sum_probs=164.1
Q ss_pred CCcCCcchHHHHHHHHHCCCe--EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
||++|.+|++|.+.+.++|.+ --++. . .-.+|+++.++.+.+|++.+|.+|||
T Consensus 7 tGg~GLVGsAi~~vv~~q~~~~e~wvf~-~------------------------skd~DLt~~a~t~~lF~~ekPthVIh 61 (315)
T KOG1431|consen 7 TGGTGLVGSAIVKVVQEQGFDDENWVFI-G------------------------SKDADLTNLADTRALFESEKPTHVIH 61 (315)
T ss_pred ecCCchHHHHHHHHHHhcCCCCcceEEe-c------------------------cccccccchHHHHHHHhccCCceeee
Confidence 699999999999999998751 11111 1 12368999999999999999999999
Q ss_pred cccC-----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC----CCCCCcc-c-hhhH
Q 022578 79 INGR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKL 133 (295)
Q Consensus 79 ~a~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~p~~~-~-~~k~ 133 (295)
+|+. |.....|++..|. ++++++++.|+++|-+....|++|+. |+.|.++ | ..|.
T Consensus 62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr 141 (315)
T KOG1431|consen 62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR 141 (315)
T ss_pred hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence 9874 3445667777776 99999999999999888888999885 5566665 3 6665
Q ss_pred HHHH----HhhhcCCcEEEeccCeeecCCCC-----CchHHHHHHHHH----cCC-CcccCCCCCceeeeeeHHHHHHHH
Q 022578 134 NTES----VLESKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLK----AGR-PIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 134 ~~E~----~~~~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
++.- +..+.|..++.+-|.++|||.+. +-.++.++.++. .|. .+.++|+|...++|+|.+|+|+++
T Consensus 142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~ 221 (315)
T KOG1431|consen 142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF 221 (315)
T ss_pred HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence 5443 23568999999999999999862 223555555443 344 678899999999999999999999
Q ss_pred HHHhcCCCCCCceEEecCCc--ccCHHHHHHHHHHHhCCC
Q 022578 200 VQVLGNEKASRQVFNISGEK--YVTFDGLARACAKVTGLL 237 (295)
Q Consensus 200 ~~~~~~~~~~~~~~~i~~~~--~~t~~e~~~~i~~~~g~~ 237 (295)
++++.+=+. -+.++++.++ .+|++|+++.+.++.+..
T Consensus 222 i~vlr~Y~~-vEpiils~ge~~EVtI~e~aeaV~ea~~F~ 260 (315)
T KOG1431|consen 222 IWVLREYEG-VEPIILSVGESDEVTIREAAEAVVEAVDFT 260 (315)
T ss_pred HHHHHhhcC-ccceEeccCccceeEHHHHHHHHHHHhCCC
Confidence 999987332 2356677766 799999999999999987
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-20 Score=174.37 Aligned_cols=193 Identities=16% Similarity=0.157 Sum_probs=146.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|++.|.++|++|... .+|++|.+.+...+...++|+|||||
T Consensus 386 tGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------~~~l~d~~~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 386 YGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------KGRLEDRSSLLADIRNVKPTHVFNAA 436 (668)
T ss_pred ECCCchHHHHHHHHHHhCCCeEEee-----------------------------ccccccHHHHHHHHHhhCCCEEEECC
Confidence 7999999999999999999887310 13567888898899888999999999
Q ss_pred cC-------------------ChhcHHHHHHhCC--CCCcEEEeeccccccCC------CCCCCCCCCCCCCC-c-cchh
Q 022578 81 GR-------------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS------DLLPHCETDTVDPK-S-RHKG 131 (295)
Q Consensus 81 ~~-------------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~------~~~~~~e~~~~~p~-~-~~~~ 131 (295)
+. |..++.+++++|+ ++ ++|++||.+||+.. .+.++.|++++.|. + |..+
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s 515 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT 515 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence 74 2346889999998 66 67888999998742 23478888766543 4 4599
Q ss_pred hHHHHHHhhhcCCcEEEeccCeeecCCC--CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 132 KLNTESVLESKGVNWTSLRPVYIYGPLN--YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 132 k~~~E~~~~~~~~~~~i~R~~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
|.++|++++.+ .++.++|+.++|+.+. ..+++..+++. .+.+.++ .+..+++|++.+++.++..+ .
T Consensus 516 K~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~---~~~~~vp------~~~~~~~~~~~~~~~l~~~~--~ 583 (668)
T PLN02260 516 KAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRY---NKVVNIP------NSMTVLDELLPISIEMAKRN--L 583 (668)
T ss_pred HHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhcc---ceeeccC------CCceehhhHHHHHHHHHHhC--C
Confidence 99999999876 5788999999997542 22343333321 2233332 24677889999888888643 2
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
+++||++++..+|+.|+++.+.+.++
T Consensus 584 ~giyni~~~~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 584 RGIWNFTNPGVVSHNEILEMYKDYID 609 (668)
T ss_pred CceEEecCCCcCcHHHHHHHHHHhcC
Confidence 57999999999999999999999875
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.6e-20 Score=187.22 Aligned_cols=232 Identities=19% Similarity=0.207 Sum_probs=161.8
Q ss_pred CCcCCcchHHHHHHHHHCC----CeEEEEecCCCccccCCCCCCchhh-------hhccCCeEEEEecCCC------hHH
Q 022578 1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEF-------AEFSSKILHLKGDRKD------YDF 63 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~D~~~------~~~ 63 (295)
||||||+|++++++|++++ ++|+++.|........ .. ..... .....+++++.+|+++ .+.
T Consensus 977 TGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~-~~-l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~ 1054 (1389)
T TIGR03443 977 TGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGL-ER-LRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEK 1054 (1389)
T ss_pred eCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHH-HH-HHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHH
Confidence 7999999999999999887 8999999976542110 00 00000 0112478999999974 456
Q ss_pred HHHhhhcCCCcEEEEcccC-------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCC------------CCC
Q 022578 64 VKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD------------LLP 116 (295)
Q Consensus 64 ~~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~------------~~~ 116 (295)
+..+.. ++|+|||+|+. |+.++.++++++. +.++|+|+||.++|+... ...
T Consensus 1055 ~~~l~~--~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~ 1132 (1389)
T TIGR03443 1055 WSDLTN--EVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAG 1132 (1389)
T ss_pred HHHHHh--cCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCC
Confidence 677777 89999999875 5668999999987 778999999999996421 112
Q ss_pred CCCCCCC-----CC-CccchhhHHHHHHhhh---cCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCC-CcccCCCCCc
Q 022578 117 HCETDTV-----DP-KSRHKGKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGR-PIPIPGSGIQ 185 (295)
Q Consensus 117 ~~e~~~~-----~p-~~~~~~k~~~E~~~~~---~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~ 185 (295)
+.|+... .+ ..|..+|+.+|+++.. .|++++++|||.|||+...+. ....++..+..+. ......+...
T Consensus 1133 ~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~ 1212 (1389)
T TIGR03443 1133 IPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINN 1212 (1389)
T ss_pred CCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCC
Confidence 3343321 12 2355999999999843 589999999999999865321 1122222222211 1112234456
Q ss_pred eeeeeeHHHHHHHHHHHhcCCCC--CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 186 VTQLGHVKDLARAFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 186 ~~~~i~~~D~a~~i~~~~~~~~~--~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.+++++++|++++++.++.++.. .+.+||++++..+++.++++.+.+. |.+
T Consensus 1213 ~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~ 1265 (1389)
T TIGR03443 1213 TVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYD 1265 (1389)
T ss_pred ccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCC
Confidence 68999999999999999876532 3458999999889999999999764 554
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-21 Score=161.56 Aligned_cols=231 Identities=15% Similarity=0.133 Sum_probs=148.5
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccC--CCCCC---chhhhhccCCeEEEEecCCC------hHHHHHhh
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQ--LPGES---DQEFAEFSSKILHLKGDRKD------YDFVKSSL 68 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~--~~~~~---~~~~~~~~~~v~~~~~D~~~------~~~~~~~~ 68 (295)
||||||+|.+++++|+.+ ..+|+|+.|..+...+. +.+.. ..-...+..+++++.+|+.. ...+..+.
T Consensus 6 TGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La 85 (382)
T COG3320 6 TGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA 85 (382)
T ss_pred ecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh
Confidence 899999999999999987 46999999998852211 11000 00012345789999999984 57788888
Q ss_pred hcCCCcEEEEcccC-------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCC----CCCCCCCCC------
Q 022578 69 SAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCETDTV------ 123 (295)
Q Consensus 69 ~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~----~~~~e~~~~------ 123 (295)
+ .+|.|||+++. |+.++..+++.|. +.|.++|+||++|+..... ...+|+++.
T Consensus 86 ~--~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (382)
T COG3320 86 E--NVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQG 163 (382)
T ss_pred h--hcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccCc
Confidence 8 99999999875 8889999999988 5777999999999864321 112222221
Q ss_pred CCCccchhhHHHHHHhh---hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHH-cCCCcccCCCCCceeeeeeH--
Q 022578 124 DPKSRHKGKLNTESVLE---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHV-- 192 (295)
Q Consensus 124 ~p~~~~~~k~~~E~~~~---~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~-- 192 (295)
.+..|.+||+.+|.+++ +.|++++|+|||+|-|+... ..++..+..... .|... +.+...+++.+
T Consensus 164 ~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P----~~~~~~~~~p~~~ 239 (382)
T COG3320 164 LAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP----DSEYSLDMLPVDH 239 (382)
T ss_pred cCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC----CcccchhhCccce
Confidence 22346699999999995 36899999999999998651 122333332222 23221 11222233332
Q ss_pred ---------HHHHHHHHHHhcCCCCCCceEE-ecCCcccCHHHHHHHHHH--HhCCC
Q 022578 193 ---------KDLARAFVQVLGNEKASRQVFN-ISGEKYVTFDGLARACAK--VTGLL 237 (295)
Q Consensus 193 ---------~D~a~~i~~~~~~~~~~~~~~~-i~~~~~~t~~e~~~~i~~--~~g~~ 237 (295)
.-+++++..+..++...-..|+ ..-|..+...++.+.+.+ ..+.+
T Consensus 240 v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~~~~a~~~ 296 (382)
T COG3320 240 VARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLISLDIAGYP 296 (382)
T ss_pred eeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhhhhccCCc
Confidence 2333344444433322222343 233677999999999888 44444
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-20 Score=166.64 Aligned_cols=215 Identities=17% Similarity=0.145 Sum_probs=146.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh----hccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA----EFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
|||+|+||++++++|+++|++|++++|+..+............+. ....+++++.+|+.|.+++.+++. ++|+|
T Consensus 86 TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg--giDiV 163 (576)
T PLN03209 86 AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG--NASVV 163 (576)
T ss_pred ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence 699999999999999999999999999876632111000000000 001358899999999999999998 99999
Q ss_pred EEcccCC--------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC-CccchhhHHHHHHh
Q 022578 77 YDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVL 139 (295)
Q Consensus 77 i~~a~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~ 139 (295)
||++|.. ..++.++++++. +++|||++||.+++... .... .... ..+...|..+|+.+
T Consensus 164 Vn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~-~~~sk~~~~~~KraaE~~L 238 (576)
T PLN03209 164 ICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAA-ILNLFWGVLCWKRKAEEAL 238 (576)
T ss_pred EEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----cccc-chhhHHHHHHHHHHHHHHH
Confidence 9998752 246888999987 88999999998763111 0011 1111 12346788899999
Q ss_pred hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC-CCCceEEecCC
Q 022578 140 ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE 218 (295)
Q Consensus 140 ~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~~~~~~i~~~ 218 (295)
+..|++|++||||+++++...... .+. +............+..+|+|++++.++.++. ..+.+|.+.++
T Consensus 239 ~~sGIrvTIVRPG~L~tp~d~~~~---------t~~-v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~ 308 (576)
T PLN03209 239 IASGLPYTIVRPGGMERPTDAYKE---------THN-LTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAE 308 (576)
T ss_pred HHcCCCEEEEECCeecCCcccccc---------ccc-eeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeC
Confidence 999999999999999987432100 011 1110111111234889999999999998654 66889999987
Q ss_pred cccCHHHHHHHHHH
Q 022578 219 KYVTFDGLARACAK 232 (295)
Q Consensus 219 ~~~t~~e~~~~i~~ 232 (295)
.......+.+.+.+
T Consensus 309 ~~~p~~~~~~~~~~ 322 (576)
T PLN03209 309 TTAPLTPMEELLAK 322 (576)
T ss_pred CCCCCCCHHHHHHh
Confidence 64444455555544
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.5e-18 Score=142.01 Aligned_cols=205 Identities=23% Similarity=0.269 Sum_probs=161.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||||++|++++++|+++|++|+++.|+++...... .+++++.+|+.++..+...++ +.+.++++.
T Consensus 6 ~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~--G~~~~~~i~ 71 (275)
T COG0702 6 TGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAK--GVDGVLLIS 71 (275)
T ss_pred EecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhc--cccEEEEEe
Confidence 699999999999999999999999999998854322 579999999999999999999 999999887
Q ss_pred cCC-------hh---cHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEe
Q 022578 81 GRE-------AD---EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL 149 (295)
Q Consensus 81 ~~~-------~~---~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~ 149 (295)
+.. .. ...+..+++. +.++++++|....- ...+..+..+|..+|+.+.+.+++++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~------------~~~~~~~~~~~~~~e~~l~~sg~~~t~l 139 (275)
T COG0702 72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGAD------------AASPSALARAKAAVEAALRSSGIPYTTL 139 (275)
T ss_pred cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCC------------CCCccHHHHHHHHHHHHHHhcCCCeEEE
Confidence 732 12 2344444454 67889988877641 2334456699999999999999999999
Q ss_pred ccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHH
Q 022578 150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229 (295)
Q Consensus 150 R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~ 229 (295)
|+..+|...... ........+.+....+. ...+++..+|++.++...+..+...+++|.+++++..+..++.+.
T Consensus 140 r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~ 213 (275)
T COG0702 140 RRAAFYLGAGAA----FIEAAEAAGLPVIPRGI--GRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASG 213 (275)
T ss_pred ecCeeeeccchh----HHHHHHhhCCceecCCC--CceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHH
Confidence 977776653211 12222333444333333 378999999999999999998777789999999999999999999
Q ss_pred HHHHhCCC
Q 022578 230 CAKVTGLL 237 (295)
Q Consensus 230 i~~~~g~~ 237 (295)
+.+..|++
T Consensus 214 l~~~~gr~ 221 (275)
T COG0702 214 LDYTIGRP 221 (275)
T ss_pred HHHHhCCc
Confidence 99999998
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=143.82 Aligned_cols=206 Identities=17% Similarity=0.183 Sum_probs=142.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||++++++|+++|++|+++.|+++...... .....++.++.+|++|.+++.+++++ .++|+
T Consensus 8 tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 8 TGASSGFGRGMTERLLARGDRVAATVRRPDALDDLK--------ARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865522110 11124688999999999988887753 26899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGR--------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|. |..++.++++++ + +.+++|++||....... .....|.
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~ 149 (276)
T PRK06482 80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY----------PGFSLYH 149 (276)
T ss_pred EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCC----------CCCchhH
Confidence 9999985 334566677774 3 56799999997643111 1112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCee---ecCCCCC--------ch-HHHHHHHHHcCCCcccCCCCCceeeee
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYI---YGPLNYN--------PV-EEWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i---~g~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
.+|+..|.+++ ..+++++++|||.+ ||++... .. ...+.+.. ....+.+ +.
T Consensus 150 ~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~ 219 (276)
T PRK06482 150 ATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRAL-ADGSFAI---------PG 219 (276)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHH-hhccCCC---------CC
Confidence 99999887763 25899999999988 5543211 00 11122222 2222211 24
Q ss_pred eHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhC
Q 022578 191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
+++|++++++.++..+.. +..|++++++..+..|+++.+.+.++
T Consensus 220 d~~~~~~a~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 220 DPQKMVQAMIASADQTPA-PRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred CHHHHHHHHHHHHcCCCC-CeEEecChHHHHHHHHHHHHHHHHHH
Confidence 689999999999876533 45799999988888888887777665
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.2e-18 Score=140.07 Aligned_cols=198 Identities=20% Similarity=0.219 Sum_probs=132.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++|+.......+. ..+... ...+.++.+|+++.+++..++++. .+|
T Consensus 12 tGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 87 (249)
T PRK09135 12 TGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALA----AELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD 87 (249)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999999987543111110 011111 135889999999999998888742 689
Q ss_pred EEEEcccC--------------------ChhcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-c
Q 022578 75 VVYDINGR--------------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R 128 (295)
Q Consensus 75 ~vi~~a~~--------------------~~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~ 128 (295)
+|||++|. |..++.++++++. ...+++.+++... ..+..+.. |
T Consensus 88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~Y 156 (249)
T PRK09135 88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA-----------ERPLKGYPVY 156 (249)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh-----------cCCCCCchhH
Confidence 99999984 3445667777763 2335555554221 22333444 4
Q ss_pred chhhHHHHHHhhh------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 129 HKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 129 ~~~k~~~E~~~~~------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
..+|..+|.+++. .+++++++|||.+++|.....+..........+.+... +.+++|+|+++..+
T Consensus 157 ~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~a~~~~~~ 227 (249)
T PRK09135 157 CAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKR---------IGTPEDIAEAVRFL 227 (249)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCC---------CcCHHHHHHHHHHH
Confidence 4999999988742 36899999999999997543332223333333332211 12489999999766
Q ss_pred hcC-CCCCCceEEecCCcccC
Q 022578 203 LGN-EKASRQVFNISGEKYVT 222 (295)
Q Consensus 203 ~~~-~~~~~~~~~i~~~~~~t 222 (295)
+.+ +...|++|+++++..++
T Consensus 228 ~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 228 LADASFITGQILAVDGGRSLT 248 (249)
T ss_pred cCccccccCcEEEECCCeecc
Confidence 654 33468899999987654
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-18 Score=133.19 Aligned_cols=235 Identities=17% Similarity=0.171 Sum_probs=174.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCcccc-CCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||-||.-|++|++.|+.+||+|.++.|+.+.... +......-...-.........+|++|...+.+++...+|+-|+|+
T Consensus 34 TGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEiYnL 113 (376)
T KOG1372|consen 34 TGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEVYNL 113 (376)
T ss_pred ecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhhhhh
Confidence 6899999999999999999999999998877421 111111101111124678899999999999999999999999999
Q ss_pred ccC----------------ChhcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 80 NGR----------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
|+. ...++.+|+++++ ..-||-..||+..||.....|..|..|..|.+.| .+|..+-.
T Consensus 114 aAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~W 193 (376)
T KOG1372|consen 114 AAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYW 193 (376)
T ss_pred hhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheE
Confidence 886 2347888998865 3458999999999999999999999999998876 77766543
Q ss_pred Hh----hhcCCcEEEeccCeeecCCCCCchHHHHH----HHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 022578 138 VL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFF----HRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 138 ~~----~~~~~~~~i~R~~~i~g~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
++ ..+++=.|.--..+.-.|+...++...-+ ..+.-|+. ....|+.+..++|-|..|.+++++.+++++..
T Consensus 194 ivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~P 273 (376)
T KOG1372|consen 194 IVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSP 273 (376)
T ss_pred EEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCC
Confidence 33 34554444433344445655444433322 22223332 22247888999999999999999999998653
Q ss_pred CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 209 SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 209 ~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
..|.|+.++..|.+|+++.-...+|..
T Consensus 274 --dDfViATge~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 274 --DDFVIATGEQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred --CceEEecCCcccHHHHHHHHHHhhCcE
Confidence 589999999999999999999988843
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.3e-18 Score=139.15 Aligned_cols=197 Identities=18% Similarity=0.205 Sum_probs=134.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|++|.+++++|+++|++|+++.|.......... ........++.++.+|+++.+.+.+++++. ++|+
T Consensus 12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~ 87 (249)
T PRK12825 12 TGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELV----EAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDI 87 (249)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999888887654221110 011122356889999999999998887642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..+..++++++ + +.+++|++||...+.+.. ....|.
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~----------~~~~y~ 157 (249)
T PRK12825 88 LVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP----------GRSNYA 157 (249)
T ss_pred EEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC----------CchHHH
Confidence 99999841 12334445443 3 678999999988753211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+++ ..+++++++|||.++++............. ....+ ...+++++|+++++..+
T Consensus 158 ~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~dva~~~~~~ 227 (249)
T PRK12825 158 AAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK---DAETP-------LGRSGTPEDIARAVAFL 227 (249)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh---hccCC-------CCCCcCHHHHHHHHHHH
Confidence 88887776652 368999999999999986533222221111 00111 12278999999999999
Q ss_pred hcCC--CCCCceEEecCCccc
Q 022578 203 LGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~~ 221 (295)
+.++ ...|+.|+++++..+
T Consensus 228 ~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 228 CSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred hCccccCcCCCEEEeCCCEee
Confidence 9764 346899999998654
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=138.29 Aligned_cols=196 Identities=17% Similarity=0.150 Sum_probs=133.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|++|.+++++|+++|++|++++|++++..... ..+.....++.++.+|+.|++++.++++.. .+|+
T Consensus 12 tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 86 (251)
T PRK12826 12 TGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA-----ELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI 86 (251)
T ss_pred cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865422111 111222245889999999999998888642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-c
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~ 128 (295)
|||+++.. ..++.++++++ . +.++||++||...++. +..+.. |
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------~~~~~~~y 156 (251)
T PRK12826 87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------GYPGLAHY 156 (251)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------CCCCccHH
Confidence 99998752 12334455553 2 5678999999876511 111122 4
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|..++.+++ ..+++++++|||.++||.........+........++ ..+++++|+|+++..
T Consensus 157 ~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~ 227 (251)
T PRK12826 157 AASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEPEDIAAAVLF 227 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence 488888877663 3589999999999999864221111112222222221 146889999999999
Q ss_pred HhcCCC--CCCceEEecCCcc
Q 022578 202 VLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~~~ 220 (295)
++..+. ..|+.|++.++..
T Consensus 228 l~~~~~~~~~g~~~~~~~g~~ 248 (251)
T PRK12826 228 LASDEARYITGQTLPVDGGAT 248 (251)
T ss_pred HhCccccCcCCcEEEECCCcc
Confidence 887543 3588999988753
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.9e-18 Score=142.42 Aligned_cols=202 Identities=15% Similarity=0.124 Sum_probs=135.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++...+.. ..+.+...++.++.+|++|.+.+.++++. ..+|+
T Consensus 13 tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 87 (262)
T PRK13394 13 TGAASGIGKEIALELARAGAAVAIADLNQDGANAVA-----DEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI 87 (262)
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-----HHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999875532211 11122234578899999999998887763 24899
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhC-C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADE----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||+++.. ..+ ++++++++ + +.+++|++||...+...+ ....|
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~y 157 (262)
T PRK13394 88 LVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASP----------LKSAY 157 (262)
T ss_pred EEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCC----------CCccc
Confidence 99999862 122 55677777 4 678999999975432110 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCC-----cccCCCCCceeeeeeHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-----IPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~D~a 196 (295)
..+|...+.+++ ..+++++++|||.+++|.....+ ...... .+.. ..+++.+....++++++|++
T Consensus 158 ~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva 234 (262)
T PRK13394 158 VTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQI-PEQAKE--LGISEEEVVKKVMLGKTVDGVFTTVEDVA 234 (262)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhh-Hhhhhc--cCCChHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 588888776653 35899999999999998532111 100000 0000 01122334456899999999
Q ss_pred HHHHHHhcCCC--CCCceEEecCCcc
Q 022578 197 RAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 197 ~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
++++.++.... ..|+.|+++++..
T Consensus 235 ~a~~~l~~~~~~~~~g~~~~~~~g~~ 260 (262)
T PRK13394 235 QTVLFLSSFPSAALTGQSFVVSHGWF 260 (262)
T ss_pred HHHHHHcCccccCCcCCEEeeCCcee
Confidence 99999987643 3478898887743
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.7e-17 Score=122.14 Aligned_cols=191 Identities=21% Similarity=0.281 Sum_probs=142.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||||.+|+.|+++++++||+|++++|++++..+. .++.+.+.|+.|++++.+.+. +.|+||...
T Consensus 6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------------~~~~i~q~Difd~~~~a~~l~--g~DaVIsA~ 70 (211)
T COG2910 6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------------QGVTILQKDIFDLTSLASDLA--GHDAVISAF 70 (211)
T ss_pred EecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------------ccceeecccccChhhhHhhhc--CCceEEEec
Confidence 59999999999999999999999999999995432 478899999999999999999 999999876
Q ss_pred cCCh--------hcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHH--Hh-hhcCCcE
Q 022578 81 GREA--------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES--VL-ESKGVNW 146 (295)
Q Consensus 81 ~~~~--------~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~--~~-~~~~~~~ 146 (295)
+... ...+.|++.++ ++.|++.+...+-..-.++ ..-.+.|..|..|+ ..+..+|. .+ .+.+++|
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~W 149 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDW 149 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCCchhHHHHHHHHHHHHHHHhhccCcce
Confidence 5531 12455777777 8899999887655432222 23344566677776 67777773 34 3567999
Q ss_pred EEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEec
Q 022578 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216 (295)
Q Consensus 147 ~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~ 216 (295)
+.+-|+.+|-|+..++.. +-|+.....+. .-.+.|+..|.|-+++..++++.+.+++|.+.
T Consensus 150 TfvSPaa~f~PGerTg~y-------rlggD~ll~n~--~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~ 210 (211)
T COG2910 150 TFVSPAAFFEPGERTGNY-------RLGGDQLLVNA--KGESRISYADYAIAVLDELEKPQHIRQRFTVA 210 (211)
T ss_pred EEeCcHHhcCCccccCce-------EeccceEEEcC--CCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence 999999999997644321 12332222221 22377999999999999999998888888764
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.4e-17 Score=136.15 Aligned_cols=200 Identities=17% Similarity=0.215 Sum_probs=131.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|++|++++++|+++|++|++++|++....... ..+.....++.++.+|+.|.+++..+++. .++|+
T Consensus 7 tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 7 TGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAA-----KVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999875522111 01111124688999999999977665543 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..++..++++ ++ +.+++|++||...+.+... ...|.
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~----------~~~y~ 151 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF----------KSAYV 151 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC----------CchhH
Confidence 99999752 1222333333 33 6779999999765533211 12344
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcc-------cCCCCCceeeeeeHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-------IPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~D~ 195 (295)
.+|...+.+++ ..+++++++||+.++++.... .+.......... ....+.....+++++|+
T Consensus 152 ~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 226 (255)
T TIGR01963 152 AAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK-----QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEV 226 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH-----HHHhhhcccCCCchHHHHHHHHccCccccCcCHHHH
Confidence 78877776653 248999999999999984211 111110111100 01123345678999999
Q ss_pred HHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 196 ARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 196 a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
|++++.++.+. ...++.|++.++..
T Consensus 227 a~~~~~~~~~~~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 227 AETALFLASDAAAGITGQAIVLDGGWT 253 (255)
T ss_pred HHHHHHHcCccccCccceEEEEcCccc
Confidence 99999999763 23577899987653
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-17 Score=135.43 Aligned_cols=203 Identities=19% Similarity=0.238 Sum_probs=133.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.......+ ...+.....++.++.+|+++++++.+++++ .++|+
T Consensus 12 tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 87 (248)
T PRK07806 12 TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKV----VAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA 87 (248)
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence 799999999999999999999999998754311111 011122224678899999999998887764 26899
Q ss_pred EEEcccC--------------ChhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHH
Q 022578 76 VYDINGR--------------EADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTES 137 (295)
Q Consensus 76 vi~~a~~--------------~~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~ 137 (295)
|||+++. |..++.++++++. ...++|++||........ .+..+ ....|..+|+.+|.
T Consensus 88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~~-~~~~Y~~sK~a~e~ 162 (248)
T PRK07806 88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKTMP-EYEPVARSKRAGED 162 (248)
T ss_pred EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccCCc-cccHHHHHHHHHHH
Confidence 9999874 3345667777764 335899999865421110 01111 11234599999998
Q ss_pred Hhhh-------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 022578 138 VLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210 (295)
Q Consensus 138 ~~~~-------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 210 (295)
+++. .++++++++|+.+-++.. ..+... ..+-...........+++++|+|++++.++..+...|
T Consensus 163 ~~~~l~~~~~~~~i~v~~v~pg~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~g 234 (248)
T PRK07806 163 ALRALRPELAEKGIGFVVVSGDMIEGTVT-----ATLLNR---LNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPSG 234 (248)
T ss_pred HHHHHHHHhhccCeEEEEeCCccccCchh-----hhhhcc---CCHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccCc
Confidence 8743 578999999987766521 111100 0000000000011367899999999999999776678
Q ss_pred ceEEecCCcc
Q 022578 211 QVFNISGEKY 220 (295)
Q Consensus 211 ~~~~i~~~~~ 220 (295)
+.|++++++.
T Consensus 235 ~~~~i~~~~~ 244 (248)
T PRK07806 235 HIEYVGGADY 244 (248)
T ss_pred cEEEecCccc
Confidence 8999999864
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.2e-17 Score=135.85 Aligned_cols=199 Identities=17% Similarity=0.198 Sum_probs=133.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|++|.+++++|+++|++|++++|++++..... ..+.....++.++.+|+++++++.++++.. .+|+
T Consensus 10 tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 84 (258)
T PRK12429 10 TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA-----EALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI 84 (258)
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876532211 111222357889999999999998887642 6899
Q ss_pred EEEcccC--------------------Chhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGR--------------------EADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~--------------------~~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++. |..+ ++.++.+++ +.++||++||...+.+.. ....|.
T Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~----------~~~~y~ 154 (258)
T PRK12429 85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSA----------GKAAYV 154 (258)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC----------CcchhH
Confidence 9999975 2223 444555554 678999999976543211 112244
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHc--CCCc-----ccCCCCCceeeeeeHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPI-----PIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~i~~~D~ 195 (295)
.+|...+.+.+ ..+++++++|||.+++|..... +..... +.+. ..++.......+++++|+
T Consensus 155 ~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 229 (258)
T PRK12429 155 SAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEI 229 (258)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCCccccCCHHHH
Confidence 77777775553 3579999999999999853211 111100 1110 011222234578999999
Q ss_pred HHHHHHHhcCCC--CCCceEEecCCc
Q 022578 196 ARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 196 a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
|+++..++.... ..++.|++.++.
T Consensus 230 a~~~~~l~~~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 230 ADYALFLASFAAKGVTGQAWVVDGGW 255 (258)
T ss_pred HHHHHHHcCccccCccCCeEEeCCCE
Confidence 999999986532 357889888763
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-16 Score=133.01 Aligned_cols=213 Identities=20% Similarity=0.213 Sum_probs=143.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||.+++++|+++|++|++++|+++...... ..+... ..++.++.+|++|++++.+++++. .+
T Consensus 13 tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 87 (276)
T PRK05875 13 TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAA-----EEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL 87 (276)
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999865522111 011111 146788999999999988887743 68
Q ss_pred cEEEEcccCC---------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGRE---------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 74 d~vi~~a~~~---------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
|+|||++|.. ..+..++++++. +..++|++||...+.... ...
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~~ 157 (276)
T PRK05875 88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHR----------WFG 157 (276)
T ss_pred CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCC----------CCc
Confidence 9999999741 122333444322 446899999987643211 112
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
.|..+|...|.+++ ..+++++++|||.+.++...... ............+ ...+++++|+|++
T Consensus 158 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~ 228 (276)
T PRK05875 158 AYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP---------LPRVGEVEDVANL 228 (276)
T ss_pred chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC---------CCCCcCHHHHHHH
Confidence 35599999998874 24789999999998876431100 0111111111111 1235679999999
Q ss_pred HHHHhcCCCC--CCceEEecCCccc----CHHHHHHHHHHHhCCC
Q 022578 199 FVQVLGNEKA--SRQVFNISGEKYV----TFDGLARACAKVTGLL 237 (295)
Q Consensus 199 i~~~~~~~~~--~~~~~~i~~~~~~----t~~e~~~~i~~~~g~~ 237 (295)
+..++.++.. .++.++++++..+ +..|+++.+.+..+..
T Consensus 229 ~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 273 (276)
T PRK05875 229 AMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR 273 (276)
T ss_pred HHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence 9999987543 4789999998776 7888888887766543
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-17 Score=140.47 Aligned_cols=208 Identities=19% Similarity=0.157 Sum_probs=141.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++...... ......+.++++|++|.+++..+++. ..+|+
T Consensus 9 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 9 TGASRGFGRAWTEAALERGDRVVATARDTATLADLA--------EKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876532110 11124678899999999998877764 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..++.+++++ ++ +.+++|++||...+..... ...|.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----------~~~Y~ 150 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM----------SGIYH 150 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC----------ccHHH
Confidence 99999862 2233334444 33 5679999999877543211 12355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-----h---HHHHHHHHHcCCCcccCCCCCceeee-eeHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----V---EEWFFHRLKAGRPIPIPGSGIQVTQL-GHVK 193 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~ 193 (295)
.+|+..+.+.+ ..|++++++|||.+..+..... . ...+...... ......+ ++++
T Consensus 151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~ 221 (275)
T PRK08263 151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE---------QWSERSVDGDPE 221 (275)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH---------HHHhccCCCCHH
Confidence 89998776652 3689999999998877643110 0 0011111100 0111234 7899
Q ss_pred HHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhC
Q 022578 194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 194 D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
|+|++++.++..+...+..++..+++.+++.++.+.+.+.-+
T Consensus 222 dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 222 AAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred HHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 999999999998766665555555577899999999888643
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=132.58 Aligned_cols=195 Identities=17% Similarity=0.209 Sum_probs=134.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...... ..+.....++.++.+|+++.+++..++++. .+|+
T Consensus 12 tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 86 (250)
T PRK07774 12 TGAAGGIGQAYAEALAREGASVVVADINAEGAERVA-----KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY 86 (250)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865421110 111111235778999999999888777642 6899
Q ss_pred EEEcccCC-----------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE-----------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 76 vi~~a~~~-----------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
|||++|.. ..++.++++++. +.+++|++||...|.. ..
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------~~ 153 (250)
T PRK07774 87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-------------SN 153 (250)
T ss_pred EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-------------cc
Confidence 99999852 223444444433 4579999999887632 12
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.|..+|+..|.+++ ..++++++++||.+..+.........+.+...++.+.. .+.+++|+|+++
T Consensus 154 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~ 224 (250)
T PRK07774 154 FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLS---------RMGTPEDLVGMC 224 (250)
T ss_pred ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHH
Confidence 35599999888763 24789999999999887643222223333333333321 134689999999
Q ss_pred HHHhcCCC--CCCceEEecCCcccC
Q 022578 200 VQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
+.++.... ..++.|++.+++.++
T Consensus 225 ~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 225 LFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred HHHhChhhhCcCCCEEEECCCeecc
Confidence 99987642 357899999887553
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=132.91 Aligned_cols=206 Identities=14% Similarity=0.115 Sum_probs=141.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||..++++|+++|++|++++|++........ .+ ...++.++.+|+.|.+++..+++.. ++|+
T Consensus 8 tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 8 TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFAD-----AL--GDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998765321110 00 0135889999999999998888642 5899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..+..++++++ . +..++|++||...+... ....|.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~y~ 149 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-----------GHPAYS 149 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-----------CCcccH
Confidence 99999852 12233344443 2 55689999986543111 011355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc--hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|+..+.+++ ..++++..+|||.++++..... ....+....... ....++++++|++++++
T Consensus 150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~ 220 (257)
T PRK07074 150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW---------YPLQDFATPDDVANAVL 220 (257)
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc---------CCCCCCCCHHHHHHHHH
Confidence 88998887763 2479999999999988743110 011111111111 12246899999999999
Q ss_pred HHhcCC--CCCCceEEecCCcccCHHHHHHHHHHH
Q 022578 201 QVLGNE--KASRQVFNISGEKYVTFDGLARACAKV 233 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~~~t~~e~~~~i~~~ 233 (295)
.++.+. ...|..+++.++...+..|+++.+.+.
T Consensus 221 ~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 221 FLASPAARAITGVCLPVDGGLTAGNREMARTLTLE 255 (257)
T ss_pred HHcCchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence 999753 335788899999989999999887653
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.2e-17 Score=141.08 Aligned_cols=235 Identities=15% Similarity=0.157 Sum_probs=162.5
Q ss_pred CCcCCcchHHHHHHHHHCC---CeEEEEecCCCcccc--CCC----CCCchhh----hhccCCeEEEEecCCCh------
Q 022578 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQ--QLP----GESDQEF----AEFSSKILHLKGDRKDY------ 61 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~--~~~----~~~~~~~----~~~~~~v~~~~~D~~~~------ 61 (295)
||||||+|.-+++.|+..- -+++++.|....... .+. ...-..+ .....++..+.||+.++
T Consensus 18 TG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~ 97 (467)
T KOG1221|consen 18 TGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISE 97 (467)
T ss_pred EcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCCh
Confidence 7999999999999999862 388888888766321 110 0000011 11235788999999864
Q ss_pred HHHHHhhhcCCCcEEEEcccC-------------ChhcHHHHHHhCC---CCCcEEEeeccccccCC---CCCCCCCCC-
Q 022578 62 DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS---DLLPHCETD- 121 (295)
Q Consensus 62 ~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~---~~~~~~e~~- 121 (295)
.+.....+ ++|+|||+|+. |..+++++++.|+ +.+-++|+||..+.... .+.++.+..
T Consensus 98 ~D~~~l~~--eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~ 175 (467)
T KOG1221|consen 98 SDLRTLAD--EVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPET 175 (467)
T ss_pred HHHHHHHh--cCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCcccc
Confidence 45555666 99999999886 7789999999987 88999999998876321 111221111
Q ss_pred --------------------------CCCCCccchhhHHHHHHhhh--cCCcEEEeccCeeecCCCCC--------chHH
Q 022578 122 --------------------------TVDPKSRHKGKLNTESVLES--KGVNWTSLRPVYIYGPLNYN--------PVEE 165 (295)
Q Consensus 122 --------------------------~~~p~~~~~~k~~~E~~~~~--~~~~~~i~R~~~i~g~~~~~--------~~~~ 165 (295)
...|.+|.-+|+.+|+++.+ .+++++|+||+.|.+..... .-..
T Consensus 176 ~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~ 255 (467)
T KOG1221|consen 176 CNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPD 255 (467)
T ss_pred CCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCc
Confidence 01366677999999999954 57999999999999865311 0111
Q ss_pred HHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc----C-CCCCCceEEecCC--cccCHHHHHHHHHHHhCCC
Q 022578 166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG----N-EKASRQVFNISGE--KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~----~-~~~~~~~~~i~~~--~~~t~~e~~~~i~~~~g~~ 237 (295)
.++-...+|..-.+..+.+...+.|.+|.++.+++.+.- + +.....+||++++ .+++|+++.+...+.+..-
T Consensus 256 g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~ 334 (467)
T KOG1221|consen 256 GVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKI 334 (467)
T ss_pred eEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcccC
Confidence 122222234333445678889999999999999987652 1 1122459999997 4699999999999998754
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.7e-16 Score=128.46 Aligned_cols=192 Identities=15% Similarity=0.169 Sum_probs=128.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|++.. ... ...+.....++.++.+|+++.+++..++++ ..+|+
T Consensus 14 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (260)
T PRK12823 14 TGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEV-----AAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV 87 (260)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHH-----HHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence 7999999999999999999999999987432 110 111122234678899999999888777764 26899
Q ss_pred EEEcccCCh---------------------h----cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGREA---------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~~---------------------~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||... . .++.++..+. +..++|++||...++. ....|
T Consensus 88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~~~Y 155 (260)
T PRK12823 88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------NRVPY 155 (260)
T ss_pred EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------CCCcc
Confidence 999997421 0 1234555554 5579999999876531 12246
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCC------------CchHHHHHHHHHcCCCcccCCCCCceeee
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL 189 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
..+|+..+.+.+ ..+++++.++||.+++|... ......+......+.++. -+
T Consensus 156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 226 (260)
T PRK12823 156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK---------RY 226 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc---------cC
Confidence 699999888763 24899999999999997310 001112222222222221 23
Q ss_pred eeHHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 022578 190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 190 i~~~D~a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
.+++|+|++++.++.+.. ..|..+++.+++
T Consensus 227 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 227 GTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred CCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 468999999999886542 357889998765
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.2e-16 Score=129.86 Aligned_cols=186 Identities=17% Similarity=0.218 Sum_probs=129.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||..++++|+++|++|++++|++.+..+... .+. ..+++++.+|+.|.+++..++++. ++|+
T Consensus 13 tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 13 TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP-----GVP--ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHH-----HHh--hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 6999999999999999999999999998755221111 001 135778899999999888877642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..++.++++++ . +.+++|++||...++.... -..|.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------~~~y~ 155 (239)
T PRK12828 86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG----------MGAYA 155 (239)
T ss_pred EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC----------cchhH
Confidence 99998752 22344555553 2 6789999999887643210 11244
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+++ ..++++..+|||.++++..... . +. .....+++++|+|++++.+
T Consensus 156 ~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--------------~--~~--~~~~~~~~~~dva~~~~~~ 217 (239)
T PRK12828 156 AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--------------M--PD--ADFSRWVTPEQIAAVIAFL 217 (239)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--------------C--Cc--hhhhcCCCHHHHHHHHHHH
Confidence 78877666552 3589999999999998732100 0 00 1122368999999999999
Q ss_pred hcCCC--CCCceEEecCCccc
Q 022578 203 LGNEK--ASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~~~ 221 (295)
+.+.. ..|+.+.+.+++..
T Consensus 218 l~~~~~~~~g~~~~~~g~~~~ 238 (239)
T PRK12828 218 LSDEAQAITGASIPVDGGVAL 238 (239)
T ss_pred hCcccccccceEEEecCCEeC
Confidence 98642 35788888887643
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.3e-17 Score=133.77 Aligned_cols=202 Identities=16% Similarity=0.218 Sum_probs=134.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ .....++.++.+|++|.+++..++++. .+|+
T Consensus 12 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 12 TGAASGIGEAVAERYLAEGARVVIADIKPARARLAA--------LEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876532111 111245888999999999998888742 6899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC-------CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR--------------------EADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+++. |..++.++++++. ...++|++||.....+. ..-..|
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y 153 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE----------ALVSHY 153 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC----------CCCchh
Confidence 9999875 2234555665543 12589999996532111 011234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHH---cCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..+|...+.+.+ ..+++++.++||.++++..... ...+.... .+......+.......+++++|+|++
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 231 (257)
T PRK07067 154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQV--DALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGM 231 (257)
T ss_pred hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhh--hhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHH
Confidence 589998777653 4689999999999999742110 00000000 00000111223334578899999999
Q ss_pred HHHHhcCCC--CCCceEEecCCcccC
Q 022578 199 FVQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
+..++.+.. ..|+.|++.+++.++
T Consensus 232 ~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 232 ALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred HHHHhCcccccccCcEEeecCCEeCC
Confidence 999987643 358899999887653
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.3e-16 Score=128.17 Aligned_cols=195 Identities=17% Similarity=0.212 Sum_probs=130.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|++|.+++++|+++|++|++++|++.+..... ..+.+...++.++.+|+.|++++.++++. ..+|+
T Consensus 11 tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (246)
T PRK05653 11 TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-----AELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI 85 (246)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999876532111 11122234688999999999988887763 25799
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..+..++++++ . +.+++|++||.....+. .....|.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~----------~~~~~y~ 155 (246)
T PRK05653 86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN----------PGQTNYS 155 (246)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC----------CCCcHhH
Confidence 99998762 12334445444 2 66799999987543211 1112244
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..+++++++|||.++++.... ............ + ....+++++|+++++..+
T Consensus 156 ~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~~~~ 225 (246)
T PRK05653 156 AAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKE--I-------PLGRLGQPEEVANAVAFL 225 (246)
T ss_pred hHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhc--C-------CCCCCcCHHHHHHHHHHH
Confidence 78877665542 358999999999999985422 111111111111 1 114568899999999999
Q ss_pred hcCC--CCCCceEEecCCcc
Q 022578 203 LGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~ 220 (295)
+... ...++.|+++++..
T Consensus 226 ~~~~~~~~~g~~~~~~gg~~ 245 (246)
T PRK05653 226 ASDAASYITGQVIPVNGGMY 245 (246)
T ss_pred cCchhcCccCCEEEeCCCee
Confidence 8653 33578999988763
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.4e-16 Score=122.09 Aligned_cols=208 Identities=17% Similarity=0.107 Sum_probs=148.3
Q ss_pred CcCCcchHHHHH-----HHHHCC----CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCC
Q 022578 2 GGTRFIGVFLSR-----LLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG 72 (295)
Q Consensus 2 GatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 72 (295)
+++|+|+..|.. ++-+.+ |.|++++|.+.+. ++.+-..|..- +.- .
T Consensus 19 ~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-----------------ritw~el~~~G------ip~--s 73 (315)
T KOG3019|consen 19 WSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-----------------RITWPELDFPG------IPI--S 73 (315)
T ss_pred ccccchhccccCcccccccCCCCcccccceEEEecCCCCc-----------------ccccchhcCCC------Cce--e
Confidence 568888887776 333333 8999999999882 23332222211 111 4
Q ss_pred CcEEEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 73 FDVVYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 73 ~d~vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|+..+++++.| ...+..+++++. ..+.+|.+|..++|-.+....++|+++.....+
T Consensus 74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~ 153 (315)
T KOG3019|consen 74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDI 153 (315)
T ss_pred hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHH
Confidence 55555555542 224777888876 445899999999998888888999888776665
Q ss_pred c-h--hhHHHHHHhhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 129 H-K--GKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 129 ~-~--~k~~~E~~~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
. + .+++..........+.+++|.|.|.|.+.......++.-++..|.++ |+|+++++|||++|++..|..++++
T Consensus 154 ~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~li~~ale~ 230 (315)
T KOG3019|consen 154 LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLVNLIYEALEN 230 (315)
T ss_pred HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHHHHHHHHHhc
Confidence 4 2 24444444445568999999999999865321112222333346665 8999999999999999999999998
Q ss_pred CCCCCceEEecCCcccCHHHHHHHHHHHhCCCC
Q 022578 206 EKASRQVFNISGEKYVTFDGLARACAKVTGLLD 238 (295)
Q Consensus 206 ~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~~ 238 (295)
+.. .++.|-+.+++.+..|+++.+.++++++.
T Consensus 231 ~~v-~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~ 262 (315)
T KOG3019|consen 231 PSV-KGVINGVAPNPVRNGEFCQQLGSALSRPS 262 (315)
T ss_pred CCC-CceecccCCCccchHHHHHHHHHHhCCCc
Confidence 755 45999999999999999999999999883
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.6e-16 Score=128.19 Aligned_cols=197 Identities=14% Similarity=0.059 Sum_probs=127.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||++++++|+++|++|++..|......... ...+.....++.++.+|+++++++..++++ ..+|+
T Consensus 12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 87 (252)
T PRK06077 12 TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNET----LKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI 87 (252)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999988776542211000 001111223577889999999988877764 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCCC-ccch
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~~~~ 130 (295)
|||++|.. ..+..+++++ ++...+||++||...+.. ..+. .|..
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~ 156 (252)
T PRK06077 88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP-----------AYGLSIYGA 156 (252)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC-----------CCCchHHHH
Confidence 99999851 1122333333 333468999999877532 1223 3458
Q ss_pred hhHHHHHHhh----h--cCCcEEEeccCeeecCCCCCc--hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 131 GKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 131 ~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
+|...|.+++ + .++.+.+++||.+.++..... ........... .......+++++|+|++++.+
T Consensus 157 sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~dva~~~~~~ 228 (252)
T PRK06077 157 MKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--------KFTLMGKILDPEEVAEFVAAI 228 (252)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH--------hcCcCCCCCCHHHHHHHHHHH
Confidence 9998887763 2 378999999999987632110 00000000000 011123579999999999999
Q ss_pred hcCCCCCCceEEecCCcc
Q 022578 203 LGNEKASRQVFNISGEKY 220 (295)
Q Consensus 203 ~~~~~~~~~~~~i~~~~~ 220 (295)
+..+...++.|++.++..
T Consensus 229 ~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 229 LKIESITGQVFVLDSGES 246 (252)
T ss_pred hCccccCCCeEEecCCee
Confidence 987666788999998864
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.9e-16 Score=130.64 Aligned_cols=193 Identities=18% Similarity=0.153 Sum_probs=127.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.|+....... ...+.....++.++.+|+++.+++.+++++. .+|+
T Consensus 16 tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 90 (274)
T PRK07775 16 AGASSGIGAATAIELAAAGFPVALGARRVEKCEEL-----VDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV 90 (274)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999876542111 0111222246888999999999998887642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..++.++++++ . +..+||++||...+.... ....|.
T Consensus 91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 160 (274)
T PRK07775 91 LVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP----------HMGAYG 160 (274)
T ss_pred EEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----------CcchHH
Confidence 99999862 12334444442 2 456899999987764321 112355
Q ss_pred hhhHHHHHHhhh-------cCCcEEEeccCeeecCCCCC---chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 130 KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 130 ~~k~~~E~~~~~-------~~~~~~i~R~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.+|...|.+++. .|++++++|||.+.++.... .....++...... + ......+++++|+|+++
T Consensus 161 ~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~dva~a~ 233 (274)
T PRK07775 161 AAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW------G-QARHDYFLRASDLARAI 233 (274)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh------c-ccccccccCHHHHHHHH
Confidence 899999887742 38999999999886552211 1111111111110 1 11234589999999999
Q ss_pred HHHhcCCCCCCceEEec
Q 022578 200 VQVLGNEKASRQVFNIS 216 (295)
Q Consensus 200 ~~~~~~~~~~~~~~~i~ 216 (295)
+.++.++. .+.+||+.
T Consensus 234 ~~~~~~~~-~~~~~~~~ 249 (274)
T PRK07775 234 TFVAETPR-GAHVVNME 249 (274)
T ss_pred HHHhcCCC-CCCeeEEe
Confidence 99998753 34567774
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.3e-16 Score=128.50 Aligned_cols=194 Identities=19% Similarity=0.240 Sum_probs=127.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---------
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--------- 70 (295)
|||+|+||.+++++|+++|++|.++ .|+........ ..+......+.++.+|++|++++.+++++
T Consensus 12 tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~ 86 (254)
T PRK12746 12 TGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETI-----REIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV 86 (254)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence 7999999999999999999999875 46543311110 01111124588899999999999888774
Q ss_pred --CCCcEEEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 71 --KGFDVVYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 71 --~~~d~vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
.++|+|||++|.. ..++.++++++. ...++|++||..++.... .
T Consensus 87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~----------~ 156 (254)
T PRK12746 87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT----------G 156 (254)
T ss_pred CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC----------C
Confidence 2689999999862 223444444433 345899999988764221 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchH-HHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|...|.+.+ ..++++++++||.++++....... ..+.. ..... .....+++++|+|
T Consensus 157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~dva 227 (254)
T PRK12746 157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRN-FATNS--------SVFGRIGQVEDIA 227 (254)
T ss_pred CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHH-HHHhc--------CCcCCCCCHHHHH
Confidence 2235589998887652 357999999999998874311000 11111 11111 1112456899999
Q ss_pred HHHHHHhcCCC--CCCceEEecCC
Q 022578 197 RAFVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 197 ~~i~~~~~~~~--~~~~~~~i~~~ 218 (295)
+++..++.++. ..|+.|++.++
T Consensus 228 ~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 228 DAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred HHHHHHcCcccCCcCCCEEEeCCC
Confidence 99998887643 25789999776
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.4e-16 Score=128.57 Aligned_cols=198 Identities=21% Similarity=0.242 Sum_probs=132.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||..++++|+++|++|++++|++.+..+.. ..+.....++.++.+|++|.+++..+++.. .+|+
T Consensus 16 tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 90 (255)
T PRK07523 16 TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA-----ESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI 90 (255)
T ss_pred ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999876532111 111222235888999999999998888642 5899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..++.++++++. +.+++|++||....... .....|.
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------~~~~~y~ 160 (255)
T PRK07523 91 LVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR----------PGIAPYT 160 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC----------CCCccHH
Confidence 99999862 223444555542 46799999987653211 1112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|...+.+.+ .+|+++.++|||.+.++...... ...+...+....+ ...+..++|+|++++.
T Consensus 161 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~ 231 (255)
T PRK07523 161 ATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGKVEELVGACVF 231 (255)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence 89998887763 46899999999999988532110 1111122222211 1235679999999999
Q ss_pred HhcCCC--CCCceEEecCCcccC
Q 022578 202 VLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~~~~t 222 (295)
++.+.. ..|..+++.++..+|
T Consensus 232 l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 232 LASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred HcCchhcCccCcEEEECCCeecc
Confidence 987532 357889998876544
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2e-15 Score=128.60 Aligned_cols=199 Identities=19% Similarity=0.237 Sum_probs=132.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++..++.+...... ....+.....++.++.+|+++.+++.+++++. ++|+
T Consensus 61 TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 137 (300)
T PRK06128 61 TGADSGIGRATAIAFAREGADIALNYLPEEEQDAAE---VVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDI 137 (300)
T ss_pred ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHH---HHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999998877643311000 01111222346788999999999888877642 7899
Q ss_pred EEEcccCC---------------------hhcHHHHHHhC----CCCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE---------------------ADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||++|.. ..++.++++++ ....++|++||...|..... ...|..
T Consensus 138 lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------~~~Y~a 207 (300)
T PRK06128 138 LVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT----------LLDYAS 207 (300)
T ss_pred EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC----------chhHHH
Confidence 99999852 22344455554 33459999999887643221 123558
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
+|...+.+++ ..|+++.+++||.+.++.... ..............+ ...+..++|+|.+++.+
T Consensus 208 sK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~~~~l 278 (300)
T PRK06128 208 TKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP---------MKRPGQPVEMAPLYVLL 278 (300)
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC---------CCCCcCHHHHHHHHHHH
Confidence 9998887763 358999999999999985321 111122222212111 12346799999999998
Q ss_pred hcCCC--CCCceEEecCCccc
Q 022578 203 LGNEK--ASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~~~ 221 (295)
+.... ..|+.|++.++..+
T Consensus 279 ~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 279 ASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred hCccccCccCcEEeeCCCEeC
Confidence 87533 35789999988654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.2e-16 Score=128.22 Aligned_cols=204 Identities=13% Similarity=0.088 Sum_probs=131.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc--CCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+|+||.+++++|+++|++|++++|+........ ..+.... ..+.++.+|+++.+++..++++ ..+
T Consensus 8 tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 82 (259)
T PRK12384 8 IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVA-----QEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV 82 (259)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999865422111 0111111 3588999999999888877764 268
Q ss_pred cEEEEcccC--------------------ChhcHHHHH----HhCC--C-CCcEEEeecccc-ccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGR--------------------EADEVEPIL----DALP--N-LEQFIYCSSAGV-YLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~--------------------~~~~~~~ll----~~~~--~-~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~p 125 (295)
|+|||++|. |..++.+++ ..+. + ..++|++||... ++.. ..
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~-----------~~ 151 (259)
T PRK12384 83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK-----------HN 151 (259)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-----------CC
Confidence 999999975 222333333 3332 3 358999998642 2211 11
Q ss_pred CccchhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHH--cCCCcccCCCCCceeeeeeHHHHH
Q 022578 126 KSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 126 ~~~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
..|..+|+..+.++ ...|+++..+|||.++++......+..+..... .++......++.....+++++|++
T Consensus 152 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~ 231 (259)
T PRK12384 152 SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVL 231 (259)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHH
Confidence 23558899876665 247899999999998876542222222211110 000001111223345678999999
Q ss_pred HHHHHHhcCCC--CCCceEEecCCcc
Q 022578 197 RAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 197 ~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
++++.++.+.. ..|+.|++.+++.
T Consensus 232 ~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 232 NMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred HHHHHHcCcccccccCceEEEcCCEE
Confidence 99999887542 3578899988764
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.5e-15 Score=124.16 Aligned_cols=197 Identities=18% Similarity=0.252 Sum_probs=130.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|......... ...+.....++.++.+|+++++++.++++.. .+|+
T Consensus 8 tG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (256)
T PRK12745 8 TGGRRGIGLGIARALAAAGFDLAINDRPDDEELAAT----QQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC 83 (256)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999998754311110 0011112246889999999998888777642 6899
Q ss_pred EEEcccCC----------------------hhcHHHHHHhCC-------C-----CCcEEEeeccccccCCCCCCCCCCC
Q 022578 76 VYDINGRE----------------------ADEVEPILDALP-------N-----LEQFIYCSSAGVYLKSDLLPHCETD 121 (295)
Q Consensus 76 vi~~a~~~----------------------~~~~~~ll~~~~-------~-----~~~~i~~Ss~~v~~~~~~~~~~e~~ 121 (295)
|||++|.. ..++.++++++. + ..++|++||...+.+..
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------- 155 (256)
T PRK12745 84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP-------- 155 (256)
T ss_pred EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC--------
Confidence 99999751 223444444431 1 46799999977642211
Q ss_pred CCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 122 ~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
....|..+|...|.+++ ..+++++++|||.++++..... ...+......+ ..+ ...+.++.|
T Consensus 156 --~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~-~~~-------~~~~~~~~d 224 (256)
T PRK12745 156 --NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV-TAKYDALIAKG-LVP-------MPRWGEPED 224 (256)
T ss_pred --CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc-chhHHhhhhhc-CCC-------cCCCcCHHH
Confidence 12335589999887763 3689999999999998754221 11111111111 111 124568999
Q ss_pred HHHHHHHHhcCCC--CCCceEEecCCcc
Q 022578 195 LARAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 195 ~a~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
+++++..++.... ..|..|++.++..
T Consensus 225 ~a~~i~~l~~~~~~~~~G~~~~i~gg~~ 252 (256)
T PRK12745 225 VARAVAALASGDLPYSTGQAIHVDGGLS 252 (256)
T ss_pred HHHHHHHHhCCcccccCCCEEEECCCee
Confidence 9999999886532 3578999988754
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.6e-16 Score=129.58 Aligned_cols=200 Identities=14% Similarity=0.112 Sum_probs=129.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--ccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+|++|.++++.|+++|++|++++|+++....... .... ...+++++.+|++|++++.. ++. ..+
T Consensus 9 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~i 82 (280)
T PRK06914 9 TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLS-----QATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRI 82 (280)
T ss_pred ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCe
Confidence 7999999999999999999999999998765321110 0011 11468899999999988876 542 268
Q ss_pred cEEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|+|||++|.. ..++.+++++ ++ +..++|++||...+.+. .....
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------~~~~~ 152 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF----------PGLSP 152 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC----------CCCch
Confidence 9999998852 2233344444 44 56799999986543211 11123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc------------hHHHHHHHHHcCCCcccCCCCCceee
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------VEEWFFHRLKAGRPIPIPGSGIQVTQ 188 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
|..+|...+.+++ ..+++++++|||.++++..... .....+..+.. ... .....
T Consensus 153 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~ 225 (280)
T PRK06914 153 YVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK-----HIN--SGSDT 225 (280)
T ss_pred hHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH-----HHh--hhhhc
Confidence 4588998887663 3589999999999988732100 00001111110 000 11235
Q ss_pred eeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHH
Q 022578 189 LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224 (295)
Q Consensus 189 ~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~ 224 (295)
+++++|+|++++.++.++... ..|+++++..+++.
T Consensus 226 ~~~~~dva~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 260 (280)
T PRK06914 226 FGNPIDVANLIVEIAESKRPK-LRYPIGKGVKLMIL 260 (280)
T ss_pred cCCHHHHHHHHHHHHcCCCCC-cccccCCchHHHHH
Confidence 688999999999999987653 57888766554443
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.2e-15 Score=128.57 Aligned_cols=187 Identities=18% Similarity=0.145 Sum_probs=122.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++...... .....++.++.+|++|.+++..+++.. .+|+
T Consensus 10 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~--------~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 10 TGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFE--------ALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHH--------hhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999876532111 111246888999999999988877642 5899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..++.+++++ ++ +..++|++||...+...+ ....|.
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~----------~~~~Y~ 151 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP----------GIGYYC 151 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC----------CcchhH
Confidence 99999862 2245556665 32 556899999977643211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC------chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
.+|+..|.+++ ..|++++++|||.+.++.... .....+...............+ ..+.+++|+|
T Consensus 152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dva 228 (277)
T PRK06180 152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG---KQPGDPAKAA 228 (277)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc---CCCCCHHHHH
Confidence 89998887653 258999999999998763211 0011111100000000000111 2346799999
Q ss_pred HHHHHHhcCCCC
Q 022578 197 RAFVQVLGNEKA 208 (295)
Q Consensus 197 ~~i~~~~~~~~~ 208 (295)
++++.++..+..
T Consensus 229 ~~~~~~l~~~~~ 240 (277)
T PRK06180 229 QAILAAVESDEP 240 (277)
T ss_pred HHHHHHHcCCCC
Confidence 999999987644
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.5e-15 Score=124.12 Aligned_cols=198 Identities=15% Similarity=0.114 Sum_probs=129.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--ccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||.++++.|+++|++|+++.|++++...... .+.. ....+.++.+|++|++++.+++++. .+
T Consensus 10 tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i 84 (256)
T PRK09186 10 TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLE-----SLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI 84 (256)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHH-----HHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence 7999999999999999999999999998765321110 0000 0134667899999999998888742 38
Q ss_pred cEEEEcccCC-----------------------hh----cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCC-C
Q 022578 74 DVVYDINGRE-----------------------AD----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT-V 123 (295)
Q Consensus 74 d~vi~~a~~~-----------------------~~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~-~ 123 (295)
|+|||+++.. .. .++.++++++ +.+++|++||...+..... ...+..+ .
T Consensus 85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~ 163 (256)
T PRK09186 85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTSMT 163 (256)
T ss_pred cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccccccC
Confidence 9999998631 11 1344555554 5679999999765432211 1112222 2
Q ss_pred CCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 124 ~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
.+..|..+|...+.+.+ ..++++++++||.++++.. ..+........ + ...+++++|+|
T Consensus 164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~~~~~~~~~~----~-----~~~~~~~~dva 229 (256)
T PRK09186 164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EAFLNAYKKCC----N-----GKGMLDPDDIC 229 (256)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HHHHHHHHhcC----C-----ccCCCCHHHhh
Confidence 23345689988887753 3679999999998876531 11222221111 1 12468899999
Q ss_pred HHHHHHhcCCC--CCCceEEecCC
Q 022578 197 RAFVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 197 ~~i~~~~~~~~--~~~~~~~i~~~ 218 (295)
++++.++.+.. ..|..+.+.++
T Consensus 230 ~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 230 GTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred hhHhheeccccccccCceEEecCC
Confidence 99999997543 24677777765
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-15 Score=125.58 Aligned_cols=195 Identities=18% Similarity=0.202 Sum_probs=128.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||.+++++|+++|++|+++ .|+.....+. ...+.....++.++.+|++|++++..++++. .+|
T Consensus 10 tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (250)
T PRK08063 10 TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEET-----AEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD 84 (250)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999998874 5665432111 0111222346888999999999988888753 689
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCC-c
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~ 127 (295)
+|||++|.. ..++.++++++ . +.++||++||...+.. ..+. .
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~ 153 (250)
T PRK08063 85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-----------LENYTT 153 (250)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCCccH
Confidence 999999852 12233344443 2 4569999999765321 1122 3
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|...|.+++ ..+++++.++||.+..+.... .....+........+ ...+++++|+|+++
T Consensus 154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~ 224 (250)
T PRK08063 154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRMVEPEDVANAV 224 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCCcCHHHHHHHH
Confidence 4599999998864 368999999999998764211 000111111111111 12368899999999
Q ss_pred HHHhcCCC--CCCceEEecCCcc
Q 022578 200 VQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
+.++.++. ..|+.+++.++..
T Consensus 225 ~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 225 LFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred HHHcCchhcCccCCEEEECCCee
Confidence 99987643 3578888888754
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.7e-16 Score=128.55 Aligned_cols=194 Identities=15% Similarity=0.176 Sum_probs=127.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.|+......... .+. ...++.++.+|++|++++.+++++. ++|+
T Consensus 11 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 84 (252)
T PRK06138 11 TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAA-----AIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV 84 (252)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHH-----HHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998654221110 011 1245889999999999998887642 7899
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..++ +.++.+++ +.+++|++||...+.+.. ....|.
T Consensus 85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------~~~~Y~ 154 (252)
T PRK06138 85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR----------GRAAYV 154 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC----------CccHHH
Confidence 99999852 1122 33444444 567999999976532211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch----HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
.+|...+.+++ ..+++++++|||.++++...... ..........+ ......+++++|+|++
T Consensus 155 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~d~a~~ 226 (252)
T PRK06138 155 ASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRA--------RHPMNRFGTAEEVAQA 226 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHh--------cCCCCCCcCHHHHHHH
Confidence 88988887763 24899999999999988431100 00000000000 0111236789999999
Q ss_pred HHHHhcCCC--CCCceEEecCC
Q 022578 199 FVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~ 218 (295)
++.++.++. ..|..+.+.++
T Consensus 227 ~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 227 ALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred HHHHcCchhcCccCCEEEECCC
Confidence 999987743 24667777665
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.8e-15 Score=123.36 Aligned_cols=196 Identities=21% Similarity=0.187 Sum_probs=125.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|+...++........ ...+.....++.++.+|++|.+++.++++.. .+|+
T Consensus 8 tG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 83 (248)
T PRK06123 8 TGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAV----VQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA 83 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHH----HHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999887765432211100 1111222345788999999999988887642 6899
Q ss_pred EEEcccCCh---------------------hcHHHHHHhCC-----C----CCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 76 VYDINGREA---------------------DEVEPILDALP-----N----LEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 76 vi~~a~~~~---------------------~~~~~ll~~~~-----~----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|||+++... .++.++++++. . ..++|++||...+..... ..
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------~~ 154 (248)
T PRK06123 84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG---------EY 154 (248)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC---------Cc
Confidence 999998631 12333444432 1 236999999754321110 01
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..|..+|+..|.+++ ..+++++++|||.+++|..................++.. ..+++|++++
T Consensus 155 ~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~d~a~~ 225 (248)
T PRK06123 155 IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGR---------GGTAEEVARA 225 (248)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCC---------CcCHHHHHHH
Confidence 236699999888763 348999999999999985322112222222322222211 1368999999
Q ss_pred HHHHhcCCC--CCCceEEecCC
Q 022578 199 FVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~ 218 (295)
++.++.... ..|+.|++.++
T Consensus 226 ~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 226 ILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHHHhCccccCccCCEEeecCC
Confidence 999887532 45788988765
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.9e-15 Score=124.19 Aligned_cols=195 Identities=18% Similarity=0.183 Sum_probs=129.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+........ ..+.+...++.++.+|+++.+++.++++. ..+|+
T Consensus 9 tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~ 83 (250)
T TIGR03206 9 TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA-----ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV 83 (250)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998875522110 11122234688999999999998888763 25899
Q ss_pred EEEcccC--------------------ChhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGR--------------------EADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++. |..+..+++++ ++ +.+++|++||...+..... ...|.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~----------~~~Y~ 153 (250)
T TIGR03206 84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG----------EAVYA 153 (250)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC----------CchHH
Confidence 9999984 12233344333 33 5679999999887654321 12355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-----hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
.+|++.+.+.+ ..+++++++|||.++++..... ....+........+. ..+..++|+|+
T Consensus 154 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~ 224 (250)
T TIGR03206 154 ACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL---------GRLGQPDDLPG 224 (250)
T ss_pred HHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------cCCcCHHHHHH
Confidence 88887776653 2489999999999998742110 001111222221111 12356899999
Q ss_pred HHHHHhcCCC--CCCceEEecCCc
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
++..++..+. ..|+.++++++.
T Consensus 225 ~~~~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 225 AILFFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred HHHHHcCcccCCCcCcEEEeCCCc
Confidence 9999887642 357889988763
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.6e-15 Score=124.61 Aligned_cols=200 Identities=17% Similarity=0.165 Sum_probs=126.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++....... ... ..++.++.+|++|++++..++++ .++|+
T Consensus 17 tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (264)
T PRK12829 17 TGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA-----RLP--GAKVTATVADVADPAQVERVFDTAVERFGGLDV 89 (264)
T ss_pred eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 7999999999999999999999999998654221100 000 01468899999999998887764 27899
Q ss_pred EEEcccCC-h--------------------hcHHHHHHhC----C--CC-CcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE-A--------------------DEVEPILDAL----P--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~-~--------------------~~~~~ll~~~----~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|||++|.. . .++.++++++ . +. ++++++||.......+ ....
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~----------~~~~ 159 (264)
T PRK12829 90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYP----------GRTP 159 (264)
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCC----------CCch
Confidence 99999863 1 1334444443 3 33 5688888754321110 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCc-cc---CCCCCceeeeeeHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PI---PGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~i~~~D~a 196 (295)
|..+|...|.+++ ..+++++++|||.++++..... ....... .+... .. .........+++++|+|
T Consensus 160 y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~a 236 (264)
T PRK12829 160 YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV-IEARAQQ--LGIGLDEMEQEYLEKISLGRMVEPEDIA 236 (264)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH-hhhhhhc--cCCChhHHHHHHHhcCCCCCCCCHHHHH
Confidence 5588998887763 2589999999999999853111 1100000 00000 00 00000122479999999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCcc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+++..++... ...++.|+++++..
T Consensus 237 ~~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 237 ATALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred HHHHHHcCccccCccCcEEEeCCCcc
Confidence 9999988642 34678999988753
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.6e-15 Score=122.32 Aligned_cols=195 Identities=16% Similarity=0.213 Sum_probs=127.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.|........... ...++.....++.++.+|+.+++++.++++. .++|+
T Consensus 12 tGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 90 (249)
T PRK12827 12 TGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADA-VAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDI 90 (249)
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999988754331111100 0011122234688999999999998888753 36899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC-------CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||++|.. ..++.++++++. +..++|++||...+.+.. ....|
T Consensus 91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~y 160 (249)
T PRK12827 91 LVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNR----------GQVNY 160 (249)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCC----------CCchh
Confidence 99999862 223444555432 557899999977653311 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+++ ..+++++++|||.+.++........ .......+. ..+.+++|++++++.
T Consensus 161 ~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~---------~~~~~~~~va~~~~~ 228 (249)
T PRK12827 161 AASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPV---------QRLGEPDEVAALVAF 228 (249)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCC---------cCCcCHHHHHHHHHH
Confidence 588887776653 3589999999999999864332211 111111111 123478999999999
Q ss_pred HhcCCC--CCCceEEecCC
Q 022578 202 VLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~ 218 (295)
++.+.. ..|+.+++.++
T Consensus 229 l~~~~~~~~~g~~~~~~~g 247 (249)
T PRK12827 229 LVSDAASYVTGQVIPVDGG 247 (249)
T ss_pred HcCcccCCccCcEEEeCCC
Confidence 886532 34778888765
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=126.47 Aligned_cols=195 Identities=15% Similarity=0.168 Sum_probs=128.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|++|.+++++|+++|++|++++|++........ .+.. ..++.++.+|+.|++++..++++. .+|+
T Consensus 11 tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 84 (251)
T PRK07231 11 TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA-----EILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDI 84 (251)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 7999999999999999999999999999865321111 0011 245889999999999998887643 6899
Q ss_pred EEEcccCCh---------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGREA---------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~~---------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||+++... .+ ++.+++.+. +.++||++||...+..... ...|
T Consensus 85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------~~~y 154 (251)
T PRK07231 85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG----------LGWY 154 (251)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC----------chHH
Confidence 999998621 11 333444443 5678999999877543211 1124
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchH---HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..+|...+.+.+ ..+++++.++||.+.++....... .......... .....+++++|+|++
T Consensus 155 ~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~ 225 (251)
T PRK07231 155 NASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT---------IPLGRLGTPEDIANA 225 (251)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC---------CCCCCCcCHHHHHHH
Confidence 488887776653 348999999999987764211110 0111111111 112346799999999
Q ss_pred HHHHhcCCC--CCCceEEecCCcc
Q 022578 199 FVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
++.++.... ..|..+.+.++..
T Consensus 226 ~~~l~~~~~~~~~g~~~~~~gg~~ 249 (251)
T PRK07231 226 ALFLASDEASWITGVTLVVDGGRC 249 (251)
T ss_pred HHHHhCccccCCCCCeEEECCCcc
Confidence 999997543 2466777776643
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.8e-15 Score=120.99 Aligned_cols=195 Identities=19% Similarity=0.248 Sum_probs=127.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|++|.++++.|+++|++|+++.|++....... ...+.....++.++.+|+++.+++.+++++ .++|+
T Consensus 11 tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 86 (248)
T PRK05557 11 TGASRGIGRAIAERLAAQGANVVINYASSEAGAEAL----VAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDI 86 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999998888765311110 011112234688899999999998887764 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------CCCcEEEeecccc-ccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||+++.. ..++.++++++. +.++||++||... ++.. ....|
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~-----------~~~~y 155 (248)
T PRK05557 87 LVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP-----------GQANY 155 (248)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC-----------CCchh
Confidence 99999852 223444554442 4568999998643 2221 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+++ ..++++++++||.+.++.... ....+........+. ..+.+++|+++++..
T Consensus 156 ~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~ 225 (248)
T PRK05557 156 AASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA-LPEDVKEAILAQIPL---------GRLGQPEEIASAVAF 225 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc-cChHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence 588887776553 358999999999886653211 112222222222111 134688999999998
Q ss_pred HhcC--CCCCCceEEecCCcc
Q 022578 202 VLGN--EKASRQVFNISGEKY 220 (295)
Q Consensus 202 ~~~~--~~~~~~~~~i~~~~~ 220 (295)
++.. ....++.|+++++..
T Consensus 226 l~~~~~~~~~g~~~~i~~~~~ 246 (248)
T PRK05557 226 LASDEAAYITGQTLHVNGGMV 246 (248)
T ss_pred HcCcccCCccccEEEecCCcc
Confidence 8865 334678999987643
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.9e-15 Score=125.18 Aligned_cols=213 Identities=14% Similarity=0.122 Sum_probs=134.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||+++++.|+++|++|++.+|+.+...+.. .++.....++.++.+|++|.+++.++++.. .+|+
T Consensus 12 TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 86 (275)
T PRK05876 12 TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-----NHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDV 86 (275)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998875532111 111222245788999999999998887642 5899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhC-----C-C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR--------------------EADEVEPILDAL-----P-N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~-----~-~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|. |..++.++++++ + + ..++|++||...+.... ....|
T Consensus 87 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 156 (275)
T PRK05876 87 VFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA----------GLGAY 156 (275)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC----------CCchH
Confidence 9999985 222344555553 1 2 46899999987653211 11234
Q ss_pred chhhHHHHHH----h---hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESV----L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~----~---~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+ . ...|+++++++||.+.++...... ...............++......++++++|+|+.++.
T Consensus 157 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 235 (275)
T PRK05876 157 GVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE-RIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTAD 235 (275)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh-hhcCccccccccccccccccccccCCCHHHHHHHHHH
Confidence 5888864433 3 245899999999998887432110 0000000011111222333344678999999999999
Q ss_pred HhcCCCCCCceEEecCCcccCHHHHHHHHHHHhC
Q 022578 202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 202 ~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
.+.++ +.+.+.+. ..+..+.+...+...
T Consensus 236 ai~~~----~~~~~~~~--~~~~~~~~~~~~~~~ 263 (275)
T PRK05876 236 AILAN----RLYVLPHA--ASRASIRRRFERIDR 263 (275)
T ss_pred HHHcC----CeEEecCh--hhHHHHHHHHHHHHH
Confidence 98764 34545432 455555555555443
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=123.36 Aligned_cols=196 Identities=19% Similarity=0.226 Sum_probs=131.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ ...+.....++.++.+|+++.+.+..+++. .++|+
T Consensus 52 tGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~ 127 (290)
T PRK06701 52 TGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANET----KQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDI 127 (290)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHH----HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998764311111 011112224678899999999998888764 26899
Q ss_pred EEEcccCC---------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE---------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
|||+++.. ..+..++++++. ...++|++||...|..... ...|..
T Consensus 128 lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------~~~Y~~ 197 (290)
T PRK06701 128 LVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------LIDYSA 197 (290)
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC----------cchhHH
Confidence 99999851 223444555543 3368999999887643221 123558
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|...+.+.+ ..+++++.++||.++.+................ ......+.+++|+|++++.++
T Consensus 198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ll 268 (290)
T PRK06701 198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGS---------NTPMQRPGQPEELAPAYVFLA 268 (290)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHc
Confidence 8888877653 358999999999999875322111111111111 111234678999999999998
Q ss_pred cCCC--CCCceEEecCCc
Q 022578 204 GNEK--ASRQVFNISGEK 219 (295)
Q Consensus 204 ~~~~--~~~~~~~i~~~~ 219 (295)
.... ..|..+++.++.
T Consensus 269 ~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 269 SPDSSYITGQMLHVNGGV 286 (290)
T ss_pred CcccCCccCcEEEeCCCc
Confidence 7642 357788888764
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=126.54 Aligned_cols=193 Identities=16% Similarity=0.123 Sum_probs=124.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...... ..+++++.+|++|.+++.++++.. ++|+
T Consensus 9 tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-----------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 9 TGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-----------SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999876532111 135889999999999998888642 7999
Q ss_pred EEEcccCCh--------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|... .+ ++.++..++ +..++|++||...+.... ....|.
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 147 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTP----------LGAWYH 147 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCC----------CccHhH
Confidence 999998631 12 345555554 567999999966421110 112245
Q ss_pred hhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCc--------ccCCCCCceeeeeeHHH
Q 022578 130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI--------PIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 130 ~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~D 194 (295)
.+|...+.+. +..+++++++|||.+.++..... ...+... ..+... ...........+.+++|
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIA-ADHLLKT-SGNGAYAEQAQAVAASMRSTYGSGRLSDPSV 225 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhh-hhhhccc-ccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence 8999888764 34689999999999988743110 0000000 000000 00001111234568899
Q ss_pred HHHHHHHHhcCCCCCCceEEecC
Q 022578 195 LARAFVQVLGNEKASRQVFNISG 217 (295)
Q Consensus 195 ~a~~i~~~~~~~~~~~~~~~i~~ 217 (295)
+|++++.++..... ...|.++.
T Consensus 226 vA~~i~~~~~~~~~-~~~~~~g~ 247 (273)
T PRK06182 226 IADAISKAVTARRP-KTRYAVGF 247 (273)
T ss_pred HHHHHHHHHhCCCC-CceeecCc
Confidence 99999998875432 33565544
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-15 Score=124.12 Aligned_cols=190 Identities=17% Similarity=0.208 Sum_probs=129.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|+||.++++.|+++|++|++++|++++.... .. ..++.++.+|+++.+.+.++++.. .+|+|||+
T Consensus 15 tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---------~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 15 TGASSGIGRACAVALAQRGARVVAAARNAAALDRL---------AG-ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HH-HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 69999999999999999999999999987552211 11 124678899999999988888743 48999999
Q ss_pred ccCC--------------------hhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 80 NGRE--------------------ADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 80 a~~~--------------------~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
++.. ..++.++++++. + ..+||++||...+.... ....|..+|
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~y~~sK 154 (245)
T PRK07060 85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP----------DHLAYCASK 154 (245)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC----------CCcHhHHHH
Confidence 9852 223444555442 2 36899999987653321 122355999
Q ss_pred HHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 133 ~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
..+|.+++ ..+++++.+|||.++++...... .......+.... ....+++++|+|+++..++.
T Consensus 155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~a~~~~~l~~ 225 (245)
T PRK07060 155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI---------PLGRFAEVDDVAAPILFLLS 225 (245)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcC
Confidence 99888763 34799999999999988532110 000111111110 12347899999999999997
Q ss_pred CCC--CCCceEEecCCc
Q 022578 205 NEK--ASRQVFNISGEK 219 (295)
Q Consensus 205 ~~~--~~~~~~~i~~~~ 219 (295)
.+. ..|+.+++.++.
T Consensus 226 ~~~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 226 DAASMVSGVSLPVDGGY 242 (245)
T ss_pred cccCCccCcEEeECCCc
Confidence 643 357888887764
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.6e-15 Score=121.30 Aligned_cols=196 Identities=15% Similarity=0.126 Sum_probs=132.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|++.+..... ..+.+...++.++.+|+++++++.++++. .++|+
T Consensus 13 tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 87 (250)
T PRK12939 13 TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELA-----AALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG 87 (250)
T ss_pred eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999998876532111 11122234688999999999999888864 27999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..+..++++++. +..++|++||...+.... ....|.
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~y~ 157 (250)
T PRK12939 88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP----------KLGAYV 157 (250)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC----------CcchHH
Confidence 99999862 123344544432 355999999976543211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...|.+++ ..+++++.++||.+..+.........+......+. ....+++++|+|++++.+
T Consensus 158 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l 228 (250)
T PRK12939 158 ASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGR---------ALERLQVPDDVAGAVLFL 228 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcC---------CCCCCCCHHHHHHHHHHH
Confidence 88998887763 35799999999998877432111111222222221 123457899999999999
Q ss_pred hcCC--CCCCceEEecCCcc
Q 022578 203 LGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~ 220 (295)
+..+ ...|+.+.+.++..
T Consensus 229 ~~~~~~~~~G~~i~~~gg~~ 248 (250)
T PRK12939 229 LSDAARFVTGQLLPVNGGFV 248 (250)
T ss_pred hCccccCccCcEEEECCCcc
Confidence 8753 24688898888754
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=6e-15 Score=122.43 Aligned_cols=195 Identities=16% Similarity=0.120 Sum_probs=126.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||..++++|+++|++|++++|+... . ...++.++++|+.+.+++.+++++ ..+|+
T Consensus 14 tGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 14 TGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---Q-----------EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEecchhh---h-----------cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998611 0 124688999999999999888764 25899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..+...+++++ . +..++|++||....... .....|.
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------~~~~~Y~ 149 (252)
T PRK08220 80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR----------IGMAAYG 149 (252)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC----------CCCchhH
Confidence 99998862 12233345443 2 44689999997653211 1112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHH-HHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|...+.+++ ..++++++++||.++++........ ........+.. ...........+++++|+|++++.
T Consensus 150 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~ 228 (252)
T PRK08220 150 ASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFP-EQFKLGIPLGKIARPQEIANAVLF 228 (252)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHH-HHHhhcCCCcccCCHHHHHHHHHH
Confidence 89998887762 3689999999999999843110000 00000000000 000011122356889999999999
Q ss_pred HhcCC--CCCCceEEecCCcc
Q 022578 202 VLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~ 220 (295)
++... ...++.+.+.++..
T Consensus 229 l~~~~~~~~~g~~i~~~gg~~ 249 (252)
T PRK08220 229 LASDLASHITLQDIVVDGGAT 249 (252)
T ss_pred HhcchhcCccCcEEEECCCee
Confidence 98753 34567777777643
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.9e-15 Score=120.10 Aligned_cols=182 Identities=16% Similarity=0.146 Sum_probs=123.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|++|..+++.|+++ ++|++++|++.+... +.+...+++++.+|++|.+++.++++.. ++|+|||+
T Consensus 9 tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 9 TGASRGIGAAIARELAPT-HTLLLGGRPAERLDE---------LAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH---------HHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 699999999999999999 999999998655211 1111246889999999999999988743 59999999
Q ss_pred ccCChh--------------------c----HHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHH
Q 022578 80 NGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN 134 (295)
Q Consensus 80 a~~~~~--------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~ 134 (295)
++.... + +++++++++ ..+++|++||...++...+ ...|..+|..
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~----------~~~y~~~K~a 148 (227)
T PRK08219 79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPG----------WGSYAASKFA 148 (227)
T ss_pred CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCC----------CchHHHHHHH
Confidence 986211 1 344555555 5679999999876543211 1235588888
Q ss_pred HHHHhhh-----cC-CcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 022578 135 TESVLES-----KG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 135 ~E~~~~~-----~~-~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
.+.+++. .+ +++..++||.+.++.. ..+... .+... ....+++++|+|++++.+++++.
T Consensus 149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~-----~~~~~~--~~~~~-------~~~~~~~~~dva~~~~~~l~~~~- 213 (227)
T PRK08219 149 LRALADALREEEPGNVRVTSVHPGRTDTDMQ-----RGLVAQ--EGGEY-------DPERYLRPETVAKAVRFAVDAPP- 213 (227)
T ss_pred HHHHHHHHHHHhcCCceEEEEecCCccchHh-----hhhhhh--hcccc-------CCCCCCCHHHHHHHHHHHHcCCC-
Confidence 7776532 24 8899999987665521 111110 11111 12356999999999999998754
Q ss_pred CCceEEecC
Q 022578 209 SRQVFNISG 217 (295)
Q Consensus 209 ~~~~~~i~~ 217 (295)
.+.++++.-
T Consensus 214 ~~~~~~~~~ 222 (227)
T PRK08219 214 DAHITEVVV 222 (227)
T ss_pred CCccceEEE
Confidence 345666643
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.8e-15 Score=121.60 Aligned_cols=195 Identities=15% Similarity=0.138 Sum_probs=127.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++....... .++.....++.++.+|++|.+++..++++. .+|+
T Consensus 11 tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~ 85 (258)
T PRK07890 11 SGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA-----AEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA 85 (258)
T ss_pred ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence 799999999999999999999999999875522111 111222246889999999999988777642 6899
Q ss_pred EEEcccCC---------------------hhcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE---------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..++..+++++. ...++|++||...+.... ....|.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------~~~~Y~ 155 (258)
T PRK07890 86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP----------KYGAYK 155 (258)
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC----------CcchhH
Confidence 99999752 112344444542 335899999976542211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch----------HHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (295)
.+|...+.+++ ..++++++++||.++++.....+ ...+.....+. .....+.++
T Consensus 156 ~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 226 (258)
T PRK07890 156 MAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPTD 226 (258)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCCH
Confidence 88988887764 24799999999999998421100 01111111111 112235789
Q ss_pred HHHHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 193 KDLARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 193 ~D~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+|++++++.++.+. ...|+.+.+.++.
T Consensus 227 ~dva~a~~~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 227 DEVASAVLFLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred HHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence 99999999988752 2356677776654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5e-15 Score=125.39 Aligned_cols=196 Identities=14% Similarity=0.126 Sum_probs=128.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+.+...... ..+.....++.++.+|++|.+++.++++.. .+|+
T Consensus 12 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~ 86 (287)
T PRK06194 12 TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAV-----AELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHL 86 (287)
T ss_pred eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999765422111 111111245788999999999998888642 5899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--C------CCcEEEeeccccccCCCCCCCCCCCCC
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--N------LEQFIYCSSAGVYLKSDLLPHCETDTV 123 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~------~~~~i~~Ss~~v~~~~~~~~~~e~~~~ 123 (295)
|||+||.. ..++.+++++ +. + ..++|++||...+....
T Consensus 87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 156 (287)
T PRK06194 87 LFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP---------- 156 (287)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----------
Confidence 99999862 2234443333 22 2 25899999987654321
Q ss_pred CCCccchhhHHHHHHhhh---------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 124 DPKSRHKGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 124 ~p~~~~~~k~~~E~~~~~---------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
....|..+|+..+.+++. .++++..+.||.+..+- .....+++..+.+++.+.+++++++|
T Consensus 157 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T PRK06194 157 AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI----------WQSERNRPADLANTAPPTRSQLIAQA 226 (287)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc----------ccccccCchhcccCccccchhhHHHH
Confidence 112355899998887632 23666677776655441 11223445555667777888888888
Q ss_pred HHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 195 LARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 195 ~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.+..+.... .++..|+++.+.+.....
T Consensus 227 ~~~~~~~~~----------------~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 227 MSQKAVGSG----------------KVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred HHHhhhhcc----------------CCCHHHHHHHHHHHHHcC
Confidence 777653211 168888888888876543
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.2e-14 Score=116.72 Aligned_cols=183 Identities=21% Similarity=0.221 Sum_probs=124.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----CCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v 76 (295)
|||+|+||.+++++|+++|++|++++|+.... ...+++.+|+++.+++.+++++ .++|+|
T Consensus 9 tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v 72 (234)
T PRK07577 9 TGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FPGELFACDLADIEQTAATLAQINEIHPVDAI 72 (234)
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence 69999999999999999999999999987651 1235789999999887776653 378999
Q ss_pred EEcccCCh--------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 77 YDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 77 i~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
||+++... .+ .+.++.+++ +..++|++||...|+... ...|..
T Consensus 73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~Y~~ 141 (234)
T PRK07577 73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD-----------RTSYSA 141 (234)
T ss_pred EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC-----------chHHHH
Confidence 99998621 12 233344444 567999999987664321 223558
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc--hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
+|...|.+.+ ..+++++++|||.+..+..... .............+ ......++|+|++++.
T Consensus 142 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~ 212 (234)
T PRK07577 142 AKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP---------MRRLGTPEEVAAAIAF 212 (234)
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC---------CCCCcCHHHHHHHHHH
Confidence 8988877653 3589999999999988742110 00111111111111 1123468999999999
Q ss_pred HhcCCC--CCCceEEecCCc
Q 022578 202 VLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~~ 219 (295)
++..+. ..|..+.+.++.
T Consensus 213 l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 213 LLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred HhCcccCCccceEEEecCCc
Confidence 987642 357788887654
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=119.11 Aligned_cols=195 Identities=18% Similarity=0.188 Sum_probs=129.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|++|+.++++|+++|++|++++|++....... ..+. ...+++++.+|+++.+++.+++++. .+|++||+
T Consensus 3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAA-----RALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999999999999999865422110 0011 1246889999999999999999854 47999999
Q ss_pred ccCC--------------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cchhhHHHH
Q 022578 80 NGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTE 136 (295)
Q Consensus 80 a~~~--------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~~k~~~E 136 (295)
++.. ..+..+++++.. +..++|++||...+.... +.+ |..+|...+
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~-----------~~~~Y~~sK~a~~ 145 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSA-----------SGVLQGAINAALE 145 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCC-----------cchHHHHHHHHHH
Confidence 9852 112344555333 567999999988764321 222 448999988
Q ss_pred HHhhh-----cCCcEEEeccCeeecCCCCC---chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 022578 137 SVLES-----KGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 137 ~~~~~-----~~~~~~i~R~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
.+.+. .+++++.++||.+-.+.... .....+........+ . ..+..++|+|++++.++.....
T Consensus 146 ~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~dva~~~~~l~~~~~~ 216 (230)
T PRK07041 146 ALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP--A-------RRVGQPEDVANAILFLAANGFT 216 (230)
T ss_pred HHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhcCCCc
Confidence 87743 24778888898776542110 000111111111111 1 1234689999999999987656
Q ss_pred CCceEEecCCccc
Q 022578 209 SRQVFNISGEKYV 221 (295)
Q Consensus 209 ~~~~~~i~~~~~~ 221 (295)
.|+.|++.++..+
T Consensus 217 ~G~~~~v~gg~~~ 229 (230)
T PRK07041 217 TGSTVLVDGGHAI 229 (230)
T ss_pred CCcEEEeCCCeec
Confidence 6889999887643
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.4e-15 Score=123.56 Aligned_cols=182 Identities=19% Similarity=0.242 Sum_probs=123.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||..+++.|+++|++|++++|++...... ...+.....++.++.+|++|.+.+..+++.. ++|+
T Consensus 7 tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 7 TGASEGIGRALAVRLARAGAQLVLAARNETRLASL-----AQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986542211 0111222346889999999999988887643 6899
Q ss_pred EEEcccCC---------------------hhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE---------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..++.++++++ . +..++|++||...+.... ....|.
T Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~ 151 (263)
T PRK06181 82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP----------TRSGYA 151 (263)
T ss_pred EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC----------CccHHH
Confidence 99998752 12234445553 2 457899999987654211 112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..+++++.++||.+..+..... .. ..+.+.. ..+.....+++++|+|++++.+
T Consensus 152 ~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~-----~~--~~~~~~~--~~~~~~~~~~~~~dva~~i~~~ 222 (263)
T PRK06181 152 ASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA-----LD--GDGKPLG--KSPMQESKIMSAEECAEAILPA 222 (263)
T ss_pred HHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh-----cc--ccccccc--cccccccCCCCHHHHHHHHHHH
Confidence 89998887753 3589999999999887632110 00 0122111 1112223679999999999999
Q ss_pred hcCC
Q 022578 203 LGNE 206 (295)
Q Consensus 203 ~~~~ 206 (295)
+...
T Consensus 223 ~~~~ 226 (263)
T PRK06181 223 IARR 226 (263)
T ss_pred hhCC
Confidence 9753
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.9e-15 Score=139.83 Aligned_cols=203 Identities=15% Similarity=0.114 Sum_probs=136.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||..+++.|+++|++|++++|+++....... .+... .++.++.+|+++.+++..++++. ++|+
T Consensus 428 TGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~-----~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv 501 (681)
T PRK08324 428 TGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA-----ELGGP-DRALGVACDVTDEAAVQAAFEEAALAFGGVDI 501 (681)
T ss_pred ecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-----HHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998765321110 01111 36889999999999988877642 7999
Q ss_pred EEEcccC--------------------ChhcHHHHHHhC----C--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR--------------------EADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||++|. |..+..++++++ + + ..+||++||...+.... ....|
T Consensus 502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~----------~~~~Y 571 (681)
T PRK08324 502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP----------NFGAY 571 (681)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC----------CcHHH
Confidence 9999985 223344554443 3 3 36899999976542211 11235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeee-cCCCCCchHHHHHHHHHcCCCc----ccCCCCCceeeeeeHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPI----PIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~D~a 196 (295)
..+|...+.+++ ..++++++++|+.+| +......... .......+... ..+..+.....+++++|+|
T Consensus 572 ~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA 650 (681)
T PRK08324 572 GAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWI-EARAAAYGLSEEELEEFYRARNLLKREVTPEDVA 650 (681)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhh-hhhhhhccCChHHHHHHHHhcCCcCCccCHHHHH
Confidence 589999988764 246999999999998 5543221110 00111111111 1223455567789999999
Q ss_pred HHHHHHhc--CCCCCCceEEecCCcc
Q 022578 197 RAFVQVLG--NEKASRQVFNISGEKY 220 (295)
Q Consensus 197 ~~i~~~~~--~~~~~~~~~~i~~~~~ 220 (295)
++++.++. .....|..+++.++..
T Consensus 651 ~a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 651 EAVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred HHHHHHhCccccCCcCCEEEECCCch
Confidence 99999984 3445688999998864
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-14 Score=118.14 Aligned_cols=195 Identities=17% Similarity=0.187 Sum_probs=127.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.+......... ...+.....++.++.+|+++++++.+++++ ..+|+
T Consensus 12 tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (247)
T PRK12935 12 TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENL----VNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI 87 (247)
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHH----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999987655432211110 011112224688999999999999888874 25899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..++.++++++. +..++|++||...+.+.. ....|.
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~ 157 (247)
T PRK12935 88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF----------GQTNYS 157 (247)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC----------CCcchH
Confidence 99999862 223444444432 456899999865432211 112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..++++++++||.+.++.... ...........+ .....+++++|++++++.+
T Consensus 158 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~ 227 (247)
T PRK12935 158 AAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQKIVAK---------IPKKRFGQADEIAKGVVYL 227 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHH
Confidence 88998776652 248999999999988763211 111111111111 1223568999999999998
Q ss_pred hcCCC-CCCceEEecCCc
Q 022578 203 LGNEK-ASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~~-~~~~~~~i~~~~ 219 (295)
+.... ..|+.|++.++.
T Consensus 228 ~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 228 CRDGAYITGQQLNINGGL 245 (247)
T ss_pred cCcccCccCCEEEeCCCc
Confidence 86543 357899998874
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3e-14 Score=117.82 Aligned_cols=195 Identities=19% Similarity=0.240 Sum_probs=122.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||+|+||..++++|+++|++|+++ .|+++...... ..+.....++.++.+|+.|++++.++++. ..+|
T Consensus 7 tGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 7 TGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVV-----NLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 7999999999999999999999875 45443311110 01122224578899999999999888774 2579
Q ss_pred EEEEcccCCh---------------------hcHHHHHHh----CC-----CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 75 VVYDINGREA---------------------DEVEPILDA----LP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 75 ~vi~~a~~~~---------------------~~~~~ll~~----~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
+|||+++... .++..++++ +. ...+||++||...+..... .
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~---------~ 152 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG---------E 152 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC---------c
Confidence 9999998621 112122222 11 2356999999765422110 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
...|..+|...+.+++ ..+++++++|||.+|+|..................+.. ...+++|+|+
T Consensus 153 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~ 223 (247)
T PRK09730 153 YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------RGGQPEEVAQ 223 (247)
T ss_pred ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence 1235588988887653 35899999999999998542211122222222222211 1136899999
Q ss_pred HHHHHhcCCC--CCCceEEecCC
Q 022578 198 AFVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~ 218 (295)
+++.++.... ..|..+.+.++
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 224 AIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred HHHhhcChhhcCccCcEEecCCC
Confidence 9999887532 35667777654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.8e-14 Score=116.60 Aligned_cols=193 Identities=20% Similarity=0.249 Sum_probs=125.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
||++|+||.+++++|+++|++|++++|+........ ...+.....++.++.+|++|.+++.+++.+ ..+|+
T Consensus 4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEV----VEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999999999998763211100 111122234588999999999998888763 25799
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------CCCcEEEeeccc-cccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||++|.. ..++.++++++. +.++||++||.. +++.. ....|
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-----------~~~~y 148 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA-----------GQANY 148 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-----------CCchh
Confidence 99999863 123444555542 456999999964 44321 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+.+ ..++.+++++||.+.++.... ....+........+. ..+.+++|++++++.
T Consensus 149 ~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~ 218 (239)
T TIGR01830 149 AASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK-LSEKVKKKILSQIPL---------GRFGTPEEVANAVAF 218 (239)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh-cChHHHHHHHhcCCc---------CCCcCHHHHHHHHHH
Confidence 578887766542 358999999999886653211 111122222222111 124578999999998
Q ss_pred HhcCC--CCCCceEEecCC
Q 022578 202 VLGNE--KASRQVFNISGE 218 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~ 218 (295)
++..+ ...|+.|++.++
T Consensus 219 ~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 219 LASDEASYITGQVIHVDGG 237 (239)
T ss_pred HhCcccCCcCCCEEEeCCC
Confidence 88553 346788998664
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.8e-14 Score=117.08 Aligned_cols=195 Identities=21% Similarity=0.262 Sum_probs=126.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||+++++.|+++|++|+++.|+........ ...+.....++.++.+|+++.+++.+++++ .++|+
T Consensus 11 tG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 86 (245)
T PRK12937 11 TGASRGIGAAIARRLAADGFAVAVNYAGSAAAADEL----VAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV 86 (245)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHH----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999988877654311110 111222235688999999999999888874 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
|||++|.. ..++.++++++. ...++|++||...+...+ ....|..+
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~Y~~s 156 (245)
T PRK12937 87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP----------GYGPYAAS 156 (245)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC----------CCchhHHH
Confidence 99999852 223334444432 335899999876532211 11235589
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|...+.+++ ..++++++++||.+-.+.............+....+. ..+.+++|+++++..++.
T Consensus 157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~~ 227 (245)
T PRK12937 157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPL---------ERLGTPEEIAAAVAFLAG 227 (245)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcC
Confidence 999887763 2478999999998876632111111122222222221 123468999999999887
Q ss_pred CCC--CCCceEEecCC
Q 022578 205 NEK--ASRQVFNISGE 218 (295)
Q Consensus 205 ~~~--~~~~~~~i~~~ 218 (295)
++. ..|+.+++.++
T Consensus 228 ~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 228 PDGAWVNGQVLRVNGG 243 (245)
T ss_pred ccccCccccEEEeCCC
Confidence 542 35778888764
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.5e-14 Score=118.40 Aligned_cols=197 Identities=16% Similarity=0.215 Sum_probs=129.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+..+..... ..+.....++.++.+|++|++++.+++++ ..+|+
T Consensus 18 tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~ 92 (259)
T PRK08213 18 TGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAA-----AHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI 92 (259)
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999999999999865422111 01112224678899999999999776653 26899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC-------CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR--------------------EADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||++|. |..++.++++++. +..+||++||...+.+.... ......|
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~------~~~~~~Y 166 (259)
T PRK08213 93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE------VMDTIAY 166 (259)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc------ccCcchH
Confidence 9999985 2223455555432 45699999997665332110 0111234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|+..|.+++ ..++++.+++|+.+-.+.... ....+......+.++.. +...+|+++++..
T Consensus 167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~va~~~~~ 236 (259)
T PRK08213 167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG-TLERLGEDLLAHTPLGR---------LGDDEDLKGAALL 236 (259)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh-hhHHHHHHHHhcCCCCC---------CcCHHHHHHHHHH
Confidence 589999888764 247999999999887664221 22333333333333222 2348999999888
Q ss_pred HhcCC--CCCCceEEecCC
Q 022578 202 VLGNE--KASRQVFNISGE 218 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~ 218 (295)
++... ...|..+++.++
T Consensus 237 l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 237 LASDASKHITGQILAVDGG 255 (259)
T ss_pred HhCccccCccCCEEEECCC
Confidence 88653 235777877765
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.5e-14 Score=117.63 Aligned_cols=190 Identities=20% Similarity=0.245 Sum_probs=124.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+....... ..+...++.++.+|++|.+++..+++. .++|+
T Consensus 12 tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 12 TGGTSGIGLETARQFLAEGARVAITGRDPASLEAA--------RAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHH--------HHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999875442111 011124678899999998877665543 26899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC----CCCcEEEeeccc-cccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGR--------------------EADEVEPILDALP----NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~----~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
|||++|. |..++.++++++. ...++|++||.. .|+.. ....|..
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~-----------~~~~Y~~ 152 (249)
T PRK06500 84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP-----------NSSVYAA 152 (249)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC-----------CccHHHH
Confidence 9999985 2233555666653 335777777744 33211 1123558
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
+|+..|.+++ ..+++++++|||.+++|... ......+.+.+....++. -+..++|+|++
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~~ 223 (249)
T PRK06500 153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFGTPEEIAKA 223 (249)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence 9999888773 24899999999999987321 111122223333332221 13478999999
Q ss_pred HHHHhcCCC--CCCceEEecCC
Q 022578 199 FVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~ 218 (295)
+..++.++. ..|..+.+.++
T Consensus 224 ~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 224 VLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred HHHHcCccccCccCCeEEECCC
Confidence 999887532 34666666665
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=5e-14 Score=117.21 Aligned_cols=192 Identities=16% Similarity=0.131 Sum_probs=126.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+..+.... ......++.++.+|+++.+++.+++++. .+|+
T Consensus 16 tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 16 TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKV--------AKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH--------HHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999998876542111 0111246889999999998887665532 5899
Q ss_pred EEEcccCC----------------------hhcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE----------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~----------------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|.. ..++.++++++. ...++|++||...+.... ....|
T Consensus 88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~----------~~~~Y 157 (255)
T PRK05717 88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP----------DTEAY 157 (255)
T ss_pred EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC----------CCcch
Confidence 99999862 123555666653 346899999876542211 12235
Q ss_pred chhhHHHHHHhh----h--cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 129 ~~~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
..+|+..+.+.+ + .++++..++||.+.++.........+.... ... .+. ..+.+++|+|.++..+
T Consensus 158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~-~~~---~~~-----~~~~~~~~va~~~~~l 228 (255)
T PRK05717 158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEAD-HAQ---HPA-----GRVGTVEDVAAMVAWL 228 (255)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHH-hhc---CCC-----CCCcCHHHHHHHHHHH
Confidence 699999887764 2 258999999999998743211111111110 111 111 1356899999999988
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+... ...|+.+.+.++.
T Consensus 229 ~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 229 LSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred cCchhcCccCcEEEECCCc
Confidence 8653 2357778776653
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.9e-14 Score=118.04 Aligned_cols=200 Identities=19% Similarity=0.218 Sum_probs=130.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+++.. +. ...+.+...++.++.+|+++++++..++++ ..+|+
T Consensus 13 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (258)
T PRK08628 13 TGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EF-----AEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG 86 (258)
T ss_pred eCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HH-----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999987652 11 112222345789999999999999888864 26899
Q ss_pred EEEcccCCh-------------------hcHHHHHHh----CC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGREA-------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~~-------------------~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
|||++|... .+..+++++ ++ +..+||++||...+.... ....|..+
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~Y~~s 156 (258)
T PRK08628 87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG----------GTSGYAAA 156 (258)
T ss_pred EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC----------CCchhHHH
Confidence 999998521 122233333 33 446899999976542211 11234599
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-----HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|+..+.+++ ..+++++.++||.++++...... .......+... .+. + ..++.++|+|+++
T Consensus 157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~-~-----~~~~~~~dva~~~ 228 (258)
T PRK08628 157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK--IPL-G-----HRMTTAEEIADTA 228 (258)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc--CCc-c-----ccCCCHHHHHHHH
Confidence 999888764 35899999999999997421100 00000111110 110 1 1357899999999
Q ss_pred HHHhcCC--CCCCceEEecCCcccCHHH
Q 022578 200 VQVLGNE--KASRQVFNISGEKYVTFDG 225 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~~~t~~e 225 (295)
+.++... ...|..+.+.++. ..+++
T Consensus 229 ~~l~~~~~~~~~g~~~~~~gg~-~~~~~ 255 (258)
T PRK08628 229 VFLLSERSSHTTGQWLFVDGGY-VHLDR 255 (258)
T ss_pred HHHhChhhccccCceEEecCCc-ccccc
Confidence 9998764 3456778776653 44443
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.8e-15 Score=123.42 Aligned_cols=202 Identities=16% Similarity=0.099 Sum_probs=127.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.....+... .+ ....++.++.+|++|.+++.++++. .++|+
T Consensus 24 tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~ 97 (280)
T PLN02253 24 TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD-----SL-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI 97 (280)
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----Hh-cCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 7999999999999999999999999987654211110 00 1124688999999999998887764 26999
Q ss_pred EEEcccCC----------------------hhcHHHHHHhCC------CCCcEEEeecccc-ccCCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE----------------------ADEVEPILDALP------NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 76 vi~~a~~~----------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~p~ 126 (295)
+||++|.. ..++.++++++. +..++|++||... ++. ..+.
T Consensus 98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~~ 166 (280)
T PLN02253 98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-----------LGPH 166 (280)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-----------CCCc
Confidence 99999852 112334444432 3458899988654 221 1123
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-----HHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
.|..+|...|.+.+ ..++++..++||.+.++...... ....+..... ............++++|
T Consensus 167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~d 242 (280)
T PLN02253 167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA----FAGKNANLKGVELTVDD 242 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHH----HhhcCCCCcCCCCCHHH
Confidence 46699999988764 24799999999999876321100 0001100000 00000000012367999
Q ss_pred HHHHHHHHhcCCC--CCCceEEecCCcccCH
Q 022578 195 LARAFVQVLGNEK--ASRQVFNISGEKYVTF 223 (295)
Q Consensus 195 ~a~~i~~~~~~~~--~~~~~~~i~~~~~~t~ 223 (295)
+|++++.++.... ..|..+++.++...+.
T Consensus 243 va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~ 273 (280)
T PLN02253 243 VANAVLFLASDEARYISGLNLMIDGGFTCTN 273 (280)
T ss_pred HHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence 9999999987532 3577888888754443
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.7e-14 Score=120.29 Aligned_cols=136 Identities=14% Similarity=0.184 Sum_probs=102.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC------CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~------~~d 74 (295)
|||+|+||.+++++|.++|++|++++|+++..... . ..+++++.+|++|.+++..++++. .+|
T Consensus 10 tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l---------~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 10 TGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL---------E--AEGLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------H--HCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 79999999999999999999999999987653211 1 136889999999999888777642 689
Q ss_pred EEEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+|||++|.. ..+ ++.+++.+. +..++|++||...+... .....|
T Consensus 79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y 148 (277)
T PRK05993 79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPM----------KYRGAY 148 (277)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCC----------CccchH
Confidence 999998752 112 556777765 66799999997654211 111235
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecC
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~ 157 (295)
..+|+..|.+. +..|+++++++||.+-.+
T Consensus 149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 59999998875 346899999999988776
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.5e-14 Score=118.49 Aligned_cols=196 Identities=20% Similarity=0.237 Sum_probs=127.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||+|+||.+++++|+++|++|++..|+..... ..+ ...+.....++.++.+|++|.+++.+++++ .++|
T Consensus 55 TGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 130 (294)
T PRK07985 55 TGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDV----KKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD 130 (294)
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHH----HHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999998876543211 000 001112224577899999999888777654 2689
Q ss_pred EEEEcccCC---------------------hhcHHHHHHhC----CCCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 75 VVYDINGRE---------------------ADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 75 ~vi~~a~~~---------------------~~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
++||++|.. ..++..+++++ +...++|++||...+..... ...|.
T Consensus 131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~----------~~~Y~ 200 (294)
T PRK07985 131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH----------LLDYA 200 (294)
T ss_pred EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC----------cchhH
Confidence 999998851 22344444443 23368999999887643211 12355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|+..+.+.+ ..|+++..++||.++++.... ..............+ ...+..++|+|++++.
T Consensus 201 asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~r~~~pedva~~~~f 271 (294)
T PRK07985 201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP---------MKRAGQPAELAPVYVY 271 (294)
T ss_pred HHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCC---------CCCCCCHHHHHHHHHh
Confidence 89998887653 358999999999999985311 111111122211111 1124568999999999
Q ss_pred HhcCCC--CCCceEEecCCc
Q 022578 202 VLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~~ 219 (295)
++.... ..|..+.+.++.
T Consensus 272 L~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 272 LASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred hhChhcCCccccEEeeCCCe
Confidence 987532 357788888764
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=114.63 Aligned_cols=198 Identities=13% Similarity=0.155 Sum_probs=126.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.+...... ...+.....++.++.+|++|++++.+++++ ..+|+
T Consensus 14 tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 89 (254)
T PRK06114 14 TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAET----AEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL 89 (254)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998764311110 111222234678899999999988887764 25799
Q ss_pred EEEcccCC--------------------hhcHHHH----HHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~l----l~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.. ..++..+ +..+. +..++|++||...+..... .....|.
T Consensus 90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------~~~~~Y~ 161 (254)
T PRK06114 90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG--------LLQAHYN 161 (254)
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------CCcchHH
Confidence 99999862 2233333 33333 4568999998764322111 0012355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|+++.+++||.+.++..................+. ..+..++|++++++.+
T Consensus 162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~l 232 (254)
T PRK06114 162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM---------QRMAKVDEMVGPAVFL 232 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence 89998777653 3589999999999988743211111111111111111 1235689999999999
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+.+. ...|+.+.+.++.
T Consensus 233 ~s~~~~~~tG~~i~~dgg~ 251 (254)
T PRK06114 233 LSDAASFCTGVDLLVDGGF 251 (254)
T ss_pred cCccccCcCCceEEECcCE
Confidence 8753 2367788887763
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=114.94 Aligned_cols=193 Identities=16% Similarity=0.165 Sum_probs=127.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+..... ... .....++.++.+|+++++++..++++. ++|+
T Consensus 21 tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~-------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 21 TGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAA-------QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-------HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999999999999765311 000 001135678999999999888877642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..+..++++++. +..++|++||.....+.. ....|.
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~ 162 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE----------RHVAYC 162 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC----------CCchHH
Confidence 99999862 223444555432 457999999976432111 112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..++++..++||.+..+................. .+ ...+.+++|+|++++.+
T Consensus 163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va~~~~~l 233 (255)
T PRK06841 163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKL--IP-------AGRFAYPEEIAAAALFL 233 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhc--CC-------CCCCcCHHHHHHHHHHH
Confidence 88988877653 3589999999999987743211101111111111 11 12457899999999999
Q ss_pred hcCCC--CCCceEEecCCcc
Q 022578 203 LGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~~ 220 (295)
+..+. ..|+.+.+.++..
T Consensus 234 ~~~~~~~~~G~~i~~dgg~~ 253 (255)
T PRK06841 234 ASDAAAMITGENLVIDGGYT 253 (255)
T ss_pred cCccccCccCCEEEECCCcc
Confidence 87642 3678888877653
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-13 Score=114.85 Aligned_cols=192 Identities=17% Similarity=0.170 Sum_probs=126.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||++++++|.++|++|++++|+.... . ..++.++.+|++|++++..++++ ..+|+
T Consensus 15 tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 80 (260)
T PRK06523 15 TGGTKGIGAATVARLLEAGARVVTTARSRPDD---L-----------PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI 80 (260)
T ss_pred ECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---c-----------CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986541 1 14588999999999888766543 26899
Q ss_pred EEEcccCC----------------------hhcHHH----HHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE----------------------ADEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~----------------------~~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|||++|.. ..+..+ ++..++ +..++|++||...+.... .....
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------~~~~~ 151 (260)
T PRK06523 81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP---------ESTTA 151 (260)
T ss_pred EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC---------CCcch
Confidence 99999841 112222 334343 456899999976542210 01123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchH----------HHHHHHHHcC-CCcccCCCCCceeee
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----------EWFFHRLKAG-RPIPIPGSGIQVTQL 189 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~ 189 (295)
|..+|...+.+.+ ..++++.+++||.+.++....... ......+.+. ..++ ...+
T Consensus 152 Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~ 224 (260)
T PRK06523 152 YAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP-------LGRP 224 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc-------cCCC
Confidence 5589998887753 358999999999999874211000 0000000000 0011 1124
Q ss_pred eeHHHHHHHHHHHhcCC--CCCCceEEecCCcccC
Q 022578 190 GHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 190 i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
..++|+|+++..++.+. ...|+.+.+.++...|
T Consensus 225 ~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 225 AEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred CCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 56899999999998753 3467889998876544
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.7e-14 Score=115.45 Aligned_cols=196 Identities=14% Similarity=0.139 Sum_probs=130.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+....... ..++.....++.++.+|+++.+++.++++. .++|+
T Consensus 17 tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~ 91 (255)
T PRK06113 17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHV-----VDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI 91 (255)
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 69999999999999999999999999876542211 011111224678899999999988877653 26899
Q ss_pred EEEcccC-------------------ChhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGR-------------------EADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~-------------------~~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+++. |..++.++++++. +..++|++||.....+. .....|..
T Consensus 92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y~~ 161 (255)
T PRK06113 92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------INMTSYAS 161 (255)
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCcchhHH
Confidence 9999985 1223444555542 34599999997643111 11223558
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|...+.+++ ..+++++++.||.+..+.........+.....+..+. ..+..++|++++++.++
T Consensus 162 sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~ 232 (255)
T PRK06113 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFLC 232 (255)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHc
Confidence 9999888773 3578999999999887643221112222222222111 12457899999999998
Q ss_pred cCCC--CCCceEEecCCcc
Q 022578 204 GNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 204 ~~~~--~~~~~~~i~~~~~ 220 (295)
.... ..|+.+++.++..
T Consensus 233 ~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 233 SPAASWVSGQILTVSGGGV 251 (255)
T ss_pred CccccCccCCEEEECCCcc
Confidence 7532 3578898888753
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.7e-13 Score=117.51 Aligned_cols=192 Identities=19% Similarity=0.086 Sum_probs=119.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|++++..+.. ....++.++.+|++|.+++.+++++ .++|+
T Consensus 32 TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~---------~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 32 TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREAL---------AGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 799999999999999999999999999876532111 1113488999999999998887753 36899
Q ss_pred EEEcccCC------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCC-CCCCCCCCCCCCCc-cc
Q 022578 76 VYDINGRE------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKS-RH 129 (295)
Q Consensus 76 vi~~a~~~------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~p~~-~~ 129 (295)
|||+||.. ..+ ++.++..+. +..++|++||........ ........+..+.. |.
T Consensus 103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~ 182 (315)
T PRK06196 103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYG 182 (315)
T ss_pred EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHH
Confidence 99999852 112 344444444 457999999975432110 00001111222223 44
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHH-HHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|...+.+.+ ..|+++++++||.+.++............ ........++ . ..+..++|+|..++.
T Consensus 183 ~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~a~~~~~ 256 (315)
T PRK06196 183 QSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPI-D-----PGFKTPAQGAATQVW 256 (315)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhh-h-----hhcCCHhHHHHHHHH
Confidence 89998877652 35899999999999998532111000000 0000000000 0 023568999999999
Q ss_pred HhcCCC
Q 022578 202 VLGNEK 207 (295)
Q Consensus 202 ~~~~~~ 207 (295)
++..+.
T Consensus 257 l~~~~~ 262 (315)
T PRK06196 257 AATSPQ 262 (315)
T ss_pred HhcCCc
Confidence 986543
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.6e-14 Score=118.45 Aligned_cols=180 Identities=16% Similarity=0.098 Sum_probs=118.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|++|.++++.|+++|++|++++|+++...... .....++.++.+|+++.+++.++++.. ++|+
T Consensus 6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELK--------DELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876522110 111246889999999999988877642 7999
Q ss_pred EEEcccCCh---------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGREA---------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~~---------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||++|... .+ ++.++.++. +..++|++||...+... .....|
T Consensus 78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y 147 (248)
T PRK10538 78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY----------AGGNVY 147 (248)
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCC----------CCCchh
Confidence 999997521 12 344455554 56799999997653211 111234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+.+ ..++.+++++||.+.++.........-.... .. .+ . ...++.++|+|++++.
T Consensus 148 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~--~~---~~-~---~~~~~~~~dvA~~~~~ 218 (248)
T PRK10538 148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA--EK---TY-Q---NTVALTPEDVSEAVWW 218 (248)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHH--Hh---hc-c---ccCCCCHHHHHHHHHH
Confidence 589998887753 3579999999999986532100000000000 00 00 1 1134689999999999
Q ss_pred HhcCCC
Q 022578 202 VLGNEK 207 (295)
Q Consensus 202 ~~~~~~ 207 (295)
++..+.
T Consensus 219 l~~~~~ 224 (248)
T PRK10538 219 VATLPA 224 (248)
T ss_pred HhcCCC
Confidence 987653
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=115.05 Aligned_cols=198 Identities=16% Similarity=0.155 Sum_probs=128.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.+......... ...+.....++.++.+|++|.+++..++++ ..+|+
T Consensus 15 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~ 90 (258)
T PRK09134 15 TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEAL----AAEIRALGRRAVALQADLADEAEVRALVARASAALGPITL 90 (258)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999998877543211100 001111124688999999999998888764 25899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGR--------------------EADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|. |..++.++++++. ...++|++||...+...+ ....|.
T Consensus 91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p----------~~~~Y~ 160 (258)
T PRK09134 91 LVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP----------DFLSYT 160 (258)
T ss_pred EEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC----------CchHHH
Confidence 9999985 2234445555433 345788888765432111 011355
Q ss_pred hhhHHHHHHhhh------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 130 KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 130 ~~k~~~E~~~~~------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
.+|...|.+.+. .+++++.++||.++...... ...+ .......+. + ...+++|+|++++.++
T Consensus 161 ~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~--~~~~-~~~~~~~~~---~------~~~~~~d~a~~~~~~~ 228 (258)
T PRK09134 161 LSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS--PEDF-ARQHAATPL---G------RGSTPEEIAAAVRYLL 228 (258)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC--hHHH-HHHHhcCCC---C------CCcCHHHHHHHHHHHh
Confidence 999888876632 24889999999887653211 1111 122122111 1 1366999999999999
Q ss_pred cCCCCCCceEEecCCcccCHH
Q 022578 204 GNEKASRQVFNISGEKYVTFD 224 (295)
Q Consensus 204 ~~~~~~~~~~~i~~~~~~t~~ 224 (295)
..+...|+.|.+.++..++|.
T Consensus 229 ~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 229 DAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred cCCCcCCCEEEECCCeecccc
Confidence 877667889999888765554
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-14 Score=119.45 Aligned_cols=188 Identities=14% Similarity=0.047 Sum_probs=118.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|+||++++++|+++|++|++++|++....... ........++.++.+|++|++++..++. .++|+|||++
T Consensus 8 tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi~~a 81 (257)
T PRK09291 8 TGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALR-----AEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVLLNNA 81 (257)
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEEEECC
Confidence 799999999999999999999999999865421110 0011112468899999999999988875 4899999999
Q ss_pred cCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHH
Q 022578 81 GRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN 134 (295)
Q Consensus 81 ~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~ 134 (295)
+.. ..+ ++.++..+. +.+++|++||...+... .....|..+|..
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~----------~~~~~Y~~sK~a 151 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG----------PFTGAYCASKHA 151 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC----------CCcchhHHHHHH
Confidence 852 112 223344443 56799999987543211 111235589998
Q ss_pred HHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 135 TESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 135 ~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
.|.+. +..|++++++|||.+..+.... ....+........ .+.. .+.....+.++.+|+++.++.++..+
T Consensus 152 ~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (257)
T PRK09291 152 LEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT-MAETPKRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAMVEVIPAD 229 (257)
T ss_pred HHHHHHHHHHHHHhcCcEEEEEecCcccccchhh-hhhhhhhhcchhhHHHhh-hhhhccccCCCHHHHHHHHHHHhcCC
Confidence 88764 2468999999999875542111 0000000000000 0111 11223345578999999999888754
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.9e-14 Score=114.88 Aligned_cols=192 Identities=16% Similarity=0.168 Sum_probs=126.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+..... ...+.....++.++.+|+++.+++..++++ .++|+
T Consensus 11 tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 11 TGANTGLGQGIAVGLAEAGADIVGAGRSEPSET-------QQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHH-------HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998652210 111122234688999999999999877764 26999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|.. ..+..++++++ . + ..++|++||...+..... ...|
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------~~~Y 153 (248)
T TIGR01832 84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR----------VPSY 153 (248)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC----------Cchh
Confidence 99999862 11233344443 2 2 468999999877643211 1235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|+..+.+.+ ..+++++.++||.+..+...... ........... . + ...++.++|+|++++
T Consensus 154 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~--~-----~~~~~~~~dva~~~~ 224 (248)
T TIGR01832 154 TASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER--I--P-----AGRWGTPDDIGGPAV 224 (248)
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc--C--C-----CCCCcCHHHHHHHHH
Confidence 589998887763 24899999999999887421100 00011111111 1 1 135688999999999
Q ss_pred HHhcCCC--CCCceEEecCC
Q 022578 201 QVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~ 218 (295)
.++.... ..|..+.+.++
T Consensus 225 ~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 225 FLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred HHcCccccCcCCcEEEeCCC
Confidence 9987532 34666666655
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-13 Score=114.77 Aligned_cols=193 Identities=15% Similarity=0.209 Sum_probs=129.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||..+++.|+++|++|++++|++.+..... .++.....++.++.+|+++.+++.++++.. .+|+
T Consensus 11 tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (253)
T PRK08217 11 TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAV-----AECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG 85 (253)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999999875422111 111122346788999999998887777642 5899
Q ss_pred EEEcccCCh-----------------------------hcHH----HHHHhCC---CCCcEEEeeccccccCCCCCCCCC
Q 022578 76 VYDINGREA-----------------------------DEVE----PILDALP---NLEQFIYCSSAGVYLKSDLLPHCE 119 (295)
Q Consensus 76 vi~~a~~~~-----------------------------~~~~----~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e 119 (295)
|||++|... .+.. .++..+. ...++|++||...|+...
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~------ 159 (253)
T PRK08217 86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG------ 159 (253)
T ss_pred EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCC------
Confidence 999998421 0111 1222221 234799999887664321
Q ss_pred CCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 022578 120 TDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 120 ~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (295)
...|..+|+..+.+++ ..+++++.++||.+.++.... ..+..........+. ..+.++
T Consensus 160 -----~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~ 224 (253)
T PRK08217 160 -----QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEKMIPV---------GRLGEP 224 (253)
T ss_pred -----CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-cCHHHHHHHHhcCCc---------CCCcCH
Confidence 2235589998887653 358999999999998875422 112222322222221 124578
Q ss_pred HHHHHHHHHHhcCCCCCCceEEecCCc
Q 022578 193 KDLARAFVQVLGNEKASRQVFNISGEK 219 (295)
Q Consensus 193 ~D~a~~i~~~~~~~~~~~~~~~i~~~~ 219 (295)
+|+|+++..++......|+.|+++++.
T Consensus 225 ~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 225 EEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred HHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 999999999997655578899998864
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.6e-14 Score=118.10 Aligned_cols=169 Identities=18% Similarity=0.139 Sum_probs=115.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||..++++|+++|++|++++|+++..... .....++.++.+|++|++++.++++. .++|+
T Consensus 11 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 11 TGGARGIGLATARALAALGARVAIGDLDEALAKET---------AAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 11112578899999999988776654 26899
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.. ..++ +.++..+. +..++|++||...+.... ....|.
T Consensus 82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 151 (273)
T PRK07825 82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVP----------GMATYC 151 (273)
T ss_pred EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCC----------CCcchH
Confidence 99999862 1122 22334443 667999999987543211 112355
Q ss_pred hhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+. +..|+++++++||.+..+... +.. ......+++++|+|++++.+
T Consensus 152 asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------------~~~------~~~~~~~~~~~~va~~~~~~ 212 (273)
T PRK07825 152 ASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA-------------GTG------GAKGFKNVEPEDVAAAIVGT 212 (273)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc-------------ccc------cccCCCCCCHHHHHHHHHHH
Confidence 8888766543 456899999999987654210 100 01122468899999999999
Q ss_pred hcCCC
Q 022578 203 LGNEK 207 (295)
Q Consensus 203 ~~~~~ 207 (295)
+.++.
T Consensus 213 l~~~~ 217 (273)
T PRK07825 213 VAKPR 217 (273)
T ss_pred HhCCC
Confidence 98754
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=3e-13 Score=112.72 Aligned_cols=187 Identities=15% Similarity=0.158 Sum_probs=124.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.... .++.++.+|++|++++.++++.. .+|+
T Consensus 12 tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~ 75 (258)
T PRK06398 12 TGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI 75 (258)
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999886541 35889999999999888877642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.. ..++..++++ +. +..++|++||...+.... ....|.
T Consensus 76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 145 (258)
T PRK06398 76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR----------NAAAYV 145 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC----------CCchhh
Confidence 99999852 2233344444 32 557999999987653211 122355
Q ss_pred hhhHHHHHHhhh------cCCcEEEeccCeeecCCCCCc-------hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 130 KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 130 ~~k~~~E~~~~~------~~~~~~i~R~~~i~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
.+|+..+.+.+. .++++..++||.+-.+..... ....+...... ++.......+..++|+|
T Consensus 146 ~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~eva 219 (258)
T PRK06398 146 TSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKRVGKPEEVA 219 (258)
T ss_pred hhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCCCcCHHHHH
Confidence 899998887642 248899999998876521100 00000000000 00001112346799999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++++.++... ...|..+.+.++.
T Consensus 220 ~~~~~l~s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 220 YVVAFLASDLASFITGECVTVDGGL 244 (258)
T ss_pred HHHHHHcCcccCCCCCcEEEECCcc
Confidence 9999998753 2367778777764
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1e-13 Score=114.55 Aligned_cols=197 Identities=17% Similarity=0.198 Sum_probs=128.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.++++.|+++|++|+++.|++........ ........++.++.+|+.+.+++.++++. ..+|+
T Consensus 8 tG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~ 83 (245)
T PRK12824 8 TGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWF----EEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI 83 (245)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHH----HHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6999999999999999999999999998542110000 00011124588999999999988887764 25899
Q ss_pred EEEcccCC--------------------hhcHHH----HHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.. ..+..+ +++.++ +..+||++||...+..... ...|.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~----------~~~Y~ 153 (245)
T PRK12824 84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG----------QTNYS 153 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC----------ChHHH
Confidence 99999852 122333 344444 5679999999776532211 12344
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+++ ..++++++++||.+.++..... ............+. ..+..++|+++++..+
T Consensus 154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l 223 (245)
T PRK12824 154 AAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM-GPEVLQSIVNQIPM---------KRLGTPEEIAAAVAFL 223 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc-CHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence 88887776653 4589999999999988743211 11122222222211 1234689999999988
Q ss_pred hcCC--CCCCceEEecCCccc
Q 022578 203 LGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~~ 221 (295)
+... ...|+.++++++..+
T Consensus 224 ~~~~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK12824 224 VSEAAGFITGETISINGGLYM 244 (245)
T ss_pred cCccccCccCcEEEECCCeec
Confidence 8653 236889999887643
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.4e-14 Score=119.22 Aligned_cols=135 Identities=20% Similarity=0.153 Sum_probs=102.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|++..... ..+++++.+|++|++++.++++.. .+|+
T Consensus 10 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 10 TGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence 7999999999999999999999999998765321 146889999999999999888742 5899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.. ..++.+++++ ++ +.+++|++||...+.... ....|.
T Consensus 77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~ 146 (270)
T PRK06179 77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAP----------YMALYA 146 (270)
T ss_pred EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCC----------CccHHH
Confidence 99999862 1233444444 33 678999999976543211 112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCC
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~ 158 (295)
.+|...+.+.+ ..|+++++++||.+.++.
T Consensus 147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~ 182 (270)
T PRK06179 147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF 182 (270)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence 89998887653 469999999999998874
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-13 Score=114.64 Aligned_cols=191 Identities=18% Similarity=0.209 Sum_probs=126.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|+++.|+.......+ .. .++.++.+|++|++++.++++.. ++|+
T Consensus 13 tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l--------~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 13 TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL--------RE--KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH--------Hh--CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999998877654321111 11 25789999999999998887642 6899
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..+ ++.++..++ +..++|++||...++... .....|.
T Consensus 83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~Y~ 153 (255)
T PRK06463 83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA---------EGTTFYA 153 (255)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC---------CCccHhH
Confidence 99999862 112 344455554 557999999987653211 0112245
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC----chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
.+|+..+.+.+ ..+++++.++||.+-.+.... .....+........+ ...+..++|+|++
T Consensus 154 asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~ 224 (255)
T PRK06463 154 ITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV---------LKTTGKPEDIANI 224 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC---------cCCCcCHHHHHHH
Confidence 89998887763 358999999999886653210 000111111111111 1234679999999
Q ss_pred HHHHhcCCC--CCCceEEecCCc
Q 022578 199 FVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
++.++.... ..|..+.+.++.
T Consensus 225 ~~~l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 225 VLFLASDDARYITGQVIVADGGR 247 (255)
T ss_pred HHHHcChhhcCCCCCEEEECCCe
Confidence 999987543 357788887765
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.3e-14 Score=116.39 Aligned_cols=174 Identities=20% Similarity=0.222 Sum_probs=118.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|++|.+++++|+++|++|++++|++.+..... ..+.....++.++.+|+++++++.+++++. ++|+
T Consensus 13 tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (239)
T PRK07666 13 TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVA-----EEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI 87 (239)
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence 699999999999999999999999999876522111 111222346888999999999998888642 7999
Q ss_pred EEEcccCCh--------------------hcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|... .++.++++++ . +.+++|++||...+.... ....|.
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~Y~ 157 (239)
T PRK07666 88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA----------VTSAYS 157 (239)
T ss_pred EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC----------CCcchH
Confidence 999998632 1233344443 2 567899999976543211 112244
Q ss_pred hhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.++ +..+++++++|||.+.++..... +... +. ...++..+|+|++++.+
T Consensus 158 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------~~~~---~~---~~~~~~~~~~a~~~~~~ 220 (239)
T PRK07666 158 ASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------GLTD---GN---PDKVMQPEDLAEFIVAQ 220 (239)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-----------cccc---cC---CCCCCCHHHHHHHHHHH
Confidence 7888776665 24689999999999888732110 0000 11 12357899999999999
Q ss_pred hcCC
Q 022578 203 LGNE 206 (295)
Q Consensus 203 ~~~~ 206 (295)
+..+
T Consensus 221 l~~~ 224 (239)
T PRK07666 221 LKLN 224 (239)
T ss_pred HhCC
Confidence 9865
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.3e-14 Score=116.00 Aligned_cols=204 Identities=13% Similarity=0.110 Sum_probs=124.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.++++.|+++|++|+++.++.......... ....+.....++.++.+|+++++++.++++. ..+|+
T Consensus 14 tGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 92 (257)
T PRK12744 14 AGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEE-TVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDI 92 (257)
T ss_pred ECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHH-HHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCE
Confidence 69999999999999999999988887664331111100 0011112224688899999999999888764 26899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGR--------------------EADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||++|. |..++..+++++. ...++++++|+...... .....|..+
T Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~----------~~~~~Y~~s 162 (257)
T PRK12744 93 AINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT----------PFYSAYAGS 162 (257)
T ss_pred EEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC----------CCcccchhh
Confidence 9999986 2223334444432 23577776443322110 112335599
Q ss_pred hHHHHHHhhh-------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~~~-------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|+..|.+.+. .+++++.++||.+.++............ . ..... .........+.+++|+|+++..++.
T Consensus 163 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~-~-~~~~~--~~~~~~~~~~~~~~dva~~~~~l~~ 238 (257)
T PRK12744 163 KAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVA-Y-HKTAA--ALSPFSKTGLTDIEDIVPFIRFLVT 238 (257)
T ss_pred HHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhh-c-ccccc--cccccccCCCCCHHHHHHHHHHhhc
Confidence 9999888742 3799999999999876321100000000 0 00000 0111111246789999999999998
Q ss_pred CCC-CCCceEEecCCc
Q 022578 205 NEK-ASRQVFNISGEK 219 (295)
Q Consensus 205 ~~~-~~~~~~~i~~~~ 219 (295)
... ..|+.+++.++.
T Consensus 239 ~~~~~~g~~~~~~gg~ 254 (257)
T PRK12744 239 DGWWITGQTILINGGY 254 (257)
T ss_pred ccceeecceEeecCCc
Confidence 532 257888888764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.8e-13 Score=112.73 Aligned_cols=195 Identities=15% Similarity=0.123 Sum_probs=125.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|+++.|+........ ...+.....++.++.+|+++++++..++++ ..+|+
T Consensus 8 tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 83 (256)
T PRK12743 8 TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKET----AEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV 83 (256)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999998876544311111 011122235688999999999888777764 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC-------CCCcEEEeeccccccCCCCCCCCCCCCCCC-Cc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KS 127 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~ 127 (295)
|||++|.. ..+...+++++. ...++|++||..... +..+ ..
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----------~~~~~~~ 152 (256)
T PRK12743 84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT-----------PLPGASA 152 (256)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC-----------CCCCcch
Confidence 99999852 223334444432 235899999865321 1112 23
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|...+.+++ ..+++++.++||.+.++..... ..........+.+ . + .+.+++|+++++.
T Consensus 153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~--~-~------~~~~~~dva~~~~ 222 (256)
T PRK12743 153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVKPDSRPGIP--L-G------RPGDTHEIASLVA 222 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHHHHHHhcCC--C-C------CCCCHHHHHHHHH
Confidence 5589998887753 3579999999999998743211 0111111111111 1 1 2357899999999
Q ss_pred HHhcCCC--CCCceEEecCCcc
Q 022578 201 QVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~~~ 220 (295)
.++.... ..|..+.+.++..
T Consensus 223 ~l~~~~~~~~~G~~~~~dgg~~ 244 (256)
T PRK12743 223 WLCSEGASYTTGQSLIVDGGFM 244 (256)
T ss_pred HHhCccccCcCCcEEEECCCcc
Confidence 9886532 3577888877643
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=112.36 Aligned_cols=184 Identities=18% Similarity=0.195 Sum_probs=121.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|++|..++++|+++|++|++++|++.+..... ..+... .+++++.+|+.+.+++..+++.. .+|+
T Consensus 12 tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (237)
T PRK07326 12 TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAA-----AELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGGLDV 85 (237)
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHH-----HHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999999875522111 011111 46889999999999988877642 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
|||+++.. ..+..++++++ + +.+++|++||...+.... ....|..
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~y~~ 155 (237)
T PRK07326 86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA----------GGAAYNA 155 (237)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC----------CCchHHH
Confidence 99998752 11223344443 3 556899999876532111 1122447
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|+..+.+.+ ..+++++++||+.+.++..... + .. .....+..+|++++++.++
T Consensus 156 sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-------------~----~~--~~~~~~~~~d~a~~~~~~l 216 (237)
T PRK07326 156 SKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-------------P----SE--KDAWKIQPEDIAQLVLDLL 216 (237)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-------------c----ch--hhhccCCHHHHHHHHHHHH
Confidence 8887665543 3689999999999877632110 0 00 0011377999999999998
Q ss_pred cCCC-CCCceEEecCCc
Q 022578 204 GNEK-ASRQVFNISGEK 219 (295)
Q Consensus 204 ~~~~-~~~~~~~i~~~~ 219 (295)
..+. .....+.+..++
T Consensus 217 ~~~~~~~~~~~~~~~~~ 233 (237)
T PRK07326 217 KMPPRTLPSKIEVRPSR 233 (237)
T ss_pred hCCccccccceEEecCC
Confidence 7754 344455554443
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.7e-13 Score=112.30 Aligned_cols=194 Identities=17% Similarity=0.165 Sum_probs=120.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||..+++.|+++|++|+++.++........ ...+.....++.++.+|+++++++..++++. .+|+
T Consensus 8 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 83 (248)
T PRK06947 8 TGASRGIGRATAVLAAARGWSVGINYARDAAAAEET----ADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA 83 (248)
T ss_pred eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999987654432211110 0111222346889999999998888777542 6899
Q ss_pred EEEcccCC---------------------hhcHHHHHHh----CC--C---CCcEEEeeccccc-cCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE---------------------ADEVEPILDA----LP--N---LEQFIYCSSAGVY-LKSDLLPHCETDTVD 124 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~----~~--~---~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~ 124 (295)
|||++|.. ..+...++++ +. + ..++|++||...+ +... .
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------~ 153 (248)
T PRK06947 84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN----------E 153 (248)
T ss_pred EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC----------C
Confidence 99999852 1122333332 21 1 2469999986543 2111 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|...+.+.+ ..+++++++|||.+..+.... .... ..... +...+ . .....++|++
T Consensus 154 ~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~-~~~~~--~~~~~--~-----~~~~~~e~va 223 (248)
T PRK06947 154 YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPG-RAARL--GAQTP--L-----GRAGEADEVA 223 (248)
T ss_pred CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHH-HHHHH--hhcCC--C-----CCCcCHHHHH
Confidence 1236689998886652 347999999999998874311 1111 11111 11111 1 1135689999
Q ss_pred HHHHHHhcCCC--CCCceEEecCC
Q 022578 197 RAFVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 197 ~~i~~~~~~~~--~~~~~~~i~~~ 218 (295)
+.++.++.++. ..|+.+.+.++
T Consensus 224 ~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 224 ETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred HHHHHHcCccccCcCCceEeeCCC
Confidence 99999987643 35667776654
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.9e-14 Score=115.32 Aligned_cols=176 Identities=14% Similarity=0.095 Sum_probs=119.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.+|..++++|+++|++|++++|++++..... ..+.+...++.++.+|+++.+++..+++. .++|+
T Consensus 12 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (241)
T PRK07454 12 TGASSGIGKATALAFAKAGWDLALVARSQDALEALA-----AELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDV 86 (241)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999999876532111 01112224688999999999988887763 25999
Q ss_pred EEEcccCC--------------------hhcHHH----HHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..++.+ ++..+. +..++|++||...++.... ...|.
T Consensus 87 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------~~~Y~ 156 (241)
T PRK07454 87 LINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ----------WGAYC 156 (241)
T ss_pred EEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC----------ccHHH
Confidence 99999852 112223 333333 4578999999887643211 12345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..+++++++|||.+-.+..... .... . .....++..+|+|++++.+
T Consensus 157 ~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~------------~~~~--~--~~~~~~~~~~~va~~~~~l 220 (241)
T PRK07454 157 VSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE------------TVQA--D--FDRSAMLSPEQVAQTILHL 220 (241)
T ss_pred HHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc------------cccc--c--cccccCCCHHHHHHHHHHH
Confidence 88988876653 4589999999999877631100 0000 0 0012347899999999999
Q ss_pred hcCCC
Q 022578 203 LGNEK 207 (295)
Q Consensus 203 ~~~~~ 207 (295)
+.++.
T Consensus 221 ~~~~~ 225 (241)
T PRK07454 221 AQLPP 225 (241)
T ss_pred HcCCc
Confidence 98764
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.8e-14 Score=116.80 Aligned_cols=178 Identities=15% Similarity=0.121 Sum_probs=118.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc------CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d 74 (295)
|||+|+||.++++.|+++|++|++++|++++.... . ..+++.+.+|++|.+++.+++++ ..+|
T Consensus 8 tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~---------~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 8 TGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM---------N--SLGFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH---------H--hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 79999999999999999999999999987652211 1 13578899999999887766643 2579
Q ss_pred EEEEcccCCh--------------------hcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
.+||++|... .++ +.+++++. +.+++|++||...+.... ....|
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~Y 146 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTP----------GRGAY 146 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCC----------CccHH
Confidence 9999988621 111 23456655 667899999864432111 11235
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|...|.+. ...+++++++|||.+..+.. .....+. .......+...+.+++++|+++++.
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~ 217 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT---------DNVNQTQSDKPVENPGIAARFTLGPEAVVPKLR 217 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh---------hcccchhhccchhhhHHHhhcCCCHHHHHHHHH
Confidence 58999888764 34689999999988765421 1111111 1111112223345799999999999
Q ss_pred HHhcCCCC
Q 022578 201 QVLGNEKA 208 (295)
Q Consensus 201 ~~~~~~~~ 208 (295)
.++.++..
T Consensus 218 ~~~~~~~~ 225 (256)
T PRK08017 218 HALESPKP 225 (256)
T ss_pred HHHhCCCC
Confidence 99987654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.5e-13 Score=114.46 Aligned_cols=194 Identities=15% Similarity=0.181 Sum_probs=124.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.|+++...... ..+.....++.++.+|+++.+++.+++++. .+|+
T Consensus 15 tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (258)
T PRK06949 15 TGASSGLGARFAQVLAQAGAKVVLASRRVERLKELR-----AEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI 89 (258)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 699999999999999999999999999876532111 111222346889999999999998887642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------C--------CCcEEEeeccccccCCCCCCCCCCC
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------N--------LEQFIYCSSAGVYLKSDLLPHCETD 121 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~--------~~~~i~~Ss~~v~~~~~~~~~~e~~ 121 (295)
|||+++.. ..+..++++++. . ..++|++||...+....
T Consensus 90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------- 161 (258)
T PRK06949 90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP-------- 161 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC--------
Confidence 99999851 122333333321 1 35899999977643211
Q ss_pred CCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 122 ~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
....|..+|...+.+++ ..++++++++||.++++................ .++ ...+...+|
T Consensus 162 --~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--~~~-------~~~~~~p~~ 230 (258)
T PRK06949 162 --QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVS--MLP-------RKRVGKPED 230 (258)
T ss_pred --CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHh--cCC-------CCCCcCHHH
Confidence 11234588888877663 258999999999999885422111111111111 111 113455899
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCC
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
+++++..++... ...|..+.+.++
T Consensus 231 ~~~~~~~l~~~~~~~~~G~~i~~dgg 256 (258)
T PRK06949 231 LDGLLLLLAADESQFINGAIISADDG 256 (258)
T ss_pred HHHHHHHHhChhhcCCCCcEEEeCCC
Confidence 999999998753 235666666554
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.1e-13 Score=113.22 Aligned_cols=192 Identities=15% Similarity=0.179 Sum_probs=125.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC------CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~------~~d 74 (295)
|||+|+||+++++.|+++|++|+++.++.......+ ......++.++.+|+++++++.+++++. .+|
T Consensus 11 tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 11 TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEAL-------ADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH-------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 799999999999999999999988765433211110 0111246888999999999988888642 299
Q ss_pred EEEEcccCC--------------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCC
Q 022578 75 VVYDINGRE--------------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (295)
Q Consensus 75 ~vi~~a~~~--------------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~ 122 (295)
++||+++.. ..+..++++++ . +..++|++||..... +
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~ 152 (253)
T PRK08642 84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-----------P 152 (253)
T ss_pred EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------C
Confidence 999998741 12234444443 2 456899999864321 1
Q ss_pred CCCC-ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 123 VDPK-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 123 ~~p~-~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
..+. .|..+|...|.+++ ..++++..++||.+..+................. .+. ..+.+++|
T Consensus 153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~ 223 (253)
T PRK08642 153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAAT--TPL-------RKVTTPQE 223 (253)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhc--CCc-------CCCCCHHH
Confidence 1122 35599999998874 2578999999999876532111111222222221 111 23678999
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+|+++..++... ...|..+.+.++.
T Consensus 224 va~~~~~l~~~~~~~~~G~~~~vdgg~ 250 (253)
T PRK08642 224 FADAVLFFASPWARAVTGQNLVVDGGL 250 (253)
T ss_pred HHHHHHHHcCchhcCccCCEEEeCCCe
Confidence 999999999753 3467888887764
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.7e-13 Score=111.74 Aligned_cols=189 Identities=17% Similarity=0.088 Sum_probs=126.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||++++++|+++|++|++++|+.... .. ..+++++.+|+++++++.++++.. .+|+
T Consensus 12 tGas~gIG~~la~~l~~~g~~v~~~~r~~~~~--~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 12 TGGTRGIGAGIARAFLAAGATVVVCGRRAPET--VD-----------GRPAEFHAADVRDPDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCChhhh--hc-----------CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986541 00 246889999999999988887642 5799
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC-------CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||++|.. ..++..+++++. +..++|++||...+.... ....|
T Consensus 79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------~~~~Y 148 (252)
T PRK07856 79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP----------GTAAY 148 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC----------CCchh
Confidence 99999852 223344444432 236899999976542211 11235
Q ss_pred chhhHHHHHHhhh------cCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~~------~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+++. ..+++..++||.+..+...... ............+ ...+..++|+|++++.
T Consensus 149 ~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~va~~~~~ 219 (252)
T PRK07856 149 GAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP---------LGRLATPADIAWACLF 219 (252)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCC---------CCCCcCHHHHHHHHHH
Confidence 5899998887742 2378999999998776321100 0011111111111 1124568999999999
Q ss_pred HhcCC--CCCCceEEecCCccc
Q 022578 202 VLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~~ 221 (295)
++... ...|..+.+.++...
T Consensus 220 L~~~~~~~i~G~~i~vdgg~~~ 241 (252)
T PRK07856 220 LASDLASYVSGANLEVHGGGER 241 (252)
T ss_pred HcCcccCCccCCEEEECCCcch
Confidence 98753 246788888887543
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.3e-13 Score=113.09 Aligned_cols=195 Identities=14% Similarity=0.127 Sum_probs=126.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|++.+..+.. .++.....++.++.+|++|++++..+++. ..+|+
T Consensus 15 tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 89 (254)
T PRK08085 15 TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAV-----AKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV 89 (254)
T ss_pred ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999865532211 01111123577889999999988887753 25899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..+...++++ +. +..++|++||.....+. .....|.
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y~ 159 (254)
T PRK08085 90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR----------DTITPYA 159 (254)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC----------CCCcchH
Confidence 99999852 1122233333 32 45789999987542111 1112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|...+.+.+ ..|+++..++||.+.++..... ....+........+ ...+...+|+|+++..
T Consensus 160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~~ 230 (254)
T PRK08085 160 ASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP---------AARWGDPQELIGAAVF 230 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence 89998888764 3589999999999988743210 00111122211111 1235678999999999
Q ss_pred HhcCC--CCCCceEEecCCc
Q 022578 202 VLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~ 219 (295)
++... ...|..+.+.++.
T Consensus 231 l~~~~~~~i~G~~i~~dgg~ 250 (254)
T PRK08085 231 LSSKASDFVNGHLLFVDGGM 250 (254)
T ss_pred HhCccccCCcCCEEEECCCe
Confidence 98753 2357777777664
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-13 Score=112.53 Aligned_cols=167 Identities=18% Similarity=0.164 Sum_probs=117.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC--CCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~ 78 (295)
|||+|+||.+++++|+++|++|++++|+++...+ +.....++.++.+|+++.+++.+++++. .+|.+||
T Consensus 7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE---------LHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 7999999999999999999999999998655211 1111246889999999999999998852 4789999
Q ss_pred cccC--------------------ChhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHH
Q 022578 79 INGR--------------------EADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN 134 (295)
Q Consensus 79 ~a~~--------------------~~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~ 134 (295)
++|. |..++.++++++. +..++|++||....-+ ......|..+|+.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~~Y~asK~a 147 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA----------LPRAEAYGASKAA 147 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC----------CCCCchhhHHHHH
Confidence 8863 1223445555543 3457999988653211 1112235699999
Q ss_pred HHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 135 ~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
.+.+.+ ..+++++++|||.++++.... ..... ...+..+|+|+.++..+..+
T Consensus 148 ~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~-------------~~~~~-------~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 148 VAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK-------------NTFAM-------PMIITVEQASQEIRAQLARG 206 (240)
T ss_pred HHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC-------------CCCCC-------CcccCHHHHHHHHHHHHhcC
Confidence 888753 468999999999999874211 00000 01367999999999998874
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=113.56 Aligned_cols=193 Identities=17% Similarity=0.173 Sum_probs=124.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||.++++.|+++|++|+++ .|++....... ..+.....++.++.+|+++++++..+++.. ++|
T Consensus 11 ~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (247)
T PRK05565 11 TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELL-----EEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKID 85 (247)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 6999999999999999999999998 88765421111 011112246889999999999988877642 799
Q ss_pred EEEEcccCCh--------------------hcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+|||++|... .+..++++++ . +.+++|++||...+..... ...|
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~----------~~~y 155 (247)
T PRK05565 86 ILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC----------EVLY 155 (247)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC----------ccHH
Confidence 9999998631 2233344433 2 4568999999765432111 1124
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.++ ...+++++.+|||.+..+...... .......... . ....+..++|++++++.
T Consensus 156 ~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~-~~~~~~~~~~--~-------~~~~~~~~~~va~~~~~ 225 (247)
T PRK05565 156 SASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS-EEDKEGLAEE--I-------PLGRLGKPEEIAKVVLF 225 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC-hHHHHHHHhc--C-------CCCCCCCHHHHHHHHHH
Confidence 47777666554 246899999999998776432211 1111111110 0 11234678999999999
Q ss_pred HhcCCC--CCCceEEecCC
Q 022578 202 VLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~ 218 (295)
++.... ..|+.+++.++
T Consensus 226 l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 226 LASDDASYITGQIITVDGG 244 (247)
T ss_pred HcCCccCCccCcEEEecCC
Confidence 987632 35777777765
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-13 Score=113.35 Aligned_cols=198 Identities=18% Similarity=0.276 Sum_probs=125.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ .++.....++.++.+|+++++++.++++.. ++|+
T Consensus 8 tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (256)
T PRK08643 8 TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAA-----DKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV 82 (256)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999999865422111 111222346788999999999888877642 6899
Q ss_pred EEEcccCCh--------------------hcHH----HHHHhCC---CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGREA--------------------DEVE----PILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~~--------------------~~~~----~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|... .++. .+++.+. ...++|++||...+.... ....|
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y 152 (256)
T PRK08643 83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP----------ELAVY 152 (256)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC----------CCchh
Confidence 999998621 1222 2333332 235899999876432211 11235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHH--cCCCcc-----cCCCCCceeeeeeHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIP-----IPGSGIQVTQLGHVKD 194 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~i~~~D 194 (295)
..+|...+.+.+ ..|++++.++||.+.++... .+..... .+.+.. +... .....+..++|
T Consensus 153 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 226 (256)
T PRK08643 153 SSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMF-----DIAHQVGENAGKPDEWGMEQFAKD-ITLGRLSEPED 226 (256)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhh-----HHHhhhccccCCCchHHHHHHhcc-CCCCCCcCHHH
Confidence 589998876653 46899999999999887321 1110000 000000 0000 00113467899
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+|+++..++... ..+|..+.+.++.
T Consensus 227 va~~~~~L~~~~~~~~~G~~i~vdgg~ 253 (256)
T PRK08643 227 VANCVSFLAGPDSDYITGQTIIVDGGM 253 (256)
T ss_pred HHHHHHHHhCccccCccCcEEEeCCCe
Confidence 999999998753 3467788887764
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.7e-13 Score=112.72 Aligned_cols=161 Identities=16% Similarity=0.172 Sum_probs=116.6
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~ 78 (295)
|||+|++|.++++.|+++|+ +|++++|++++... ...++.++.+|+.+++++.++++.. .+|+|||
T Consensus 12 tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 12 TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------LGPRVVPLQLDVTDPASVAAAAEAASDVTILVN 79 (238)
T ss_pred ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 79999999999999999998 99999998766322 1257889999999999999888754 4899999
Q ss_pred cccC-C--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 79 INGR-E--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 79 ~a~~-~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+++. . ..+..++++++ . +..+||++||...+.+.. ....|..+
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~----------~~~~y~~s 149 (238)
T PRK08264 80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFP----------NLGTYSAS 149 (238)
T ss_pred CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCC----------CchHhHHH
Confidence 9986 1 12344455543 2 567899999977653211 12235589
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|...|.+.+ ..+++++++||+.+.++... + . .+ ..+..+|+++.++..+.
T Consensus 150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~-------------~--~--~~------~~~~~~~~a~~~~~~~~ 206 (238)
T PRK08264 150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA-------------G--L--DA------PKASPADVARQILDALE 206 (238)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc-------------c--C--Cc------CCCCHHHHHHHHHHHHh
Confidence 998887653 24899999999988765210 0 0 01 14778899999998887
Q ss_pred CC
Q 022578 205 NE 206 (295)
Q Consensus 205 ~~ 206 (295)
.+
T Consensus 207 ~~ 208 (238)
T PRK08264 207 AG 208 (238)
T ss_pred CC
Confidence 53
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-13 Score=112.30 Aligned_cols=196 Identities=15% Similarity=0.200 Sum_probs=127.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|++++..... .++.....++.++.+|+++++++.+++++. .+|+
T Consensus 12 tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (254)
T PRK07478 12 TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV-----AEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI 86 (254)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999876532211 112222346889999999999888877642 7899
Q ss_pred EEEcccCCh---------------------h----cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGREA---------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~~---------------------~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|... . .++.++..+. +..++|++||...+.... .....|
T Consensus 87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~---------~~~~~Y 157 (254)
T PRK07478 87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF---------PGMAAY 157 (254)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC---------CCcchh
Confidence 999998521 1 1223344443 556899999976542110 011235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|+..+.+.+ ..++++..++||.+-.+.... ..............+ ...+..++|+|++++
T Consensus 158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~ 228 (254)
T PRK07478 158 AASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA---------LKRMAQPEEIAQAAL 228 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence 589998887653 347999999999987763211 000111111111111 112457999999999
Q ss_pred HHhcCCC--CCCceEEecCCc
Q 022578 201 QVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~~ 219 (295)
.++.+.. ..|..+.+.++.
T Consensus 229 ~l~s~~~~~~~G~~~~~dgg~ 249 (254)
T PRK07478 229 FLASDAASFVTGTALLVDGGV 249 (254)
T ss_pred HHcCchhcCCCCCeEEeCCch
Confidence 9987532 357788887664
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=114.50 Aligned_cols=195 Identities=19% Similarity=0.202 Sum_probs=124.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc--CCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+|+||.++++.|+++|++|++++|+..+....+. ..+.... ..+.++.+|++|++++.+++++ ..+
T Consensus 5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFA----AEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 7999999999999999999999999998322111110 0011111 1245688999999998877754 268
Q ss_pred cEEEEcccCCh--------------------h----cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGREA--------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~~--------------------~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|+|||++|... . .++.++.++. +.+++|++||...+..... ...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~----------~~~ 150 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD----------YTA 150 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC----------Cch
Confidence 99999998521 1 3556666665 5679999999877643221 123
Q ss_pred cchhhHHHHHHhhh---------cCCcEEEeccCeeecCCCCCch----HHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 128 RHKGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 128 ~~~~k~~~E~~~~~---------~~~~~~i~R~~~i~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
|..+|...+.+.+. .+++++.++||.+.+|...... .......+.++. ....+.+++|
T Consensus 151 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 221 (251)
T PRK07069 151 YNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV---------PLGRLGEPDD 221 (251)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC---------CCCCCcCHHH
Confidence 55888888777642 2488999999999887432100 000111111111 1123457999
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCC
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
+|++++.++.++ ..+|..+.+.++
T Consensus 222 va~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 222 VAHAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred HHHHHHHHcCccccCccCCEEEECCC
Confidence 999999987653 235666666554
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.2e-13 Score=111.15 Aligned_cols=194 Identities=13% Similarity=0.125 Sum_probs=125.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++...... ..+.....++.++.+|+++++++.++++.. ++|+
T Consensus 16 tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 90 (263)
T PRK07814 16 TGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVA-----EQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI 90 (263)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865522111 111122346888999999999988777642 7899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC-------CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR--------------------EADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||+|+. |..++.++++++. +..++|++||....... .....|
T Consensus 91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~~~~~Y 160 (263)
T PRK07814 91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG----------RGFAAY 160 (263)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC----------CCCchh
Confidence 9999984 2233455555542 44689999986432111 112235
Q ss_pred chhhHHHHHHhhh------cCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~~------~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|..++.+.+. .+++++.++||.+..+..... ....+........+ ......++|+|++++.
T Consensus 161 ~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~ 231 (263)
T PRK07814 161 GTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATP---------LRRLGDPEDIAAAAVY 231 (263)
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence 5999998887642 257888999998876521100 00111111111111 1123578999999999
Q ss_pred HhcCC--CCCCceEEecCC
Q 022578 202 VLGNE--KASRQVFNISGE 218 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~ 218 (295)
++... ...|+.+.+.++
T Consensus 232 l~~~~~~~~~g~~~~~~~~ 250 (263)
T PRK07814 232 LASPAGSYLTGKTLEVDGG 250 (263)
T ss_pred HcCccccCcCCCEEEECCC
Confidence 98753 235677777665
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.52 E-value=5e-13 Score=110.37 Aligned_cols=191 Identities=18% Similarity=0.211 Sum_probs=122.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.++++.|+++|+.|++..|+..+..... .....++.++.+|+++.+++..++++ .++|+
T Consensus 12 tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 12 TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALA--------AELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999998888765522111 11124688999999999998887653 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..+..++++++ . +..++|++||...+.+.. ....|.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~ 153 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP----------GQANYC 153 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC----------CCcchH
Confidence 99999852 12333444443 1 557899999975432211 112355
Q ss_pred hhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+. ...+++++.++||.+..+..... ........ .+ ..+ ...+.+++|+++++..+
T Consensus 154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~-~~-~~~-------~~~~~~~~~ia~~~~~l 223 (245)
T PRK12936 154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-NDKQKEAI-MG-AIP-------MKRMGTGAEVASAVAYL 223 (245)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc-ChHHHHHH-hc-CCC-------CCCCcCHHHHHHHHHHH
Confidence 7787665554 23589999999998766532110 01010111 11 111 12245699999999988
Q ss_pred hcCCC--CCCceEEecCCc
Q 022578 203 LGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~ 219 (295)
+.... ..|+.+++.++.
T Consensus 224 ~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 224 ASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred cCccccCcCCCEEEECCCc
Confidence 86532 357889988764
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.6e-13 Score=113.25 Aligned_cols=193 Identities=13% Similarity=0.182 Sum_probs=124.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.....+.. .....++.++.+|+++.+++.++++.. .+|+
T Consensus 12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 12 TGGATLIGAAVARALVAAGARVAIVDIDADNGAAVA--------ASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999875422111 111246889999999999988877642 6899
Q ss_pred EEEcccCC-------------------hhcHHHHH----HhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGRE-------------------ADEVEPIL----DALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~-------------------~~~~~~ll----~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||++|.. ..+...++ ..+. +..++|++||...+.... ....|..+
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------~~~~Y~as 153 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT----------GRWLYPAS 153 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC----------CCchhHHH
Confidence 99999852 11222233 3332 446899999876532211 11235588
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch--HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
|...+.+.+ ..+++++.++||.+..+...... ......... ... . ....+..++|+|+++..+
T Consensus 154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~--~~~-~-----p~~r~~~p~dva~~~~~l 225 (261)
T PRK08265 154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVA--APF-H-----LLGRVGDPEEVAQVVAFL 225 (261)
T ss_pred HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhh--ccc-C-----CCCCccCHHHHHHHHHHH
Confidence 988877663 25899999999988776311000 000000000 000 0 111245789999999999
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+... ...|..+.+.++.
T Consensus 226 ~s~~~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 226 CSDAASFVTGADYAVDGGY 244 (261)
T ss_pred cCccccCccCcEEEECCCe
Confidence 8753 2367788887774
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.3e-13 Score=111.22 Aligned_cols=194 Identities=13% Similarity=0.176 Sum_probs=126.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||..++++|+++|++|+++.|+. .... . ...+.....++.++.+|+++.+++..++++. .+|+
T Consensus 21 tGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~-~----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 94 (258)
T PRK06935 21 TGGNTGLGQGYAVALAKAGADIIITTHGT-NWDE-T----RRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI 94 (258)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHH-H----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999873 2111 0 1111222346889999999999888877643 6899
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.. ..+ ++.++..+. +..++|++||...+.+... ...|.
T Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~ 164 (258)
T PRK06935 95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF----------VPAYT 164 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC----------chhhH
Confidence 99999862 112 222333333 4579999999876533211 12355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|...+.+.+ ..|++++.++||.+..+..... ............ ++ ...+..++|+|+.+..
T Consensus 165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~ 235 (258)
T PRK06935 165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR--IP-------AGRWGEPDDLMGAAVF 235 (258)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHH
Confidence 89998887763 3589999999999887642110 000111111111 11 1235678999999999
Q ss_pred HhcCCC--CCCceEEecCCc
Q 022578 202 VLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~~ 219 (295)
++.+.. ..|.++.+.++.
T Consensus 236 l~s~~~~~~~G~~i~~dgg~ 255 (258)
T PRK06935 236 LASRASDYVNGHILAVDGGW 255 (258)
T ss_pred HcChhhcCCCCCEEEECCCe
Confidence 887532 357788887763
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-12 Score=107.43 Aligned_cols=184 Identities=14% Similarity=0.147 Sum_probs=121.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh-HHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~ 79 (295)
|||+|+||.+++++|+++|++|++++|++.... ..++.++.+|++++ +.+.+.+. .+|+|||+
T Consensus 11 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~--~id~lv~~ 74 (235)
T PRK06550 11 TGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------------SGNFHFLQLDLSDDLEPLFDWVP--SVDILCNT 74 (235)
T ss_pred cCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------------CCcEEEEECChHHHHHHHHHhhC--CCCEEEEC
Confidence 799999999999999999999999998864411 14688999999887 44444444 78999999
Q ss_pred ccCC---------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 80 NGRE---------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 80 a~~~---------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
+|.. ..++.++++++. +..++|++||...+.... ....|..+|
T Consensus 75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~~sK 144 (235)
T PRK06550 75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG----------GGAAYTASK 144 (235)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC----------CCcccHHHH
Confidence 9841 123344444432 446899999976542211 122355888
Q ss_pred HHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 133 ~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
...+.+.+ ..++++++++||.+.++.....+ ...+........+ ...+...+|+|++++.++.
T Consensus 145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~s 215 (235)
T PRK06550 145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEVAELTLFLAS 215 (235)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHHHHHHHHHcC
Confidence 88776653 35899999999999887532111 1111122222211 1235678999999999986
Q ss_pred CC--CCCCceEEecCCc
Q 022578 205 NE--KASRQVFNISGEK 219 (295)
Q Consensus 205 ~~--~~~~~~~~i~~~~ 219 (295)
+. ...|..+.+.++.
T Consensus 216 ~~~~~~~g~~~~~~gg~ 232 (235)
T PRK06550 216 GKADYMQGTIVPIDGGW 232 (235)
T ss_pred hhhccCCCcEEEECCce
Confidence 53 3356777777653
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.2e-13 Score=108.92 Aligned_cols=187 Identities=13% Similarity=0.098 Sum_probs=123.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|++...... +.. .++.++.+|+++++++..++++. ++|+
T Consensus 8 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 77 (236)
T PRK06483 8 TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDG--------LRQ--AGAQCIQADFSTNAGIMAFIDELKQHTDGLRA 77 (236)
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH--------HHH--cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence 79999999999999999999999999987542111 111 24788999999998888777642 5899
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--C--CCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||++|.. ..+. +.++..+. + ..++|++||....... .....
T Consensus 78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------~~~~~ 147 (236)
T PRK06483 78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS----------DKHIA 147 (236)
T ss_pred EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC----------CCCcc
Confidence 99999852 1111 22333333 2 4689999986542111 11123
Q ss_pred cchhhHHHHHHhhh------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 128 RHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 128 ~~~~k~~~E~~~~~------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
|..+|+..+.+.+. .++++..++||.+..+.... ...........+.. -+..++|+|+++..
T Consensus 148 Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~va~~~~~ 215 (236)
T PRK06483 148 YAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLLK---------IEPGEEEIIDLVDY 215 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCccc---------cCCCHHHHHHHHHH
Confidence 55999999888742 35899999999885432111 11112222221111 12358999999999
Q ss_pred HhcCCCCCCceEEecCCc
Q 022578 202 VLGNEKASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~~~~~~~~~i~~~~ 219 (295)
++......|..+.+.++.
T Consensus 216 l~~~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 216 LLTSCYVTGRSLPVDGGR 233 (236)
T ss_pred HhcCCCcCCcEEEeCccc
Confidence 997655678888887764
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-13 Score=113.65 Aligned_cols=170 Identities=16% Similarity=0.199 Sum_probs=116.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.++++.|+++|++|++++|+++...+... .+.. ..++.++.+|++|++++.+++++. .+|+
T Consensus 8 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 8 TGASSGIGQALAREYARQGATLGLVARRTDALQAFAA-----RLPK-AARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----hccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 7999999999999999999999999998755321110 0011 126889999999999998877631 4899
Q ss_pred EEEcccCC---------------------hhcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE---------------------ADEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|.. ..++.+++ .++. +..++|++||...+...+ ....|
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y 151 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLP----------GAGAY 151 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC----------CCcch
Confidence 99998852 12233333 3443 567999999876542211 11235
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|+..+.+. +..+++++++|||.+.++.... ..... -..+..+++++.++.
T Consensus 152 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~~-------~~~~~~~~~a~~~~~ 211 (257)
T PRK07024 152 SASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH-------------NPYPM-------PFLMDADRFAARAAR 211 (257)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc-------------CCCCC-------CCccCHHHHHHHHHH
Confidence 59999988776 3468999999999998873110 00000 013579999999999
Q ss_pred HhcCC
Q 022578 202 VLGNE 206 (295)
Q Consensus 202 ~~~~~ 206 (295)
++.++
T Consensus 212 ~l~~~ 216 (257)
T PRK07024 212 AIARG 216 (257)
T ss_pred HHhCC
Confidence 99764
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.6e-13 Score=110.56 Aligned_cols=194 Identities=17% Similarity=0.240 Sum_probs=127.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+|.||..+++.|+++|++|++++|+.+...... .++... ..++.++.+|+++.+++..+++. .++
T Consensus 15 tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 89 (257)
T PRK09242 15 TGASKGIGLAIAREFLGLGADVLIVARDADALAQAR-----DELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL 89 (257)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999999999999875522111 111111 23678899999999888776654 268
Q ss_pred cEEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|+|||++|.. ..+..++++++ + +..++|++||...+.+.. ....
T Consensus 90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------~~~~ 159 (257)
T PRK09242 90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVR----------SGAP 159 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCC----------CCcc
Confidence 9999999862 22344444443 2 457999999987653321 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|...+.+++ ..+++++.++||.+.++..... ....+........+. .-+...+|++.++
T Consensus 160 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~ 230 (257)
T PRK09242 160 YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAAV 230 (257)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence 5588888887663 3589999999999988753211 011122222222211 1234589999999
Q ss_pred HHHhcCCC--CCCceEEecCC
Q 022578 200 VQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~ 218 (295)
..++.+.. ..|+.+.+.++
T Consensus 231 ~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 231 AFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred HHHhCcccccccCCEEEECCC
Confidence 99986532 35777777665
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.6e-13 Score=111.37 Aligned_cols=195 Identities=14% Similarity=0.173 Sum_probs=125.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+... .... ..+.....++.++.+|+++.+++..++++ ..+|+
T Consensus 12 tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~ 85 (263)
T PRK08226 12 TGALQGIGEGIARVFARHGANLILLDISPEI-EKLA-----DELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI 85 (263)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999987642 1110 01111124678899999999998888764 26899
Q ss_pred EEEcccC--------------------ChhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGR--------------------EADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|. |..+..+++++ +. +..++|++||....... ......|.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~Y~ 156 (263)
T PRK08226 86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA---------DPGETAYA 156 (263)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC---------CCCcchHH
Confidence 9999985 12234444444 22 45689999986531000 01112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-------chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
.+|...+.+.+ ..+++++.++||.+.++.... .........+..+.+. ..+..++|+
T Consensus 157 ~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~~v 227 (263)
T PRK08226 157 LTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL---------RRLADPLEV 227 (263)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC---------CCCCCHHHH
Confidence 89998887663 247999999999998873110 0011122222222111 124578999
Q ss_pred HHHHHHHhcCC--CCCCceEEecCCc
Q 022578 196 ARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 196 a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
|+++..++... ...|+.+.+.++.
T Consensus 228 a~~~~~l~~~~~~~~~g~~i~~dgg~ 253 (263)
T PRK08226 228 GELAAFLASDESSYLTGTQNVIDGGS 253 (263)
T ss_pred HHHHHHHcCchhcCCcCceEeECCCc
Confidence 99999988643 3467777777763
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-12 Score=106.56 Aligned_cols=188 Identities=18% Similarity=0.210 Sum_probs=120.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|.||+.++++|+++|++|+++.|+.....+. +.. ..+++++.+|++|.+++.+.+++. .+|++||+
T Consensus 12 tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~--------l~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 12 LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAER--------LAQ-ETGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHH--------HHH-HhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 79999999999999999999998876643321111 111 124678899999999888888753 48999999
Q ss_pred ccCCh--------------------hcHHHHH----HhCCCCCcEEEeeccccccCCCCCCCCCCCCCCC-CccchhhHH
Q 022578 80 NGREA--------------------DEVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLN 134 (295)
Q Consensus 80 a~~~~--------------------~~~~~ll----~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~~~k~~ 134 (295)
+|... .+...++ ..++...++|++||..... .+..+ ..|..+|+.
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~~Y~~sKaa 152 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPVAGMAAYAASKSA 152 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCCCCCcchHHhHHH
Confidence 98621 1222232 2233456999999865311 11112 235599999
Q ss_pred HHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 022578 135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 207 (295)
Q Consensus 135 ~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 207 (295)
.|.+++ ..++++++++||.+..+...... . .........+ ...+..++|+++++..++.+..
T Consensus 153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~-~-~~~~~~~~~~---------~~~~~~p~~~a~~~~~l~s~~~ 221 (237)
T PRK12742 153 LQGMARGLARDFGPRGITINVVQPGPIDTDANPANG-P-MKDMMHSFMA---------IKRHGRPEEVAGMVAWLAGPEA 221 (237)
T ss_pred HHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc-H-HHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCccc
Confidence 987763 35799999999999876432110 1 1111111111 1124678999999999987532
Q ss_pred --CCCceEEecCC
Q 022578 208 --ASRQVFNISGE 218 (295)
Q Consensus 208 --~~~~~~~i~~~ 218 (295)
..|..+.+.++
T Consensus 222 ~~~~G~~~~~dgg 234 (237)
T PRK12742 222 SFVTGAMHTIDGA 234 (237)
T ss_pred CcccCCEEEeCCC
Confidence 35677777665
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.8e-13 Score=113.01 Aligned_cols=197 Identities=18% Similarity=0.180 Sum_probs=126.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--ccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+|.||.+++++|+++|++|++++|+++...+.. .++.. ...++.++.+|++|++++..++++ ..+
T Consensus 13 tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 87 (260)
T PRK07063 13 TGAAQGIGAAIARAFAREGAAVALADLDAALAERAA-----AAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL 87 (260)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 799999999999999999999999999765532111 01111 124588899999999988887764 269
Q ss_pred cEEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|++||++|.. ..++..++++ +. +..++|++||...+.... ....
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~ 157 (260)
T PRK07063 88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP----------GCFP 157 (260)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCC----------CchH
Confidence 9999999852 1223333333 32 456899999976542211 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-----HHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
|..+|+..+.+.+ ..|+++..++||.+-.+.....+ ............+ ...+..++|+
T Consensus 158 Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~v 228 (260)
T PRK07063 158 YPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQP---------MKRIGRPEEV 228 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCC---------CCCCCCHHHH
Confidence 4589998887763 35799999999998766321000 0000111111111 0123568999
Q ss_pred HHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 196 ARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 196 a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
|++++.++.+. ...|..+.+.++..+
T Consensus 229 a~~~~fl~s~~~~~itG~~i~vdgg~~~ 256 (260)
T PRK07063 229 AMTAVFLASDEAPFINATCITIDGGRSV 256 (260)
T ss_pred HHHHHHHcCccccccCCcEEEECCCeee
Confidence 99999998753 246777888776543
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.7e-13 Score=111.38 Aligned_cols=195 Identities=15% Similarity=0.166 Sum_probs=127.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||+.++++|+++|++|++++|+++...+. ...+.....++.++.+|+++++++..++++. .+|+
T Consensus 17 tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 91 (256)
T PRK06124 17 TGSARGLGFEIARALAGAGAHVLVNGRNAATLEAA-----VAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI 91 (256)
T ss_pred ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 69999999999999999999999999987542211 1112222346889999999999888877642 5799
Q ss_pred EEEcccCC--------------------hhcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+++.. ..++.+++ +.+. +..++|++||...+.... ....|.
T Consensus 92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~Y~ 161 (256)
T PRK06124 92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA----------GDAVYP 161 (256)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC----------CccHhH
Confidence 99999862 11223333 4443 567899999876532211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|...+.+.+ ..++++..++||.+.++...... ...+....... .+ ...+++++|++++++.
T Consensus 162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~a~~~~~ 232 (256)
T PRK06124 162 AAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR--TP-------LGRWGRPEEIAGAAVF 232 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHH
Confidence 88888776653 35899999999999988531110 11111112111 11 1236889999999999
Q ss_pred HhcCCC--CCCceEEecCCc
Q 022578 202 VLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~~ 219 (295)
++.++. ..|+.+.+.++.
T Consensus 233 l~~~~~~~~~G~~i~~dgg~ 252 (256)
T PRK06124 233 LASPAASYVNGHVLAVDGGY 252 (256)
T ss_pred HcCcccCCcCCCEEEECCCc
Confidence 998643 347777776654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8e-13 Score=109.82 Aligned_cols=195 Identities=17% Similarity=0.143 Sum_probs=126.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.+...... ..+.....++..+.+|+++++++.+++++ ..+|+
T Consensus 15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 89 (253)
T PRK05867 15 TGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLA-----DEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI 89 (253)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865522111 11122224678899999999998887764 27999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|.. ..+...+++++ . + ..++|++||....-.. .+.....|
T Consensus 90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------~~~~~~~Y 161 (253)
T PRK05867 90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN--------VPQQVSHY 161 (253)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC--------CCCCccch
Confidence 99999862 22333344443 2 2 3478999886532100 00011235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|+..+.+.+ ..|+++..++||.+-.+.... . ...........+. ..+..++|+|++++.
T Consensus 162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~-~-~~~~~~~~~~~~~---------~r~~~p~~va~~~~~ 230 (253)
T PRK05867 162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP-Y-TEYQPLWEPKIPL---------GRLGRPEELAGLYLY 230 (253)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc-c-hHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence 589998887763 358999999999997764321 1 1111222121111 124679999999999
Q ss_pred HhcCC--CCCCceEEecCCc
Q 022578 202 VLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~ 219 (295)
++... ...|+.+.+.++.
T Consensus 231 L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 231 LASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred HcCcccCCcCCCeEEECCCc
Confidence 98753 2367788887764
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.2e-13 Score=113.09 Aligned_cols=195 Identities=13% Similarity=0.191 Sum_probs=127.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...... .++.....++.++.+|+.+.+++..++++ ..+|+
T Consensus 16 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 90 (278)
T PRK08277 16 TGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVV-----AEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI 90 (278)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865422111 11122224688899999999888877654 27899
Q ss_pred EEEcccCCh-----------------------------------hcH----HHHHHhCC--CCCcEEEeeccccccCCCC
Q 022578 76 VYDINGREA-----------------------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDL 114 (295)
Q Consensus 76 vi~~a~~~~-----------------------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~ 114 (295)
+||++|... .+. +.++..+. +..++|++||...+....
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~- 169 (278)
T PRK08277 91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLT- 169 (278)
T ss_pred EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCC-
Confidence 999998421 111 22333343 457899999988764211
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch------HHHHHHHHHcCCCcccCC
Q 022578 115 LPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPG 181 (295)
Q Consensus 115 ~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~ 181 (295)
....|..+|+..+.+++ ..++++..++||.+..+...... ............
T Consensus 170 ---------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------ 234 (278)
T PRK08277 170 ---------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHT------ 234 (278)
T ss_pred ---------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccC------
Confidence 11235589998887763 35899999999999887421100 000111111111
Q ss_pred CCCceeeeeeHHHHHHHHHHHhcC-CC--CCCceEEecCCc
Q 022578 182 SGIQVTQLGHVKDLARAFVQVLGN-EK--ASRQVFNISGEK 219 (295)
Q Consensus 182 ~~~~~~~~i~~~D~a~~i~~~~~~-~~--~~~~~~~i~~~~ 219 (295)
....+..++|+|++++.++.. .. ..|..+.+.++.
T Consensus 235 ---p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~ 272 (278)
T PRK08277 235 ---PMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF 272 (278)
T ss_pred ---CccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence 112346689999999998876 32 357788887763
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.1e-13 Score=116.69 Aligned_cols=186 Identities=17% Similarity=0.188 Sum_probs=123.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||..++++|+++|++|++++|+....... ..++.+...++.++.+|++|.+++.++++. ..+|+
T Consensus 14 TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~-----~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~ 88 (334)
T PRK07109 14 TGASAGVGRATARAFARRGAKVVLLARGEEGLEAL-----AAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT 88 (334)
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence 79999999999999999999999999986552211 111222235688999999999999887653 26899
Q ss_pred EEEcccCCh------------------------hcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~------------------------~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+++... ..++.++..+. +..++|++||...+.... ....|.
T Consensus 89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~----------~~~~Y~ 158 (334)
T PRK07109 89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP----------LQSAYC 158 (334)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC----------cchHHH
Confidence 999998621 12344555554 467999999988764321 112345
Q ss_pred hhhHHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 130 ~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|...+.+.+ ..++++++++||.+.+|.. .+. ........ .....+..++|+|++++
T Consensus 159 asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~-----~~~-~~~~~~~~-------~~~~~~~~pe~vA~~i~ 225 (334)
T PRK07109 159 AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF-----DWA-RSRLPVEP-------QPVPPIYQPEVVADAIL 225 (334)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh-----hhh-hhhccccc-------cCCCCCCCHHHHHHHHH
Confidence 88887766542 1468999999999877621 111 10000100 01123467999999999
Q ss_pred HHhcCCCCCCceEEecC
Q 022578 201 QVLGNEKASRQVFNISG 217 (295)
Q Consensus 201 ~~~~~~~~~~~~~~i~~ 217 (295)
.++.++ .+.+.+++
T Consensus 226 ~~~~~~---~~~~~vg~ 239 (334)
T PRK07109 226 YAAEHP---RRELWVGG 239 (334)
T ss_pred HHHhCC---CcEEEeCc
Confidence 999875 23455544
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5e-13 Score=104.50 Aligned_cols=221 Identities=18% Similarity=0.160 Sum_probs=160.3
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||+-|.+|..++..|..+ |.+-.+++.-.+.....+ .+-.++..|+.|...+++..-...+|.+||.
T Consensus 50 TG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~------------~~GPyIy~DILD~K~L~eIVVn~RIdWL~Hf 117 (366)
T KOG2774|consen 50 TGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT------------DVGPYIYLDILDQKSLEEIVVNKRIDWLVHF 117 (366)
T ss_pred ecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc------------ccCCchhhhhhccccHHHhhcccccceeeeH
Confidence 799999999999988776 654333332222211111 3445788899999999998887899999997
Q ss_pred ccC---------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCC-CCCCCCCCCCCCCccc-hhhHHHHHH---
Q 022578 80 NGR---------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESV--- 138 (295)
Q Consensus 80 a~~---------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~p~~~~-~~k~~~E~~--- 138 (295)
.+. |..+..|+++.++ ..-++..-|+++.||..+ ..|.++-....|.+-| .+|..+|-+
T Consensus 118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy 197 (366)
T KOG2774|consen 118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEY 197 (366)
T ss_pred HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHH
Confidence 432 7789999999988 444777789999999754 3444444445566654 899887754
Q ss_pred -hhhcCCcEEEeccCeeecCC---C-C-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC--CCC
Q 022578 139 -LESKGVNWTSLRPVYIYGPL---N-Y-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR 210 (295)
Q Consensus 139 -~~~~~~~~~i~R~~~i~g~~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~--~~~ 210 (295)
-...|+++-.+|.+.++... . . ......+.....+|+. ..+-.++....+++.+|+-+++++++..+. ...
T Consensus 198 ~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~-tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkr 276 (366)
T KOG2774|consen 198 FNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKH-TCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKR 276 (366)
T ss_pred HHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCc-ccccCCCccCceeehHHHHHHHHHHHhCCHHHhhh
Confidence 35689999999999998752 2 1 2234445566666764 333456788899999999999999887643 356
Q ss_pred ceEEecCCcccCHHHHHHHHHHHhC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
++||+++ -.+|.+|+++.+.+...
T Consensus 277 r~ynvt~-~sftpee~~~~~~~~~p 300 (366)
T KOG2774|consen 277 RTYNVTG-FSFTPEEIADAIRRVMP 300 (366)
T ss_pred heeeece-eccCHHHHHHHHHhhCC
Confidence 7899987 66999999999999863
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.5e-12 Score=108.07 Aligned_cols=192 Identities=15% Similarity=0.124 Sum_probs=125.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||..++++|+++|++|++++|+..... ...+.....++.++.+|+++.+++.+++++ ..+|+
T Consensus 14 tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 14 TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPET-------QAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEecCchHHHH-------HHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999887643210 111122234688999999999999888864 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|.. ..+...+.++ +. + ..++|++||...+..... ...|
T Consensus 87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----------~~~Y 156 (251)
T PRK12481 87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR----------VPSY 156 (251)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC----------Ccch
Confidence 99999862 2223333333 32 2 368999999876543211 1235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|...+.+.+ ..|+++..++||.+-.+..... ............ + +. ..+..++|+|+++.
T Consensus 157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~--p~-----~~~~~peeva~~~~ 227 (251)
T PRK12481 157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER--I--PA-----SRWGTPDDLAGPAI 227 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc--C--CC-----CCCcCHHHHHHHHH
Confidence 589998887763 4689999999999876532110 000111111111 1 11 12467999999999
Q ss_pred HHhcCC--CCCCceEEecCC
Q 022578 201 QVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~ 218 (295)
.++... ...|..+.+.++
T Consensus 228 ~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 228 FLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred HHhCccccCcCCceEEECCC
Confidence 998652 345777777665
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.6e-13 Score=111.84 Aligned_cols=181 Identities=13% Similarity=0.123 Sum_probs=118.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||..++++|+++|++|++++|+.+...... ..+.....++.++.+|+++.+++..+++. ..+|+
T Consensus 6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETL-----KLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876532111 11122235688899999999888887753 26999
Q ss_pred EEEcccCCh--------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|... .+ ++.++..+. +..++|++||...+.... ....|.
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y~ 150 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP----------AMSSYN 150 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC----------CchHHH
Confidence 999998621 11 223444444 567999999987643211 112345
Q ss_pred hhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCc--hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 130 ~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|+..+.+. ...++++++++||.+.++..... ......... . .. ....+++++|+|+.++
T Consensus 151 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~-~~--------~~~~~~~~~~vA~~i~ 220 (270)
T PRK05650 151 VAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQV-G-KL--------LEKSPITAADIADYIY 220 (270)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHH-H-HH--------hhcCCCCHHHHHHHHH
Confidence 8888766554 23589999999999988743210 001110000 0 00 0113478999999999
Q ss_pred HHhcCC
Q 022578 201 QVLGNE 206 (295)
Q Consensus 201 ~~~~~~ 206 (295)
..+.++
T Consensus 221 ~~l~~~ 226 (270)
T PRK05650 221 QQVAKG 226 (270)
T ss_pred HHHhCC
Confidence 999864
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.1e-13 Score=110.94 Aligned_cols=195 Identities=13% Similarity=0.159 Sum_probs=129.1
Q ss_pred CCcCCcchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|.||+.++++|+++|++ |++++|++....... ..+......+.++.+|+++++++.++++.. ++|
T Consensus 12 tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 86 (260)
T PRK06198 12 TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA-----AELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLD 86 (260)
T ss_pred eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999998 999999865422110 111122346778999999999988887642 689
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C---CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+|||+++.. ..+..++++++ . ...++|++||...++.... ...
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~----------~~~ 156 (260)
T PRK06198 87 ALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF----------LAA 156 (260)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC----------cch
Confidence 999999852 12334444443 2 2357999999887653221 123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC------chHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
|..+|...|.+.+ ..+++++.++||.++++.... .....+........ ....+++++|
T Consensus 157 Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 227 (260)
T PRK06198 157 YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------PFGRLLDPDE 227 (260)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------CccCCcCHHH
Confidence 5589998887764 346899999999999875310 00011111111111 1224578999
Q ss_pred HHHHHHHHhcCCC--CCCceEEecCCc
Q 022578 195 LARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 195 ~a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+++++..++.+.. ..|+.+.+.++.
T Consensus 228 ~a~~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 228 VARAVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred HHHHHHHHcChhhCCccCceEeECCcc
Confidence 9999999986542 357788887754
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-12 Score=107.95 Aligned_cols=195 Identities=15% Similarity=0.178 Sum_probs=125.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.++++.|+++|++|++++|+........ ..+.....++.++.+|+++++++..++++. .+|+
T Consensus 7 tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 7 TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAK-----LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 799999999999999999999999999865422111 111222246889999999999888877642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC-----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||++|.. ..+..++++++ + ...++|++||...+... .....|
T Consensus 82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~Y 151 (252)
T PRK07677 82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG----------PGVIHS 151 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC----------CCCcch
Confidence 99999741 12334444443 2 23689999987543211 112235
Q ss_pred chhhHHHHHHhh--------hcCCcEEEeccCeeecCCCCCch--HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 129 HKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 129 ~~~k~~~E~~~~--------~~~~~~~i~R~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..+|...+.+.+ .+|+++..++||.+.+....... .....+.+.+..++ ..+...+|++++
T Consensus 152 ~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~ 222 (252)
T PRK07677 152 AAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL---------GRLGTPEEIAGL 222 (252)
T ss_pred HHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC---------CCCCCHHHHHHH
Confidence 588888776653 24899999999998854221100 11122222222111 124568999999
Q ss_pred HHHHhcCC--CCCCceEEecCCc
Q 022578 199 FVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+..++... ...|..+.+.++.
T Consensus 223 ~~~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 223 AYFLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred HHHHcCccccccCCCEEEECCCe
Confidence 99887653 3467777777663
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-12 Score=109.03 Aligned_cols=195 Identities=16% Similarity=0.170 Sum_probs=126.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|+++.|++.+..+.. ..+.....++.++.+|+++.+++..++.+ ..+|+
T Consensus 16 tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 90 (265)
T PRK07097 16 TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL-----AAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI 90 (265)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 799999999999999999999999988876532111 11122224688999999999999888864 25899
Q ss_pred EEEcccCC--------------------hhcHH----HHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~----~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.. ..+.. .++..+. +..++|++||....... .....|.
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~ 160 (265)
T PRK07097 91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR----------ETVSAYA 160 (265)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC----------CCCccHH
Confidence 99999862 11222 2333333 56799999986432110 1112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-------HHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
.+|...+.+.+ ..+++++.++||.+.++...... ...+........+ ...+..++|+
T Consensus 161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dv 231 (265)
T PRK07097 161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP---------AARWGDPEDL 231 (265)
T ss_pred HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC---------ccCCcCHHHH
Confidence 89998887763 35899999999999887421100 0001111111111 1234668999
Q ss_pred HHHHHHHhcCC--CCCCceEEecCCc
Q 022578 196 ARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 196 a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
|+.+..++.+. ...|..+.+.++.
T Consensus 232 a~~~~~l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 232 AGPAVFLASDASNFVNGHILYVDGGI 257 (265)
T ss_pred HHHHHHHhCcccCCCCCCEEEECCCc
Confidence 99999998763 3467777777764
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.5e-13 Score=112.09 Aligned_cols=191 Identities=18% Similarity=0.186 Sum_probs=120.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ +. .+..++.+|+++.+++.++++.. ++|+
T Consensus 13 tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~---------~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 13 TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAA---------DE-VGGLFVPTDVTDEDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---------HH-cCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999765421110 00 12367899999999998888742 6899
Q ss_pred EEEcccCCh----------------------hcH----HHHHHhCC--CCCcEEEeeccc-cccCCCCCCCCCCCCCCCC
Q 022578 76 VYDINGREA----------------------DEV----EPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 76 vi~~a~~~~----------------------~~~----~~ll~~~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~p~ 126 (295)
|||++|... .++ +.++..+. +..++|++||.. +++... ...
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~----------~~~ 152 (255)
T PRK06057 83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT----------SQI 152 (255)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC----------CCc
Confidence 999997521 011 22333332 456899998854 443211 122
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.|..+|+..+.+.+ ..++++++++||.+.++.....+... .....+ ....++ . ..+..++|+++++
T Consensus 153 ~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~-~~~~~~-~----~~~~~~~~~a~~~ 225 (255)
T PRK06057 153 SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD-PERAAR-RLVHVP-M----GRFAEPEEIAAAV 225 (255)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC-HHHHHH-HHhcCC-C----CCCcCHHHHHHHH
Confidence 35588876655542 35899999999999887432111000 000000 000111 1 1468899999999
Q ss_pred HHHhcCC--CCCCceEEecCC
Q 022578 200 VQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~ 218 (295)
..++.+. ...|..+.+.++
T Consensus 226 ~~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 226 AFLASDDASFITASTFLVDGG 246 (255)
T ss_pred HHHhCccccCccCcEEEECCC
Confidence 9888653 234667777665
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.9e-13 Score=109.83 Aligned_cols=195 Identities=16% Similarity=0.149 Sum_probs=127.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++...... ..+.+...++.++.+|+++.+++..++++. .+|+
T Consensus 13 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 87 (253)
T PRK06172 13 TGGAAGIGRATALAFAREGAKVVVADRDAAGGEETV-----ALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY 87 (253)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 699999999999999999999999999876532111 112222356889999999999888877642 6799
Q ss_pred EEEcccCCh---------------------hcHH----HHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGREA---------------------DEVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~~---------------------~~~~----~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||++|... .+.. .++..+. +..++|++||...+..... ...|
T Consensus 88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------~~~Y 157 (253)
T PRK06172 88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK----------MSIY 157 (253)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC----------Cchh
Confidence 999998521 1122 2233332 4568999999876543211 1224
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch--HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|+..+.+.+ ..++++..+.||.+-.+...... ............+ ...+..++|+++.+
T Consensus 158 ~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~ia~~~ 228 (253)
T PRK06172 158 AASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP---------VGRIGKVEEVASAV 228 (253)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC---------CCCccCHHHHHHHH
Confidence 489998887763 25799999999988766321100 0111111111111 11246799999999
Q ss_pred HHHhcCC--CCCCceEEecCCc
Q 022578 200 VQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+.++.+. ...|+.+.+.++.
T Consensus 229 ~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 229 LYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred HHHhCccccCcCCcEEEECCCc
Confidence 9998753 3467788887764
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-12 Score=108.97 Aligned_cols=196 Identities=18% Similarity=0.242 Sum_probs=122.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---------
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--------- 70 (295)
|||+|+||.+++++|++.|++|.+..+ +....... ..++......+..+.+|+++.+++..++++
T Consensus 10 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK12747 10 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET-----VYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT 84 (252)
T ss_pred eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH-----HHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence 799999999999999999999998754 33321111 011112224567889999998777655532
Q ss_pred --CCCcEEEEcccCC--------------------hhcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 71 --KGFDVVYDINGRE--------------------ADEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 71 --~~~d~vi~~a~~~--------------------~~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
..+|++||+||.. ..++..++++ +....++|++||...+.... .
T Consensus 85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------~ 154 (252)
T PRK12747 85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP----------D 154 (252)
T ss_pred CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC----------C
Confidence 1699999999852 2223333333 33346999999987643211 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
...|..+|+..+.+.+ ..++++..+.||.+.++...............+. . .....+.+++|+|+
T Consensus 155 ~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~dva~ 226 (252)
T PRK12747 155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATT--I------SAFNRLGEVEDIAD 226 (252)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHh--c------CcccCCCCHHHHHH
Confidence 1235599999887763 3589999999999988742110000001111000 0 01124578999999
Q ss_pred HHHHHhcCCC--CCCceEEecCCc
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
++..++.... ..|..+.+.++.
T Consensus 227 ~~~~l~s~~~~~~~G~~i~vdgg~ 250 (252)
T PRK12747 227 TAAFLASPDSRWVTGQLIDVSGGS 250 (252)
T ss_pred HHHHHcCccccCcCCcEEEecCCc
Confidence 9999886532 357778777653
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-12 Score=107.63 Aligned_cols=195 Identities=18% Similarity=0.250 Sum_probs=122.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||+.++++|+++|++|+++.+......... ..++......+..+.+|++|.+++..++++ .++|+
T Consensus 9 tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 84 (246)
T PRK12938 9 TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKW----LEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDV 84 (246)
T ss_pred ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999988654322211000 011112234577889999999988887753 26899
Q ss_pred EEEcccCCh--------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|... .+ ++.+++.+. +..++|++||....... .....|.
T Consensus 85 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~y~ 154 (246)
T PRK12938 85 LVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----------FGQTNYS 154 (246)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC----------CCChhHH
Confidence 999998621 12 233444443 55799999986542111 1112344
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..++++..++||.+.+|.... .....+..+....+ ...+..++|++.+++.+
T Consensus 155 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~l 224 (246)
T PRK12938 155 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIP---------VRRLGSPDEIGSIVAWL 224 (246)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCC---------ccCCcCHHHHHHHHHHH
Confidence 88887776542 358999999999998874321 11222222222211 12235689999999998
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+.++ ...|+.+.+.++.
T Consensus 225 ~~~~~~~~~g~~~~~~~g~ 243 (246)
T PRK12938 225 ASEESGFSTGADFSLNGGL 243 (246)
T ss_pred cCcccCCccCcEEEECCcc
Confidence 8653 3457778777653
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.7e-13 Score=110.53 Aligned_cols=171 Identities=15% Similarity=0.164 Sum_probs=116.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hccCCeEEEEecCCChHHHHHhhhcC--CCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi 77 (295)
|||+|+||.+++++|+++|++|++++|+++....... .+. ....+++++.+|+++.+++.+++++. .+|++|
T Consensus 7 tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 7 IGATSDIARACARRYAAAGARLYLAARDVERLERLAD-----DLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-----HHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 7999999999999999999999999998765321110 111 11247899999999999988877642 579999
Q ss_pred EcccC--------------------ChhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 78 DINGR--------------------EADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 78 ~~a~~--------------------~~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
|++|. |..++.+++++ +. +..++|++||....... .....|..+
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~~s 151 (243)
T PRK07102 82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR----------ASNYVYGSA 151 (243)
T ss_pred ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC----------CCCcccHHH
Confidence 99875 12233344444 32 56789999986532111 112235588
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|+..+.+.+ ..++++..++||.+.++... + ...++ ..+++++|+++.++..+.
T Consensus 152 K~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~-------------~--~~~~~-----~~~~~~~~~a~~i~~~~~ 211 (243)
T PRK07102 152 KAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA-------------G--LKLPG-----PLTAQPEEVAKDIFRAIE 211 (243)
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh-------------c--cCCCc-----cccCCHHHHHHHHHHHHh
Confidence 988776653 45899999999998886210 0 01111 124679999999999988
Q ss_pred CC
Q 022578 205 NE 206 (295)
Q Consensus 205 ~~ 206 (295)
++
T Consensus 212 ~~ 213 (243)
T PRK07102 212 KG 213 (243)
T ss_pred CC
Confidence 64
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-12 Score=103.66 Aligned_cols=178 Identities=16% Similarity=0.108 Sum_probs=120.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-CCeEEEEecCCChHHHHHhhhc----C-CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA----K-GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~----~-~~d 74 (295)
||||+.||.++++.|.+.|++|++..|+.+...+... ++. ..+.....|++|.++++.+++. + ++|
T Consensus 12 TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~--------~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 12 TGASSGIGEATARALAEAGAKVVLAARREERLEALAD--------EIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred ecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHH--------hhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 7999999999999999999999999999987432221 111 3688999999999886555542 2 699
Q ss_pred EEEEcccC--------------------ChhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGR--------------------EADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~--------------------~~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||.||. |..++.+...+ +. +..++|.+||++-.-. .+....|
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~----------y~~~~vY 153 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP----------YPGGAVY 153 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc----------CCCCccc
Confidence 99999997 34455454444 33 5569999999874111 1111234
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCC-chH--HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYN-PVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..+|+....+. ...+++++.+-||.+-.-.... .+- ..-..... ....++..+|+|++
T Consensus 154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y------------~~~~~l~p~dIA~~ 221 (246)
T COG4221 154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY------------KGGTALTPEDIAEA 221 (246)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh------------ccCCCCCHHHHHHH
Confidence 58888876654 2368999999999885432100 000 00000000 12355889999999
Q ss_pred HHHHhcCCCC
Q 022578 199 FVQVLGNEKA 208 (295)
Q Consensus 199 i~~~~~~~~~ 208 (295)
+..++..|..
T Consensus 222 V~~~~~~P~~ 231 (246)
T COG4221 222 VLFAATQPQH 231 (246)
T ss_pred HHHHHhCCCc
Confidence 9999998765
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-12 Score=108.58 Aligned_cols=193 Identities=13% Similarity=0.137 Sum_probs=125.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ .++.+....+.++.+|+.+.+++..++++. .+|+
T Consensus 14 tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 88 (252)
T PRK07035 14 TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVA-----DAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI 88 (252)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999765422111 111222245788999999998888776642 5899
Q ss_pred EEEcccCC---------------------hhcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCC-c
Q 022578 76 VYDINGRE---------------------ADEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S 127 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~ 127 (295)
+||+++.. ..+...++ +.+. +..++|++||...+... .+. .
T Consensus 89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~ 157 (252)
T PRK07035 89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPG-----------DFQGI 157 (252)
T ss_pred EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCC-----------CCCcc
Confidence 99999842 11233333 3333 55799999986543211 122 2
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|+.++.+++ ..|++++.+.||.+..+...... ............+ ...+..++|+|+++
T Consensus 158 Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~ 228 (252)
T PRK07035 158 YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP---------LRRHAEPSEMAGAV 228 (252)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC---------CCCcCCHHHHHHHH
Confidence 4599999988764 34899999999998765321100 0111222211111 11345689999999
Q ss_pred HHHhcCCC--CCCceEEecCC
Q 022578 200 VQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~ 218 (295)
..++.+.. ..|+.+.+.++
T Consensus 229 ~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 229 LYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred HHHhCccccCccCCEEEeCCC
Confidence 99987642 35777777665
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.4e-13 Score=109.84 Aligned_cols=177 Identities=16% Similarity=0.100 Sum_probs=115.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc------CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d 74 (295)
|||+|+||..++++|+++|++|++++|+++....... .....+++++.+|+++.+++.++++. .++|
T Consensus 7 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 7 TGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAA-------ELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------HhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 7999999999999999999999999998765221100 00024688999999999988887763 2679
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+|||++|.. ..++.++++++ + +..++|++||...+.+.. ....|
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y 149 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP----------GLAVY 149 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC----------Cchhh
Confidence 999999862 22334444443 3 467899999975432211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|+..+.+.+ ..++++++++||.+..+.............. ......+..+|+|++++.
T Consensus 150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~------------~~~~~~~~~~~va~~~~~ 217 (260)
T PRK08267 150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGST------------KRLGVRLTPEDVAEAVWA 217 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhH------------hhccCCCCHHHHHHHHHH
Confidence 588888776653 3579999999999876532110000000000 001113567999999999
Q ss_pred HhcCC
Q 022578 202 VLGNE 206 (295)
Q Consensus 202 ~~~~~ 206 (295)
++..+
T Consensus 218 ~~~~~ 222 (260)
T PRK08267 218 AVQHP 222 (260)
T ss_pred HHhCC
Confidence 98653
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.47 E-value=2e-12 Score=106.52 Aligned_cols=195 Identities=20% Similarity=0.259 Sum_probs=123.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.|+........ ...+.....++.++.+|+++++++.++++. ..+|+
T Consensus 6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (242)
T TIGR01829 6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAW----LQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV 81 (242)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence 799999999999999999999999988322211100 001111124688999999999888777753 25899
Q ss_pred EEEcccCC--------------------hhcHHH----HHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..++.. ++..++ +.+++|++||.....+. .....|.
T Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------~~~~~y~ 151 (242)
T TIGR01829 82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ----------FGQTNYS 151 (242)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC----------CCcchhH
Confidence 99999752 122222 344444 56799999986543211 1122344
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+++ ..+++++.++||.+.++.... ....+........+. ..+...+|+++++..+
T Consensus 152 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l 221 (242)
T TIGR01829 152 AAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA-MREDVLNSIVAQIPV---------GRLGRPEEIAAAVAFL 221 (242)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc-cchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence 88886665542 358999999999998875321 112222222222221 1234578999999888
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+.++ ...|+.+.+.++.
T Consensus 222 ~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 222 ASEEAGYITGATLSINGGL 240 (242)
T ss_pred cCchhcCccCCEEEecCCc
Confidence 7653 2467888887764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-12 Score=109.51 Aligned_cols=198 Identities=13% Similarity=0.222 Sum_probs=128.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhc----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSA----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+..+..+.. .++.. ...++.++.+|++|++++..++++ ..+|+
T Consensus 14 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~ 88 (263)
T PRK08339 14 TASSKGIGFGVARVLARAGADVILLSRNEENLKKAR-----EKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDI 88 (263)
T ss_pred eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcE
Confidence 799999999999999999999999999865532111 01111 124688999999999998888764 25899
Q ss_pred EEEcccCCh--------------------h----cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|... . .++.++..++ +..++|++||...+.... ....|.
T Consensus 89 lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~----------~~~~y~ 158 (263)
T PRK08339 89 FFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP----------NIALSN 158 (263)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC----------cchhhH
Confidence 999998621 1 1444555554 557999999987542111 112244
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc----------hHHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (295)
.+|...+.+.+ ..|+++..+.||.+..+..... ..........+ ..+ ...+..+
T Consensus 159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-------~~r~~~p 229 (263)
T PRK08339 159 VVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAK--PIP-------LGRLGEP 229 (263)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhc--cCC-------cccCcCH
Confidence 78888776653 4689999999999876521000 00001111111 011 1234678
Q ss_pred HHHHHHHHHHhcCC--CCCCceEEecCCcccC
Q 022578 193 KDLARAFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 193 ~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
+|+|+++..++... ...|+.+.+.++..++
T Consensus 230 ~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 230 EEIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred HHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 99999999998753 2467788887775544
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=6e-12 Score=104.73 Aligned_cols=196 Identities=15% Similarity=0.100 Sum_probs=124.9
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCC--CC----CchhhhhccCCeEEEEecCCChHHHHHhhhc--
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-- 70 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~----~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-- 70 (295)
|||+| .||..++++|+++|++|++++|++.+...... .. ....+.....++.++.+|+++.+++..++++
T Consensus 11 tGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 90 (256)
T PRK12748 11 TGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVS 90 (256)
T ss_pred eCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 69985 69999999999999999999988432110000 00 0111122234689999999999988777764
Q ss_pred ---CCCcEEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCC
Q 022578 71 ---KGFDVVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETD 121 (295)
Q Consensus 71 ---~~~d~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~ 121 (295)
..+|+|||++|.. ..++..+++++ . +..++|++||...++...+
T Consensus 91 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------- 163 (256)
T PRK12748 91 ERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD------- 163 (256)
T ss_pred HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC-------
Confidence 2689999999752 22344455443 2 3468999999776532111
Q ss_pred CCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 122 ~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
-..|..+|+..+.+++ ..+++++.++||.+..+.... ......... .+. ..+..++|
T Consensus 164 ---~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~----~~~~~~~~~----~~~-----~~~~~~~~ 227 (256)
T PRK12748 164 ---ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE----ELKHHLVPK----FPQ-----GRVGEPVD 227 (256)
T ss_pred ---chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh----hHHHhhhcc----CCC-----CCCcCHHH
Confidence 1235589999988763 358999999999877653211 111111111 111 12345799
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+|+++..++... ...|..+++.++.
T Consensus 228 ~a~~~~~l~~~~~~~~~g~~~~~d~g~ 254 (256)
T PRK12748 228 AARLIAFLVSEEAKWITGQVIHSEGGF 254 (256)
T ss_pred HHHHHHHHhCcccccccCCEEEecCCc
Confidence 999999888753 2357788887653
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=109.70 Aligned_cols=198 Identities=17% Similarity=0.162 Sum_probs=125.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+ +...... .++.+...++.++.+|+++++++..++++ ..+|+
T Consensus 12 tGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 85 (272)
T PRK08589 12 TGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETV-----DKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV 85 (272)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence 7999999999999999999999999998 4322111 11122234688999999999888877764 25899
Q ss_pred EEEcccCChh---------------------c----HHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~~---------------------~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.... + ++.++..+. ...++|++||...+.... ....|.
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 155 (272)
T PRK08589 86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL----------YRSGYN 155 (272)
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC----------CCchHH
Confidence 9999986311 1 122333333 336999999977543211 123355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch---HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.+|+..+.+.+ ..|++++.+.||.+..+...... ...+............+ ...+..++|+|+++
T Consensus 156 asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~va~~~ 230 (272)
T PRK08589 156 AAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP-----LGRLGKPEEVAKLV 230 (272)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC-----CCCCcCHHHHHHHH
Confidence 89998887764 35799999999998876321100 00000001000000000 11246799999999
Q ss_pred HHHhcCC--CCCCceEEecCCc
Q 022578 200 VQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+.++.+. ...|+.+.+.++.
T Consensus 231 ~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 231 VFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred HHHcCchhcCcCCCEEEECCCc
Confidence 9998753 3367778887764
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.8e-13 Score=110.97 Aligned_cols=196 Identities=16% Similarity=0.193 Sum_probs=125.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||..++++|+++|++|++++|+++..... ...+.....++.++.+|+++++++..+++.. ++|+
T Consensus 15 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~ 89 (264)
T PRK07576 15 VGGTSGINLGIAQAFARAGANVAVASRSQEKVDAA-----VAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV 89 (264)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 69999999999999999999999999986653211 1112222346788999999999998887642 5899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGR--------------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+++. |..++.++++++. ...++|++||...+... .....|..
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~----------~~~~~Y~a 159 (264)
T PRK07576 90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM----------PMQAHVCA 159 (264)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC----------CCccHHHH
Confidence 9999863 2334455555432 33599999997653211 11122448
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCC-CCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
+|...+.+++ ..+++++.++||.+.+.. ............... ...+ ...+..++|+|++++.+
T Consensus 160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~dva~~~~~l 231 (264)
T PRK07576 160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVA-QSVP-------LKRNGTKQDIANAALFL 231 (264)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHH-hcCC-------CCCCCCHHHHHHHHHHH
Confidence 9998888764 257899999999887532 100000000000000 1111 12346789999999999
Q ss_pred hcCCC--CCCceEEecCCc
Q 022578 203 LGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~ 219 (295)
+..+. ..|..+.+.++.
T Consensus 232 ~~~~~~~~~G~~~~~~gg~ 250 (264)
T PRK07576 232 ASDMASYITGVVLPVDGGW 250 (264)
T ss_pred cChhhcCccCCEEEECCCc
Confidence 97532 356677777764
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.8e-12 Score=106.28 Aligned_cols=194 Identities=13% Similarity=0.126 Sum_probs=124.6
Q ss_pred CCcCC-cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-cc-CCeEEEEecCCChHHHHHhhhc-----CC
Q 022578 1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FS-SKILHLKGDRKDYDFVKSSLSA-----KG 72 (295)
Q Consensus 1 tGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~-~~v~~~~~D~~~~~~~~~~~~~-----~~ 72 (295)
|||+| -||..+++.|+++|++|++++|+..+..... ..+.+ .. .++.++.+|+++++++.++++. ..
T Consensus 23 tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 97 (262)
T PRK07831 23 TAAAGTGIGSATARRALEEGARVVISDIHERRLGETA-----DELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR 97 (262)
T ss_pred ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 69997 6999999999999999999998765422111 01111 11 3588899999999988887764 26
Q ss_pred CcEEEEcccCC--------------------hhcHHHHHHh----CC--C-CCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGRE--------------------ADEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 73 ~d~vi~~a~~~--------------------~~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+|++||++|.. ..+...++++ +. + ..++|++||...+... ...
T Consensus 98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------~~~ 167 (262)
T PRK07831 98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ----------HGQ 167 (262)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----------CCC
Confidence 89999999852 1122223333 22 2 4688888876543111 111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..|..+|+..+.+.+ .+++++..++||.+..+.............+....++ ..+..++|+|++
T Consensus 168 ~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~va~~ 238 (262)
T PRK07831 168 AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF---------GRAAEPWEVANV 238 (262)
T ss_pred cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence 235589999888763 3689999999999998753211112222233222221 124568999999
Q ss_pred HHHHhcCCC--CCCceEEecCC
Q 022578 199 FVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~ 218 (295)
++.++.+.. ..|+.+.+.++
T Consensus 239 ~~~l~s~~~~~itG~~i~v~~~ 260 (262)
T PRK07831 239 IAFLASDYSSYLTGEVVSVSSQ 260 (262)
T ss_pred HHHHcCchhcCcCCceEEeCCC
Confidence 999887532 35667766553
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-12 Score=111.43 Aligned_cols=173 Identities=16% Similarity=0.163 Sum_probs=116.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.++++.|+++|++|++++|+.+...... .++.+....+.++.+|++|.+++.++++. .++|+
T Consensus 46 tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~ 120 (293)
T PRK05866 46 TGASSGIGEAAAEQFARRGATVVAVARREDLLDAVA-----DRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI 120 (293)
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865522110 11112224578899999999998888763 27899
Q ss_pred EEEcccCCh----------------------hcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGREA----------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~~----------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||++|... .+. +.++..+. +..++|++||.+++.... .....
T Consensus 121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------p~~~~ 191 (293)
T PRK05866 121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS---------PLFSV 191 (293)
T ss_pred EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC---------CCcch
Confidence 999998631 112 22233332 567999999976643210 11123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|+..+.+.+ ..+++++.++||.+-.+.... ... ..+ ...+..+++|+.++
T Consensus 192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~------------~~~----~~~---~~~~~pe~vA~~~~ 252 (293)
T PRK05866 192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP------------TKA----YDG---LPALTADEAAEWMV 252 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc------------ccc----ccC---CCCCCHHHHHHHHH
Confidence 5589998877653 358999999999766652110 000 000 12367999999999
Q ss_pred HHhcCC
Q 022578 201 QVLGNE 206 (295)
Q Consensus 201 ~~~~~~ 206 (295)
..+.++
T Consensus 253 ~~~~~~ 258 (293)
T PRK05866 253 TAARTR 258 (293)
T ss_pred HHHhcC
Confidence 998864
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.7e-12 Score=104.20 Aligned_cols=193 Identities=15% Similarity=0.153 Sum_probs=122.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.|......... ...+.....++.++.+|+++.+++..++++ ..+|+
T Consensus 4 tGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 4 TGASRGIGRAIANRLAADGFEICVHYHSGRSDAESV----VSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999887653311111 111122235688999999999988877763 25799
Q ss_pred EEEcccC--------------------ChhcHHHHHHhC-----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR--------------------EADEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|. |..++.++++++ + +..++|++||...+.+.. ....|
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y 149 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR----------GQVNY 149 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC----------CCcch
Confidence 9999875 222344555543 2 446899999965432211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|+..+.+.+ ..+++++.++||.+.++.... ... .........++ ..+...+|+++++..
T Consensus 150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~-~~~~~~~~~~~---------~~~~~~~~va~~~~~ 218 (239)
T TIGR01831 150 SAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VEH-DLDEALKTVPM---------NRMGQPAEVASLAGF 218 (239)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hhH-HHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence 578887765542 358999999999988774321 111 11111111111 123568999999999
Q ss_pred HhcCC--CCCCceEEecCC
Q 022578 202 VLGNE--KASRQVFNISGE 218 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~ 218 (295)
++.++ ...|....+.++
T Consensus 219 l~~~~~~~~~g~~~~~~gg 237 (239)
T TIGR01831 219 LMSDGASYVTRQVISVNGG 237 (239)
T ss_pred HcCchhcCccCCEEEecCC
Confidence 98753 234556666554
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.9e-12 Score=108.72 Aligned_cols=180 Identities=16% Similarity=0.179 Sum_probs=116.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCC--CCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||.+++++|+++|++|++++|+.+........ .....+.....++.++.+|+++++++.+++++. ++
T Consensus 12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 91 (273)
T PRK08278 12 TGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGI 91 (273)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 79999999999999999999999999986542211100 001112233356889999999999998887753 79
Q ss_pred cEEEEcccC--------------------ChhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCC-C
Q 022578 74 DVVYDINGR--------------------EADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-K 126 (295)
Q Consensus 74 d~vi~~a~~--------------------~~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~ 126 (295)
|+|||++|. |..++.++++++. +..++|++||...... ....+ .
T Consensus 92 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------~~~~~~~ 162 (273)
T PRK08278 92 DICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP---------KWFAPHT 162 (273)
T ss_pred CEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc---------cccCCcc
Confidence 999999986 2224455555543 3458888887542110 00012 2
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCe-eecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
.|..+|+..|.+++ ..+++++.+.|+. +-.+ ..+....+. .....+..++|+|++
T Consensus 163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~---------~~~~~~~~~--------~~~~~~~~p~~va~~ 225 (273)
T PRK08278 163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA---------AVRNLLGGD--------EAMRRSRTPEIMADA 225 (273)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH---------HHHhccccc--------ccccccCCHHHHHHH
Confidence 35599999998763 3579999999984 2222 111111111 111235678999999
Q ss_pred HHHHhcCC
Q 022578 199 FVQVLGNE 206 (295)
Q Consensus 199 i~~~~~~~ 206 (295)
++.++...
T Consensus 226 ~~~l~~~~ 233 (273)
T PRK08278 226 AYEILSRP 233 (273)
T ss_pred HHHHhcCc
Confidence 99998764
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.1e-12 Score=104.51 Aligned_cols=192 Identities=15% Similarity=0.113 Sum_probs=124.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|++.|++|++++|...... ...+.....++..+.+|++|.+++.+++++ ..+|+
T Consensus 16 tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 16 TGCDTGLGQGMALGLAEAGCDIVGINIVEPTET-------IEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEecCcchHHH-------HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999998876543210 011122224578899999999999888874 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|.. ..+..++++++ . + ..++|++||...+..... -..|
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y 158 (253)
T PRK08993 89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR----------VPSY 158 (253)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC----------Ccch
Confidence 99999862 22344444443 2 2 358999999877643211 1135
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|+..+.+.+ ..|+++..++||.+-.+...... .........+ .+ +. ..+..++|+|+.++
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~--~~--p~-----~r~~~p~eva~~~~ 229 (253)
T PRK08993 159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD--RI--PA-----GRWGLPSDLMGPVV 229 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh--cC--CC-----CCCcCHHHHHHHHH
Confidence 589998887653 35899999999999776321100 0001111111 11 11 12567899999999
Q ss_pred HHhcCC--CCCCceEEecCC
Q 022578 201 QVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~ 218 (295)
.++.+. ...|..+.+.++
T Consensus 230 ~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 230 FLASSASDYINGYTIAVDGG 249 (253)
T ss_pred HHhCccccCccCcEEEECCC
Confidence 998753 235666766654
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.8e-12 Score=105.73 Aligned_cols=198 Identities=19% Similarity=0.200 Sum_probs=122.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|++.|++|+++.|+........ ..+.....++.++.+|++|++++.+++++. .+|+
T Consensus 6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA-----KEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 699999999999999999999999998854421110 111222346889999999999988877542 5899
Q ss_pred EEEcccCCh--------------------hcHHH----HHHhCC---CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGREA--------------------DEVEP----ILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~~--------------------~~~~~----ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||+++... .++.. ++..+. ...++|++||.....+.+ ....|
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y 150 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP----------ILSAY 150 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC----------CCcch
Confidence 999998621 12222 333333 236899999865432211 12235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHc--CCCcc----cCCCCCceeeeeeHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIP----IPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~i~~~D~ 195 (295)
..+|...+.+.+ ..++.+.+++||.+..+... .+...... +.++. .+........+.+++|+
T Consensus 151 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (254)
T TIGR02415 151 SSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE-----EIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDV 225 (254)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh-----hhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHH
Confidence 588998887763 24789999999988665311 11110000 00000 00000011235788999
Q ss_pred HHHHHHHhcCCC--CCCceEEecCC
Q 022578 196 ARAFVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 196 a~~i~~~~~~~~--~~~~~~~i~~~ 218 (295)
++++..++.+.. ..|..+.+.++
T Consensus 226 a~~~~~l~~~~~~~~~g~~~~~d~g 250 (254)
T TIGR02415 226 AGLVSFLASEDSDYITGQSILVDGG 250 (254)
T ss_pred HHHHHhhcccccCCccCcEEEecCC
Confidence 999999998743 24656666554
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.7e-12 Score=105.97 Aligned_cols=188 Identities=16% Similarity=0.155 Sum_probs=122.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|++.... ..++.++.+|++|++++.++++. ..+|+
T Consensus 15 tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 80 (266)
T PRK06171 15 TGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG 80 (266)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998876521 13678899999999998887764 26899
Q ss_pred EEEcccCCh-----------------------------hcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCC
Q 022578 76 VYDINGREA-----------------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCET 120 (295)
Q Consensus 76 vi~~a~~~~-----------------------------~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~ 120 (295)
+||++|... .++..+++++. +..++|++||...+....
T Consensus 81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 153 (266)
T PRK06171 81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE------- 153 (266)
T ss_pred EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC-------
Confidence 999998521 12233343332 345899999977643211
Q ss_pred CCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeec-CCCCCchH-----------HHHHHHHHcCCCcccCC
Q 022578 121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYG-PLNYNPVE-----------EWFFHRLKAGRPIPIPG 181 (295)
Q Consensus 121 ~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g-~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 181 (295)
....|..+|...+.+.+ ..++++..++||.+.. +....... ..+..........+
T Consensus 154 ---~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--- 227 (266)
T PRK06171 154 ---GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP--- 227 (266)
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc---
Confidence 11234588998887763 3589999999998852 21110000 01111111100111
Q ss_pred CCCceeeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 022578 182 SGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 182 ~~~~~~~~i~~~D~a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
...+..++|+|+++..++.... ..|..+++.++.
T Consensus 228 ----~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~ 263 (266)
T PRK06171 228 ----LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK 263 (266)
T ss_pred ----CCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence 1234678999999999987532 357778877653
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.7e-12 Score=106.48 Aligned_cols=192 Identities=16% Similarity=0.145 Sum_probs=124.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|++....... .....++.++.+|+++.+++..+++.. .+|+
T Consensus 12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 12 TGGGSGIGRALVERFLAEGARVAVLERSAEKLASLR--------QRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999875532110 111245788999999998888777642 6899
Q ss_pred EEEcccCCh-------------------------hcHHHHHHh----CC-CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 76 VYDINGREA-------------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 76 vi~~a~~~~-------------------------~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+||++|... .+...++++ ++ ...++|++||...+....+ .
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------~ 153 (263)
T PRK06200 84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG----------G 153 (263)
T ss_pred EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC----------C
Confidence 999998521 112222333 33 3458999999876532211 1
Q ss_pred CccchhhHHHHHHhhh------cCCcEEEeccCeeecCCCCCc-h---------HHHHHHHHHcCCCcccCCCCCceeee
Q 022578 126 KSRHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-V---------EEWFFHRLKAGRPIPIPGSGIQVTQL 189 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~~------~~~~~~i~R~~~i~g~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
..|..+|...+.+.+. .++++..+.||.+..+..... . ........... . ....+
T Consensus 154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~r~ 224 (263)
T PRK06200 154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI--T-------PLQFA 224 (263)
T ss_pred chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC--C-------CCCCC
Confidence 2355999998877632 358999999999977632100 0 00011111111 1 11235
Q ss_pred eeHHHHHHHHHHHhcCC---CCCCceEEecCCc
Q 022578 190 GHVKDLARAFVQVLGNE---KASRQVFNISGEK 219 (295)
Q Consensus 190 i~~~D~a~~i~~~~~~~---~~~~~~~~i~~~~ 219 (295)
..++|+|++++.++.+. ...|..+.+.++.
T Consensus 225 ~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~ 257 (263)
T PRK06200 225 PQPEDHTGPYVLLASRRNSRALTGVVINADGGL 257 (263)
T ss_pred CCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence 67899999999998754 2367788887763
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.9e-12 Score=106.46 Aligned_cols=171 Identities=19% Similarity=0.149 Sum_probs=114.9
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCc-cccCCCCCCchhhhhcc-CCeEEEEecCCChHHHHHhhhc----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP-IAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~----~~~ 73 (295)
|||+|.||.+++++|+++| ++|++++|+++. ..... .++.... .+++++.+|+.|.+++.++++. .++
T Consensus 14 tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i 88 (253)
T PRK07904 14 LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAV-----AQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV 88 (253)
T ss_pred EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHH-----HHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence 7999999999999999995 999999998765 21110 1112211 3688999999998876655542 379
Q ss_pred cEEEEcccCChh--------------------c----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~~~--------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|++||++|.... + ++.+++.+. +..++|++||...+... .....
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~----------~~~~~ 158 (253)
T PRK07904 89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR----------RSNFV 158 (253)
T ss_pred CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC----------CCCcc
Confidence 999998876311 1 133555555 56899999997643211 11123
Q ss_pred cchhhHHHHHH-------hhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~-------~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|+....+ ++..++++++++||.+..+... ..... ...+..+|+|+.++
T Consensus 159 Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~------------~~~~~---------~~~~~~~~~A~~i~ 217 (253)
T PRK07904 159 YGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA------------HAKEA---------PLTVDKEDVAKLAV 217 (253)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc------------cCCCC---------CCCCCHHHHHHHHH
Confidence 55888877644 3457899999999998876210 00000 11367999999999
Q ss_pred HHhcCCC
Q 022578 201 QVLGNEK 207 (295)
Q Consensus 201 ~~~~~~~ 207 (295)
..+.++.
T Consensus 218 ~~~~~~~ 224 (253)
T PRK07904 218 TAVAKGK 224 (253)
T ss_pred HHHHcCC
Confidence 9998653
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.7e-12 Score=106.83 Aligned_cols=187 Identities=17% Similarity=0.217 Sum_probs=119.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||..+++.|+++|++|++++|++........ .+. ...+++++.+|+++++++..++++. .+|.
T Consensus 11 tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 84 (238)
T PRK05786 11 IGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKK-----TLS-KYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG 84 (238)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHH-hcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 6999999999999999999999999998765321100 001 1136889999999999888776531 4799
Q ss_pred EEEcccCCh------------------hcH----HHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCCC-ccchhh
Q 022578 76 VYDINGREA------------------DEV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGK 132 (295)
Q Consensus 76 vi~~a~~~~------------------~~~----~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~~~~~k 132 (295)
+||+++... .+. +.++..+....++|++||...... +..+. .|..+|
T Consensus 85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~~~~~~Y~~sK 154 (238)
T PRK05786 85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----------ASPDQLSYAVAK 154 (238)
T ss_pred EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----------CCCCchHHHHHH
Confidence 999987421 111 222222333357999998654111 11112 245888
Q ss_pred HHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 133 LNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 133 ~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
...+.++ ...+++++++||++++++..... ... . ....+ ..++..+|++++++.++..
T Consensus 155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~~~----~--~~~~~-----~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER----NWK----K--LRKLG-----DDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----hhh----h--hcccc-----CCCCCHHHHHHHHHHHhcc
Confidence 8777654 23589999999999998732110 000 0 00001 1346789999999999875
Q ss_pred CC--CCCceEEecCC
Q 022578 206 EK--ASRQVFNISGE 218 (295)
Q Consensus 206 ~~--~~~~~~~i~~~ 218 (295)
+. ..|..+.+.++
T Consensus 220 ~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 220 EADWVDGVVIPVDGG 234 (238)
T ss_pred cccCccCCEEEECCc
Confidence 33 35666666554
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.5e-12 Score=101.40 Aligned_cols=200 Identities=20% Similarity=0.269 Sum_probs=138.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
.|+.||.|+++++.....++.|-.+.|+..+.. + ..+...+.++.+|....+-+...+. ++..++.++
T Consensus 58 lggnpfsgs~vlk~A~~vv~svgilsen~~k~~--l--------~sw~~~vswh~gnsfssn~~k~~l~--g~t~v~e~~ 125 (283)
T KOG4288|consen 58 LGGNPFSGSEVLKNATNVVHSVGILSENENKQT--L--------SSWPTYVSWHRGNSFSSNPNKLKLS--GPTFVYEMM 125 (283)
T ss_pred hcCCCcchHHHHHHHHhhceeeeEeecccCcch--h--------hCCCcccchhhccccccCcchhhhc--CCcccHHHh
Confidence 388999999999999999999999999976411 1 2223568888898877666677777 888888876
Q ss_pred cC----------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHh-hhcCCcEE
Q 022578 81 GR----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWT 147 (295)
Q Consensus 81 ~~----------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~-~~~~~~~~ 147 (295)
+. |-+...+.+.+++ ++++|+|+|... ||- .+..|..|+.+|.++|..+ +.++.+-+
T Consensus 126 ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~---------~~~i~rGY~~gKR~AE~Ell~~~~~rgi 195 (283)
T KOG4288|consen 126 GGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL---------PPLIPRGYIEGKREAEAELLKKFRFRGI 195 (283)
T ss_pred cCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC---------CCccchhhhccchHHHHHHHHhcCCCce
Confidence 64 3334555556655 999999999643 221 1334566889999999876 56789999
Q ss_pred EeccCeeecCCCCCch------HHHHHHHHHcCCC--c-ccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCC
Q 022578 148 SLRPVYIYGPLNYNPV------EEWFFHRLKAGRP--I-PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218 (295)
Q Consensus 148 i~R~~~i~g~~~~~~~------~~~~~~~~~~~~~--~-~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~ 218 (295)
|+|||.+||-+...+. ....+.+..+... . .++--+.....++.++++|.+.+.++.+++..| +
T Consensus 196 ilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~G-v------ 268 (283)
T KOG4288|consen 196 ILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKG-V------ 268 (283)
T ss_pred eeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCc-e------
Confidence 9999999997542211 1112233322221 1 122234477889999999999999999886543 3
Q ss_pred cccCHHHHHHHHH
Q 022578 219 KYVTFDGLARACA 231 (295)
Q Consensus 219 ~~~t~~e~~~~i~ 231 (295)
+++.++.++-.
T Consensus 269 --v~i~eI~~~a~ 279 (283)
T KOG4288|consen 269 --VTIEEIKKAAH 279 (283)
T ss_pred --eeHHHHHHHHH
Confidence 45556555443
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.8e-12 Score=106.13 Aligned_cols=170 Identities=18% Similarity=0.178 Sum_probs=115.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||.+++++|+++|++|++++|++....... ..+... ..++.++.+|+++.+++.+++++. ++
T Consensus 8 tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (248)
T PRK08251 8 TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELK-----AELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL 82 (248)
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999876532111 011111 236888999999999888777642 69
Q ss_pred cEEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCC-C
Q 022578 74 DVVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-K 126 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~ 126 (295)
|+|||++|.. ..+..+++++ ++ +..++|++||...+.+.. .+ .
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~ 152 (248)
T PRK08251 83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP----------GVKA 152 (248)
T ss_pred CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC----------CCcc
Confidence 9999999852 1223333333 32 567999999966432211 11 2
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.|..+|+..+.+.+ ..+++++.++||++.++... . .+ . ....++.+|.|+.+
T Consensus 153 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~---------~--~~-------~---~~~~~~~~~~a~~i 211 (248)
T PRK08251 153 AYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA---------K--AK-------S---TPFMVDTETGVKAL 211 (248)
T ss_pred cHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh---------c--cc-------c---CCccCCHHHHHHHH
Confidence 35589998876652 24789999999998776210 0 00 0 11247789999999
Q ss_pred HHHhcCC
Q 022578 200 VQVLGNE 206 (295)
Q Consensus 200 ~~~~~~~ 206 (295)
+..++.+
T Consensus 212 ~~~~~~~ 218 (248)
T PRK08251 212 VKAIEKE 218 (248)
T ss_pred HHHHhcC
Confidence 9999864
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.6e-12 Score=105.07 Aligned_cols=187 Identities=13% Similarity=0.093 Sum_probs=116.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC---------
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--------- 71 (295)
|||+|+||+.++++|+++|++|++++|.+.+....+. .....+++++.+|+++++++.+++++.
T Consensus 7 tGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 7 TGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA-------EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV 79 (251)
T ss_pred ecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH-------hccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence 7999999999999999999999999998633111110 111246889999999999998888642
Q ss_pred CCcEEEEcccC---------------------Chhc----HHHHHHhCC---CCCcEEEeeccccccCCCCCCCCCCCCC
Q 022578 72 GFDVVYDINGR---------------------EADE----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (295)
Q Consensus 72 ~~d~vi~~a~~---------------------~~~~----~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~ 123 (295)
+..++||++|. |..+ .+.++..+. +.+++|++||...+.. .
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~ 148 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP-----------Y 148 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC-----------C
Confidence 12278888765 1222 334444443 2458999999765321 1
Q ss_pred CCC-ccchhhHHHHHHhh---------hcCCcEEEeccCeeecCCCCC------chHHHHHHHHHcCCCcccCCCCCcee
Q 022578 124 DPK-SRHKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVT 187 (295)
Q Consensus 124 ~p~-~~~~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (295)
.+. .|..+|+..+.+.+ ..++++..++||.+-.+.... .... ........ . . ..
T Consensus 149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~----~-~----~~ 218 (251)
T PRK06924 149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFT-NLDRFITL----K-E----EG 218 (251)
T ss_pred CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccch-HHHHHHHH----h-h----cC
Confidence 122 24589998888763 246889999999876652100 0000 00000000 0 0 11
Q ss_pred eeeeHHHHHHHHHHHhcC-CCCCCceEEe
Q 022578 188 QLGHVKDLARAFVQVLGN-EKASRQVFNI 215 (295)
Q Consensus 188 ~~i~~~D~a~~i~~~~~~-~~~~~~~~~i 215 (295)
.+..++|+|+.++.++.+ ....|+.+.+
T Consensus 219 ~~~~~~dva~~~~~l~~~~~~~~G~~~~v 247 (251)
T PRK06924 219 KLLSPEYVAKALRNLLETEDFPNGEVIDI 247 (251)
T ss_pred CcCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence 247899999999999886 3334555444
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-12 Score=104.82 Aligned_cols=196 Identities=14% Similarity=0.117 Sum_probs=122.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||++.||.+++++|+++|++|+++.|+......... ..+. ....++.++.+|++|++++.+++++ ..+|
T Consensus 14 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 89 (260)
T PRK08416 14 SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIA----EDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD 89 (260)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence 7999999999999999999999988765432111110 0111 1124688999999999988887764 2689
Q ss_pred EEEEcccCC---------------hhc---------------HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCC
Q 022578 75 VVYDINGRE---------------ADE---------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (295)
Q Consensus 75 ~vi~~a~~~---------------~~~---------------~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~ 122 (295)
++||+||.. .+. ++.++..+. +..++|++||...+...
T Consensus 90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 159 (260)
T PRK08416 90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI---------- 159 (260)
T ss_pred EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC----------
Confidence 999999631 011 223344444 45699999997542111
Q ss_pred CCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 123 ~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
.....|..+|+..+.+.+ ..|+++..+.||.+-.+..... .............+ ...+..++|
T Consensus 160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~~ 230 (260)
T PRK08416 160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSP---------LNRMGQPED 230 (260)
T ss_pred CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCC---------CCCCCCHHH
Confidence 111235589999888763 3589999999998765521100 00111111111111 112467999
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+|++++.++... ...|+.+.+.++.
T Consensus 231 va~~~~~l~~~~~~~~~G~~i~vdgg~ 257 (260)
T PRK08416 231 LAGACLFLCSEKASWLTGQTIVVDGGT 257 (260)
T ss_pred HHHHHHHHcChhhhcccCcEEEEcCCe
Confidence 999999998753 2356777776653
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.8e-13 Score=111.56 Aligned_cols=137 Identities=18% Similarity=0.125 Sum_probs=98.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||+++++.|+++|++|++++|+....... . ..+++++.+|+++.+++.++++.. ++|+
T Consensus 7 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~---------~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 7 TGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL---------A--AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------H--HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999987552211 1 135788999999999988877543 7899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
|||++|.. ..++.+++++ ++ +..++|++||...+.... ....|..
T Consensus 76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~~ 145 (274)
T PRK05693 76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP----------FAGAYCA 145 (274)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC----------CccHHHH
Confidence 99999852 1233334444 33 456899999865432111 1123558
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCC
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~ 158 (295)
+|...+.+.+ ..|++++.++||.+..+.
T Consensus 146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 8988777642 368999999999997763
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-12 Score=106.20 Aligned_cols=178 Identities=17% Similarity=0.149 Sum_probs=122.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
||||+.||..+++.|.++|++|+++.|+.++..+... ++... .-.++++.+|+++++++..+... ..+|
T Consensus 12 TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~-----~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Id 86 (265)
T COG0300 12 TGASSGIGAELAKQLARRGYNLILVARREDKLEALAK-----ELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPID 86 (265)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH-----HHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCccc
Confidence 7999999999999999999999999999987433221 12211 23578999999999888887753 3799
Q ss_pred EEEEcccCCh--------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||... .+ ++.++..+. +..++|.++|...|-.. +....|
T Consensus 87 vLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~----------p~~avY 156 (265)
T COG0300 87 VLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT----------PYMAVY 156 (265)
T ss_pred EEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC----------cchHHH
Confidence 9999999732 11 333333333 66799999998875321 112235
Q ss_pred chhhHHHHHH-------hhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~-------~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
+.+|+..-.+ ++..|+.++.+.||.+...... .++..... .....-+++.+|+|+..+.
T Consensus 157 ~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-----------~~~~~~~~---~~~~~~~~~~~~va~~~~~ 222 (265)
T COG0300 157 SATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-----------AKGSDVYL---LSPGELVLSPEDVAEAALK 222 (265)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-----------cccccccc---ccchhhccCHHHHHHHHHH
Confidence 5888876433 3567899999999987776321 01111111 0112456889999999999
Q ss_pred HhcCCC
Q 022578 202 VLGNEK 207 (295)
Q Consensus 202 ~~~~~~ 207 (295)
.+...+
T Consensus 223 ~l~~~k 228 (265)
T COG0300 223 ALEKGK 228 (265)
T ss_pred HHhcCC
Confidence 998743
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-12 Score=113.00 Aligned_cols=152 Identities=16% Similarity=0.173 Sum_probs=99.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+..+...... .+.....++.++.+|+++.+++..+++. ..+|+
T Consensus 12 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~ 86 (322)
T PRK07453 12 TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQ-----ELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA 86 (322)
T ss_pred EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence 7999999999999999999999999998655321110 0111123688999999999999888764 25999
Q ss_pred EEEcccCC---------------------hhcHHHHH----HhCC--C--CCcEEEeeccccccCC-CC---CCC--C--
Q 022578 76 VYDINGRE---------------------ADEVEPIL----DALP--N--LEQFIYCSSAGVYLKS-DL---LPH--C-- 118 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll----~~~~--~--~~~~i~~Ss~~v~~~~-~~---~~~--~-- 118 (295)
|||+||.. ..++.+++ ..++ + ..|+|++||...+... .+ .+. +
T Consensus 87 li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~ 166 (322)
T PRK07453 87 LVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLG 166 (322)
T ss_pred EEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchh
Confidence 99999841 11222333 3333 2 3599999997764321 00 000 0
Q ss_pred ----------------CCCCCCCCc-cchhhHHHHHHh----hh----cCCcEEEeccCeeecC
Q 022578 119 ----------------ETDTVDPKS-RHKGKLNTESVL----ES----KGVNWTSLRPVYIYGP 157 (295)
Q Consensus 119 ----------------e~~~~~p~~-~~~~k~~~E~~~----~~----~~~~~~i~R~~~i~g~ 157 (295)
+..+..|.. |..+|++.+.+. +. .|++++.++||.+++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 167 DLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred hhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 111223333 449998765543 22 4799999999999863
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3e-12 Score=110.12 Aligned_cols=179 Identities=16% Similarity=0.170 Sum_probs=118.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.+...+.. .++.+....+.++.+|++|.+++.++++. ..+|+
T Consensus 13 TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 87 (330)
T PRK06139 13 TGASSGIGQATAEAFARRGARLVLAARDEEALQAVA-----EECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV 87 (330)
T ss_pred cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999876532111 11222234677899999999999887753 27899
Q ss_pred EEEcccCC--------------------hhcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.. ..++.++. ..+. +..++|++||...+...+ ....|.
T Consensus 88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p----------~~~~Y~ 157 (330)
T PRK06139 88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP----------YAAAYS 157 (330)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC----------CchhHH
Confidence 99999852 11233333 3333 456899999877553211 112355
Q ss_pred hhhHHHHHHh-------hh-cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVL-------ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~-------~~-~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|...+.+. .. .+++++.+.||.+.+|...... ...+... .....+.+++|+|++++.
T Consensus 158 asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~-------~~~~~~~------~~~~~~~~pe~vA~~il~ 224 (330)
T PRK06139 158 ASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA-------NYTGRRL------TPPPPVYDPRRVAKAVVR 224 (330)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc-------ccccccc------cCCCCCCCHHHHHHHHHH
Confidence 8888755443 22 3799999999999887431100 0011111 011235789999999999
Q ss_pred HhcCCC
Q 022578 202 VLGNEK 207 (295)
Q Consensus 202 ~~~~~~ 207 (295)
++.++.
T Consensus 225 ~~~~~~ 230 (330)
T PRK06139 225 LADRPR 230 (330)
T ss_pred HHhCCC
Confidence 998754
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.8e-12 Score=115.51 Aligned_cols=192 Identities=16% Similarity=0.210 Sum_probs=127.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|++....... .....++..+.+|++|++++..+++. ..+|+
T Consensus 275 tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 275 TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLA--------EALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999865532111 11124567789999999998887764 25899
Q ss_pred EEEcccCC---------------------hhcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE---------------------ADEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+||.. ..++.+++++ +.+..++|++||...+.... ....|..
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~a 416 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP----------PRNAYCA 416 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC----------CCchhHH
Confidence 99999852 1223333333 33446899999977643211 1123558
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch--HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
+|+..+.+.+ ..|++++.+.||.+.++...... .......+.+..+. ..+..++|+|++++.
T Consensus 417 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dia~~~~~ 487 (520)
T PRK06484 417 SKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL---------GRLGDPEEVAEAIAF 487 (520)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence 9999887763 35799999999999887321100 00011112111111 123678999999999
Q ss_pred HhcCC--CCCCceEEecCCc
Q 022578 202 VLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~ 219 (295)
++... ...|+.+.+.++.
T Consensus 488 l~s~~~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 488 LASPAASYVNGATLTVDGGW 507 (520)
T ss_pred HhCccccCccCcEEEECCCc
Confidence 98753 2467788887764
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-12 Score=108.91 Aligned_cols=183 Identities=22% Similarity=0.221 Sum_probs=118.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||..+++.|.++|++|++++|+.+....... .+. ....+..+.+|++|.+++.+++++ ..+|+
T Consensus 15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~-----~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 88 (296)
T PRK05872 15 TGAARGIGAELARRLHARGAKLALVDLEEAELAALAA-----ELG-GDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV 88 (296)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hhc-CCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998765321110 000 013456677999999988887754 26899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
|||++|.. ..+..++++++ . ...++|++||...+..... ...|..
T Consensus 89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~a 158 (296)
T PRK05872 89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG----------MAAYCA 158 (296)
T ss_pred EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC----------chHHHH
Confidence 99999862 22333344443 2 4468999999876533211 123558
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHH-HHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
+|+..+.+.+ ..|+.+..+.||.+..+........ .....+....+.+ ...++.++|+|++++.+
T Consensus 159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~va~~i~~~ 231 (296)
T PRK05872 159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWP-------LRRTTSVEKCAAAFVDG 231 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCc-------ccCCCCHHHHHHHHHHH
Confidence 9998887763 4689999999999877632110000 1111111111111 12346799999999999
Q ss_pred hcCC
Q 022578 203 LGNE 206 (295)
Q Consensus 203 ~~~~ 206 (295)
+.+.
T Consensus 232 ~~~~ 235 (296)
T PRK05872 232 IERR 235 (296)
T ss_pred HhcC
Confidence 8764
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-11 Score=102.43 Aligned_cols=195 Identities=16% Similarity=0.163 Sum_probs=122.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.++++.|+++|++|+++.|+........ ...+.....++.++.+|++|.+++.++++. ..+|+
T Consensus 13 tGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 88 (261)
T PRK08936 13 TGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDV----AEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV 88 (261)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999998888653311110 011111224677899999999988877763 26899
Q ss_pred EEEcccCChh--------------------c----HHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCC-c
Q 022578 76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S 127 (295)
Q Consensus 76 vi~~a~~~~~--------------------~----~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~ 127 (295)
+||+++.... + ++.+++.+. + ..++|++||...+. +..+. .
T Consensus 89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~ 157 (261)
T PRK08936 89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----------PWPLFVH 157 (261)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----------CCCCCcc
Confidence 9999986211 1 223344443 2 36899999865321 11122 3
Q ss_pred cchhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|...+.+. ...+++++.++||.+..+.....+ ............+ ...+...+|+++++
T Consensus 158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~ 228 (261)
T PRK08936 158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP---------MGYIGKPEEIAAVA 228 (261)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence 458887766554 235899999999999887432111 1111111111111 11356689999999
Q ss_pred HHHhcCC--CCCCceEEecCCc
Q 022578 200 VQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~ 219 (295)
..++... ...|..+.+.++.
T Consensus 229 ~~l~s~~~~~~~G~~i~~d~g~ 250 (261)
T PRK08936 229 AWLASSEASYVTGITLFADGGM 250 (261)
T ss_pred HHHcCcccCCccCcEEEECCCc
Confidence 9988753 2356667666653
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.2e-12 Score=110.28 Aligned_cols=153 Identities=15% Similarity=0.073 Sum_probs=101.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||.+++++|+++|++|++++|+.+...... ..+... ..++.++.+|++|.+++.+++++. ++
T Consensus 22 tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 96 (306)
T PRK06197 22 TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAA-----ARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI 96 (306)
T ss_pred cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence 799999999999999999999999999865522110 011111 235889999999999988877642 68
Q ss_pred cEEEEcccCC------------------hhc----HHHHHHhCC--CCCcEEEeecccccc--CCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGRE------------------ADE----VEPILDALP--NLEQFIYCSSAGVYL--KSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~--~~~~~~~~e~~~~~p~~ 127 (295)
|+|||+||.. ..+ ++.+++.++ +..++|++||...+. ........+..+..+..
T Consensus 97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~ 176 (306)
T PRK06197 97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVA 176 (306)
T ss_pred CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHH
Confidence 9999999851 122 555666665 567999999986543 11111111111222333
Q ss_pred -cchhhHHHHHHhh-------hcCCcEEE--eccCeeecCC
Q 022578 128 -RHKGKLNTESVLE-------SKGVNWTS--LRPVYIYGPL 158 (295)
Q Consensus 128 -~~~~k~~~E~~~~-------~~~~~~~i--~R~~~i~g~~ 158 (295)
|..+|+..+.+.+ ..++++.+ +.||.+..+.
T Consensus 177 ~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 177 AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 4499998887663 24555544 4799987764
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-11 Score=103.45 Aligned_cols=197 Identities=19% Similarity=0.203 Sum_probs=124.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc--CCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+|.||.+++++|+++|++|++++|++++..... ..+.+.. .++.++.+|++|.+++.+++++ ..+
T Consensus 14 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 88 (265)
T PRK07062 14 TGGSSGIGLATVELLLEAGASVAICGRDEERLASAE-----ARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV 88 (265)
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999999999999876532111 0111111 3577899999999988877653 268
Q ss_pred cEEEEcccCCh--------------------h----cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGREA--------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~~--------------------~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|++||++|... . .++.++..++ +..++|++||...+.... ....
T Consensus 89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~ 158 (265)
T PRK07062 89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP----------HMVA 158 (265)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC----------CchH
Confidence 99999998521 0 1334444454 457999999977542211 1122
Q ss_pred cchhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchH---------HHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 128 RHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVE---------EWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 128 ~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
|..+|+..+.+. ...|++++.++||.+..+.....+. ..+.........++ ...+..
T Consensus 159 y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~ 231 (265)
T PRK07062 159 TSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-------LGRLGR 231 (265)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------cCCCCC
Confidence 447787766554 2468999999999987763211000 00000000001111 123467
Q ss_pred HHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 192 VKDLARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++|+|++++.++.+. ...|+.+.+.++.
T Consensus 232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg~ 261 (265)
T PRK07062 232 PDEAARALFFLASPLSSYTTGSHIDVSGGF 261 (265)
T ss_pred HHHHHHHHHHHhCchhcccccceEEEcCce
Confidence 899999999988752 3467788887763
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.3e-12 Score=107.67 Aligned_cols=175 Identities=17% Similarity=0.141 Sum_probs=114.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----CCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v 76 (295)
|||+|+||..++++|+++|++|++++|+++....... ++ ....++.++.+|++|++++..+++. ..+|+|
T Consensus 11 tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l 84 (263)
T PRK09072 11 TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAA-----RL-PYPGRHRWVVADLTSEAGREAVLARAREMGGINVL 84 (263)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence 7999999999999999999999999998665321110 11 1124788999999999888777653 268999
Q ss_pred EEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 77 YDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 77 i~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
||++|.. ..++.++++++ . +..++|++||...+.+.. ....|..
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~~ 154 (263)
T PRK09072 85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP----------GYASYCA 154 (263)
T ss_pred EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC----------CccHHHH
Confidence 9999862 22344444443 2 346899998865432111 1223558
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|...+.+++ ..+++++.+.||.+..+... .. ..... .. ....+..++|+|++++.++
T Consensus 155 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~---------~~-~~~~~---~~--~~~~~~~~~~va~~i~~~~ 219 (263)
T PRK09072 155 SKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS---------EA-VQALN---RA--LGNAMDDPEDVAAAVLQAI 219 (263)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh---------hh-ccccc---cc--ccCCCCCHHHHHHHHHHHH
Confidence 8887766552 35789999999987665211 00 00000 00 0113467899999999999
Q ss_pred cCC
Q 022578 204 GNE 206 (295)
Q Consensus 204 ~~~ 206 (295)
..+
T Consensus 220 ~~~ 222 (263)
T PRK09072 220 EKE 222 (263)
T ss_pred hCC
Confidence 875
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.4e-12 Score=104.71 Aligned_cols=136 Identities=15% Similarity=0.120 Sum_probs=98.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---------C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------K 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---------~ 71 (295)
|||+|+||..++++|+++|++|++++|+..+.. . .....++.++.+|+++.+++..++.+ .
T Consensus 7 tGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 7 TGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A--------AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h--------hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 799999999999999999999999999865411 0 11124688999999999988885542 2
Q ss_pred CCcEEEEcccCCh---------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 72 GFDVVYDINGREA---------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 72 ~~d~vi~~a~~~~---------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
.+|++||+++... .+ ++.+++.+. +.+++|++||...+... .
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 145 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY-----------A 145 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC-----------C
Confidence 5899999987521 12 344455554 45799999998765321 1
Q ss_pred CC-ccchhhHHHHHHhh------hcCCcEEEeccCeeecC
Q 022578 125 PK-SRHKGKLNTESVLE------SKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 125 p~-~~~~~k~~~E~~~~------~~~~~~~i~R~~~i~g~ 157 (295)
+. .|..+|...|.+++ ..++++..++||.+-.+
T Consensus 146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 22 24589999988874 35799999999987554
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.6e-12 Score=119.46 Aligned_cols=203 Identities=17% Similarity=0.210 Sum_probs=127.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--ccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||.+++++|+++|++|++++|+........ ..+.. ....+..+.+|++|.+++.+++++. ++
T Consensus 420 TGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~-----~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i 494 (676)
T TIGR02632 420 TGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVA-----AEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV 494 (676)
T ss_pred eCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999999999999865522110 01111 0135778999999999998888753 69
Q ss_pred cEEEEcccCChh--------------------c----HHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 74 d~vi~~a~~~~~--------------------~----~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
|+|||+||.... + ++.++..++ + ..++|++||...+.... ...
T Consensus 495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~----------~~~ 564 (676)
T TIGR02632 495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK----------NAS 564 (676)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC----------CCH
Confidence 999999986211 1 112333333 2 35899999965432211 112
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeee-cCCCCCchHHHHHHHHH-cCCC----cccCCCCCceeeeeeHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLK-AGRP----IPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~-g~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~i~~~ 193 (295)
.|..+|+..+.+++ ..|+++..++|+.++ +.+..... +...... .+.. ...+........+++++
T Consensus 565 aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe 642 (676)
T TIGR02632 565 AYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGE--WREERAAAYGIPADELEEHYAKRTLLKRHIFPA 642 (676)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccccc--chhhhhhcccCChHHHHHHHHhcCCcCCCcCHH
Confidence 35599999888764 247999999999987 33221110 0000000 0000 00011122233568899
Q ss_pred HHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 194 DLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 194 D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
|+|+++..++... ...|..+++.++..
T Consensus 643 DVA~av~~L~s~~~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 643 DIAEAVFFLASSKSEKTTGCIITVDGGVP 671 (676)
T ss_pred HHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence 9999999988643 34578899888743
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.7e-12 Score=103.95 Aligned_cols=195 Identities=17% Similarity=0.171 Sum_probs=124.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||+.++++|+++|++|++++|++....... .++.+ ..++.++.+|++|++++.+++++ ..+|+
T Consensus 6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKAL-----KELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999875532111 01111 13678899999999998887754 27899
Q ss_pred EEEcccCCh----------------------hc----HHHHHHhC--C-CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 76 VYDINGREA----------------------DE----VEPILDAL--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 76 vi~~a~~~~----------------------~~----~~~ll~~~--~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
+||++|... .+ ++.++..+ + +..++|++||...+...+ ...
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~----------~~~ 149 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMP----------PLV 149 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCC----------Cch
Confidence 999998521 00 11223322 2 456899999987642111 112
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch----------HHH-HHHHHHcCCCcccCCCCCceee
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEW-FFHRLKAGRPIPIPGSGIQVTQ 188 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
.|..+|...+.+.+ ..|+++..+.||.+-.+...... ... ..+..... . ....
T Consensus 150 ~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~r 220 (259)
T PRK08340 150 LADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER--T-------PLKR 220 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc--C-------CccC
Confidence 24488888877653 35789999999988776321000 000 00011110 0 1123
Q ss_pred eeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 189 LGHVKDLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 189 ~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+..++|+|++++.++.+. ...|..+.+.++..
T Consensus 221 ~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~ 254 (259)
T PRK08340 221 TGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMT 254 (259)
T ss_pred CCCHHHHHHHHHHHcCcccccccCceEeecCCcC
Confidence 467899999999998753 34677777777643
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.3e-12 Score=107.98 Aligned_cols=216 Identities=17% Similarity=0.084 Sum_probs=128.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-hHHHHHhhhcC--CCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAK--GFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~--~~d~vi 77 (295)
+||||.+|+.+++.|+++|+.|+++.|+..+....+.. ..-......+..|... .+.+..+.+.. ...+++
T Consensus 85 vGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~------~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~ 158 (411)
T KOG1203|consen 85 VGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV------FFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVI 158 (411)
T ss_pred ecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc------cccccccceeeeccccccchhhhhhhhccccceeEE
Confidence 59999999999999999999999999998874332210 0001334445554443 34444444422 234555
Q ss_pred EcccC-------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhc
Q 022578 78 DINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK 142 (295)
Q Consensus 78 ~~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~ 142 (295)
-+++. .-.+++|+++||+ +++|+|++|+++..-.....+.... ......+|..+|.++++.
T Consensus 159 ~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~----~~~~~~~k~~~e~~~~~S 234 (411)
T KOG1203|consen 159 KGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLL----NGLVLKAKLKAEKFLQDS 234 (411)
T ss_pred ecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhh----hhhhhHHHHhHHHHHHhc
Confidence 55442 2347999999998 9999999998876321111110000 111248889999999999
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccC
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t 222 (295)
|++++|+|++...-+........ . ...... ...+..-..+.-.|+|+.+++++.+.....+.+.......-.
T Consensus 235 gl~ytiIR~g~~~~~~~~~~~~~-----~-~~~~~~--~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~g 306 (411)
T KOG1203|consen 235 GLPYTIIRPGGLEQDTGGQREVV-----V-DDEKEL--LTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVLKPEG 306 (411)
T ss_pred CCCcEEEeccccccCCCCcceec-----c-cCcccc--ccccccceeeehhhHHHHHHHHHhhhhhccceeEEeecCCCC
Confidence 99999999998776432110000 0 111111 111111146888999999999998876655333333322233
Q ss_pred HHHHHHHHHHHh
Q 022578 223 FDGLARACAKVT 234 (295)
Q Consensus 223 ~~e~~~~i~~~~ 234 (295)
.....+.+.+..
T Consensus 307 pg~~~~~l~~~~ 318 (411)
T KOG1203|consen 307 PGRPYKVLLELF 318 (411)
T ss_pred CCccHHHHHhhc
Confidence 333333344433
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.8e-11 Score=102.54 Aligned_cols=190 Identities=15% Similarity=0.096 Sum_probs=118.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----CCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v 76 (295)
|||+|+||.+++++|+++|++|++.++......... ..++.....++.++.+|++|.+++.++++. ..+|++
T Consensus 18 TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~----~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~l 93 (306)
T PRK07792 18 TGAAAGLGRAEALGLARLGATVVVNDVASALDASDV----LDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIV 93 (306)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHH----HHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 799999999999999999999999887643211110 111222234688999999999888887764 268999
Q ss_pred EEcccCC--------------------hhcHHHHHHhCC-----C--------CCcEEEeeccccccCCCCCCCCCCCCC
Q 022578 77 YDINGRE--------------------ADEVEPILDALP-----N--------LEQFIYCSSAGVYLKSDLLPHCETDTV 123 (295)
Q Consensus 77 i~~a~~~--------------------~~~~~~ll~~~~-----~--------~~~~i~~Ss~~v~~~~~~~~~~e~~~~ 123 (295)
||++|.. ..++.++++++. . ..++|++||...+... .
T Consensus 94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~ 163 (306)
T PRK07792 94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP----------V 163 (306)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----------C
Confidence 9999862 123344444421 1 2489999987654221 1
Q ss_pred CCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 124 ~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
....|..+|...+.+.+ .+|+++..+.|+. ..+ ....++ ...+... .....++.++|++
T Consensus 164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~-----~~~~~~----~~~~~~~----~~~~~~~~pe~va 229 (306)
T PRK07792 164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA-----MTADVF----GDAPDVE----AGGIDPLSPEHVV 229 (306)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc-----hhhhhc----cccchhh----hhccCCCCHHHHH
Confidence 12235599999887753 3688999999973 111 101110 0000000 0112345799999
Q ss_pred HHHHHHhcCC--CCCCceEEecCC
Q 022578 197 RAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
.++..++... ...|+.|.+.++
T Consensus 230 ~~v~~L~s~~~~~~tG~~~~v~gg 253 (306)
T PRK07792 230 PLVQFLASPAAAEVNGQVFIVYGP 253 (306)
T ss_pred HHHHHHcCccccCCCCCEEEEcCC
Confidence 9999888653 235666666543
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.5e-11 Score=102.68 Aligned_cols=193 Identities=15% Similarity=0.180 Sum_probs=121.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.+...+.. .....++.++.+|+.+.+++.++++. ..+|+
T Consensus 11 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 11 TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELE--------AAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------hhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865422111 11124588899999999888777764 26899
Q ss_pred EEEcccCC-------------------------hhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE-------------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 76 vi~~a~~~-------------------------~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+||++|.. ..++..+++++ . ...++|++||...+.... ..
T Consensus 83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~ 152 (262)
T TIGR03325 83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG----------GG 152 (262)
T ss_pred EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC----------CC
Confidence 99999741 11122333333 2 335789988865432111 11
Q ss_pred CccchhhHHHHHHhh----h--cCCcEEEeccCeeecCCCCCchH---H----HH-HHHHHcCCCcccCCCCCceeeeee
Q 022578 126 KSRHKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVE---E----WF-FHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~~~~~~---~----~~-~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
..|..+|...+.+.+ + ..+++..+.||.+..+-...... . .. .....+. .++ ...+..
T Consensus 153 ~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-------~~r~~~ 224 (262)
T TIGR03325 153 PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLP-------IGRMPD 224 (262)
T ss_pred chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCC-------CCCCCC
Confidence 235589999988763 2 23889999999988763211000 0 00 0000010 011 123456
Q ss_pred HHHHHHHHHHHhcCCC---CCCceEEecCCc
Q 022578 192 VKDLARAFVQVLGNEK---ASRQVFNISGEK 219 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~~---~~~~~~~i~~~~ 219 (295)
++|+|++++.++.++. ..|..+.+.++.
T Consensus 225 p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~ 255 (262)
T TIGR03325 225 AEEYTGAYVFFATRGDTVPATGAVLNYDGGM 255 (262)
T ss_pred hHHhhhheeeeecCCCcccccceEEEecCCe
Confidence 8999999999886532 367778887663
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.8e-12 Score=118.27 Aligned_cols=142 Identities=16% Similarity=0.078 Sum_probs=102.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+..+..+.. ..+.....++.++.+|++|++++.++++.. .+|+
T Consensus 321 ~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 395 (582)
T PRK05855 321 TGAGSGIGRETALAFAREGAEVVASDIDEAAAERTA-----ELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI 395 (582)
T ss_pred ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 699999999999999999999999999865522110 111222346889999999999988887642 5899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++.+++++ +. + ..++|++||...|..... ...|
T Consensus 396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------~~~Y 465 (582)
T PRK05855 396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS----------LPAY 465 (582)
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC----------CcHH
Confidence 99999862 2233444444 22 2 358999999887753221 1235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecC
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~ 157 (295)
..+|+..+.+.+ ..|++++.++||.+-.+
T Consensus 466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 599998877652 46899999999988665
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.7e-12 Score=117.93 Aligned_cols=172 Identities=15% Similarity=0.160 Sum_probs=119.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++...+.. ..+.....++.++.+|++|.+++.+++++. .+|+
T Consensus 377 tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 451 (657)
T PRK07201 377 TGASSGIGRATAIKVAEAGATVFLVARNGEALDELV-----AEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY 451 (657)
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999876532111 111122346889999999999998887642 6999
Q ss_pred EEEcccCCh----------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGREA----------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~~----------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||++|... .+ ++.++..++ +..++|++||.+.+..... ...
T Consensus 452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~ 521 (657)
T PRK07201 452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR----------FSA 521 (657)
T ss_pred EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC----------cch
Confidence 999998521 11 222334444 5679999999887643211 123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|+..+.+.+ ..++++++++||.+..+..... .. .. ....++++++|+.++
T Consensus 522 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------------~~---~~----~~~~~~~~~~a~~i~ 582 (657)
T PRK07201 522 YVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------------KR---YN----NVPTISPEEAADMVV 582 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------------cc---cc----CCCCCCHHHHHHHHH
Confidence 5589999888763 3589999999999887632110 00 00 113477999999999
Q ss_pred HHhcCC
Q 022578 201 QVLGNE 206 (295)
Q Consensus 201 ~~~~~~ 206 (295)
..+.+.
T Consensus 583 ~~~~~~ 588 (657)
T PRK07201 583 RAIVEK 588 (657)
T ss_pred HHHHhC
Confidence 987653
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.9e-11 Score=102.70 Aligned_cols=180 Identities=17% Similarity=0.130 Sum_probs=113.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccC-CeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||+|.||.++++.|+++|++|++++|+++...... .++..... .+.++.+|+++++++..+++. .++|
T Consensus 6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQTV-----ADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999999999998765421110 01111112 245678999999888776653 2589
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C---CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+|||++|.. ..+..++++++ . ...++|++||...+.+.. ....
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~----------~~~~ 150 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP----------WHAA 150 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC----------CCcc
Confidence 999999852 22344445543 1 246899999875432110 1122
Q ss_pred cchhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCch------HHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 128 RHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 128 ~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
|..+|...+.+. ...++++++++||.+.++...... ......... . ......+.++|
T Consensus 151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~ 220 (272)
T PRK07832 151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV--------D--RFRGHAVTPEK 220 (272)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH--------H--hcccCCCCHHH
Confidence 457887666554 346899999999999887421100 000000000 0 01123478999
Q ss_pred HHHHHHHHhcC
Q 022578 195 LARAFVQVLGN 205 (295)
Q Consensus 195 ~a~~i~~~~~~ 205 (295)
+|++++.++.+
T Consensus 221 vA~~~~~~~~~ 231 (272)
T PRK07832 221 AAEKILAGVEK 231 (272)
T ss_pred HHHHHHHHHhc
Confidence 99999999964
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.2e-11 Score=97.67 Aligned_cols=191 Identities=9% Similarity=0.027 Sum_probs=121.5
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+ +-||..++++|+++|++|++..|+... ..... ++ ...++.++.+|++|++++.++++. ..+
T Consensus 13 tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~-~~~~~-----~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 13 MGVANKRSIAWGCAQAIKDQGATVIYTYQNDRM-KKSLQ-----KL--VDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred eCCCCCCchHHHHHHHHHHCCCEEEEecCchHH-HHHHH-----hh--ccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 6888 799999999999999999999887321 11110 00 113578899999999888877654 268
Q ss_pred cEEEEcccCCh------------------------hc----HHHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DE----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||++|... .+ ++.++..+....++|++||....... ...
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~----------~~~ 154 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI----------PNY 154 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC----------Ccc
Confidence 99999998521 11 22233334433689999986542110 111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..|+++..+.||.+-.+..... ......+......+ . ..+..++|+|+
T Consensus 155 ~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p----~-----~r~~~pedva~ 225 (252)
T PRK06079 155 NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTV----D-----GVGVTIEEVGN 225 (252)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCc----c-----cCCCCHHHHHH
Confidence 234589999887763 3689999999999977632110 01112222211111 1 12467899999
Q ss_pred HHHHHhcCC--CCCCceEEecCC
Q 022578 198 AFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
++..++... ...|+.+.+.++
T Consensus 226 ~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 226 TAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred HHHHHhCcccccccccEEEeCCc
Confidence 999998753 335777777665
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.5e-11 Score=99.59 Aligned_cols=203 Identities=14% Similarity=0.101 Sum_probs=123.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----CCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v 76 (295)
||+ |.||.+++++|. +|++|++++|+..+..+.. .++.....++.++.+|++|.+++.++++. ..+|++
T Consensus 8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA-----KTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 576 789999999996 8999999999865422111 11122223678899999999999888764 369999
Q ss_pred EEcccCC-------------hhcHHHHHHhCC----CCCcEEEeeccccccCCC-----CCC---CCCCC--------C-
Q 022578 77 YDINGRE-------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSD-----LLP---HCETD--------T- 122 (295)
Q Consensus 77 i~~a~~~-------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~-----~~~---~~e~~--------~- 122 (295)
||+||.. ..++.++++++. ...++|++||........ ... .+..+ +
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD 160 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence 9999862 334444555432 234678888765432110 000 00000 0
Q ss_pred ---CCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch---HHHHHHHHHcCCCcccCCCCCceeee
Q 022578 123 ---VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQL 189 (295)
Q Consensus 123 ---~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
.....|..+|+..+.+.+ ..|+++..+.||.+..+.....+ .......+....+ ...+
T Consensus 161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---------~~r~ 231 (275)
T PRK06940 161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP---------AGRP 231 (275)
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC---------cccC
Confidence 011234589998777653 35899999999999876321100 0011111111111 1134
Q ss_pred eeHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 190 GHVKDLARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 190 i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
..++|+|+++..++... ...|..+.+.++.
T Consensus 232 ~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred CCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 67999999999998643 2367788887764
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.5e-11 Score=100.28 Aligned_cols=198 Identities=11% Similarity=0.067 Sum_probs=123.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcC-CCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~ 78 (295)
|||+|.+|..+++.|+++|++|++++|++.+..... ..+.. ...++.++.+|+++++++..+++.. .+|++||
T Consensus 13 tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~ 87 (259)
T PRK06125 13 TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALA-----ADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVN 87 (259)
T ss_pred eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence 699999999999999999999999999876532110 01111 1245788999999999998888753 6999999
Q ss_pred cccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cchh
Q 022578 79 INGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKG 131 (295)
Q Consensus 79 ~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~~ 131 (295)
++|.. ..+...++++ +. +..++|++||..... +..... |..+
T Consensus 88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~y~as 156 (259)
T PRK06125 88 NAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----------PDADYICGSAG 156 (259)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----------CCCCchHhHHH
Confidence 99862 1223333333 33 345899998864321 111122 3378
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHc---CCC--cccCCCCCceeeeeeHHHHHHHH
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRP--IPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|...+.+.+ ..+++++.+.||.+..+.. ..++..... +.+ ...+-.......+..++|+|+++
T Consensus 157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 231 (259)
T PRK06125 157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRM-----LTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV 231 (259)
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHH-----HHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHH
Confidence 888776653 3589999999999877621 111100000 000 00000000011346789999999
Q ss_pred HHHhcCC--CCCCceEEecCCc
Q 022578 200 VQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+.++.+. ..+|..+.+.++.
T Consensus 232 ~~l~~~~~~~~~G~~i~vdgg~ 253 (259)
T PRK06125 232 AFLASPRSGYTSGTVVTVDGGI 253 (259)
T ss_pred HHHcCchhccccCceEEecCCe
Confidence 9998753 2367788887764
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=100.54 Aligned_cols=174 Identities=13% Similarity=0.132 Sum_probs=117.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC--CCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~ 78 (295)
|||+|.||+++++.|+++|++|++++|+.++...... ..+++++.+|+++++++.+++++. .+|++||
T Consensus 6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK----------ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 6999999999999999999999999998655221110 124678999999999998887642 5899999
Q ss_pred cccCC-----h---------h-----------cHHHHHH----hCCCCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 79 INGRE-----A---------D-----------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 79 ~a~~~-----~---------~-----------~~~~ll~----~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+++.. . + +...+++ .++...++|++||... .....|.
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------------~~~~~Y~ 141 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------------PAGSAEA 141 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------------CCccccH
Confidence 98631 0 0 1112222 2333368999998641 0112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..++++..+.||.+..+.. +.. .. . + ...++|+++++..+
T Consensus 142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~---------~~~--~~-~--p--------~~~~~~ia~~~~~l 199 (223)
T PRK05884 142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY---------DGL--SR-T--P--------PPVAAEIARLALFL 199 (223)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh---------hhc--cC-C--C--------CCCHHHHHHHHHHH
Confidence 89998877653 4679999999998765410 100 00 0 0 12689999999998
Q ss_pred hcCC--CCCCceEEecCCcc
Q 022578 203 LGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~ 220 (295)
+... ...|+.+.+.++..
T Consensus 200 ~s~~~~~v~G~~i~vdgg~~ 219 (223)
T PRK05884 200 TTPAARHITGQTLHVSHGAL 219 (223)
T ss_pred cCchhhccCCcEEEeCCCee
Confidence 8753 23677787777653
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=5e-11 Score=98.15 Aligned_cols=172 Identities=15% Similarity=0.081 Sum_probs=109.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCC--hHHHHHhhh----c--C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKD--YDFVKSSLS----A--K 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~--~~~~~~~~~----~--~ 71 (295)
|||+|++|.++++.|+++|++|++++|++....... .++.+ ....+.++.+|+.+ .+.+.++++ . .
T Consensus 12 tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~ 86 (239)
T PRK08703 12 TGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVY-----DAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQG 86 (239)
T ss_pred ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHH-----HHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCC
Confidence 699999999999999999999999999876522111 01111 11346678899875 334443331 1 2
Q ss_pred CCcEEEEcccCC---------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 72 GFDVVYDINGRE---------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 72 ~~d~vi~~a~~~---------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
.+|+|||++|.. ..+..++++++ . +..++|++||....... ..
T Consensus 87 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~~ 156 (239)
T PRK08703 87 KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPK----------AY 156 (239)
T ss_pred CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCC----------CC
Confidence 689999999851 22333344443 2 45799999986532110 01
Q ss_pred CCccchhhHHHHHHhhh-------c-CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLES-------K-GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~~-------~-~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
-..|..+|+..+.+++. . ++++..++||.+++|..... .++ .........+|++
T Consensus 157 ~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~----------------~~~--~~~~~~~~~~~~~ 218 (239)
T PRK08703 157 WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS----------------HPG--EAKSERKSYGDVL 218 (239)
T ss_pred ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc----------------CCC--CCccccCCHHHHH
Confidence 12355999998887631 2 58999999999999842100 011 1112346899999
Q ss_pred HHHHHHhcC
Q 022578 197 RAFVQVLGN 205 (295)
Q Consensus 197 ~~i~~~~~~ 205 (295)
..+..++..
T Consensus 219 ~~~~~~~~~ 227 (239)
T PRK08703 219 PAFVWWASA 227 (239)
T ss_pred HHHHHHhCc
Confidence 999999874
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.9e-11 Score=95.94 Aligned_cols=162 Identities=17% Similarity=0.165 Sum_probs=111.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|.||.+++++|.++ ++|++++|++. .+.+|++|.+++++++++. ++|++||+
T Consensus 6 tGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ 62 (199)
T PRK07578 6 IGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------DVQVDITDPASIRALFEKVGKVDAVVSA 62 (199)
T ss_pred EcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence 699999999999999999 99999988632 2578999999999988764 79999999
Q ss_pred ccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHH
Q 022578 80 NGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNT 135 (295)
Q Consensus 80 a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~ 135 (295)
+|.. ..++.++++++. +..+++++||....... .....|..+|...
T Consensus 63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~----------~~~~~Y~~sK~a~ 132 (199)
T PRK07578 63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI----------PGGASAATVNGAL 132 (199)
T ss_pred CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC----------CCchHHHHHHHHH
Confidence 9862 122344555432 44679999876532110 1112355888887
Q ss_pred HHHhh------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 136 ESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 136 E~~~~------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
+.+.+ ..++++..++||.+-.+.. . .+..+ ++ ..++.++|+|+++..+++.. ..
T Consensus 133 ~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~------~------~~~~~--~~-----~~~~~~~~~a~~~~~~~~~~-~~ 192 (199)
T PRK07578 133 EGFVKAAALELPRGIRINVVSPTVLTESLE------K------YGPFF--PG-----FEPVPAARVALAYVRSVEGA-QT 192 (199)
T ss_pred HHHHHHHHHHccCCeEEEEEcCCcccCchh------h------hhhcC--CC-----CCCCCHHHHHHHHHHHhccc-ee
Confidence 76653 3589999999998744310 0 01111 11 13578999999999998754 45
Q ss_pred CceEEe
Q 022578 210 RQVFNI 215 (295)
Q Consensus 210 ~~~~~i 215 (295)
|+.|++
T Consensus 193 g~~~~~ 198 (199)
T PRK07578 193 GEVYKV 198 (199)
T ss_pred eEEecc
Confidence 666664
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.3e-11 Score=99.26 Aligned_cols=139 Identities=19% Similarity=0.146 Sum_probs=96.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---CCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~~~d~vi 77 (295)
|||+|++|+.++++|+++|++|++++|++...... .. ..++.++.+|++|+++++++++. .++|+||
T Consensus 7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~---------~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL---------QA-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH---------Hh-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 79999999999999999999999999997663211 11 24678889999999888877764 3699999
Q ss_pred EcccCC----------------------hhcHHHHHHh----CC-CCCcEEEeeccccccCCCCCCCCCCCCCCCC-ccc
Q 022578 78 DINGRE----------------------ADEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRH 129 (295)
Q Consensus 78 ~~a~~~----------------------~~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~~~ 129 (295)
|++|.. ..+...++++ ++ +..+++++||.. +..... +..+. .|.
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~~------~~~~~~~Y~ 148 (225)
T PRK08177 77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVELP------DGGEMPLYK 148 (225)
T ss_pred EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--cccccC------CCCCccchH
Confidence 998762 1123334443 33 335788888643 221110 11112 245
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecC
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~ 157 (295)
.+|...+.+++ ..++++..++||.+-.+
T Consensus 149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 99999988774 35688999999987665
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=3e-11 Score=90.48 Aligned_cols=133 Identities=21% Similarity=0.193 Sum_probs=103.8
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
.||||-+|+.+++.+++++ .+|+++.|+....++. ..++.....|.+..+++...+. ++|+.|+
T Consensus 24 lGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------------~k~v~q~~vDf~Kl~~~a~~~q--g~dV~Fc 89 (238)
T KOG4039|consen 24 LGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------------DKVVAQVEVDFSKLSQLATNEQ--GPDVLFC 89 (238)
T ss_pred EeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------------cceeeeEEechHHHHHHHhhhc--CCceEEE
Confidence 4999999999999999997 4999999885332222 2467788889988888888888 9999999
Q ss_pred cccC-------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcC
Q 022578 79 INGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG 143 (295)
Q Consensus 79 ~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~ 143 (295)
+.|. ..+....++++++ |+++|+.+||.+. ++....-|.+.|.+.|+-+.+..
T Consensus 90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA------------d~sSrFlY~k~KGEvE~~v~eL~ 157 (238)
T KOG4039|consen 90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA------------DPSSRFLYMKMKGEVERDVIELD 157 (238)
T ss_pred eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC------------Ccccceeeeeccchhhhhhhhcc
Confidence 8665 2344667788887 9999999999875 22222234489999999887766
Q ss_pred C-cEEEeccCeeecCCC
Q 022578 144 V-NWTSLRPVYIYGPLN 159 (295)
Q Consensus 144 ~-~~~i~R~~~i~g~~~ 159 (295)
+ .++|+|||.+.|.+.
T Consensus 158 F~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 158 FKHIIILRPGPLLGERT 174 (238)
T ss_pred ccEEEEecCcceecccc
Confidence 5 588999999999764
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.2e-11 Score=98.15 Aligned_cols=172 Identities=15% Similarity=0.077 Sum_probs=114.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---CCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~~~d~vi 77 (295)
|||+|.||++++++|+++|++|++++|+++..... . ..+++++.+|+++.+.+..++.+ .++|+||
T Consensus 7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~---------~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 7 VGASRGIGREFVRQYRADGWRVIATARDAAALAAL---------Q--ALGAEALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred EcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH---------H--hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 79999999999999999999999999986652211 1 13567899999999988886533 2589999
Q ss_pred EcccCC----------------------hhcHHHHHHhCC-----CCCcEEEeeccc-cccCCCCCCCCCCCCCCCCccc
Q 022578 78 DINGRE----------------------ADEVEPILDALP-----NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 78 ~~a~~~----------------------~~~~~~ll~~~~-----~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|+++.. ..++.++++++. ...++|++||.. .++.... .....|.
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------~~~~~Y~ 147 (222)
T PRK06953 76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG--------TTGWLYR 147 (222)
T ss_pred ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC--------CCccccH
Confidence 998762 123444554432 335789998854 3432111 0012355
Q ss_pred hhhHHHHHHhhh-----cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 130 KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 130 ~~k~~~E~~~~~-----~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
.+|...+.+++. .+++++.++||.+..+... + ...+..++.++.+..++.
T Consensus 148 ~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~----~~~~~~~~~~~~~~~~~~ 202 (222)
T PRK06953 148 ASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A----QAALDPAQSVAGMRRVIA 202 (222)
T ss_pred HhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C----CCCCCHHHHHHHHHHHHH
Confidence 899998887753 3678999999988776210 0 112567888888888765
Q ss_pred CCC--CCCceEEec
Q 022578 205 NEK--ASRQVFNIS 216 (295)
Q Consensus 205 ~~~--~~~~~~~i~ 216 (295)
... ..+..|...
T Consensus 203 ~~~~~~~~~~~~~~ 216 (222)
T PRK06953 203 QATRRDNGRFFQYD 216 (222)
T ss_pred hcCcccCceEEeeC
Confidence 432 234445444
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=1e-10 Score=97.98 Aligned_cols=195 Identities=13% Similarity=0.111 Sum_probs=117.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHH----HHhhhc-----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFV----KSSLSA----- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~----~~~~~~----- 70 (295)
|||+|+||.+++++|+++|++|+++.|+..+....+ ..++.. ....+.++.+|++|.+.+ .+++++
T Consensus 7 TGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~ 82 (267)
T TIGR02685 7 TGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTL----AAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF 82 (267)
T ss_pred eCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHH----HHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence 799999999999999999999999876543211110 001111 123466789999998754 333321
Q ss_pred CCCcEEEEcccCCh-------------------------------hcHHHHHHh----CC--------CCCcEEEeeccc
Q 022578 71 KGFDVVYDINGREA-------------------------------DEVEPILDA----LP--------NLEQFIYCSSAG 107 (295)
Q Consensus 71 ~~~d~vi~~a~~~~-------------------------------~~~~~ll~~----~~--------~~~~~i~~Ss~~ 107 (295)
.++|+|||+||... .+...++++ ++ ...++|++||..
T Consensus 83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~ 162 (267)
T TIGR02685 83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM 162 (267)
T ss_pred CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence 26999999998521 012223222 21 113577777654
Q ss_pred cccCCCCCCCCCCCCCCC-CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCccc
Q 022578 108 VYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179 (295)
Q Consensus 108 v~~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 179 (295)
... +..+ ..|..+|...+.+.+ ..|++++.++||.+..|.... .......... .+.
T Consensus 163 ~~~-----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---~~~~~~~~~~--~~~ 226 (267)
T TIGR02685 163 TDQ-----------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---FEVQEDYRRK--VPL 226 (267)
T ss_pred ccC-----------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---hhHHHHHHHh--CCC
Confidence 321 1111 235599999988763 358999999999987664321 1111111111 111
Q ss_pred CCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 180 PGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 180 ~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
+ ..+..++|++++++.++.+. ...|..+.+.++..+
T Consensus 227 -~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~ 264 (267)
T TIGR02685 227 -G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264 (267)
T ss_pred -C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence 1 12357899999999998764 236777888776544
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.3e-11 Score=103.22 Aligned_cols=153 Identities=14% Similarity=0.039 Sum_probs=102.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+|.||.+++++|+++|++|+++.|+.++..+... ++.+. ..++.++.+|+.|.++++++++. ..+
T Consensus 20 TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~-----~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i 94 (313)
T PRK05854 20 TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVA-----AIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI 94 (313)
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 7999999999999999999999999998765322111 11111 13588999999999998887764 258
Q ss_pred cEEEEcccCC-------------------hhc----HHHHHHhCC-CCCcEEEeeccccccC-CCCCCCCCCCCCCCCc-
Q 022578 74 DVVYDINGRE-------------------ADE----VEPILDALP-NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKS- 127 (295)
Q Consensus 74 d~vi~~a~~~-------------------~~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~p~~- 127 (295)
|++||+||.. ..+ ++.++..++ +..++|++||...+.. .....+.+.....+..
T Consensus 95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~ 174 (313)
T PRK05854 95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRA 174 (313)
T ss_pred cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhh
Confidence 9999999862 111 223344444 4569999999765432 1111222222333333
Q ss_pred cchhhHHHHHHhh---------hcCCcEEEeccCeeecCC
Q 022578 128 RHKGKLNTESVLE---------SKGVNWTSLRPVYIYGPL 158 (295)
Q Consensus 128 ~~~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~ 158 (295)
|..+|...+.+.+ ..++.+..+.||.+..+.
T Consensus 175 Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 175 YSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 4499998776652 236899999999987653
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-10 Score=96.61 Aligned_cols=173 Identities=14% Similarity=0.136 Sum_probs=109.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCC--ChHHHHHhhhc-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRK--DYDFVKSSLSA-----KG 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~--~~~~~~~~~~~-----~~ 72 (295)
|||+|+||.+++++|++.|++|++++|++.+..... .++... ..++.++.+|++ +.+.+.++++. ..
T Consensus 18 tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 92 (247)
T PRK08945 18 TGAGDGIGREAALTYARHGATVILLGRTEEKLEAVY-----DEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR 92 (247)
T ss_pred eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence 799999999999999999999999999875532111 011111 135778888886 45444443322 17
Q ss_pred CcEEEEcccC---------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGR---------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 73 ~d~vi~~a~~---------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+|+|||+++. |..++.++++++ . +..+||++||.....+.. .-
T Consensus 93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~----------~~ 162 (247)
T PRK08945 93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRA----------NW 162 (247)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCC----------CC
Confidence 8999999875 122333444443 3 667999999976432211 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..|..+|+..+.+++ ..+++++.++|+.+-++-.. ...... ....+...+|+++.
T Consensus 163 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~---------~~~~~~---------~~~~~~~~~~~~~~ 224 (247)
T PRK08945 163 GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA---------SAFPGE---------DPQKLKTPEDIMPL 224 (247)
T ss_pred cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh---------hhcCcc---------cccCCCCHHHHHHH
Confidence 235589998888763 24788999999887654210 000000 01235678999999
Q ss_pred HHHHhcCC
Q 022578 199 FVQVLGNE 206 (295)
Q Consensus 199 i~~~~~~~ 206 (295)
+..++.+.
T Consensus 225 ~~~~~~~~ 232 (247)
T PRK08945 225 YLYLMGDD 232 (247)
T ss_pred HHHHhCcc
Confidence 99987653
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.9e-10 Score=94.75 Aligned_cols=197 Identities=11% Similarity=0.034 Sum_probs=120.6
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+ +-||..++++|+++|++|++..|+.+... .. ....++.+....+.++.+|++|++++.++++.. .+
T Consensus 12 tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 88 (258)
T PRK07370 12 TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGR-FE--KKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKL 88 (258)
T ss_pred eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccch-HH--HHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCC
Confidence 6875 79999999999999999988876543210 00 000111111234678899999999998877652 68
Q ss_pred cEEEEcccCCh------------------------hcH----HHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~----~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||++|... .+. +.++..++...++|++||....... ...
T Consensus 89 D~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------~~~ 158 (258)
T PRK07370 89 DILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAI----------PNY 158 (258)
T ss_pred CEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCC----------ccc
Confidence 99999998531 112 2233333333689999986542110 111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..|+++..+.||.+-.+.... ..............+ ...+...+|+++
T Consensus 159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~ 229 (258)
T PRK07370 159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP---------LRRTVTQTEVGN 229 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC---------cCcCCCHHHHHH
Confidence 235589998887763 357999999999987763110 000111111111111 113456899999
Q ss_pred HHHHHhcCCC--CCCceEEecCCc
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
++..++.+.. ..|+.+.+.++.
T Consensus 230 ~~~fl~s~~~~~~tG~~i~vdgg~ 253 (258)
T PRK07370 230 TAAFLLSDLASGITGQTIYVDAGY 253 (258)
T ss_pred HHHHHhChhhccccCcEEEECCcc
Confidence 9999987532 356777776653
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.6e-10 Score=94.87 Aligned_cols=195 Identities=14% Similarity=0.079 Sum_probs=120.1
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCC----C--CCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL----P--GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK- 71 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~- 71 (295)
|||+| .||.+++++|+++|++|+++.|......... . ......+.+....+.++.+|+++.+++.++++..
T Consensus 12 tGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~ 91 (256)
T PRK12859 12 TGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVT 91 (256)
T ss_pred ECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 69985 7999999999999999998765421100000 0 0001112222346788999999999888887642
Q ss_pred ----CCcEEEEcccCCh--------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC
Q 022578 72 ----GFDVVYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD 121 (295)
Q Consensus 72 ----~~d~vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~ 121 (295)
.+|++||++|... .+ ++.++..++ +..++|++||.......
T Consensus 92 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 162 (256)
T PRK12859 92 EQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM--------- 162 (256)
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC---------
Confidence 4899999998621 11 223344444 45699999997653211
Q ss_pred CCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 122 ~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
.....|..+|+..+.+.+ ..+++++.++||.+-.+.... ..........+ ...+..++|
T Consensus 163 -~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----~~~~~~~~~~~---------~~~~~~~~d 228 (256)
T PRK12859 163 -VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----EIKQGLLPMFP---------FGRIGEPKD 228 (256)
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----HHHHHHHhcCC---------CCCCcCHHH
Confidence 111234589998887753 368999999999887653211 11111111111 112356899
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCC
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
+|+++..++... ...|+.+.+.++
T Consensus 229 ~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 229 AARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred HHHHHHHHhCccccCccCcEEEeCCC
Confidence 999999988653 235666766654
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.6e-10 Score=91.19 Aligned_cols=179 Identities=16% Similarity=0.104 Sum_probs=113.4
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi 77 (295)
|||+|+||.+++++|+++| +.|....|+.... .. ..++.++++|+++.+++.++.++. ++|+||
T Consensus 6 tGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~----------~~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 6 VGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQ----------HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred ECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cc----------cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 7999999999999999985 5666666654331 11 247889999999998877765432 789999
Q ss_pred EcccCChh------------------------------cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 78 DINGREAD------------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 78 ~~a~~~~~------------------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++|.... .++.++..++ +..+++++||.. +... +.....-
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~-----~~~~~~~ 145 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSIS-----DNRLGGW 145 (235)
T ss_pred ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccc-----cCCCCCc
Confidence 99987421 1223334444 346888988632 1110 0011111
Q ss_pred CccchhhHHHHHHhhh---------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 126 KSRHKGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~~---------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
..|..+|+..+.+.+. .++.+..+.||.+..+.... .....+ ...++..+|+|
T Consensus 146 ~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~~~---------~~~~~~~~~~a 207 (235)
T PRK09009 146 YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---------FQQNVP---------KGKLFTPEYVA 207 (235)
T ss_pred chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---------hhhccc---------cCCCCCHHHHH
Confidence 2355889988877631 47889999999987763211 001111 11246799999
Q ss_pred HHHHHHhcCCC--CCCceEEecC
Q 022578 197 RAFVQVLGNEK--ASRQVFNISG 217 (295)
Q Consensus 197 ~~i~~~~~~~~--~~~~~~~i~~ 217 (295)
++++.++.... ..|..+.+.+
T Consensus 208 ~~~~~l~~~~~~~~~g~~~~~~g 230 (235)
T PRK09009 208 QCLLGIIANATPAQSGSFLAYDG 230 (235)
T ss_pred HHHHHHHHcCChhhCCcEEeeCC
Confidence 99999998653 3455555544
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-10 Score=96.24 Aligned_cols=184 Identities=13% Similarity=0.093 Sum_probs=115.9
Q ss_pred HHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC--CCcEEEEcccC------
Q 022578 11 LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYDINGR------ 82 (295)
Q Consensus 11 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~~a~~------ 82 (295)
+++.|+++|++|++++|+.++. ...+++.+|++|.+++.+++++. ++|++||+||.
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~ 64 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGM----------------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPV 64 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchh----------------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCH
Confidence 4788999999999999987651 11356899999999999988753 69999999986
Q ss_pred ------ChhcHHHHHHhC----CCCCcEEEeeccccccCCCCCCCCCC----------------CCCCC-CccchhhHHH
Q 022578 83 ------EADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCET----------------DTVDP-KSRHKGKLNT 135 (295)
Q Consensus 83 ------~~~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~----------------~~~~p-~~~~~~k~~~ 135 (295)
|..++..+++++ ....++|++||...|+.....+..+. .+..+ ..|..+|...
T Consensus 65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~ 144 (241)
T PRK12428 65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL 144 (241)
T ss_pred HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence 334455555554 23469999999988763221111111 11122 2345999988
Q ss_pred HHHh--------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC-
Q 022578 136 ESVL--------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE- 206 (295)
Q Consensus 136 E~~~--------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~- 206 (295)
+.+. +..|++++.++||.+.++..... ....-..... +.. .+ ...+..++|+|+++..++...
T Consensus 145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~-~~~~~~~~~~-~~~-~~-----~~~~~~pe~va~~~~~l~s~~~ 216 (241)
T PRK12428 145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF-RSMLGQERVD-SDA-KR-----MGRPATADEQAAVLVFLCSDAA 216 (241)
T ss_pred HHHHHHHHHHhhhccCeEEEEeecCCccCcccccc-hhhhhhHhhh-hcc-cc-----cCCCCCHHHHHHHHHHHcChhh
Confidence 7654 23589999999999988742110 0000000000 000 01 112467899999999988643
Q ss_pred -CCCCceEEecCC
Q 022578 207 -KASRQVFNISGE 218 (295)
Q Consensus 207 -~~~~~~~~i~~~ 218 (295)
...|+.+.+.++
T Consensus 217 ~~~~G~~i~vdgg 229 (241)
T PRK12428 217 RWINGVNLPVDGG 229 (241)
T ss_pred cCccCcEEEecCc
Confidence 234666666655
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.4e-10 Score=93.76 Aligned_cols=194 Identities=13% Similarity=0.130 Sum_probs=120.0
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||++ .||..++++|+++|++|++..|+..... .. ..+.........+.+|++|.+++..++++ ..+
T Consensus 13 TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~-~~-----~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (271)
T PRK06505 13 MGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK-RV-----KPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL 86 (271)
T ss_pred eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH-HH-----HHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 78986 9999999999999999999888642211 00 01111112235789999999988887764 278
Q ss_pred cEEEEcccCCh------------------------hcHHHH----HHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEVEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~~~l----l~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .+..++ +..+....++|++||....... ...
T Consensus 87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~----------~~~ 156 (271)
T PRK06505 87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM----------PNY 156 (271)
T ss_pred CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC----------Ccc
Confidence 99999998531 012222 2333333689999987542110 111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..|+++..+.||.+-.+..... ............ .+. ..+..++|+|+
T Consensus 157 ~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~peeva~ 227 (271)
T PRK06505 157 NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRN--SPL-------RRTVTIDEVGG 227 (271)
T ss_pred chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhc--CCc-------cccCCHHHHHH
Confidence 235589998877653 3689999999999877632110 000111111111 111 12356899999
Q ss_pred HHHHHhcCCC--CCCceEEecCCc
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+++.++.... ..|..+.+.++.
T Consensus 228 ~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 228 SALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred HHHHHhCccccccCceEEeecCCc
Confidence 9999987532 357778887764
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=3e-10 Score=96.06 Aligned_cols=197 Identities=17% Similarity=0.117 Sum_probs=120.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCcc-----ccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-----AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----- 70 (295)
|||++.||..++++|+++|++|++++|+.... ..... ....++.....++.++.+|++|.+++.++++.
T Consensus 12 TGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (286)
T PRK07791 12 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQ-AVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETF 90 (286)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHH-HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 79999999999999999999999988765110 00000 00111222234678899999999888777654
Q ss_pred CCCcEEEEcccCC--------------------hhcHHHH----HHhCC-C-------CCcEEEeeccccccCCCCCCCC
Q 022578 71 KGFDVVYDINGRE--------------------ADEVEPI----LDALP-N-------LEQFIYCSSAGVYLKSDLLPHC 118 (295)
Q Consensus 71 ~~~d~vi~~a~~~--------------------~~~~~~l----l~~~~-~-------~~~~i~~Ss~~v~~~~~~~~~~ 118 (295)
..+|++||+||.. ..++..+ +..+. . ..++|++||...+....
T Consensus 91 g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----- 165 (286)
T PRK07791 91 GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV----- 165 (286)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC-----
Confidence 2789999999862 1222222 22222 1 25899999876532211
Q ss_pred CCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 119 ETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 119 e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
....|..+|...+.+.+ ..|+++..+.|| +..+. ............+ . .......
T Consensus 166 -----~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~-----~~~~~~~~~~~~~-----~--~~~~~~~ 227 (286)
T PRK07791 166 -----GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM-----TETVFAEMMAKPE-----E--GEFDAMA 227 (286)
T ss_pred -----CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc-----chhhHHHHHhcCc-----c--cccCCCC
Confidence 11235589998877653 368999999998 43221 1111111111100 1 1112457
Q ss_pred HHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 192 VKDLARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
++|+|++++.++... ...|+.+.+.++...
T Consensus 228 pedva~~~~~L~s~~~~~itG~~i~vdgG~~~ 259 (286)
T PRK07791 228 PENVSPLVVWLGSAESRDVTGKVFEVEGGKIS 259 (286)
T ss_pred HHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence 999999999998753 346777888776543
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.6e-10 Score=93.18 Aligned_cols=194 Identities=11% Similarity=0.095 Sum_probs=119.6
Q ss_pred CCc--CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
||| ++.||.+++++|+++|++|++..|.... .... .++.........+.+|++|++++.+++++ .++
T Consensus 12 TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 85 (261)
T PRK08690 12 TGMISERSIAYGIAKACREQGAELAFTYVVDKL-EERV-----RKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL 85 (261)
T ss_pred ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH-HHHH-----HHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 676 6799999999999999999987765321 1110 01111112355789999999998887754 279
Q ss_pred cEEEEcccCCh---------h----------------cH----HHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA---------D----------------EV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (295)
Q Consensus 74 d~vi~~a~~~~---------~----------------~~----~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~ 123 (295)
|++||+||... + +. +.++..++ +..++|++||...+... .
T Consensus 86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~----------~ 155 (261)
T PRK08690 86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI----------P 155 (261)
T ss_pred cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC----------C
Confidence 99999998631 1 01 11122233 33589999987643111 1
Q ss_pred CCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 124 ~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
.-..|..+|...+.+.+ ..|+++..+.||.+-.+..... ........+.+..+ ...+..++|+
T Consensus 156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~peev 226 (261)
T PRK08690 156 NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNP---------LRRNVTIEEV 226 (261)
T ss_pred CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCC---------CCCCCCHHHH
Confidence 11234589998887653 4689999999999877531110 00111111111111 1235679999
Q ss_pred HHHHHHHhcCC--CCCCceEEecCCc
Q 022578 196 ARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 196 a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
|+++..++.+. ...|..+.+.++.
T Consensus 227 A~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 227 GNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred HHHHHHHhCcccCCcceeEEEEcCCc
Confidence 99999999753 3367778777764
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.4e-10 Score=101.25 Aligned_cols=191 Identities=18% Similarity=0.170 Sum_probs=120.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||..++++|.++|++|++++|...... + ..+.. ..+..++.+|+++.+++.++++.. .+|+
T Consensus 216 tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~--l-----~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 216 TGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA--L-----AAVAN-RVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHH--H-----HHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 799999999999999999999999988533210 0 00011 124568899999999888877642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|.. ..++.++.+++. ...+||++||...+.... ....|.
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~----------~~~~Y~ 357 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR----------GQTNYA 357 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC----------CChHHH
Confidence 99999852 223444555442 336899999976542211 123355
Q ss_pred hhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.++ +..++.+..+.||.+-.+-... ......... +.+. ........+|+|+++..+
T Consensus 358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~--~~~~~~~~~--~~~~------~l~~~~~p~dva~~~~~l 427 (450)
T PRK08261 358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA--IPFATREAG--RRMN------SLQQGGLPVDVAETIAWL 427 (450)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc--cchhHHHHH--hhcC------CcCCCCCHHHHHHHHHHH
Confidence 8888766654 3468999999999875432110 010111111 1110 011223478999999998
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+... ...|+.+.++++.
T Consensus 428 ~s~~~~~itG~~i~v~g~~ 446 (450)
T PRK08261 428 ASPASGGVTGNVVRVCGQS 446 (450)
T ss_pred hChhhcCCCCCEEEECCCc
Confidence 8643 2357788887754
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-09 Score=91.14 Aligned_cols=193 Identities=10% Similarity=0.081 Sum_probs=119.3
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-c-cCCeEEEEecCCChHHHHHhhhc-----C
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----K 71 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~~~~~~~~-----~ 71 (295)
|||+ +-||.+++++|+++|++|++..|+.... ..+ .++.+ . ..++.++.+|++|++++..++++ .
T Consensus 13 tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 86 (257)
T PRK08594 13 MGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEV-----RELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG 86 (257)
T ss_pred ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHH-----HHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence 6886 8999999999999999999988753221 100 01111 1 24678899999999988877754 3
Q ss_pred CCcEEEEcccCCh------------------------hc----HHHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCC
Q 022578 72 GFDVVYDINGREA------------------------DE----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (295)
Q Consensus 72 ~~d~vi~~a~~~~------------------------~~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~ 123 (295)
.+|++||++|... .+ ++.++..+....++|++||....-. ..
T Consensus 87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~----------~~ 156 (257)
T PRK08594 87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV----------VQ 156 (257)
T ss_pred CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC----------CC
Confidence 6899999987521 01 1122333333368999998754211 01
Q ss_pred CCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 124 ~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
....|..+|+..+.+.+ ..|+++..+.||.+..+.... ............. .+ ...+..++|+
T Consensus 157 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~~v 227 (257)
T PRK08594 157 NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEER--AP-------LRRTTTQEEV 227 (257)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhc--CC-------ccccCCHHHH
Confidence 11235589999887763 358999999999987752100 0000011111110 11 1234678999
Q ss_pred HHHHHHHhcCCC--CCCceEEecCC
Q 022578 196 ARAFVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 196 a~~i~~~~~~~~--~~~~~~~i~~~ 218 (295)
|++++.++.... ..|..+.+.++
T Consensus 228 a~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 228 GDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred HHHHHHHcCcccccccceEEEECCc
Confidence 999999987532 35677777665
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=9e-10 Score=91.78 Aligned_cols=193 Identities=12% Similarity=0.077 Sum_probs=119.3
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+ +-||.+++++|+++|++|++.+|+..... .+ .++.+....+.++.+|++|.+++.+++++ ..+
T Consensus 16 tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l 89 (258)
T PRK07533 16 VGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YV-----EPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL 89 (258)
T ss_pred ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HH-----HHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence 6887 49999999999999999999988753210 00 01111113456789999999988877654 268
Q ss_pred cEEEEcccCCh------------------------hc----HHHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DE----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .+ ++.++..++...++|++||...... ....
T Consensus 90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~----------~~~~ 159 (258)
T PRK07533 90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV----------VENY 159 (258)
T ss_pred CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC----------Cccc
Confidence 99999998521 11 2223333443358999998653211 0111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..++++..+.||.+-.+-... .......+......+ ...+..++|+|+
T Consensus 160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~ 230 (258)
T PRK07533 160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAP---------LRRLVDIDDVGA 230 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCC---------cCCCCCHHHHHH
Confidence 234488998877653 368999999999887653111 001111122211111 112467899999
Q ss_pred HHHHHhcCC--CCCCceEEecCC
Q 022578 198 AFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
+++.++.+. ...|+.+.+.++
T Consensus 231 ~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 231 VAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred HHHHHhChhhccccCcEEeeCCc
Confidence 999998753 346777777665
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.8e-12 Score=102.52 Aligned_cols=192 Identities=23% Similarity=0.285 Sum_probs=126.3
Q ss_pred CcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc------CCC
Q 022578 2 GGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGF 73 (295)
Q Consensus 2 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~ 73 (295)
|++ +-||..++++|+++|++|++++|+.++....+ .++.+. .+.+++.+|+++++++..++++ ..+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~-----~~l~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~i 74 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADAL-----EELAKE-YGAEVIQCDLSDEESVEALFDEAVERFGGRI 74 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHH-----HHHHHH-TTSEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHHH-cCCceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence 566 99999999999999999999999988631111 011111 2355799999999888887654 489
Q ss_pred cEEEEcccCChh------------------------cHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~~------------------------~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+++.... +...++++ ++...++|++||...... ....
T Consensus 75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~----------~~~~ 144 (241)
T PF13561_consen 75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP----------MPGY 144 (241)
T ss_dssp SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB----------STTT
T ss_pred EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc----------Cccc
Confidence 999999876322 12222333 334468999998764221 1112
Q ss_pred CccchhhHHHHHHhh-------h-cCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~-~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
..|..+|+..+.+.+ . .|+++..|.||.+..+.... .....+........++ + .+..++|+|
T Consensus 145 ~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl---~------r~~~~~evA 215 (241)
T PF13561_consen 145 SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL---G------RLGTPEEVA 215 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT---S------SHBEHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc---C------CCcCHHHHH
Confidence 234488998887763 4 79999999999988762100 0012233333333222 1 235799999
Q ss_pred HHHHHHhcCC--CCCCceEEecCC
Q 022578 197 RAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
++++.++.+. ...|+.+.+.+|
T Consensus 216 ~~v~fL~s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 216 NAVLFLASDAASYITGQVIPVDGG 239 (241)
T ss_dssp HHHHHHHSGGGTTGTSEEEEESTT
T ss_pred HHHHHHhCccccCccCCeEEECCC
Confidence 9999999864 347888888876
|
... |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-09 Score=90.63 Aligned_cols=194 Identities=10% Similarity=0.032 Sum_probs=118.1
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||++ -||.++++.|+++|++|++..|+... .+.. .++.+......++.+|++|++++..+++. ..+
T Consensus 14 TGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~-~~~~-----~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (260)
T PRK06603 14 TGIANNMSISWAIAQLAKKHGAELWFTYQSEVL-EKRV-----KPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF 87 (260)
T ss_pred ECCCCCcchHHHHHHHHHHcCCEEEEEeCchHH-HHHH-----HHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 68886 79999999999999999998876321 1110 01111112234678999999998887754 269
Q ss_pred cEEEEcccCCh------------------------hcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+++... .+...++++ ++...++|++||....... ...
T Consensus 88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~----------~~~ 157 (260)
T PRK06603 88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVI----------PNY 157 (260)
T ss_pred cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCC----------Ccc
Confidence 99999987521 012222222 3333689999986542110 111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..|+++..+.||.+-.+.... ..............+. ..+..++|+|+
T Consensus 158 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~ 228 (260)
T PRK06603 158 NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL---------KRNTTQEDVGG 228 (260)
T ss_pred cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc---------CCCCCHHHHHH
Confidence 235589998877653 468999999999986652110 0001111111111111 12466899999
Q ss_pred HHHHHhcCC--CCCCceEEecCCc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+++.++... ...|..+.+.++.
T Consensus 229 ~~~~L~s~~~~~itG~~i~vdgG~ 252 (260)
T PRK06603 229 AAVYLFSELSKGVTGEIHYVDCGY 252 (260)
T ss_pred HHHHHhCcccccCcceEEEeCCcc
Confidence 999998753 2356777777663
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-09 Score=90.76 Aligned_cols=194 Identities=10% Similarity=0.089 Sum_probs=119.0
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+ +-||..++++|+++|++|++..|+... .+.. .++.+.......+.+|++|++++.+++++ ..+
T Consensus 16 tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 89 (272)
T PRK08159 16 LGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRV-----EPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL 89 (272)
T ss_pred ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHH-----HHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 6886 799999999999999999988775321 1100 01111113356789999999998887764 268
Q ss_pred cEEEEcccCCh------------------------hcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .++..++++ +.+..++|++||.+..... +..
T Consensus 90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~----------p~~ 159 (272)
T PRK08159 90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM----------PHY 159 (272)
T ss_pred cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC----------Ccc
Confidence 99999998521 122233333 3334689999986532110 111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..++++..+.||.+..+-... ...... ...... ..+ ...+..++|+|+
T Consensus 160 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~-~~~~~~-~~p-------~~r~~~peevA~ 230 (272)
T PRK08159 160 NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYI-LKWNEY-NAP-------LRRTVTIEEVGD 230 (272)
T ss_pred hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHH-HHHHHh-CCc-------ccccCCHHHHHH
Confidence 235589998877653 367999999999886642100 000000 000000 111 112467899999
Q ss_pred HHHHHhcCC--CCCCceEEecCCc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+++.++... ...|..+.+.++.
T Consensus 231 ~~~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 231 SALYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred HHHHHhCccccCccceEEEECCCc
Confidence 999998753 3367788888774
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.9e-10 Score=92.00 Aligned_cols=70 Identities=19% Similarity=0.192 Sum_probs=56.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|.||.+++++|+++|++|++++|+........ . ......+.+|+++.+++.+.+. ++|++||+|
T Consensus 20 TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~--------~--~~~~~~~~~D~~~~~~~~~~~~--~iDilVnnA 87 (245)
T PRK12367 20 TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN--------D--ESPNEWIKWECGKEESLDKQLA--SLDVLILNH 87 (245)
T ss_pred EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh--------c--cCCCeEEEeeCCCHHHHHHhcC--CCCEEEECC
Confidence 799999999999999999999999998863211110 0 1123578899999999998888 899999999
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
|.
T Consensus 88 G~ 89 (245)
T PRK12367 88 GI 89 (245)
T ss_pred cc
Confidence 86
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.3e-09 Score=88.54 Aligned_cols=194 Identities=14% Similarity=0.109 Sum_probs=118.6
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||++ -||+++++.|+++|++|++.+|+... .... .++....+.+..+.+|++|+++++++++. ..+
T Consensus 12 TGas~~~GIG~aia~~la~~G~~vil~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 85 (262)
T PRK07984 12 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRV-----EEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF 85 (262)
T ss_pred eCCCCCccHHHHHHHHHHHCCCEEEEEecchhH-HHHH-----HHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence 68875 89999999999999999988886311 1100 01111123466889999999999887754 258
Q ss_pred cEEEEcccCChh-------------------------cHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREAD-------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 74 d~vi~~a~~~~~-------------------------~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
|++||++|.... +...+.++ ++...++|++||.+.... ...
T Consensus 86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~----------~~~ 155 (262)
T PRK07984 86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------IPN 155 (262)
T ss_pred CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC----------CCC
Confidence 999999985210 11112222 223358999998653210 011
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|...+.+.+ ..++++..+.||.+..+.... ..............+. ..+..++|+|
T Consensus 156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva 226 (262)
T PRK07984 156 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDVG 226 (262)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC---------cCCCCHHHHH
Confidence 1234589999887763 358999999999886642110 0001111111111111 1346789999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++++.++.+. ...|..+.+.++.
T Consensus 227 ~~~~~L~s~~~~~itG~~i~vdgg~ 251 (262)
T PRK07984 227 NSAAFLCSDLSAGISGEVVHVDGGF 251 (262)
T ss_pred HHHHHHcCcccccccCcEEEECCCc
Confidence 9999998753 2357777776663
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.5e-10 Score=102.05 Aligned_cols=178 Identities=15% Similarity=0.190 Sum_probs=114.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||..++++|+++|++|+++.|+.+...... .+...++.++.+|+++++++.+++++ ..+|+
T Consensus 11 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 11 TGAAGGIGRAACQRFARAGDQVVVADRNVERARERA--------DSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999876532111 11124577899999999998888765 36999
Q ss_pred EEEcccCC----------------------hhcHHHH----HHhCC--CC-CcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE----------------------ADEVEPI----LDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 76 vi~~a~~~----------------------~~~~~~l----l~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
+||++|.. ..++..+ +..+. +. .++|++||........ ...
T Consensus 83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~----------~~~ 152 (520)
T PRK06484 83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP----------KRT 152 (520)
T ss_pred EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC----------CCc
Confidence 99999851 1122223 33332 22 3899999876542211 122
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchH-HHH-HHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWF-FHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
.|..+|+..+.+.+ ..+++++.+.||.+-.+....... ... ...... .++ ...+..++|+|+
T Consensus 153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~va~ 223 (520)
T PRK06484 153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRS--RIP-------LGRLGRPEEIAE 223 (520)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHh--cCC-------CCCCcCHHHHHH
Confidence 35589998887653 357999999999886663210000 000 000000 010 112457899999
Q ss_pred HHHHHhcC
Q 022578 198 AFVQVLGN 205 (295)
Q Consensus 198 ~i~~~~~~ 205 (295)
++..++..
T Consensus 224 ~v~~l~~~ 231 (520)
T PRK06484 224 AVFFLASD 231 (520)
T ss_pred HHHHHhCc
Confidence 99988764
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.4e-09 Score=89.34 Aligned_cols=194 Identities=13% Similarity=0.122 Sum_probs=118.1
Q ss_pred CCc--CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
||| ++-||.+++++|+++|++|++..|.... .+.+ ..+.+.......+.+|++|++++.++++. ..+
T Consensus 12 tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (260)
T PRK06997 12 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRI-----TEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL 85 (260)
T ss_pred eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHH-----HHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence 675 6799999999999999999987654221 0000 01111112344688999999999887754 369
Q ss_pred cEEEEcccCCh---------h----------------c----HHHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA---------D----------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 74 d~vi~~a~~~~---------~----------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
|++||+||... . + ++.++..+.+..++|++||....-.. ..
T Consensus 86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~----------~~ 155 (260)
T PRK06997 86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV----------PN 155 (260)
T ss_pred cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC----------CC
Confidence 99999997521 0 0 12223333334689999987642110 11
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|+..+.+.+ ..++++..+.||.+-.+-.... ......+.+... .+ ...+..++|++
T Consensus 156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~pedva 226 (260)
T PRK06997 156 YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESN--AP-------LRRNVTIEEVG 226 (260)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhc--Cc-------ccccCCHHHHH
Confidence 1235589998877653 3689999999998876421110 001111111111 11 11246789999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+++..++... ...|..+.+.++.
T Consensus 227 ~~~~~l~s~~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 227 NVAAFLLSDLASGVTGEITHVDSGF 251 (260)
T ss_pred HHHHHHhCccccCcceeEEEEcCCh
Confidence 9999998753 3467778777663
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.5e-09 Score=90.25 Aligned_cols=192 Identities=16% Similarity=0.136 Sum_probs=117.5
Q ss_pred CCc--CCcchHHHHHHHHHCCCeEEEEecCCCc-cccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CC
Q 022578 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG 72 (295)
Q Consensus 1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~ 72 (295)
||| ++-||.+++++|+++|++|++++|+... ..+.+ ..+....+.++.+|++|++++..++++ .+
T Consensus 13 tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~-------~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 13 TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERI-------AKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHH-------HHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 688 8999999999999999999999876421 11100 011123577899999999988877654 36
Q ss_pred CcEEEEcccCChh------------------------c----HHHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 73 ~d~vi~~a~~~~~------------------------~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
+|++||+||.... + ++.++..++...++|++|+....+ ...
T Consensus 86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-----------~~~ 154 (256)
T PRK07889 86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-----------WPA 154 (256)
T ss_pred CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-----------CCc
Confidence 9999999986321 1 122233333335788887543210 001
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|+..+.+.+ ..|+++..+.||.+-.+..... .............+. + +.+..++|+|
T Consensus 155 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---~-----~~~~~p~evA 226 (256)
T PRK07889 155 YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL---G-----WDVKDPTPVA 226 (256)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc---c-----cccCCHHHHH
Confidence 1123488998877653 4689999999999877632100 001111111111110 0 1346799999
Q ss_pred HHHHHHhcCC--CCCCceEEecCC
Q 022578 197 RAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
++++.++.+. ...|..+.+.++
T Consensus 227 ~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 227 RAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred HHHHHHhCcccccccceEEEEcCc
Confidence 9999998753 235677777665
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.4e-10 Score=87.20 Aligned_cols=142 Identities=18% Similarity=0.186 Sum_probs=96.8
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
+||+|++|.+++++|.++|. .|+++.|+......... ....+.....++.++.+|+++.+++.+++.+. .+|
T Consensus 6 ~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 83 (180)
T smart00822 6 TGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE--LLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLR 83 (180)
T ss_pred EcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCee
Confidence 69999999999999999986 68888887644211100 00111222346788999999998888776632 469
Q ss_pred EEEEcccC--------------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 75 VVYDINGR--------------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 75 ~vi~~a~~--------------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
.|||+++. |..++.++++++. +.+++|++||....-.. .....|..+|
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~----------~~~~~y~~sk 153 (180)
T smart00822 84 GVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN----------PGQANYAAAN 153 (180)
T ss_pred EEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC----------CCchhhHHHH
Confidence 99999974 2335667777776 66789999986542111 1112345788
Q ss_pred HHHHHHh---hhcCCcEEEeccCee
Q 022578 133 LNTESVL---ESKGVNWTSLRPVYI 154 (295)
Q Consensus 133 ~~~E~~~---~~~~~~~~i~R~~~i 154 (295)
...+.++ +..+++++.+.||.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 154 AFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred HHHHHHHHHHHhcCCceEEEeeccc
Confidence 8888776 456888888888764
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.6e-09 Score=88.92 Aligned_cols=194 Identities=11% Similarity=0.058 Sum_probs=118.9
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+ +-||..+++.|+++|++|++..|+... .+... ....+.... .++.+|++|.+++..+++. ..+
T Consensus 11 tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~----~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~i 84 (274)
T PRK08415 11 VGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVE----PIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKI 84 (274)
T ss_pred ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHH----HHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 6886 799999999999999999998887421 00000 000111123 5789999999988877754 268
Q ss_pred cEEEEcccCCh------------------------hc----HHHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DE----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .+ ++.++..+....++|++||.+..... ...
T Consensus 85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~----------~~~ 154 (274)
T PRK08415 85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYV----------PHY 154 (274)
T ss_pred CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCC----------Ccc
Confidence 99999998521 11 23333334433689999986532110 011
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..|+++..+.||.+..+..... ......... . ...+ ...+..++|+|+
T Consensus 155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~-~-~~~p-------l~r~~~pedva~ 225 (274)
T PRK08415 155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWN-E-INAP-------LKKNVSIEEVGN 225 (274)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhh-h-hhCc-------hhccCCHHHHHH
Confidence 224589998877653 4689999999999876521100 000000000 0 0011 112467899999
Q ss_pred HHHHHhcCC--CCCCceEEecCCc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+++.++... ...|..+.+.++.
T Consensus 226 ~v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 226 SGMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred HHHHHhhhhhhcccccEEEEcCcc
Confidence 999998753 3467778887764
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.7e-10 Score=96.39 Aligned_cols=72 Identities=17% Similarity=0.170 Sum_probs=58.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|+||++++++|.++|++|++++|++++..... .....++..+.+|++|.+++.+.+. ++|++||++
T Consensus 184 TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~--------~~~~~~v~~v~~Dvsd~~~v~~~l~--~IDiLInnA 253 (406)
T PRK07424 184 TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI--------NGEDLPVKTLHWQVGQEAALAELLE--KVDILIINH 253 (406)
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------hhcCCCeEEEEeeCCCHHHHHHHhC--CCCEEEECC
Confidence 799999999999999999999999998865422111 1111346788999999999999998 899999998
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
|.
T Consensus 254 Gi 255 (406)
T PRK07424 254 GI 255 (406)
T ss_pred Cc
Confidence 86
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.3e-10 Score=95.50 Aligned_cols=171 Identities=14% Similarity=0.128 Sum_probs=109.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc--CCeEEEEecCCC--hHHHH---HhhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKD--YDFVK---SSLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~--~~~~~---~~~~~~~~ 73 (295)
|||+|.||.+++++|+++|++|++++|++++..+.. .++.+.. .++..+.+|+++ .+.++ +.+...++
T Consensus 59 TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~di 133 (320)
T PLN02780 59 TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVS-----DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDV 133 (320)
T ss_pred eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----HHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCc
Confidence 799999999999999999999999999876632211 1112111 256778899985 33333 33443356
Q ss_pred cEEEEcccCCh----------------------hcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA----------------------DEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~----------------------~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .++..+. ..+. +..++|++||...+.... .+..
T Consensus 134 dilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~--------~p~~ 205 (320)
T PLN02780 134 GVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS--------DPLY 205 (320)
T ss_pred cEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC--------Cccc
Confidence 79999998521 1222333 3332 567999999977542100 0111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..|..+|+..+.+.+ ..|++++.+.||.+-.+-.. . .... .....++++|+.
T Consensus 206 ~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----------~-~~~~----------~~~~~p~~~A~~ 264 (320)
T PLN02780 206 AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----------I-RRSS----------FLVPSSDGYARA 264 (320)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----------c-cCCC----------CCCCCHHHHHHH
Confidence 235589999887652 35899999999998766210 0 0000 013568999999
Q ss_pred HHHHhcC
Q 022578 199 FVQVLGN 205 (295)
Q Consensus 199 i~~~~~~ 205 (295)
++..+..
T Consensus 265 ~~~~~~~ 271 (320)
T PLN02780 265 ALRWVGY 271 (320)
T ss_pred HHHHhCC
Confidence 9998864
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.6e-10 Score=92.91 Aligned_cols=185 Identities=14% Similarity=0.067 Sum_probs=111.5
Q ss_pred CCcCCcchHHHHHHHHH----CCCeEEEEecCCCccccCCCCCCchhhhh--ccCCeEEEEecCCChHHHHHhhhcC---
Q 022578 1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK--- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~--- 71 (295)
|||++.||.+++++|++ .|++|+++.|+.+...+.. .++.. ...++.++.+|+++.+++.++++..
T Consensus 6 tGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 6 TGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLK-----AEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred ecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHH-----HHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 79999999999999997 7999999999876532111 11111 1235888999999999888776531
Q ss_pred ------CCcEEEEcccCCh------------h-----------c----HHHHHHhCC-C---CCcEEEeeccccccCCCC
Q 022578 72 ------GFDVVYDINGREA------------D-----------E----VEPILDALP-N---LEQFIYCSSAGVYLKSDL 114 (295)
Q Consensus 72 ------~~d~vi~~a~~~~------------~-----------~----~~~ll~~~~-~---~~~~i~~Ss~~v~~~~~~ 114 (295)
+.|++||+||... + + ++.++..++ . ..++|++||...+....
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~- 159 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK- 159 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC-
Confidence 2368999988521 0 1 223334443 1 25899999976532111
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCcee
Q 022578 115 LPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT 187 (295)
Q Consensus 115 ~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (295)
....|..+|...+.+.+ ..++.+..+.||.+-.+.. ..+............+.......
T Consensus 160 ---------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 225 (256)
T TIGR01500 160 ---------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQ-----QQVREESVDPDMRKGLQELKAKG 225 (256)
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHH-----HHHHHhcCChhHHHHHHHHHhcC
Confidence 11224589999887763 3578999999998866521 11100000000000000000011
Q ss_pred eeeeHHHHHHHHHHHhcC
Q 022578 188 QLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 188 ~~i~~~D~a~~i~~~~~~ 205 (295)
.+..++|+|++++.++.+
T Consensus 226 ~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 226 KLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred CCCCHHHHHHHHHHHHhc
Confidence 256799999999999864
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.3e-09 Score=88.70 Aligned_cols=179 Identities=19% Similarity=0.215 Sum_probs=115.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-CCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||++.||..++++|. +|++|++++|+.++..+. ..++.+.. ..+.++.+|++|++++++++++ ..+|
T Consensus 6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGL-----ASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHH-----HHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 6999999999999998 599999999987653211 11112222 2478899999999888877654 2689
Q ss_pred EEEEcccCChh--------------------cH----HHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~~~--------------------~~----~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
++||++|.... +. +.++..+. + ..++|++||...+-.. .....
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----------~~~~~ 149 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR----------RANYV 149 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC----------cCCcc
Confidence 99999986210 11 12223332 2 4689999997643111 11123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|+..+.+.+ ..++++..+.||.+..+.. .+.. +.. -...++|+|++++
T Consensus 150 Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~-------------~~~~---~~~-----~~~~pe~~a~~~~ 208 (246)
T PRK05599 150 YGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT-------------TGMK---PAP-----MSVYPRDVAAAVV 208 (246)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh-------------cCCC---CCC-----CCCCHHHHHHHHH
Confidence 4588988776652 3678999999998776521 0100 000 0246899999999
Q ss_pred HHhcCCCCCCceEEecC
Q 022578 201 QVLGNEKASRQVFNISG 217 (295)
Q Consensus 201 ~~~~~~~~~~~~~~i~~ 217 (295)
.++..+.. ++.+.+.+
T Consensus 209 ~~~~~~~~-~~~~~~~~ 224 (246)
T PRK05599 209 SAITSSKR-STTLWIPG 224 (246)
T ss_pred HHHhcCCC-CceEEeCc
Confidence 99987543 33455544
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.07 E-value=9.1e-09 Score=78.64 Aligned_cols=192 Identities=16% Similarity=0.172 Sum_probs=124.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+.-||+++++.|.++|++|.+.+++.....+.... +.. ..+-.-+.||+++.+++...|++ -.|++
T Consensus 20 tGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~-----L~g-~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 20 TGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGD-----LGG-YGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred ecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhh-----cCC-CCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 69999999999999999999999999887653222111 011 12455688999998877775554 28999
Q ss_pred EEEcccCChhc------------------------HHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~~~~------------------------~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
++||||++.++ ++..++++- +.-++|.+||+----+..+ ..+
T Consensus 94 lVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G----------Qtn 163 (256)
T KOG1200|consen 94 LVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG----------QTN 163 (256)
T ss_pred EEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc----------chh
Confidence 99999985332 233333311 3348999998532111111 112
Q ss_pred cc--------hhhHHHHHHhhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RH--------KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~--------~~k~~~E~~~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|. -+|.++ +.+...++++..+-||.|-.|-. ....+.+.+.+...-|....|+ .+|+|..+
T Consensus 164 YAAsK~GvIgftktaA-rEla~knIrvN~VlPGFI~tpMT-~~mp~~v~~ki~~~iPmgr~G~---------~EevA~~V 232 (256)
T KOG1200|consen 164 YAASKGGVIGFTKTAA-RELARKNIRVNVVLPGFIATPMT-EAMPPKVLDKILGMIPMGRLGE---------AEEVANLV 232 (256)
T ss_pred hhhhcCceeeeeHHHH-HHHhhcCceEeEeccccccChhh-hhcCHHHHHHHHccCCccccCC---------HHHHHHHH
Confidence 22 234433 44467789999999999888732 2234556666666655543343 89999999
Q ss_pred HHHhcCCCC--CCceEEecCCc
Q 022578 200 VQVLGNEKA--SRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~~~--~~~~~~i~~~~ 219 (295)
+.+..+... .|..+.+.++-
T Consensus 233 ~fLAS~~ssYiTG~t~evtGGl 254 (256)
T KOG1200|consen 233 LFLASDASSYITGTTLEVTGGL 254 (256)
T ss_pred HHHhccccccccceeEEEeccc
Confidence 998865332 46778877763
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.6e-09 Score=92.82 Aligned_cols=191 Identities=14% Similarity=0.114 Sum_probs=114.0
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||++.||.+++++|+++| ++|++++|+.++..+... .+......+.++.+|+++.+++..+++. .++|
T Consensus 9 TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD 83 (314)
T TIGR01289 9 TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAK-----SLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD 83 (314)
T ss_pred ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-----HhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 7999999999999999999 999999998765321110 1111124578899999999888877754 2699
Q ss_pred EEEEcccCCh---------------------hc----HHHHHHhCC-C---CCcEEEeeccccccCCC----CCCC----
Q 022578 75 VVYDINGREA---------------------DE----VEPILDALP-N---LEQFIYCSSAGVYLKSD----LLPH---- 117 (295)
Q Consensus 75 ~vi~~a~~~~---------------------~~----~~~ll~~~~-~---~~~~i~~Ss~~v~~~~~----~~~~---- 117 (295)
++||+||... .+ ++.++..++ . ..++|++||...+.... ..+.
T Consensus 84 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~ 163 (314)
T TIGR01289 84 ALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGD 163 (314)
T ss_pred EEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccc
Confidence 9999998521 11 233344443 2 36999999987653210 0000
Q ss_pred --------------CCCCCCCCC-ccchhhHHHHHHh----h----hcCCcEEEeccCeeec-CCCCC-c-hHHHHHHHH
Q 022578 118 --------------CETDTVDPK-SRHKGKLNTESVL----E----SKGVNWTSLRPVYIYG-PLNYN-P-VEEWFFHRL 171 (295)
Q Consensus 118 --------------~e~~~~~p~-~~~~~k~~~E~~~----~----~~~~~~~i~R~~~i~g-~~~~~-~-~~~~~~~~~ 171 (295)
.+..+..+. .|..+|++...+. + ..++.++.++||.+.. +.... . ....+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~ 243 (314)
T TIGR01289 164 LSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPF 243 (314)
T ss_pred cccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHH
Confidence 011111222 2448999854433 2 1478999999999853 32111 1 111111111
Q ss_pred HcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
.. ... ..+.++++.|+.++.++...
T Consensus 244 ~~---~~~-------~~~~~~~~~a~~l~~~~~~~ 268 (314)
T TIGR01289 244 QK---YIT-------KGYVSEEEAGERLAQVVSDP 268 (314)
T ss_pred HH---HHh-------ccccchhhhhhhhHHhhcCc
Confidence 00 000 02367889999999887653
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.8e-09 Score=88.55 Aligned_cols=192 Identities=13% Similarity=0.045 Sum_probs=112.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCC---CC--CCchhhhhccCCeEEEEecCCChHHHHHhhhc-----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL---PG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----- 70 (295)
|||++.||.+++++|++.|++|++++|+........ .. .....+.....++.++.+|+++++++++++++
T Consensus 14 TGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 93 (305)
T PRK08303 14 AGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQ 93 (305)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 799999999999999999999999999854311000 00 00111222223577899999999988887764
Q ss_pred CCCcEEEEcc-cCC------h------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCC
Q 022578 71 KGFDVVYDIN-GRE------A------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE 119 (295)
Q Consensus 71 ~~~d~vi~~a-~~~------~------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e 119 (295)
..+|++||++ |.. . .+ ++.++..+. +..++|++||....-... +
T Consensus 94 g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~--~--- 168 (305)
T PRK08303 94 GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT--H--- 168 (305)
T ss_pred CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc--C---
Confidence 2689999998 631 0 01 222333343 346899999854311000 0
Q ss_pred CCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCc-ccCCCCCceeeeee
Q 022578 120 TDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGH 191 (295)
Q Consensus 120 ~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~ 191 (295)
......|..+|.....+.+ ..|+++..+.||.+-.+.. ..... ...... ..........-+..
T Consensus 169 --~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~-----~~~~~--~~~~~~~~~~~~~p~~~~~~~ 239 (305)
T PRK08303 169 --YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMM-----LDAFG--VTEENWRDALAKEPHFAISET 239 (305)
T ss_pred --CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHH-----HHhhc--cCccchhhhhccccccccCCC
Confidence 0011225589998877653 3579999999998765410 00000 000000 00000000112346
Q ss_pred HHHHHHHHHHHhcCC
Q 022578 192 VKDLARAFVQVLGNE 206 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~ 206 (295)
++|+|++++.++.++
T Consensus 240 peevA~~v~fL~s~~ 254 (305)
T PRK08303 240 PRYVGRAVAALAADP 254 (305)
T ss_pred HHHHHHHHHHHHcCc
Confidence 899999999998764
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.7e-09 Score=89.22 Aligned_cols=142 Identities=22% Similarity=0.149 Sum_probs=96.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccC-CeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSS-KILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~-~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
||||..||.+++.+|.++|.+++.+.|......... .++ +.... ++.++++|++|.+++.++++. .++
T Consensus 18 TGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~-----~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~v 92 (282)
T KOG1205|consen 18 TGASSGIGEALAYELAKRGAKLVLVARRARRLERVA-----EELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRV 92 (282)
T ss_pred eCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHH-----HHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999998888887766632110 011 11123 499999999999999877633 399
Q ss_pred cEEEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|++||.||.. .-+ |+.++..++ +..|+|.+||+.-+-..+ ....
T Consensus 93 DvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P----------~~~~ 162 (282)
T KOG1205|consen 93 DVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP----------FRSI 162 (282)
T ss_pred CEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC----------cccc
Confidence 9999999972 222 555666666 548999999988542211 1114
Q ss_pred cchhhHHHHHHhh----h---cCCcEE-EeccCeeecC
Q 022578 128 RHKGKLNTESVLE----S---KGVNWT-SLRPVYIYGP 157 (295)
Q Consensus 128 ~~~~k~~~E~~~~----~---~~~~~~-i~R~~~i~g~ 157 (295)
|..+|.+.+.+.. + .+..+. .+-||.|-..
T Consensus 163 Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te 200 (282)
T KOG1205|consen 163 YSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE 200 (282)
T ss_pred cchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence 5699999887762 2 222122 4777776554
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.1e-09 Score=93.55 Aligned_cols=191 Identities=16% Similarity=0.117 Sum_probs=112.1
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||++.||.+++++|+++| ++|++..|+.+....... ++.....++.++.+|++|.++++.++++ ..+|
T Consensus 3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD 77 (308)
T PLN00015 3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAK-----SAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD 77 (308)
T ss_pred eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-----HhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence 7999999999999999999 999999988654221110 0111123578889999999988777753 2689
Q ss_pred EEEEcccCCh---------------------hc----HHHHHHhCC--C--CCcEEEeeccccccCCC-C--CC---C--
Q 022578 75 VVYDINGREA---------------------DE----VEPILDALP--N--LEQFIYCSSAGVYLKSD-L--LP---H-- 117 (295)
Q Consensus 75 ~vi~~a~~~~---------------------~~----~~~ll~~~~--~--~~~~i~~Ss~~v~~~~~-~--~~---~-- 117 (295)
++||+||... .+ ++.++..+. + ..++|++||...+-... + .+ +
T Consensus 78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~ 157 (308)
T PLN00015 78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD 157 (308)
T ss_pred EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence 9999998621 01 233444443 3 46999999976531100 0 00 0
Q ss_pred -----------------CCCCCCCC-CccchhhHHHHHHh----hh----cCCcEEEeccCeeec-CCCCCchHHHHHHH
Q 022578 118 -----------------CETDTVDP-KSRHKGKLNTESVL----ES----KGVNWTSLRPVYIYG-PLNYNPVEEWFFHR 170 (295)
Q Consensus 118 -----------------~e~~~~~p-~~~~~~k~~~E~~~----~~----~~~~~~i~R~~~i~g-~~~~~~~~~~~~~~ 170 (295)
++. ...+ ..|..+|+..+.+. ++ .|+.++.+.||++.. +-..... .. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~-~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~-~~-~~~ 234 (308)
T PLN00015 158 LRGLAGGLNGLNSSAMIDGG-EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHI-PL-FRL 234 (308)
T ss_pred hhhhhcccCCccchhhcccc-CCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccccc-HH-HHH
Confidence 000 1112 22448999744432 22 479999999999853 3211100 10 010
Q ss_pred HHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
... .....+. ..+..+++.|+.++.++..
T Consensus 235 ~~~-~~~~~~~-----~~~~~pe~~a~~~~~l~~~ 263 (308)
T PLN00015 235 LFP-PFQKYIT-----KGYVSEEEAGKRLAQVVSD 263 (308)
T ss_pred HHH-HHHHHHh-----cccccHHHhhhhhhhhccc
Confidence 000 0000000 1235689999999988765
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-08 Score=84.69 Aligned_cols=202 Identities=16% Similarity=0.156 Sum_probs=126.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc------CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d 74 (295)
|||+.-||+++++.|++.|.+|++..|+.+........... ......++..+.+|+++.+..+++++. .++|
T Consensus 14 TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gkid 91 (270)
T KOG0725|consen 14 TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGG--LGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKID 91 (270)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCC
Confidence 79999999999999999999999999998863221110000 000024588999999987666555432 3799
Q ss_pred EEEEcccCCh---------------------h-cHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 75 VVYDINGREA---------------------D-EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 75 ~vi~~a~~~~---------------------~-~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
++||.+|.+. . ....+..++ + +...++++||..-+... ...+.
T Consensus 92 iLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~---------~~~~~ 162 (270)
T KOG0725|consen 92 ILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG---------PGSGV 162 (270)
T ss_pred EEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC---------CCCcc
Confidence 9999998732 2 122222222 2 45688888887643211 11123
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchH----HHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
.|..+|...+++.+ ..|+++..+-||.+..+....... ..+........ ..| .-.+..++|+
T Consensus 163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~~p-----~gr~g~~~ev 235 (270)
T KOG0725|consen 163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKG--AVP-----LGRVGTPEEV 235 (270)
T ss_pred cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccc--ccc-----cCCccCHHHH
Confidence 34599999998864 578999999999999885211111 11111100011 111 1234668999
Q ss_pred HHHHHHHhcCCC--CCCceEEecCCcc
Q 022578 196 ARAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 196 a~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
++++..++.++. ..|+.+.+.++..
T Consensus 236 a~~~~fla~~~asyitG~~i~vdgG~~ 262 (270)
T KOG0725|consen 236 AEAAAFLASDDASYITGQTIIVDGGFT 262 (270)
T ss_pred HHhHHhhcCcccccccCCEEEEeCCEE
Confidence 999999887642 3566777766643
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.1e-09 Score=86.05 Aligned_cols=139 Identities=8% Similarity=0.092 Sum_probs=95.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----C-CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K-GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~-~~d 74 (295)
|||++-||..++++|+++|++|+++.|+.+...+.. ..+.+...++..+.+|+++++++.+++++ . .+|
T Consensus 11 tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~-----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD 85 (227)
T PRK08862 11 TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTY-----EQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD 85 (227)
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence 799999999999999999999999999876532211 01122234577888999999998877754 2 699
Q ss_pred EEEEcccCCh----------h-----------c----HHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 75 VVYDINGREA----------D-----------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 75 ~vi~~a~~~~----------~-----------~----~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
++||++|... + + .+.++..+. + ..++|++||...+ ....
T Consensus 86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-------------~~~~ 152 (227)
T PRK08862 86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-------------QDLT 152 (227)
T ss_pred EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-------------CCcc
Confidence 9999997310 0 1 111223332 2 4689999985432 0112
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecC
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~ 157 (295)
.|..+|+..+.+.+ ..++++..+.||.+-.+
T Consensus 153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 35588998877653 46899999999987776
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.4e-08 Score=81.04 Aligned_cols=173 Identities=15% Similarity=0.198 Sum_probs=117.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.+|+.++.+|+++|..+.+.+.+.....+... +.... .++....||+++++++.+..++ .++|+
T Consensus 44 TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~-----~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I 117 (300)
T KOG1201|consen 44 TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVK-----EIRKI-GEAKAYTCDISDREEIYRLAKKVKKEVGDVDI 117 (300)
T ss_pred eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHH-----HHHhc-CceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence 7999999999999999999999898988877433221 11111 3688999999999888776654 38999
Q ss_pred EEEcccC--------------------Chhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGR--------------------EADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~--------------------~~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||.||+ |..+ ++.++..+. +..|+|.++|..-+-+ +..-.+|-
T Consensus 118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g----------~~gl~~Yc 187 (300)
T KOG1201|consen 118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFG----------PAGLADYC 187 (300)
T ss_pred EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccC----------Cccchhhh
Confidence 9999997 2222 444454444 7789999999765322 22223455
Q ss_pred hhhHHHHHHh-------h---hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 130 KGKLNTESVL-------E---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 130 ~~k~~~E~~~-------~---~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.+|..+.-+. + ..+++.+.+.|+.+=.. ++ ++ ..+ -....+.+.++.+|+.|
T Consensus 188 aSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg---------mf----~~-~~~----~~~l~P~L~p~~va~~I 249 (300)
T KOG1201|consen 188 ASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG---------MF----DG-ATP----FPTLAPLLEPEYVAKRI 249 (300)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc---------cc----CC-CCC----CccccCCCCHHHHHHHH
Confidence 8888764332 2 24688999998764311 11 12 111 12445778899999999
Q ss_pred HHHhcCCC
Q 022578 200 VQVLGNEK 207 (295)
Q Consensus 200 ~~~~~~~~ 207 (295)
+..+..++
T Consensus 250 v~ai~~n~ 257 (300)
T KOG1201|consen 250 VEAILTNQ 257 (300)
T ss_pred HHHHHcCC
Confidence 99987654
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-08 Score=80.37 Aligned_cols=140 Identities=21% Similarity=0.228 Sum_probs=89.4
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|-+|..++++|.+++ .+|+++.|++....... ....++.+....+.++.+|++|++++.++++.. .++
T Consensus 6 tGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~--~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~ 83 (181)
T PF08659_consen 6 TGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAE--AAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPID 83 (181)
T ss_dssp ETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHH--HHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EE
T ss_pred ECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHH--HHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcc
Confidence 6999999999999999996 48999999942211100 011122333467999999999999999999763 568
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhCC--CCCcEEEeecccc-ccCCCCCCCCCCCCCCCCccchh
Q 022578 75 VVYDINGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
.|||+++.. +.++.+|.+++. ....||.+||... +|... ...|...
T Consensus 84 gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g-----------q~~YaaA 152 (181)
T PF08659_consen 84 GVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG-----------QSAYAAA 152 (181)
T ss_dssp EEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT-----------BHHHHHH
T ss_pred eeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc-----------hHhHHHH
Confidence 899999872 235778888876 7889999999764 44321 1234355
Q ss_pred hHHHHHHh---hhcCCcEEEeccCe
Q 022578 132 KLNTESVL---ESKGVNWTSLRPVY 153 (295)
Q Consensus 132 k~~~E~~~---~~~~~~~~i~R~~~ 153 (295)
....+.+. +..+.+++.+.-+.
T Consensus 153 N~~lda~a~~~~~~g~~~~sI~wg~ 177 (181)
T PF08659_consen 153 NAFLDALARQRRSRGLPAVSINWGA 177 (181)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred HHHHHHHHHHHHhCCCCEEEEEccc
Confidence 55555554 45678888777653
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.3e-09 Score=79.64 Aligned_cols=126 Identities=20% Similarity=0.172 Sum_probs=85.4
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecC--CCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG--KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~ 72 (295)
|||+|-||..++++|+++ ++.|+++.|+ .+...+. ..++.....++.++++|+++.++++.+++. ..
T Consensus 6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 6 TGASSGIGRALARALARRGARVVILTSRSEDSEGAQEL-----IQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH-----HHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred ECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccc-----ccccccccccccccccccccccccccccccccccccc
Confidence 699999999999999999 4688888888 2221111 111223346789999999999888887765 37
Q ss_pred CcEEEEcccCChh--------------------cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 73 FDVVYDINGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 73 ~d~vi~~a~~~~~--------------------~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+|++||++|.... +...+.+++. +..++|++||....-+.+ ....|..
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~~~Y~a 150 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSP----------GMSAYSA 150 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSST----------TBHHHHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCC----------CChhHHH
Confidence 8999999987321 2222333332 677999999987642211 1122448
Q ss_pred hhHHHHHHhhh
Q 022578 131 GKLNTESVLES 141 (295)
Q Consensus 131 ~k~~~E~~~~~ 141 (295)
+|+..+.+.+.
T Consensus 151 skaal~~~~~~ 161 (167)
T PF00106_consen 151 SKAALRGLTQS 161 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998887653
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.2e-07 Score=77.84 Aligned_cols=200 Identities=8% Similarity=-0.066 Sum_probs=112.4
Q ss_pred CCc--CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc---hhhhhcc-----CCeEEEEecC--CCh-------
Q 022578 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD---QEFAEFS-----SKILHLKGDR--KDY------- 61 (295)
Q Consensus 1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~-----~~v~~~~~D~--~~~------- 61 (295)
||| +.-||..+++.|.++|.+|++ .|......+....... .+..... .....+.+|+ .++
T Consensus 15 TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 93 (303)
T PLN02730 15 AGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDV 93 (303)
T ss_pred eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhh
Confidence 788 799999999999999999988 6554332111000000 0000000 1145677888 322
Q ss_pred -----------HHHHHhhhc-----CCCcEEEEcccCC----------------------hhc----HHHHHHhCCCCCc
Q 022578 62 -----------DFVKSSLSA-----KGFDVVYDINGRE----------------------ADE----VEPILDALPNLEQ 99 (295)
Q Consensus 62 -----------~~~~~~~~~-----~~~d~vi~~a~~~----------------------~~~----~~~ll~~~~~~~~ 99 (295)
+++..+++. -.+|++||+||.. ..+ ++.++..+....+
T Consensus 94 ~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~ 173 (303)
T PLN02730 94 KTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGA 173 (303)
T ss_pred hcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence 255555543 2689999999631 112 2333333443379
Q ss_pred EEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------h-cCCcEEEeccCeeecCCCCCc-hHHHHHHH
Q 022578 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNP-VEEWFFHR 170 (295)
Q Consensus 100 ~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~-~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~ 170 (295)
+|++||....... +.....|..+|+..+.+.+ . .++++..+-||.+-.+-.... ........
T Consensus 174 II~isS~a~~~~~---------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~ 244 (303)
T PLN02730 174 SISLTYIASERII---------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEY 244 (303)
T ss_pred EEEEechhhcCCC---------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHH
Confidence 9999987642110 0000125589998887752 2 579999999998877632110 00111111
Q ss_pred HHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
.... .+. ..+..++|++.+++.++... ...|+.+.+.++.
T Consensus 245 ~~~~--~pl-------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~ 286 (303)
T PLN02730 245 SYAN--APL-------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL 286 (303)
T ss_pred HHhc--CCC-------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence 1111 111 12356899999999998753 2357777776653
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.7e-08 Score=75.43 Aligned_cols=134 Identities=16% Similarity=0.083 Sum_probs=96.7
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc------CCCcE
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFDV 75 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d~ 75 (295)
++.|.||.++++.|.+.|+.|++..|+.+. ...+. +..++...+.|+++++.+.+.... -+.|.
T Consensus 15 cs~GGIG~ala~ef~~~G~~V~AtaR~~e~-M~~L~---------~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 15 CSSGGIGYALAKEFARNGYLVYATARRLEP-MAQLA---------IQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCcchhHHHHHHHHhCCeEEEEEccccch-HhhHH---------HhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 678999999999999999999999999877 33222 125788999999999988876643 37899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCc--c
Q 022578 76 VYDINGR--------------------EADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS--R 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~--~ 128 (295)
+||.||. |+-+..++.++. . ....+|++.|..++-. .|.. |
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp------------fpf~~iY 152 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP------------FPFGSIY 152 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec------------cchhhhh
Confidence 9999886 233333333332 2 5568999999877521 1222 3
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecC
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~ 157 (295)
..+|++...+. +-.|++++.+-+|.|-..
T Consensus 153 sAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~ 188 (289)
T KOG1209|consen 153 SASKAAIHAYARTLRLELKPFGVRVINAITGGVATD 188 (289)
T ss_pred hHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence 48999887774 346888888888876654
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.72 E-value=7.3e-08 Score=81.70 Aligned_cols=152 Identities=20% Similarity=0.096 Sum_probs=100.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh--hccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA--EFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+..||..+++.|+.+|.+|+...|+.+...+... .+. ....++.++++|+++.+++++..+. ...
T Consensus 41 TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~-----~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~l 115 (314)
T KOG1208|consen 41 TGATSGIGFETARELALRGAHVVLACRNEERGEEAKE-----QIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPL 115 (314)
T ss_pred ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCc
Confidence 7999999999999999999999999999855322111 111 1124678899999999888877654 378
Q ss_pred cEEEEcccCC------------------hhc----HHHHHHhCC--CCCcEEEeeccccccC--CCCCCCCCCCC-CCCC
Q 022578 74 DVVYDINGRE------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDT-VDPK 126 (295)
Q Consensus 74 d~vi~~a~~~------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~--~~~~~~~e~~~-~~p~ 126 (295)
|+.|+.||+. .-+ +..|++.++ ...|+|++||..- +. .......|... ....
T Consensus 116 dvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~~~ 194 (314)
T KOG1208|consen 116 DVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYSSD 194 (314)
T ss_pred cEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCccch
Confidence 9999999972 112 455666666 2279999999664 11 11111111111 1111
Q ss_pred c-cchhhHHHHHHh----hh--cCCcEEEeccCeeecCC
Q 022578 127 S-RHKGKLNTESVL----ES--KGVNWTSLRPVYIYGPL 158 (295)
Q Consensus 127 ~-~~~~k~~~E~~~----~~--~~~~~~i~R~~~i~g~~ 158 (295)
. |..+|.+...+. +. .|+.+..+-||.+..+.
T Consensus 195 ~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 195 AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 1 447777654332 22 27999999999998884
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.2e-07 Score=71.85 Aligned_cols=137 Identities=19% Similarity=0.205 Sum_probs=96.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+..||..++++|.+.|-+|++..|+.+...+. .+..+.+..+.||+.|.++.+++++. -..++
T Consensus 11 TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~---------~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 11 TGGASGIGLALAKRFLELGNTVIICGRNEERLAEA---------KAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV 81 (245)
T ss_pred eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHH---------HhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence 79999999999999999999999999998874332 22347888899999998766655543 27899
Q ss_pred EEEcccCCh----------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGREA----------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~~----------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||+||+.. .+ +..++..+. ....+|.+||--.|- |....+
T Consensus 82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv-----------Pm~~~P 150 (245)
T COG3967 82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV-----------PMASTP 150 (245)
T ss_pred eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC-----------cccccc
Confidence 999999721 11 222333333 456899999866542 122223
Q ss_pred cc-hhhHHHHHH-------hhhcCCcEEEeccCeeecC
Q 022578 128 RH-KGKLNTESV-------LESKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 128 ~~-~~k~~~E~~-------~~~~~~~~~i~R~~~i~g~ 157 (295)
-| .+|+....+ ++..+++++-+-|+.|-.+
T Consensus 151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 34 677766544 3556899999999888764
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.1e-07 Score=69.65 Aligned_cols=192 Identities=13% Similarity=0.172 Sum_probs=121.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc--CCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
||+.|.||..+..+|+++|..+.++..+.+...+. .++.+.. ..+.|+++|+++..+++++|++ ..+
T Consensus 11 tggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~------akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i 84 (261)
T KOG4169|consen 11 TGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI------AKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI 84 (261)
T ss_pred ecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH------HHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence 69999999999999999999988887766653211 1222222 4688999999999999888876 388
Q ss_pred cEEEEcccCCh----------------hcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 74 DVVYDINGREA----------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 74 d~vi~~a~~~~----------------~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
|++||.||... .++...+..+. ...-+|..||..-+.+.+-.| -|..+|
T Consensus 85 DIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~p----------VY~AsK 154 (261)
T KOG4169|consen 85 DILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFP----------VYAASK 154 (261)
T ss_pred EEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccch----------hhhhcc
Confidence 99999999832 24555666665 234688898754321111111 012333
Q ss_pred HH---------HHHHhhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHc-CCCcccCCC----CCceeeeeeHHHHHHH
Q 022578 133 LN---------TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPGS----GIQVTQLGHVKDLARA 198 (295)
Q Consensus 133 ~~---------~E~~~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~i~~~D~a~~ 198 (295)
+- -+.+.++.|+++..+.||.+-. .++..+.+ +....+ ++ .-.....-+..+++..
T Consensus 155 aGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t---------~l~~~~~~~~~~~e~-~~~~~~~l~~~~~q~~~~~a~~ 224 (261)
T KOG4169|consen 155 AGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRT---------DLAENIDASGGYLEY-SDSIKEALERAPKQSPACCAIN 224 (261)
T ss_pred cceeeeehhhhhhhhHhhcCEEEEEECCCcchH---------HHHHHHHhcCCcccc-cHHHHHHHHHcccCCHHHHHHH
Confidence 32 2444578899999999976322 23333322 221111 00 0011223557889999
Q ss_pred HHHHhcCCCCCCceEEecCCc
Q 022578 199 FVQVLGNEKASRQVFNISGEK 219 (295)
Q Consensus 199 i~~~~~~~~~~~~~~~i~~~~ 219 (295)
++.+++.+ -+|.+|-+..+.
T Consensus 225 ~v~aiE~~-~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 225 IVNAIEYP-KNGAIWKVDSGS 244 (261)
T ss_pred HHHHHhhc-cCCcEEEEecCc
Confidence 99999884 457788887764
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.9e-07 Score=75.19 Aligned_cols=180 Identities=19% Similarity=0.171 Sum_probs=116.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+.-+|..++..+..+|++|+++.|+..+..+.... .++..+...|.+..+|+.|.+++...++.. -+|.
T Consensus 39 tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~---l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~ 115 (331)
T KOG1210|consen 39 TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAE---LELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDN 115 (331)
T ss_pred ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhh---hhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcce
Confidence 69999999999999999999999999998885433221 122333344779999999999999888865 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC---CCCcEEEeecccc-ccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP---NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~---~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~p~~ 127 (295)
+|||||.. --++.|.+.+ ++ +..+++.+||... ++-. .-..
T Consensus 116 l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~-----------Gysa 184 (331)
T KOG1210|consen 116 LFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIY-----------GYSA 184 (331)
T ss_pred EEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcc-----------cccc
Confidence 99999972 2234444433 44 3448888888543 1110 0111
Q ss_pred cchhhHH----HHHH---hhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCc--ccCCCCCceeeeeeHHHHHHH
Q 022578 128 RHKGKLN----TESV---LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI--PIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 128 ~~~~k~~----~E~~---~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~D~a~~ 198 (295)
|..+|.. ++.+ +..+++.++..-|+.+-.|+.... .+.+|. .+.. ...+.+..+++|++
T Consensus 185 Ys~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E---------n~tkP~~t~ii~---g~ss~~~~e~~a~~ 252 (331)
T KOG1210|consen 185 YSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE---------NKTKPEETKIIE---GGSSVIKCEEMAKA 252 (331)
T ss_pred cccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc---------cccCchheeeec---CCCCCcCHHHHHHH
Confidence 2234443 3332 345789999999998888753110 011221 1111 22344889999999
Q ss_pred HHHHhcCC
Q 022578 199 FVQVLGNE 206 (295)
Q Consensus 199 i~~~~~~~ 206 (295)
++.=+.+.
T Consensus 253 ~~~~~~rg 260 (331)
T KOG1210|consen 253 IVKGMKRG 260 (331)
T ss_pred HHhHHhhc
Confidence 99877764
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-06 Score=68.70 Aligned_cols=179 Identities=18% Similarity=0.207 Sum_probs=112.6
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEe-cCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-------C
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~ 71 (295)
|||+-.||-.|+++|++. |.++++.+ |++++....+ +......+++++++.|+++.+++.++.++ .
T Consensus 9 tGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l-----~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 9 TGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATEL-----ALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred eccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHH-----HHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 799999999999999976 66665544 5466631111 11122358999999999998888777654 4
Q ss_pred CCcEEEEcccC---------------------Chhc----HH---HHHHhCC----------CCCcEEEeeccccccCCC
Q 022578 72 GFDVVYDINGR---------------------EADE----VE---PILDALP----------NLEQFIYCSSAGVYLKSD 113 (295)
Q Consensus 72 ~~d~vi~~a~~---------------------~~~~----~~---~ll~~~~----------~~~~~i~~Ss~~v~~~~~ 113 (295)
+.+++|++||. |..+ ++ .|+..++ ....+|++||.+.--
T Consensus 84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~--- 160 (249)
T KOG1611|consen 84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI--- 160 (249)
T ss_pred CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc---
Confidence 88999999987 1111 22 2232222 224799999876420
Q ss_pred CCCCCCCCCCCCCc-cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCc
Q 022578 114 LLPHCETDTVDPKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ 185 (295)
Q Consensus 114 ~~~~~e~~~~~p~~-~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (295)
......+.. |..+|.+...+.+ +.++-++.+.||+|=.. .|+ .
T Consensus 161 -----~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TD---------------Mgg-------~-- 211 (249)
T KOG1611|consen 161 -----GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTD---------------MGG-------K-- 211 (249)
T ss_pred -----CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcC---------------CCC-------C--
Confidence 011112222 4488988877654 45677888999986553 111 1
Q ss_pred eeeeeeHHHHHHHHHHHhcC--CCCCCceEEecC
Q 022578 186 VTQLGHVKDLARAFVQVLGN--EKASRQVFNISG 217 (295)
Q Consensus 186 ~~~~i~~~D~a~~i~~~~~~--~~~~~~~~~i~~ 217 (295)
...+.+++-+.-++..+.+ +..+|+.|+..+
T Consensus 212 -~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dl 244 (249)
T KOG1611|consen 212 -KAALTVEESTSKLLASINKLKNEHNGGFFNRDG 244 (249)
T ss_pred -CcccchhhhHHHHHHHHHhcCcccCcceEccCC
Confidence 1336678877777777764 445676676633
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.9e-07 Score=69.06 Aligned_cols=189 Identities=19% Similarity=0.258 Sum_probs=123.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||..-+|...+++|.++|..|.+++-..++..... ++...++.+...|+++..++..++.+ -..|+
T Consensus 15 tggasglg~ataerlakqgasv~lldlp~skg~~va--------kelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 15 TGGASGLGKATAERLAKQGASVALLDLPQSKGADVA--------KELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred ecCcccccHHHHHHHHhcCceEEEEeCCcccchHHH--------HHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 688889999999999999999999998877733221 34457899999999999888888765 27899
Q ss_pred EEEcccC--------------------------ChhcHHHHHHhCC----------CCC--cEEEeeccccccCCCCCCC
Q 022578 76 VYDINGR--------------------------EADEVEPILDALP----------NLE--QFIYCSSAGVYLKSDLLPH 117 (295)
Q Consensus 76 vi~~a~~--------------------------~~~~~~~ll~~~~----------~~~--~~i~~Ss~~v~~~~~~~~~ 117 (295)
.+||+|. |..++.|+++.-. +.+ -+|...|...|.+..+
T Consensus 87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g--- 163 (260)
T KOG1199|consen 87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG--- 163 (260)
T ss_pred eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc---
Confidence 9999987 2234444443311 112 3555555555544322
Q ss_pred CCCCCCCCCccchhhHHHH-------HHhhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHc--CCCcccCCCCCceee
Q 022578 118 CETDTVDPKSRHKGKLNTE-------SVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPIPGSGIQVTQ 188 (295)
Q Consensus 118 ~e~~~~~p~~~~~~k~~~E-------~~~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 188 (295)
...|..+|...- +-+...|++++.+-||.+-.|- +..+-..... .+.+++|. .
T Consensus 164 -------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpl-----lsslpekv~~fla~~ipfps------r 225 (260)
T KOG1199|consen 164 -------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPL-----LSSLPEKVKSFLAQLIPFPS------R 225 (260)
T ss_pred -------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChh-----hhhhhHHHHHHHHHhCCCch------h
Confidence 122335555432 2234568999999998765552 2222222211 12233321 2
Q ss_pred eeeHHHHHHHHHHHhcCCCCCCceEEecCC
Q 022578 189 LGHVKDLARAFVQVLGNEKASRQVFNISGE 218 (295)
Q Consensus 189 ~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~ 218 (295)
.-+..+.+..+..+++++-.+|+++.+.+.
T Consensus 226 lg~p~eyahlvqaiienp~lngevir~dga 255 (260)
T KOG1199|consen 226 LGHPHEYAHLVQAIIENPYLNGEVIRFDGA 255 (260)
T ss_pred cCChHHHHHHHHHHHhCcccCCeEEEecce
Confidence 356888899999999999888999888764
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.1e-07 Score=74.06 Aligned_cols=98 Identities=17% Similarity=0.225 Sum_probs=72.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
||||||+|. +++.|.++|++|++++|++........ .+. ...++.++.+|++|++++.++++. ..+|.
T Consensus 6 tGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~-----~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~ 78 (177)
T PRK08309 6 IGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKR-----EST-TPESITPLPLDYHDDDALKLAIKSTIEKNGPFDL 78 (177)
T ss_pred ECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHH-----Hhh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence 699998876 999999999999999998655221110 001 124688899999999998887764 25788
Q ss_pred EEEcccCChhcHHHHHHhCC--CCC----cEEEeeccc
Q 022578 76 VYDINGREADEVEPILDALP--NLE----QFIYCSSAG 107 (295)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~~--~~~----~~i~~Ss~~ 107 (295)
+|+.+ ...+.+++..+|+ +++ +|+|+=.+.
T Consensus 79 lv~~v--h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~ 114 (177)
T PRK08309 79 AVAWI--HSSAKDALSVVCRELDGSSETYRLFHVLGSA 114 (177)
T ss_pred EEEec--cccchhhHHHHHHHHccCCCCceEEEEeCCc
Confidence 88765 4558899999988 777 899876544
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.3e-07 Score=74.00 Aligned_cols=141 Identities=21% Similarity=0.151 Sum_probs=94.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-CCeEEEEecCCChH----HHHHhhhcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYD----FVKSSLSAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~----~~~~~~~~~~~d~ 75 (295)
||||..||++.+++|+++|.+|.+++|+.++..+..+ ++.... -.++++..|+++++ .+.+.+...++.+
T Consensus 55 TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~k-----EI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 55 TGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAK-----EIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 7999999999999999999999999999999643322 222222 35888999998765 4677777678899
Q ss_pred EEEcccCChh----------------------c----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||++|...+ + ++-++-.+. +..-+|++||.+-. .+..-.+
T Consensus 130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~p~~s 198 (312)
T KOG1014|consen 130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPTPLLS 198 (312)
T ss_pred EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccChhHH
Confidence 9999986221 1 222222222 55678888886531 1111122
Q ss_pred cc-hhhHHHHHHh-------hhcCCcEEEeccCeeecC
Q 022578 128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 128 ~~-~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~ 157 (295)
.| .+|+..+.+- +..|+.+-.+-|..|-++
T Consensus 199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTk 236 (312)
T KOG1014|consen 199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATK 236 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecc
Confidence 33 6777554432 456888888888777665
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=6e-07 Score=67.57 Aligned_cols=190 Identities=16% Similarity=0.211 Sum_probs=119.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
||+.-.||+.++.+|.+.|.+|+++.|.+....+.. .+....++.+.+|+++.+.+.+.+.+. -+|.++|.
T Consensus 13 TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV--------~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN 84 (245)
T KOG1207|consen 13 TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV--------KETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN 84 (245)
T ss_pred ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH--------hhCCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence 677778999999999999999999999988754332 222234899999999999998888753 56888998
Q ss_pred ccCC--------------------hhc--------HHHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-h
Q 022578 80 NGRE--------------------ADE--------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (295)
Q Consensus 80 a~~~--------------------~~~--------~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~ 130 (295)
||.. ..+ .+++++-.. ...+|.+||.+.. .+...++-| .
T Consensus 85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~-~GaIVNvSSqas~-----------R~~~nHtvYca 152 (245)
T KOG1207|consen 85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI-KGAIVNVSSQASI-----------RPLDNHTVYCA 152 (245)
T ss_pred chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC-CceEEEecchhcc-----------cccCCceEEee
Confidence 8862 112 222333222 2249999987642 122233445 7
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|++.+.+-+ ...+++..+.|..++..-...+. -+..++++-. +.-...-|..++.++.++..++
T Consensus 153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnW----SDP~K~k~mL----~riPl~rFaEV~eVVnA~lfLL 224 (245)
T KOG1207|consen 153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNW----SDPDKKKKML----DRIPLKRFAEVDEVVNAVLFLL 224 (245)
T ss_pred cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccccccc----CCchhccchh----hhCchhhhhHHHHHHhhheeee
Confidence 8887776532 24578888999988864221100 0111111111 0111124577999999999988
Q ss_pred cCCC--CCCceEEecCC
Q 022578 204 GNEK--ASRQVFNISGE 218 (295)
Q Consensus 204 ~~~~--~~~~~~~i~~~ 218 (295)
.+.. ..|..+-+.++
T Consensus 225 Sd~ssmttGstlpveGG 241 (245)
T KOG1207|consen 225 SDNSSMTTGSTLPVEGG 241 (245)
T ss_pred ecCcCcccCceeeecCC
Confidence 7643 24555555554
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.6e-06 Score=71.66 Aligned_cols=135 Identities=18% Similarity=0.110 Sum_probs=95.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhc-------CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-------KG 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-------~~ 72 (295)
||...-.|..++++|.++|+.|.+-.-.++...... .+. .++...++-|++++++++++.+. .+
T Consensus 35 TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~--------~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 35 TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLR--------GETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred ecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHh--------hhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 688888999999999999999999885555422211 111 46788899999999998877643 46
Q ss_pred CcEEEEcccC---------------------Chhc----HHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGR---------------------EADE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 73 ~d~vi~~a~~---------------------~~~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
.=.+||+||+ |.-| ++.++-.++ ...|+|++||.+- .-. .+.-.
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R~~--------~p~~g 176 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--RVA--------LPALG 176 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--Ccc--------Ccccc
Confidence 7889999985 2222 444444555 5679999998763 110 01112
Q ss_pred ccchhhHHHHHHh-------hhcCCcEEEeccCe
Q 022578 127 SRHKGKLNTESVL-------ESKGVNWTSLRPVY 153 (295)
Q Consensus 127 ~~~~~k~~~E~~~-------~~~~~~~~i~R~~~ 153 (295)
.|-.+|...|.+. +.+|+++.++-||.
T Consensus 177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~ 210 (322)
T KOG1610|consen 177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGF 210 (322)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence 3458999988764 46899999999994
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.43 E-value=2e-06 Score=90.37 Aligned_cols=147 Identities=14% Similarity=0.019 Sum_probs=99.6
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCcc--ccCCC--------------------------------C---CC--
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPI--AQQLP--------------------------------G---ES-- 40 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~--~~~~~--------------------------------~---~~-- 40 (295)
|||++.||..++++|+++ |.+|+++.|++... +.+.. . ..
T Consensus 2003 TGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei 2082 (2582)
T TIGR02813 2003 TGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEI 2082 (2582)
T ss_pred eCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHH
Confidence 799999999999999998 69999999983110 00000 0 00
Q ss_pred ---chhhhhccCCeEEEEecCCChHHHHHhhhcC----CCcEEEEcccC--------------------ChhcHHHHHHh
Q 022578 41 ---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVVYDINGR--------------------EADEVEPILDA 93 (295)
Q Consensus 41 ---~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~vi~~a~~--------------------~~~~~~~ll~~ 93 (295)
...+.+....+.++.+|++|.+++.+++++. .+|.|||+||. |+.++.+++++
T Consensus 2083 ~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~a 2162 (2582)
T TIGR02813 2083 AQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAA 2162 (2582)
T ss_pred HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0011223456889999999999888887653 58999999996 34567788888
Q ss_pred CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-----hcCCcEEEeccCeeecC
Q 022578 94 LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 94 ~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-----~~~~~~~i~R~~~i~g~ 157 (295)
+. ..++||++||...+-+..+ ...|..+|...+.+.+ ..+.++..+.+|.+-++
T Consensus 2163 l~~~~~~~IV~~SSvag~~G~~g----------qs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2163 LNAENIKLLALFSSAAGFYGNTG----------QSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred HHHhCCCeEEEEechhhcCCCCC----------cHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 76 5678999999765322111 1235477776665542 23578888998876554
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.5e-06 Score=69.77 Aligned_cols=140 Identities=18% Similarity=0.200 Sum_probs=91.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-----CCeEEEEecCCC-hHHHHHhhhc----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-----SKILHLKGDRKD-YDFVKSSLSA---- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~D~~~-~~~~~~~~~~---- 70 (295)
|||++.||..+++.|+++|++|+++.|..... . ........ ..+.+..+|+++ .+++..+++.
T Consensus 11 TGas~GiG~aia~~l~~~G~~v~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 11 TGASSGIGRAIARALAREGARVVVAARRSEEE--A-----AEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred eCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh--h-----HHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 79999999999999999999999888886641 0 00001111 257778899998 7777665543
Q ss_pred -CCCcEEEEcccCCh---------------------hcHHHHHHhCC-CCC--cEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 71 -KGFDVVYDINGREA---------------------DEVEPILDALP-NLE--QFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 71 -~~~d~vi~~a~~~~---------------------~~~~~ll~~~~-~~~--~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
..+|++||+||... .+...+..++. ..+ ++|++||.... ..... .
T Consensus 84 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~---------~ 153 (251)
T COG1028 84 FGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG---------Q 153 (251)
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC---------c
Confidence 25899999998632 11222222211 122 99999998753 21110 1
Q ss_pred CccchhhHHHHHHh-------hhcCCcEEEeccCeeecC
Q 022578 126 KSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 126 ~~~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~ 157 (295)
..|..+|...+.+. ...|+.+..+.||.+-.+
T Consensus 154 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~ 192 (251)
T COG1028 154 AAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP 192 (251)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence 33558999877654 346899999999955443
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.2e-05 Score=65.66 Aligned_cols=200 Identities=7% Similarity=-0.055 Sum_probs=105.4
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCC---------Cccc--cCCCCCCch--------hhhhccCCeEEEEecCC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGK---------APIA--QQLPGESDQ--------EFAEFSSKILHLKGDRK 59 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~--~~~~~~~~~--------~~~~~~~~v~~~~~D~~ 59 (295)
|||+ .-||+++++.|.++|++|.+.++.+ +... ......... .+..-....+-+.+|++
T Consensus 14 TGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~~~i~ 93 (299)
T PRK06300 14 AGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVPEEIR 93 (299)
T ss_pred eCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEeecccC
Confidence 6884 8999999999999999999976542 0000 000000000 00000012223333333
Q ss_pred C--------hHHHHHhhhc-----CCCcEEEEcccCCh----------------------hcH----HHHHHhCCCCCcE
Q 022578 60 D--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEV----EPILDALPNLEQF 100 (295)
Q Consensus 60 ~--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~----~~ll~~~~~~~~~ 100 (295)
+ .++++.+++. -.+|++||++|... .+. +.++..++...++
T Consensus 94 ~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~i 173 (299)
T PRK06300 94 ENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGST 173 (299)
T ss_pred ccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeE
Confidence 3 1224433332 26999999986421 112 2233334433579
Q ss_pred EEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------h-cCCcEEEeccCeeecCCCCC-chHHHHHHHH
Q 022578 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRL 171 (295)
Q Consensus 101 i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~-~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~ 171 (295)
|++||....... +.....|..+|+..+.+.+ . .|+++..+.||.+-.+.... ..........
T Consensus 174 i~iss~~~~~~~---------p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~ 244 (299)
T PRK06300 174 ISLTYLASMRAV---------PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYY 244 (299)
T ss_pred EEEeehhhcCcC---------CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHH
Confidence 999876542111 0000135589998877652 2 38999999999887663211 0001111111
Q ss_pred HcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCC
Q 022578 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
... .+. .....++|+++++..++... ...|+.+.+.++
T Consensus 245 ~~~--~p~-------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 284 (299)
T PRK06300 245 QDW--APL-------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284 (299)
T ss_pred Hhc--CCC-------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 111 111 12356899999999988653 345777877665
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.2e-06 Score=70.99 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=50.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
+|||+|++|+++|+++|++|+++++.....+..... ..++..+.++....+.+.+++...++|+|||+|+.
T Consensus 27 SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~---------~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAv 97 (229)
T PRK09620 27 AKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN---------QLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAG 97 (229)
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC---------ceeEEEEecHHHHHHHHHHHhcccCCCEEEECccc
Confidence 579999999999999999999998654321111110 02344556644444678888865689999999997
Q ss_pred C
Q 022578 83 E 83 (295)
Q Consensus 83 ~ 83 (295)
.
T Consensus 98 s 98 (229)
T PRK09620 98 S 98 (229)
T ss_pred c
Confidence 3
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.1e-06 Score=64.88 Aligned_cols=78 Identities=19% Similarity=0.205 Sum_probs=57.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|.||..+++.|.+.|++|++++|+.+..... ..++.+....+.++.+|+++.+++.+++++ ..+|+
T Consensus 22 TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDi 96 (169)
T PRK06720 22 TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQAT-----VEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDM 96 (169)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 69999999999999999999999999876542110 011112224567889999999888776532 27999
Q ss_pred EEEcccCC
Q 022578 76 VYDINGRE 83 (295)
Q Consensus 76 vi~~a~~~ 83 (295)
+||++|..
T Consensus 97 lVnnAG~~ 104 (169)
T PRK06720 97 LFQNAGLY 104 (169)
T ss_pred EEECCCcC
Confidence 99999853
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.9e-06 Score=73.39 Aligned_cols=90 Identities=23% Similarity=0.254 Sum_probs=70.7
Q ss_pred cCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|+|+||+.++..|++++ .+|++.+|+.++..+... ...++++..++|..|.+++.++++ +.|+|||++.
T Consensus 8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~--------~~~~~v~~~~vD~~d~~al~~li~--~~d~VIn~~p 77 (389)
T COG1748 8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAE--------LIGGKVEALQVDAADVDALVALIK--DFDLVINAAP 77 (389)
T ss_pred CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh--------hccccceeEEecccChHHHHHHHh--cCCEEEEeCC
Confidence 45999999999999998 899999999888443221 112479999999999999999999 8899999998
Q ss_pred CChhcHHHHHHhCC-CCCcEEEee
Q 022578 82 READEVEPILDALP-NLEQFIYCS 104 (295)
Q Consensus 82 ~~~~~~~~ll~~~~-~~~~~i~~S 104 (295)
... ..+++++|- ...++|=+|
T Consensus 78 ~~~--~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 78 PFV--DLTILKACIKTGVDYVDTS 99 (389)
T ss_pred chh--hHHHHHHHHHhCCCEEEcc
Confidence 653 347777766 334666544
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.6e-06 Score=67.91 Aligned_cols=68 Identities=19% Similarity=0.272 Sum_probs=49.2
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhhcCCCcEEEEc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~~ 79 (295)
.+||++|++|+++|+++|++|++++|...... .. ..+++++.++..+ .+.+.+.+. ++|+|||+
T Consensus 23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~----------~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~ 88 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EP----------HPNLSIIEIENVDDLLETLEPLVK--DHDVLIHS 88 (229)
T ss_pred ccchHHHHHHHHHHHhCCCEEEEEECcccccC--CC----------CCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeC
Confidence 47999999999999999999999987643211 00 1356776654322 245566666 89999999
Q ss_pred ccCC
Q 022578 80 NGRE 83 (295)
Q Consensus 80 a~~~ 83 (295)
||..
T Consensus 89 AAvs 92 (229)
T PRK06732 89 MAVS 92 (229)
T ss_pred CccC
Confidence 9974
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.17 E-value=9.4e-07 Score=73.92 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=75.0
Q ss_pred CCcCCcchHHHHHHHHH----CCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
.|||||.|..+++++++ .|...-+..|++++..+.+.+.....-.. .+..-++.+|..|++++.+..+ .+.+|
T Consensus 11 yGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~-ls~~~i~i~D~~n~~Sl~emak--~~~vi 87 (423)
T KOG2733|consen 11 YGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTD-LSSSVILIADSANEASLDEMAK--QARVI 87 (423)
T ss_pred EccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCC-cccceEEEecCCCHHHHHHHHh--hhEEE
Confidence 49999999999999999 57888899999988644332110000011 1233389999999999999999 99999
Q ss_pred EEcccCChhcHHHHHHhCC-CCCcEEEeec
Q 022578 77 YDINGREADEVEPILDALP-NLEQFIYCSS 105 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss 105 (295)
+||+|+-.-..++++.+|- +..+.|-+|.
T Consensus 88 vN~vGPyR~hGE~VVkacienG~~~vDISG 117 (423)
T KOG2733|consen 88 VNCVGPYRFHGEPVVKACIENGTHHVDISG 117 (423)
T ss_pred EeccccceecCcHHHHHHHHcCCceeccCC
Confidence 9999997666777777766 5556665553
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.3e-06 Score=72.09 Aligned_cols=92 Identities=23% Similarity=0.295 Sum_probs=67.1
Q ss_pred CCcCCcchHHHHHHHHHCC-C-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-H-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|+ |++|+.+++.|++.+ + +|++.+|+..+..+...+. ...+++++..|+.|.+++.++++ ++|+|||
T Consensus 4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin 73 (386)
T PF03435_consen 4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------LGDRVEAVQVDVNDPESLAELLR--GCDVVIN 73 (386)
T ss_dssp E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE
T ss_pred EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------cccceeEEEEecCCHHHHHHHHh--cCCEEEE
Confidence 488 999999999999985 4 8999999988843221100 23689999999999999999999 9999999
Q ss_pred cccCChhcHHHHHHhCC-CCCcEEEee
Q 022578 79 INGREADEVEPILDALP-NLEQFIYCS 104 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~-~~~~~i~~S 104 (295)
|++.. ....++++|. ...++|-.|
T Consensus 74 ~~gp~--~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 74 CAGPF--FGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp -SSGG--GHHHHHHHHHHHT-EEEESS
T ss_pred CCccc--hhHHHHHHHHHhCCCeeccc
Confidence 99875 6667777776 444777644
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.9e-05 Score=65.09 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=66.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||||. |+.+++.|.+.|++|++.+++......... .+...+..+..+.+++...+.+.++|+||+++
T Consensus 6 lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-----------~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt 73 (256)
T TIGR00715 6 MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-----------HQALTVHTGALDPQELREFLKRHSIDILVDAT 73 (256)
T ss_pred EechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-----------cCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence 599999 999999999999999999999876322211 22334556667888899999988999999998
Q ss_pred cCC-hhcHHHHHHhCC--CCC
Q 022578 81 GRE-ADEVEPILDALP--NLE 98 (295)
Q Consensus 81 ~~~-~~~~~~ll~~~~--~~~ 98 (295)
-+. ...++|+.++|+ ++.
T Consensus 74 HPfA~~is~~a~~a~~~~~ip 94 (256)
T TIGR00715 74 HPFAAQITTNATAVCKELGIP 94 (256)
T ss_pred CHHHHHHHHHHHHHHHHhCCc
Confidence 664 456888888888 664
|
This enzyme was found to be a monomer by gel filtration. |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=4.5e-05 Score=65.09 Aligned_cols=148 Identities=20% Similarity=0.203 Sum_probs=88.0
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|.||+.++..|..++ .++.++++.... .... .+..... .....+.+|+.++.+.++ ++|+||+
T Consensus 14 iGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~--g~a~-----Dl~~~~~--~~~v~~~td~~~~~~~l~--gaDvVVi 82 (321)
T PTZ00325 14 LGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP--GVAA-----DLSHIDT--PAKVTGYADGELWEKALR--GADLVLI 82 (321)
T ss_pred ECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc--cccc-----chhhcCc--CceEEEecCCCchHHHhC--CCCEEEE
Confidence 5888999999999998654 689999983211 1110 0111111 233445666556667888 9999999
Q ss_pred cccC--------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCC--CCCCCCCCCCCccc-hhhHHHHH--
Q 022578 79 INGR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTES-- 137 (295)
Q Consensus 79 ~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~--~~~e~~~~~p~~~~-~~k~~~E~-- 137 (295)
++|. |...+++++++++ +.+++|+++|-.+-.-..-. .+.+.....|...+ .+-...-+
T Consensus 83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r 162 (321)
T PTZ00325 83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR 162 (321)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence 9987 3345777888877 88999999997663321100 01122222233322 32222212
Q ss_pred -Hh-hhcCCcEEEeccCeeecCCCC
Q 022578 138 -VL-ESKGVNWTSLRPVYIYGPLNY 160 (295)
Q Consensus 138 -~~-~~~~~~~~i~R~~~i~g~~~~ 160 (295)
++ +..++...-++ +.|+|.+..
T Consensus 163 ~~la~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 163 KFVAEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred HHHHHHhCcChhheE-EEEEeecCC
Confidence 12 34577767777 788887664
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.80 E-value=5.3e-05 Score=65.03 Aligned_cols=74 Identities=14% Similarity=0.002 Sum_probs=46.7
Q ss_pred CCcCCcchHHHHHHHHHCC-------CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 73 (295)
|||+|++|++++..|+..+ ++|+++++.+... ..... ...+. ........|+....++.+.++ ++
T Consensus 8 ~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~g~--~~Dl~---d~~~~~~~~~~~~~~~~~~l~--~a 79 (325)
T cd01336 8 TGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALEGV--VMELQ---DCAFPLLKSVVATTDPEEAFK--DV 79 (325)
T ss_pred ECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-cccce--eeehh---hccccccCCceecCCHHHHhC--CC
Confidence 6999999999999999844 5899999976431 01000 00000 000011224433456667888 99
Q ss_pred cEEEEcccC
Q 022578 74 DVVYDINGR 82 (295)
Q Consensus 74 d~vi~~a~~ 82 (295)
|+|||+||.
T Consensus 80 DiVI~tAG~ 88 (325)
T cd01336 80 DVAILVGAM 88 (325)
T ss_pred CEEEEeCCc
Confidence 999999997
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00012 Score=58.15 Aligned_cols=75 Identities=21% Similarity=0.220 Sum_probs=56.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||+|.+|+.+++.|.+.|++|+++.|+.++...... .+.+ ..+.++..+|..+.+++.+.+. ++|+||++.
T Consensus 34 lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~-----~l~~-~~~~~~~~~~~~~~~~~~~~~~--~~diVi~at 105 (194)
T cd01078 34 LGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAAD-----SLRA-RFGEGVGAVETSDDAARAAAIK--GADVVFAAG 105 (194)
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----HHHh-hcCCcEEEeeCCCHHHHHHHHh--cCCEEEECC
Confidence 5899999999999999999999999998655221110 0000 1245566778889998989998 999999987
Q ss_pred cCC
Q 022578 81 GRE 83 (295)
Q Consensus 81 ~~~ 83 (295)
+..
T Consensus 106 ~~g 108 (194)
T cd01078 106 AAG 108 (194)
T ss_pred CCC
Confidence 654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00014 Score=62.18 Aligned_cols=146 Identities=19% Similarity=0.179 Sum_probs=84.4
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
||++|.||+.++..|..++ .++.++++.+.. ...+. +..... .....++++.+++...++ ++|+|||
T Consensus 24 iGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~-g~a~D------l~~~~~--~~~i~~~~~~~d~~~~l~--~aDiVVi 92 (323)
T PLN00106 24 LGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP-GVAAD------VSHINT--PAQVRGFLGDDQLGDALK--GADLVII 92 (323)
T ss_pred ECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC-eeEch------hhhCCc--CceEEEEeCCCCHHHHcC--CCCEEEE
Confidence 5888999999999999765 489999987722 11110 111111 122334444555778888 9999999
Q ss_pred cccC--------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCC--CCCCCCCCCCCCcc-chhhHHHHHHh
Q 022578 79 INGR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL--LPHCETDTVDPKSR-HKGKLNTESVL 139 (295)
Q Consensus 79 ~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~--~~~~e~~~~~p~~~-~~~k~~~E~~~ 139 (295)
+||. |...++++++.+. +...+|+++|--+=+...- ..........|... +.++...+++-
T Consensus 93 tAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~ 172 (323)
T PLN00106 93 PAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRAN 172 (323)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHH
Confidence 9997 3445677777776 7778888887544110000 00011122233333 35555555442
Q ss_pred ----hhcCCcEEEeccCeeecCC
Q 022578 140 ----ESKGVNWTSLRPVYIYGPL 158 (295)
Q Consensus 140 ----~~~~~~~~i~R~~~i~g~~ 158 (295)
+..+++..-+. +.++|.+
T Consensus 173 ~~lA~~lgv~~~~V~-~~ViGeH 194 (323)
T PLN00106 173 TFVAEKKGLDPADVD-VPVVGGH 194 (323)
T ss_pred HHHHHHhCCChhheE-EEEEEeC
Confidence 44577666664 5566654
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0032 Score=50.14 Aligned_cols=190 Identities=13% Similarity=0.120 Sum_probs=107.0
Q ss_pred cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcEEEEcc
Q 022578 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVVYDIN 80 (295)
Q Consensus 6 ~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~vi~~a 80 (295)
-|+..|++.|.++|.++......+.- ..+. .++.+......+++||+++.++++.+|+. -+.|.++|+.
T Consensus 19 SIAwGIAk~l~~~GAeL~fTy~~e~l-~krv-----~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsI 92 (259)
T COG0623 19 SIAWGIAKALAEQGAELAFTYQGERL-EKRV-----EELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSI 92 (259)
T ss_pred cHHHHHHHHHHHcCCEEEEEeccHHH-HHHH-----HHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEe
Confidence 57899999999999999877766522 1111 12222233456799999999999888865 3899999998
Q ss_pred cCChh------------------------cHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 81 GREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 81 ~~~~~------------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
+..+. +...++++++ ....+|-++ |-+. |..-++-.-....|
T Consensus 93 aFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs------~r~vPnYNvMGvAK 162 (259)
T COG0623 93 AFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGS------ERVVPNYNVMGVAK 162 (259)
T ss_pred ccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----eccc------eeecCCCchhHHHH
Confidence 87321 1222333332 333444333 1111 11111111224888
Q ss_pred HHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 133 ~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+..|.-+| ..|+++..+--|.+=.-.... ..+..++.......|+ +..+.++|+++..+.++.
T Consensus 163 AaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl---------~r~vt~eeVG~tA~fLlS 233 (259)
T COG0623 163 AALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL---------RRNVTIEEVGNTAAFLLS 233 (259)
T ss_pred HHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc---------cCCCCHHHhhhhHHHHhc
Confidence 88886542 346676666654321100000 1123333332222222 233669999999888887
Q ss_pred CC--CCCCceEEecCCcc
Q 022578 205 NE--KASRQVFNISGEKY 220 (295)
Q Consensus 205 ~~--~~~~~~~~i~~~~~ 220 (295)
+- ...|++.++.++-.
T Consensus 234 dLssgiTGei~yVD~G~~ 251 (259)
T COG0623 234 DLSSGITGEIIYVDSGYH 251 (259)
T ss_pred chhcccccceEEEcCCce
Confidence 52 34678888877743
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00016 Score=58.78 Aligned_cols=65 Identities=20% Similarity=0.281 Sum_probs=45.7
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcEE
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVV 76 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~v 76 (295)
.++|.||.+++++|+++|++|+++++.... . . . ....+|+.+.+++.+.++. ..+|++
T Consensus 22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-~-~-------------~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL 84 (227)
T TIGR02114 22 HSTGHLGKIITETFLSAGHEVTLVTTKRAL-K-P-------------E--PHPNLSIREIETTKDLLITLKELVQEHDIL 84 (227)
T ss_pred CcccHHHHHHHHHHHHCCCEEEEEcChhhc-c-c-------------c--cCCcceeecHHHHHHHHHHHHHHcCCCCEE
Confidence 368999999999999999999998763211 0 0 0 0124677777666655432 268999
Q ss_pred EEcccCC
Q 022578 77 YDINGRE 83 (295)
Q Consensus 77 i~~a~~~ 83 (295)
||+||..
T Consensus 85 VnnAgv~ 91 (227)
T TIGR02114 85 IHSMAVS 91 (227)
T ss_pred EECCEec
Confidence 9999864
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.47 E-value=7.8e-05 Score=62.21 Aligned_cols=82 Identities=20% Similarity=0.144 Sum_probs=60.0
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
||+||.|..++++|..+|.+-.+..|+..+...... . .+-+.-...+.+++.+++.+. ..++|+||+|
T Consensus 13 GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~--------~--LG~~~~~~p~~~p~~~~~~~~--~~~VVlncvG 80 (382)
T COG3268 13 GATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRA--------S--LGPEAAVFPLGVPAALEAMAS--RTQVVLNCVG 80 (382)
T ss_pred ccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHH--------h--cCccccccCCCCHHHHHHHHh--cceEEEeccc
Confidence 999999999999999999888777888877432211 1 122333334445999999999 9999999999
Q ss_pred CChhcHHHHHHhCC
Q 022578 82 READEVEPILDALP 95 (295)
Q Consensus 82 ~~~~~~~~ll~~~~ 95 (295)
+-......|+++|.
T Consensus 81 Pyt~~g~plv~aC~ 94 (382)
T COG3268 81 PYTRYGEPLVAACA 94 (382)
T ss_pred cccccccHHHHHHH
Confidence 86555555555554
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00045 Score=56.15 Aligned_cols=89 Identities=25% Similarity=0.337 Sum_probs=67.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~ 81 (295)
|.|.+|+.+++.|.+.|++|.++.++++...+.... ......+.+|-++++.++++ +. ++|+++-+.+
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t~ 75 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGID--DADAVVAATG 75 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCC--cCCEEEEeeC
Confidence 689999999999999999999999999885432210 14688999999999999988 66 9999999988
Q ss_pred CChhcHHHHHHhCC--CCCcEEE
Q 022578 82 READEVEPILDALP--NLEQFIY 102 (295)
Q Consensus 82 ~~~~~~~~ll~~~~--~~~~~i~ 102 (295)
.+.....-..-+++ +++++|-
T Consensus 76 ~d~~N~i~~~la~~~~gv~~via 98 (225)
T COG0569 76 NDEVNSVLALLALKEFGVPRVIA 98 (225)
T ss_pred CCHHHHHHHHHHHHhcCCCcEEE
Confidence 75443333233333 7777664
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00054 Score=60.03 Aligned_cols=96 Identities=20% Similarity=0.251 Sum_probs=62.9
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHH-hhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~-~~~~~~~d~vi~ 78 (295)
+||||++|..+++.|+++ +++|..+.+..+. ...+.. ....+..+|..+.+.++. .++ ++|+||.
T Consensus 44 vGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-G~~i~~----------~~~~l~~~~~~~~~~~~~~~~~--~~DvVf~ 110 (381)
T PLN02968 44 LGASGYTGAEVRRLLANHPDFEITVMTADRKA-GQSFGS----------VFPHLITQDLPNLVAVKDADFS--DVDAVFC 110 (381)
T ss_pred ECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-CCCchh----------hCccccCccccceecCCHHHhc--CCCEEEE
Confidence 599999999999999998 6799999886544 222110 111122233332222222 245 8999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeeccccccC
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSAGVYLK 111 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v~~~ 111 (295)
+.+. ....+++..++...++|-+|+..-+.+
T Consensus 111 Alp~--~~s~~i~~~~~~g~~VIDlSs~fRl~~ 141 (381)
T PLN02968 111 CLPH--GTTQEIIKALPKDLKIVDLSADFRLRD 141 (381)
T ss_pred cCCH--HHHHHHHHHHhCCCEEEEcCchhccCC
Confidence 8754 467777777664468999998876644
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0019 Score=52.13 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=54.0
Q ss_pred CCcCCcchHHHHHHHHHCC-----CeEEEEecCCCccccCCCCCCchhhhhccC----CeEEEEecCCChHHHHHhhhc-
Q 022578 1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSS----KILHLKGDRKDYDFVKSSLSA- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~D~~~~~~~~~~~~~- 70 (295)
||++..+|-.|+.+|++.. ..+.+..|+-++..+... .+++..+ .++++.+|+++-.++..+.++
T Consensus 9 TGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~-----~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di 83 (341)
T KOG1478|consen 9 TGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCA-----ALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI 83 (341)
T ss_pred ecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHH-----HHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence 7999999999999999863 356667788777432211 1222333 688999999987666554432
Q ss_pred ----CCCcEEEEcccC
Q 022578 71 ----KGFDVVYDINGR 82 (295)
Q Consensus 71 ----~~~d~vi~~a~~ 82 (295)
...|.|+-.||.
T Consensus 84 ~~rf~~ld~iylNAg~ 99 (341)
T KOG1478|consen 84 KQRFQRLDYIYLNAGI 99 (341)
T ss_pred HHHhhhccEEEEcccc
Confidence 188999988876
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00094 Score=58.88 Aligned_cols=64 Identities=17% Similarity=0.135 Sum_probs=49.1
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc--CCCcEEEEccc
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING 81 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--~~~d~vi~~a~ 81 (295)
+|.+|.+++++|.++|++|+++++..+. . .. .+ +..+|+++.+++.+.+.+ .++|++||+||
T Consensus 213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~--~~-----------~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aa 276 (399)
T PRK05579 213 SGKMGYALARAAARRGADVTLVSGPVNL-P--TP-----------AG--VKRIDVESAQEMLDAVLAALPQADIFIMAAA 276 (399)
T ss_pred cchHHHHHHHHHHHCCCEEEEeCCCccc-c--CC-----------CC--cEEEccCCHHHHHHHHHHhcCCCCEEEEccc
Confidence 8999999999999999999999887532 1 11 12 345688888777777653 26899999999
Q ss_pred CC
Q 022578 82 RE 83 (295)
Q Consensus 82 ~~ 83 (295)
+.
T Consensus 277 v~ 278 (399)
T PRK05579 277 VA 278 (399)
T ss_pred cc
Confidence 73
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00098 Score=57.84 Aligned_cols=82 Identities=10% Similarity=0.015 Sum_probs=55.1
Q ss_pred CCcCCcchHH--HHHHHHHCCCeEEEEecCCCccccC---CCCCCc----hhhhhccCCeEEEEecCCChHHHHHhhhc-
Q 022578 1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQ---LPGESD----QEFAEFSSKILHLKGDRKDYDFVKSSLSA- 70 (295)
Q Consensus 1 tGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~----~~~~~~~~~v~~~~~D~~~~~~~~~~~~~- 70 (295)
||+++-+|.+ +++.| +.|.+|.++++........ ..+... ....+....+..+.+|+++++.+.++++.
T Consensus 47 TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I 125 (398)
T PRK13656 47 IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELI 125 (398)
T ss_pred ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 6999999999 89999 9999999988643221110 000000 11122123467889999999888777654
Q ss_pred ----CCCcEEEEcccCC
Q 022578 71 ----KGFDVVYDINGRE 83 (295)
Q Consensus 71 ----~~~d~vi~~a~~~ 83 (295)
-++|++||++|..
T Consensus 126 ~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 126 KQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHhcCCCCEEEECCccC
Confidence 2799999998863
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.002 Score=55.27 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=42.3
Q ss_pred CCcCCcchHHHHHHHHHCC-------CeEEEEecCC--CccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC
Q 022578 1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-------~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 71 (295)
+||+|.+|+.++..|...| +++.++++.. +..........+.. .....++. +. ....+.++
T Consensus 6 iGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~-~~~~~~~~-i~------~~~~~~~~-- 75 (323)
T cd00704 6 TGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCA-FPLLKGVV-IT------TDPEEAFK-- 75 (323)
T ss_pred ECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhc-ccccCCcE-Ee------cChHHHhC--
Confidence 6899999999999998765 2588888876 32111110000000 00011121 11 22346777
Q ss_pred CCcEEEEcccC
Q 022578 72 GFDVVYDINGR 82 (295)
Q Consensus 72 ~~d~vi~~a~~ 82 (295)
++|+|||+||.
T Consensus 76 ~aDiVVitAG~ 86 (323)
T cd00704 76 DVDVAILVGAF 86 (323)
T ss_pred CCCEEEEeCCC
Confidence 99999999997
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0022 Score=54.85 Aligned_cols=96 Identities=20% Similarity=0.230 Sum_probs=59.4
Q ss_pred CCcCCcchHHHHHHHHH-C--CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVK-E--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
+||+|.+|++++..|.. . ++++.+++|.+.. ..... .+.. .+....+.+ .+.+++.+.++ ++|+||
T Consensus 6 IGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~al-----Dl~~-~~~~~~i~~--~~~~d~~~~l~--~~DiVI 74 (312)
T PRK05086 6 LGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAV-----DLSH-IPTAVKIKG--FSGEDPTPALE--GADVVL 74 (312)
T ss_pred ECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceeh-----hhhc-CCCCceEEE--eCCCCHHHHcC--CCCEEE
Confidence 58999999999998855 2 4688888887432 11000 0110 011122333 22334456677 899999
Q ss_pred EcccC--------------ChhcHHHHHHhCC--CCCcEEEeeccc
Q 022578 78 DINGR--------------EADEVEPILDALP--NLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~ 107 (295)
.++|. |....++++++++ +.+++|.+.|--
T Consensus 75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP 120 (312)
T PRK05086 75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNP 120 (312)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence 99987 2335667777776 677888777743
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.004 Score=53.46 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=25.2
Q ss_pred CCcCCcchHHHHHHHHHCCC-------eEEEEecCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP 31 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~ 31 (295)
+|++|.+|+.++..|...+. +++++++.+..
T Consensus 5 iGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~ 42 (324)
T TIGR01758 5 TGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM 42 (324)
T ss_pred ECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc
Confidence 58889999999999987543 58899886554
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0042 Score=53.17 Aligned_cols=98 Identities=17% Similarity=0.196 Sum_probs=57.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCC-------------CCCCchhhhhccCCeEEEEecCCChHHHHHhhh
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-------------PGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS 69 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 69 (295)
|+|.+|..++..|+++|++|++.+|++....... .............++++ ..++.++++
T Consensus 9 G~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~-------~~~~~~a~~ 81 (308)
T PRK06129 9 GAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV-------TDSLADAVA 81 (308)
T ss_pred CccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE-------ECcHHHhhC
Confidence 4899999999999999999999999976532100 00000000000011111 123456677
Q ss_pred cCCCcEEEEcccCChhcHHHHHHhCC--CCCcEEEeeccccc
Q 022578 70 AKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVY 109 (295)
Q Consensus 70 ~~~~d~vi~~a~~~~~~~~~ll~~~~--~~~~~i~~Ss~~v~ 109 (295)
++|+|+.+..........++..+. .....|..||+..+
T Consensus 82 --~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~ 121 (308)
T PRK06129 82 --DADYVQESAPENLELKRALFAELDALAPPHAILASSTSAL 121 (308)
T ss_pred --CCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence 899999998766555555555443 22344556666643
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0023 Score=54.13 Aligned_cols=74 Identities=12% Similarity=0.138 Sum_probs=52.4
Q ss_pred CCcCCcchHHHHHHHHHCCCe-EEEEecCCC---ccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
+|| |.+|++++..|.+.|.+ |+++.|+.+ +..+. ..++.+....+.+..+|+.+.+.+...++ ..|+|
T Consensus 132 ~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l-----~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~Dil 203 (289)
T PRK12548 132 IGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQT-----AEKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDIL 203 (289)
T ss_pred ECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHH-----HHHHhhcCCCceeEEechhhhhHHHhhhc--cCCEE
Confidence 476 89999999999999986 999999863 31111 11112222345566788888888888888 78999
Q ss_pred EEcccC
Q 022578 77 YDINGR 82 (295)
Q Consensus 77 i~~a~~ 82 (295)
||+...
T Consensus 204 INaTp~ 209 (289)
T PRK12548 204 VNATLV 209 (289)
T ss_pred EEeCCC
Confidence 998654
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0068 Score=52.45 Aligned_cols=88 Identities=17% Similarity=0.126 Sum_probs=55.1
Q ss_pred CCcCCcchHHHHHHHHHCCCe---EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
+||||++|..+++.|.+++|+ +..+.+..+.. ..+. ..+.+....|+.+. .++ ++|+||
T Consensus 7 vGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g-~~l~----------~~g~~i~v~d~~~~-----~~~--~vDvVf 68 (334)
T PRK14874 7 VGATGAVGREMLNILEERNFPVDKLRLLASARSAG-KELS----------FKGKELKVEDLTTF-----DFS--GVDIAL 68 (334)
T ss_pred ECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC-Ceee----------eCCceeEEeeCCHH-----HHc--CCCEEE
Confidence 599999999999999998764 47777765442 1111 12345555566432 235 899999
Q ss_pred EcccCChhcHHHHHHhC-CCCCcEEEeecccc
Q 022578 78 DINGREADEVEPILDAL-PNLEQFIYCSSAGV 108 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v 108 (295)
.+++.. ..+.++..+ +....+|=+|+..-
T Consensus 69 ~A~g~g--~s~~~~~~~~~~G~~VIDlS~~~R 98 (334)
T PRK14874 69 FSAGGS--VSKKYAPKAAAAGAVVIDNSSAFR 98 (334)
T ss_pred ECCChH--HHHHHHHHHHhCCCEEEECCchhh
Confidence 987643 444445443 32236776676543
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0055 Score=48.02 Aligned_cols=64 Identities=16% Similarity=0.218 Sum_probs=40.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhhcCCCcEEEEcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~~a 80 (295)
+||-.|..|++.+..+|++|+.+....+- .. ..+++.+.+.-.+ .+.+.+.+. +.|++|++|
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~-~~-------------p~~~~~i~v~sa~em~~~~~~~~~--~~Di~I~aA 90 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPSSL-PP-------------PPGVKVIRVESAEEMLEAVKELLP--SADIIIMAA 90 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGG--GGSEEEE-S
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCccc-cc-------------cccceEEEecchhhhhhhhccccC--cceeEEEec
Confidence 68999999999999999999999887432 11 1467777754322 244445555 789999999
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
++
T Consensus 91 AV 92 (185)
T PF04127_consen 91 AV 92 (185)
T ss_dssp B-
T ss_pred ch
Confidence 97
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0045 Score=45.50 Aligned_cols=82 Identities=15% Similarity=0.178 Sum_probs=61.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.| .|.+++..|.+.|++|++++.++....... ...++++.+|+.+++. ++-+ +.|.|+-+-.
T Consensus 24 G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-----------~~~~~~v~dDlf~p~~--~~y~--~a~liysirp- 86 (134)
T PRK04148 24 GIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-----------KLGLNAFVDDLFNPNL--EIYK--NAKLIYSIRP- 86 (134)
T ss_pred Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HhCCeEEECcCCCCCH--HHHh--cCCEEEEeCC-
Confidence 466 788899999999999999999988632211 1468899999998864 5666 9999998754
Q ss_pred ChhcHHHHHHhCC--CCCcEE
Q 022578 83 EADEVEPILDALP--NLEQFI 101 (295)
Q Consensus 83 ~~~~~~~ll~~~~--~~~~~i 101 (295)
..+-...+++.++ +..-+|
T Consensus 87 p~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 87 PRDLQPFILELAKKINVPLII 107 (134)
T ss_pred CHHHHHHHHHHHHHcCCCEEE
Confidence 3566777788777 444333
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0055 Score=48.75 Aligned_cols=176 Identities=15% Similarity=0.160 Sum_probs=96.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhh---hc--CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SA--KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~---~~--~~~d 74 (295)
||++-.||..++..+.+.+-+.....+...... +.+. .++........+|++....+.... ++ -+-|
T Consensus 12 TGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~-------v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~ 84 (253)
T KOG1204|consen 12 TGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLK-------VAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD 84 (253)
T ss_pred ecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceE-------EEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence 799999999999999988755443333322211 1110 111122333445555444333332 22 3779
Q ss_pred EEEEcccCC-----------------------hhc----HHHHHHhCC-C--CCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 75 VVYDINGRE-----------------------ADE----VEPILDALP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 75 ~vi~~a~~~-----------------------~~~----~~~ll~~~~-~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
+|||.||.- ..+ ....+...+ . .+.+|++||.+.- .|..
T Consensus 85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav-----------~p~~ 153 (253)
T KOG1204|consen 85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV-----------RPFS 153 (253)
T ss_pred EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh-----------cccc
Confidence 999999861 111 222334444 2 4789999997652 1222
Q ss_pred CCccc-hhhHHHHHHhh-----hc-CCcEEEeccCeeecCCC-----CC---chHHHHHHHHHcCCCcccCCCCCceeee
Q 022578 125 PKSRH-KGKLNTESVLE-----SK-GVNWTSLRPVYIYGPLN-----YN---PVEEWFFHRLKAGRPIPIPGSGIQVTQL 189 (295)
Q Consensus 125 p~~~~-~~k~~~E~~~~-----~~-~~~~~i~R~~~i~g~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
....| .+|++-+.+.+ ++ ++.+..++||.+=.+-+ .. +....+++..++ .-..
T Consensus 154 ~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~------------~~~l 221 (253)
T KOG1204|consen 154 SWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKE------------SGQL 221 (253)
T ss_pred HHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHh------------cCCc
Confidence 22335 88998887763 43 78888999987765421 01 111112222221 1234
Q ss_pred eeHHHHHHHHHHHhcCC
Q 022578 190 GHVKDLARAFVQVLGNE 206 (295)
Q Consensus 190 i~~~D~a~~i~~~~~~~ 206 (295)
++..+.|+.+..++.+.
T Consensus 222 l~~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 222 LDPQVTAKVLAKLLEKG 238 (253)
T ss_pred CChhhHHHHHHHHHHhc
Confidence 56777888888887764
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0018 Score=55.62 Aligned_cols=63 Identities=22% Similarity=0.249 Sum_probs=44.6
Q ss_pred CCcCCcchHHHHHHHHHC-C-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-G-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+|+||+.++++|.++ | .+++++.|+...... + . .++..+++. .+.+.+. ++|+|||
T Consensus 161 tGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~-L--------a-----~el~~~~i~---~l~~~l~--~aDiVv~ 221 (340)
T PRK14982 161 VGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE-L--------Q-----AELGGGKIL---SLEEALP--EADIVVW 221 (340)
T ss_pred EccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH-H--------H-----HHhccccHH---hHHHHHc--cCCEEEE
Confidence 699999999999999865 5 689999887655221 1 1 011123332 4667888 8999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
+++.
T Consensus 222 ~ts~ 225 (340)
T PRK14982 222 VASM 225 (340)
T ss_pred CCcC
Confidence 9876
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.012 Score=50.91 Aligned_cols=86 Identities=15% Similarity=0.141 Sum_probs=53.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEE---EEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVT---LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
+||||++|..+++.|.+++|++. .+.+..+... .+. ..+.+.+..|+. . ..++ ++|+||
T Consensus 5 vGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~-~~~----------~~~~~~~~~~~~-~----~~~~--~~D~v~ 66 (339)
T TIGR01296 5 VGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGR-KVT----------FKGKELEVNEAK-I----ESFE--GIDIAL 66 (339)
T ss_pred EcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCC-eee----------eCCeeEEEEeCC-h----HHhc--CCCEEE
Confidence 49999999999999999888654 3335544321 111 134566666663 2 2345 899999
Q ss_pred EcccCChhcHHHHHHhC-C-CCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDAL-P-NLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~-~-~~~~~i~~Ss~~ 107 (295)
.+++.. ....++..+ + +. ++|=.|+..
T Consensus 67 ~a~g~~--~s~~~a~~~~~~G~-~VID~ss~~ 95 (339)
T TIGR01296 67 FSAGGS--VSKEFAPKAAKCGA-IVIDNTSAF 95 (339)
T ss_pred ECCCHH--HHHHHHHHHHHCCC-EEEECCHHH
Confidence 998754 334444433 3 44 566666543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.02 Score=41.61 Aligned_cols=94 Identities=19% Similarity=0.138 Sum_probs=49.9
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+||||++|+.+++.|.+.. +++..+..+..+....+.. .........+....+ .+.+.+ . ++|+||.|
T Consensus 5 vGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~-~~~~~~----~--~~Dvvf~a 73 (121)
T PF01118_consen 5 VGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSE----VFPHPKGFEDLSVED-ADPEEL----S--DVDVVFLA 73 (121)
T ss_dssp ESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHH----TTGGGTTTEEEBEEE-TSGHHH----T--TESEEEE-
T ss_pred ECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeeh----hccccccccceeEee-cchhHh----h--cCCEEEec
Confidence 5999999999999999973 5655544444321111110 000000112222222 344433 5 99999999
Q ss_pred ccCChhcHHHHHHhCC-CCCcEEEeeccc
Q 022578 80 NGREADEVEPILDALP-NLEQFIYCSSAG 107 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~ 107 (295)
.+. .....+...+. ...++|=.|+..
T Consensus 74 ~~~--~~~~~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 74 LPH--GASKELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp SCH--HHHHHHHHHHHHTTSEEEESSSTT
T ss_pred Cch--hHHHHHHHHHhhCCcEEEeCCHHH
Confidence 753 34445555543 333777666554
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.026 Score=42.32 Aligned_cols=102 Identities=17% Similarity=0.185 Sum_probs=62.9
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccc---cCC-------C----CCCchhhhhccCCeEE--EEecCCChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA---QQL-------P----GESDQEFAEFSSKILH--LKGDRKDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~-------~----~~~~~~~~~~~~~v~~--~~~D~~~~~~~~ 65 (295)
|.|-+|+.+++.|...|. ++++++.+.-... .+. . ......+.+..+++++ +..++.+ +...
T Consensus 6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~-~~~~ 84 (143)
T cd01483 6 GLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE-DNLD 84 (143)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh-hhHH
Confidence 469999999999999997 7888887643311 000 0 0011223334445554 4344433 3335
Q ss_pred HhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccc
Q 022578 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGV 108 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v 108 (295)
..+. ++|+||.+... ......+.+.|+ ....+|..++.+.
T Consensus 85 ~~~~--~~diVi~~~d~-~~~~~~l~~~~~~~~i~~i~~~~~g~ 125 (143)
T cd01483 85 DFLD--GVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLGL 125 (143)
T ss_pred HHhc--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEcCCCc
Confidence 6777 99999999775 445566667777 5567777776553
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.012 Score=50.73 Aligned_cols=90 Identities=14% Similarity=0.118 Sum_probs=52.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEE--EecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTL--FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+||||++|..+++.|.+++|.+.- ..++.++..+.+. ..+. ..++.+.+.. . ++ ++|+||.
T Consensus 10 vGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~----------~~~~---~l~~~~~~~~-~-~~--~vD~vFl 72 (336)
T PRK05671 10 VGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP----------FAGK---NLRVREVDSF-D-FS--QVQLAFF 72 (336)
T ss_pred EccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec----------cCCc---ceEEeeCChH-H-hc--CCCEEEE
Confidence 599999999999999987664433 2233333222221 1222 2233332222 1 46 8999999
Q ss_pred cccCChhcHHHHHHhCC-CCCcEEEeeccccc
Q 022578 79 INGREADEVEPILDALP-NLEQFIYCSSAGVY 109 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~ 109 (295)
+.+. .....++..+. ...++|=.|+..-+
T Consensus 73 a~p~--~~s~~~v~~~~~~G~~VIDlS~~fR~ 102 (336)
T PRK05671 73 AAGA--AVSRSFAEKARAAGCSVIDLSGALPS 102 (336)
T ss_pred cCCH--HHHHHHHHHHHHCCCeEEECchhhcC
Confidence 8863 34455666654 43478877876643
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0044 Score=47.72 Aligned_cols=93 Identities=18% Similarity=0.183 Sum_probs=51.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCC--CchhhhhccCCeEEEEecCCChHHHHHhhhc-------CCC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF 73 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~~~ 73 (295)
|.|-+|+.+++.|+++|++|++.+|++++........ ......+...+.+++..-+.+.++++.++.. ..-
T Consensus 8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g 87 (163)
T PF03446_consen 8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRPG 87 (163)
T ss_dssp --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TT
T ss_pred chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhccccc
Confidence 4789999999999999999999999977642211100 0000011112334555555565555555542 134
Q ss_pred cEEEEcccCChhcHHHHHHhCC
Q 022578 74 DVVYDINGREADEVEPILDALP 95 (295)
Q Consensus 74 d~vi~~a~~~~~~~~~ll~~~~ 95 (295)
.++|++....+...+.+.+.+.
T Consensus 88 ~iiid~sT~~p~~~~~~~~~~~ 109 (163)
T PF03446_consen 88 KIIIDMSTISPETSRELAERLA 109 (163)
T ss_dssp EEEEE-SS--HHHHHHHHHHHH
T ss_pred eEEEecCCcchhhhhhhhhhhh
Confidence 5666666666666666666655
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.0066 Score=43.65 Aligned_cols=87 Identities=17% Similarity=0.127 Sum_probs=60.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-+|..+++.|.+.+++|+++++++....... ..++.++.+|.++++.+.++=- .+.+.|+-+...
T Consensus 5 G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-----------~~~~~~i~gd~~~~~~l~~a~i-~~a~~vv~~~~~ 72 (116)
T PF02254_consen 5 GYGRIGREIAEQLKEGGIDVVVIDRDPERVEELR-----------EEGVEVIYGDATDPEVLERAGI-EKADAVVILTDD 72 (116)
T ss_dssp S-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-----------HTTSEEEES-TTSHHHHHHTTG-GCESEEEEESSS
T ss_pred cCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-----------hcccccccccchhhhHHhhcCc-cccCEEEEccCC
Confidence 5688999999999997779999999987733221 2468999999999999887533 388988888763
Q ss_pred ChhcHHHHHHhCC---CCCcEEE
Q 022578 83 EADEVEPILDALP---NLEQFIY 102 (295)
Q Consensus 83 ~~~~~~~ll~~~~---~~~~~i~ 102 (295)
......++..++ +..+++.
T Consensus 73 -d~~n~~~~~~~r~~~~~~~ii~ 94 (116)
T PF02254_consen 73 -DEENLLIALLARELNPDIRIIA 94 (116)
T ss_dssp -HHHHHHHHHHHHHHTTTSEEEE
T ss_pred -HHHHHHHHHHHHHHCCCCeEEE
Confidence 233333444444 3345553
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.02 Score=50.38 Aligned_cols=65 Identities=20% Similarity=0.268 Sum_probs=47.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHH-HHhhhc--CCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA--KGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~~~--~~~d~vi~~ 79 (295)
+||.+|..++++|..+|++|+++.+..... .+ .++ ...|+++.+++ +.+++. .++|++|++
T Consensus 209 SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~-----------~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~ 272 (390)
T TIGR00521 209 SSGKMGLALAEAAYKRGADVTLITGPVSLL---TP-----------PGV--KSIKVSTAEEMLEAALNELAKDFDIFISA 272 (390)
T ss_pred CcchHHHHHHHHHHHCCCEEEEeCCCCccC---CC-----------CCc--EEEEeccHHHHHHHHHHhhcccCCEEEEc
Confidence 368899999999999999999988766431 11 223 45688888777 544422 268999999
Q ss_pred ccCC
Q 022578 80 NGRE 83 (295)
Q Consensus 80 a~~~ 83 (295)
||..
T Consensus 273 Aavs 276 (390)
T TIGR00521 273 AAVA 276 (390)
T ss_pred cccc
Confidence 9973
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.009 Score=54.04 Aligned_cols=68 Identities=15% Similarity=0.255 Sum_probs=54.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~ 81 (295)
|.|.+|+.+++.|.+.|++|+++++++........ ..+++++.+|.++.+.+.++ ++ ++|.||-+..
T Consensus 7 G~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----------~~~~~~~~gd~~~~~~l~~~~~~--~a~~vi~~~~ 74 (453)
T PRK09496 7 GAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----------RLDVRTVVGNGSSPDVLREAGAE--DADLLIAVTD 74 (453)
T ss_pred CCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----------hcCEEEEEeCCCCHHHHHHcCCC--cCCEEEEecC
Confidence 35999999999999999999999998776332111 13688999999999988888 77 8999998865
Q ss_pred C
Q 022578 82 R 82 (295)
Q Consensus 82 ~ 82 (295)
.
T Consensus 75 ~ 75 (453)
T PRK09496 75 S 75 (453)
T ss_pred C
Confidence 4
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.012 Score=50.50 Aligned_cols=145 Identities=13% Similarity=0.130 Sum_probs=78.1
Q ss_pred CCcCCcchHHHHHHHHHCCC-------eEEEEecCCCc--cccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 71 (295)
+|++|.+|+.++..|+..|. ++.+++..... .........+... ....++++. . .+ .+.++
T Consensus 8 iGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~-~~~~~~~i~-~--~~----~~~~~-- 77 (322)
T cd01338 8 TGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAF-PLLAEIVIT-D--DP----NVAFK-- 77 (322)
T ss_pred ECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccc-cccCceEEe-c--Cc----HHHhC--
Confidence 58889999999999998764 78888885433 1111110000000 001223322 1 12 34566
Q ss_pred CCcEEEEcccCC--------------hhcHHHHHHhCC--C--CCcEEEeeccc---cccCCCCCCCCCCCCCCCCc-cc
Q 022578 72 GFDVVYDINGRE--------------ADEVEPILDALP--N--LEQFIYCSSAG---VYLKSDLLPHCETDTVDPKS-RH 129 (295)
Q Consensus 72 ~~d~vi~~a~~~--------------~~~~~~ll~~~~--~--~~~~i~~Ss~~---v~~~~~~~~~~e~~~~~p~~-~~ 129 (295)
++|+||.+||.. ..-.+.+.+.+. . ...+|.+|-.. +|-- ........+.. ++
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-----~k~sg~~p~~~ViG 152 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA-----MKNAPDIPPDNFTA 152 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH-----HHHcCCCChHheEE
Confidence 999999999872 222344444443 2 33555555311 0000 00110011222 23
Q ss_pred hhhHHHHHHh----hhcCCcEEEeccCeeecCCCC
Q 022578 130 KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY 160 (295)
Q Consensus 130 ~~k~~~E~~~----~~~~~~~~i~R~~~i~g~~~~ 160 (295)
.++...+++. +..+++...+|...|||++..
T Consensus 153 ~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~ 187 (322)
T cd01338 153 MTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP 187 (322)
T ss_pred ehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence 4666666654 457899999998899999754
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.024 Score=47.58 Aligned_cols=94 Identities=16% Similarity=0.169 Sum_probs=65.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|+.| +|+--++....-|++|++++++.++..+..+ ..+.+.+..-..|++.++.+.+ .-|.++|++
T Consensus 188 ~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~----------~LGAd~fv~~~~d~d~~~~~~~--~~dg~~~~v 254 (360)
T KOG0023|consen 188 VGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK----------SLGADVFVDSTEDPDIMKAIMK--TTDGGIDTV 254 (360)
T ss_pred ecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH----------hcCcceeEEecCCHHHHHHHHH--hhcCcceee
Confidence 46777 9988888888889999999999855333222 1356666555558888887777 666666665
Q ss_pred cC-ChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 81 GR-EADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 81 ~~-~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
.. .......+++.++...++|+++-..
T Consensus 255 ~~~a~~~~~~~~~~lk~~Gt~V~vg~p~ 282 (360)
T KOG0023|consen 255 SNLAEHALEPLLGLLKVNGTLVLVGLPE 282 (360)
T ss_pred eeccccchHHHHHHhhcCCEEEEEeCcC
Confidence 42 2345667778888666899888544
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.041 Score=43.91 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=64.6
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCC---------------CCchhhhhccCCeEEEE--ecCCChHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------------ESDQEFAEFSSKILHLK--GDRKDYDFV 64 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~v~~~~--~D~~~~~~~ 64 (295)
|.|-+|+.+++.|...|. ++++++++.-+. +.+.. .....+.+..+.+++.. .++ +.+.+
T Consensus 28 G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~-sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~ 105 (202)
T TIGR02356 28 GAGGLGSPAALYLAGAGVGTIVIVDDDHVDL-SNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV-TAENL 105 (202)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEecCCEEcc-cchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC-CHHHH
Confidence 578999999999999996 899988875331 11110 01112334445555433 333 44567
Q ss_pred HHhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccccc
Q 022578 65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
.+.++ ++|+||.+.. +...-..+-+.|. ....+|+.++.+.+|
T Consensus 106 ~~~~~--~~D~Vi~~~d-~~~~r~~l~~~~~~~~ip~i~~~~~g~~G 149 (202)
T TIGR02356 106 ELLIN--NVDLVLDCTD-NFATRYLINDACVALGTPLISAAVVGFGG 149 (202)
T ss_pred HHHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence 77888 9999999864 3343344555566 556788887766554
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.016 Score=50.39 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=54.6
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEE-ecCCCccccCCCCCCchhhhhccCCeEEE-EecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
+||||++|..+++.|.+. ++++..+ +++.+. ...+. ...+.+... ..++.+. +..++++ ++|+||
T Consensus 6 iGATG~vG~ellr~L~~hP~~el~~l~~s~~sa-gk~~~--------~~~~~l~~~~~~~~~~~-~~~~~~~--~~DvVf 73 (346)
T TIGR01850 6 VGASGYTGGELLRLLLNHPEVEITYLVSSRESA-GKPVS--------EVHPHLRGLVDLNLEPI-DEEEIAE--DADVVF 73 (346)
T ss_pred ECCCCHHHHHHHHHHHcCCCceEEEEeccchhc-CCChH--------HhCccccccCCceeecC-CHHHhhc--CCCEEE
Confidence 599999999999999987 5788854 444322 11110 001111111 1112111 1234445 799999
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEEEeecccccc
Q 022578 78 DINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
.+.+.. ....++..+. ..+++|-+|+..-+.
T Consensus 74 ~alP~~--~s~~~~~~~~~~G~~VIDlS~~fR~~ 105 (346)
T TIGR01850 74 LALPHG--VSAELAPELLAAGVKVIDLSADFRLK 105 (346)
T ss_pred ECCCch--HHHHHHHHHHhCCCEEEeCChhhhcC
Confidence 987543 4555555553 447899888866543
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.05 Score=49.23 Aligned_cols=70 Identities=29% Similarity=0.380 Sum_probs=53.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.+++.|.+.|++|++++++++..... .....++.++.+|.++++.+.++-- .++|.||-+...
T Consensus 238 G~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~---------~~~~~~~~~i~gd~~~~~~L~~~~~-~~a~~vi~~~~~ 307 (453)
T PRK09496 238 GGGNIGYYLAKLLEKEGYSVKLIERDPERAEEL---------AEELPNTLVLHGDGTDQELLEEEGI-DEADAFIALTND 307 (453)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH---------HHHCCCCeEEECCCCCHHHHHhcCC-ccCCEEEECCCC
Confidence 469999999999999999999999988763211 1112468899999999988865442 389999877653
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.035 Score=54.71 Aligned_cols=69 Identities=14% Similarity=-0.007 Sum_probs=52.4
Q ss_pred cCCcchHHHHHHHHHC-CCe-------------EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhh
Q 022578 3 GTRFIGVFLSRLLVKE-GHQ-------------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL 68 (295)
Q Consensus 3 atG~iG~~l~~~L~~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~ 68 (295)
|+|++|+.+++.|.+. +++ |++.+++.....+ +.+..++++.+..|+.|.+++.+++
T Consensus 576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~---------la~~~~~~~~v~lDv~D~e~L~~~v 646 (1042)
T PLN02819 576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKE---------TVEGIENAEAVQLDVSDSESLLKYV 646 (1042)
T ss_pred CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHH---------HHHhcCCCceEEeecCCHHHHHHhh
Confidence 4699999999999875 333 7777776655221 1222347888999999999999999
Q ss_pred hcCCCcEEEEcccC
Q 022578 69 SAKGFDVVYDINGR 82 (295)
Q Consensus 69 ~~~~~d~vi~~a~~ 82 (295)
+ ++|+||++...
T Consensus 647 ~--~~DaVIsalP~ 658 (1042)
T PLN02819 647 S--QVDVVISLLPA 658 (1042)
T ss_pred c--CCCEEEECCCc
Confidence 9 89999999765
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.015 Score=43.19 Aligned_cols=67 Identities=15% Similarity=0.080 Sum_probs=44.6
Q ss_pred cCCcchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|+|..|+.++..|.+.|.+ |+++.|+.++..+ +.+...+..+-..++. ++...+. ++|+||++.+
T Consensus 19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~---------l~~~~~~~~~~~~~~~---~~~~~~~--~~DivI~aT~ 84 (135)
T PF01488_consen 19 GAGGAARAVAAALAALGAKEITIVNRTPERAEA---------LAEEFGGVNIEAIPLE---DLEEALQ--EADIVINATP 84 (135)
T ss_dssp SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHH---------HHHHHTGCSEEEEEGG---GHCHHHH--TESEEEE-SS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHH---------HHHHcCccccceeeHH---HHHHHHh--hCCeEEEecC
Confidence 4588999999999999976 9999999877322 2222222223333333 3446777 8999999976
Q ss_pred CC
Q 022578 82 RE 83 (295)
Q Consensus 82 ~~ 83 (295)
..
T Consensus 85 ~~ 86 (135)
T PF01488_consen 85 SG 86 (135)
T ss_dssp TT
T ss_pred CC
Confidence 53
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.029 Score=48.71 Aligned_cols=94 Identities=19% Similarity=0.153 Sum_probs=55.4
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEE-EecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+||||++|+.+++.|.+. ++++.++.++.+. .+.+. ...+++..+ ..++.+.+.. .+. ++|+||.
T Consensus 8 iGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~--------~~~~~~~~~~~~~~~~~~~~--~~~--~vD~Vf~ 74 (343)
T PRK00436 8 VGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLS--------DVHPHLRGLVDLVLEPLDPE--ILA--GADVVFL 74 (343)
T ss_pred ECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchH--------HhCcccccccCceeecCCHH--Hhc--CCCEEEE
Confidence 599999999999999987 6788887774332 11111 001112111 1123333322 345 8999999
Q ss_pred cccCChhcHHHHHHhC-CCCCcEEEeeccccc
Q 022578 79 INGREADEVEPILDAL-PNLEQFIYCSSAGVY 109 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v~ 109 (295)
+... .....++..+ +..+++|=.|+..-+
T Consensus 75 alP~--~~~~~~v~~a~~aG~~VID~S~~fR~ 104 (343)
T PRK00436 75 ALPH--GVSMDLAPQLLEAGVKVIDLSADFRL 104 (343)
T ss_pred CCCc--HHHHHHHHHHHhCCCEEEECCcccCC
Confidence 8754 3444555544 455688888876654
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.05 Score=42.31 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=62.7
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCc---cccCCCC----------CCchhhhhccCCeEE--EEecCCChHHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLPG----------ESDQEFAEFSSKILH--LKGDRKDYDFVKS 66 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~~----------~~~~~~~~~~~~v~~--~~~D~~~~~~~~~ 66 (295)
|.|-+|+.++..|...|. ++++++.+.-. ...+... .....+.+..+.+++ +...+ +.+.+.+
T Consensus 6 G~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~~~~~~~ 84 (174)
T cd01487 6 GAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-DENNLEG 84 (174)
T ss_pred CcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-ChhhHHH
Confidence 578999999999999997 59998888622 1111100 011122333344444 44444 3456777
Q ss_pred hhhcCCCcEEEEcccCChhcHHHHHHhCC-C-CCcEEEeecccccc
Q 022578 67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL 110 (295)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~-~~~~i~~Ss~~v~~ 110 (295)
.++ ++|+||.+.. +...-..+.+.+. . ...+|+-+..+-|+
T Consensus 85 ~l~--~~DlVi~~~d-~~~~r~~i~~~~~~~~~ip~i~~~~~~~~~ 127 (174)
T cd01487 85 LFG--DCDIVVEAFD-NAETKAMLAESLLGNKNKPVVCASGMAGFG 127 (174)
T ss_pred Hhc--CCCEEEECCC-CHHHHHHHHHHHHHHCCCCEEEEehhhccC
Confidence 888 9999999943 4444344556655 3 56777765554444
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.082 Score=45.24 Aligned_cols=83 Identities=14% Similarity=0.211 Sum_probs=56.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.+|.++.. .++..+ ...+++.++++ ++|+|+.+...
T Consensus 143 G~G~IG~~vA~~l~afG~~V~~~~~~~~~~----------------~~~~~~----~~~~~l~e~l~--~aDvvv~~lPl 200 (312)
T PRK15469 143 GAGVLGSKVAQSLQTWGFPLRCWSRSRKSW----------------PGVQSF----AGREELSAFLS--QTRVLINLLPN 200 (312)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCCCC----------------CCceee----cccccHHHHHh--cCCEEEECCCC
Confidence 689999999999999999999998865441 122211 13456888999 99999988765
Q ss_pred ChhcHHHHH-----HhCCCCCcEEEeecccc
Q 022578 83 EADEVEPIL-----DALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~~ll-----~~~~~~~~~i~~Ss~~v 108 (295)
+. .++.++ +.++...-||.++=..+
T Consensus 201 t~-~T~~li~~~~l~~mk~ga~lIN~aRG~v 230 (312)
T PRK15469 201 TP-ETVGIINQQLLEQLPDGAYLLNLARGVH 230 (312)
T ss_pred CH-HHHHHhHHHHHhcCCCCcEEEECCCccc
Confidence 43 344444 44554457777664433
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.025 Score=52.68 Aligned_cols=80 Identities=11% Similarity=0.128 Sum_probs=58.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-+|+.+++.|.++|++|++++.+++...... ..+...+.+|.+|++.++++=- .++|.++-+.+.
T Consensus 424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~-----------~~g~~~i~GD~~~~~~L~~a~i-~~a~~viv~~~~ 491 (558)
T PRK10669 424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELR-----------ERGIRAVLGNAANEEIMQLAHL-DCARWLLLTIPN 491 (558)
T ss_pred CCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----------HCCCeEEEcCCCCHHHHHhcCc-cccCEEEEEcCC
Confidence 6799999999999999999999999887643221 2578999999999988876442 388888776554
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
+. ...+++.+++
T Consensus 492 ~~-~~~~iv~~~~ 503 (558)
T PRK10669 492 GY-EAGEIVASAR 503 (558)
T ss_pred hH-HHHHHHHHHH
Confidence 32 3334444443
|
|
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.04 Score=46.04 Aligned_cols=63 Identities=17% Similarity=0.077 Sum_probs=52.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+|-+|..++=.+.+.|.+|++++|......-+.. -+.+..|+.|.++++.++++++||.||-
T Consensus 19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------------hrs~Vi~MlD~~al~avv~rekPd~IVp 81 (394)
T COG0027 19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSYVIDMLDGDALRAVVEREKPDYIVP 81 (394)
T ss_pred cCCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------------hheeeeeccCHHHHHHHHHhhCCCeeee
Confidence 68999999999999999999999999887432221 2235579999999999999999999994
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.059 Score=39.13 Aligned_cols=96 Identities=17% Similarity=0.153 Sum_probs=53.1
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeE-EEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|.+|..+++.|.+. ++++.++..++.+..+.. ....+++. .+..++ +.+.+. .. ++|+||-
T Consensus 5 iG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~--~~--~~DvV~~ 71 (122)
T smart00859 5 VGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRV--------SEAGPHLKGEVVLEL-EPEDFE--EL--AVDIVFL 71 (122)
T ss_pred ECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCH--------HHHCccccccccccc-ccCChh--hc--CCCEEEE
Confidence 488999999999999995 888888833332211111 11112221 111222 222232 23 8999999
Q ss_pred cccCChhc--HHHHHHhCCCCCcEEEeeccccc
Q 022578 79 INGREADE--VEPILDALPNLEQFIYCSSAGVY 109 (295)
Q Consensus 79 ~a~~~~~~--~~~ll~~~~~~~~~i~~Ss~~v~ 109 (295)
+.+..... ...+..+++..+.+|.+||..-+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~g~~viD~s~~~~~ 104 (122)
T smart00859 72 ALPHGVSKEIAPLLPKAAEAGVKVIDLSSAFRM 104 (122)
T ss_pred cCCcHHHHHHHHHHHhhhcCCCEEEECCccccC
Confidence 87754221 11233344555688888876543
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.21 Score=39.79 Aligned_cols=98 Identities=14% Similarity=0.157 Sum_probs=58.3
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecC---CCccccCCCC--CC--------chhhhhccCC--eEEEEecCCChHHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRG---KAPIAQQLPG--ES--------DQEFAEFSSK--ILHLKGDRKDYDFVKS 66 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~--~~--------~~~~~~~~~~--v~~~~~D~~~~~~~~~ 66 (295)
|.|.+|+.++..|...|. +|++++++ .+....+... .. ...+....+. ++.+..++ +.+.+.+
T Consensus 28 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i-~~~~~~~ 106 (200)
T TIGR02354 28 GLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKI-TEENIDK 106 (200)
T ss_pred CcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeC-CHhHHHH
Confidence 468899999999999998 79999988 4443332110 00 1112233343 44444555 4466777
Q ss_pred hhhcCCCcEEEEcccCChhcHHHHHHhCC---CCCcEEEee
Q 022578 67 SLSAKGFDVVYDINGREADEVEPILDALP---NLEQFIYCS 104 (295)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~---~~~~~i~~S 104 (295)
.++ ++|+||.+. .+...-..+.+.+. +...++..|
T Consensus 107 ~~~--~~DlVi~a~-Dn~~~k~~l~~~~~~~~~~~~ii~~~ 144 (200)
T TIGR02354 107 FFK--DADIVCEAF-DNAEAKAMLVNAVLEKYKDKYLIAAS 144 (200)
T ss_pred Hhc--CCCEEEECC-CCHHHHHHHHHHHHHHcCCCcEEEEe
Confidence 888 999999993 44443334445544 343444433
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.16 Score=44.04 Aligned_cols=105 Identities=21% Similarity=0.304 Sum_probs=66.5
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCC-----------CCC--CchhhhhccCC--eEEEEecCCChHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQL-----------PGE--SDQEFAEFSSK--ILHLKGDRKDYDF 63 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~-----------~~~--~~~~~~~~~~~--v~~~~~D~~~~~~ 63 (295)
|.|.+|+.++..|...|. +|++++++.-+. ..+. .+. ....+.+..+. ++.+..+++ .+.
T Consensus 31 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~~~-~~~ 109 (339)
T PRK07688 31 GAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQDVT-AEE 109 (339)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence 569999999999999997 899999875331 1110 000 01122333344 444555654 456
Q ss_pred HHHhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeeccccccC
Q 022578 64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK 111 (295)
Q Consensus 64 ~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~ 111 (295)
+.++++ ++|+||.+.. |...-..+-++|. ....+|+.++.+.||.
T Consensus 110 ~~~~~~--~~DlVid~~D-n~~~r~~ln~~~~~~~iP~i~~~~~g~~G~ 155 (339)
T PRK07688 110 LEELVT--GVDLIIDATD-NFETRFIVNDAAQKYGIPWIYGACVGSYGL 155 (339)
T ss_pred HHHHHc--CCCEEEEcCC-CHHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence 677888 8999999965 3444444555565 4568888887776663
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.06 Score=45.11 Aligned_cols=93 Identities=23% Similarity=0.246 Sum_probs=56.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCC---CCchhhhhccCCeEEEEecCCChHHHHHhhhc--------C
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG---ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------K 71 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--------~ 71 (295)
|.|..|..++..|+++||+|++.+|++++..+.... .....-.+.....+++..-+.|.++++.++.. .
T Consensus 7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~~~~~~ 86 (286)
T COG2084 7 GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGLLEGLK 86 (286)
T ss_pred cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccchhhcCC
Confidence 579999999999999999999999998883221110 00000011123445555556666666666541 0
Q ss_pred CCcEEEEcccCChhcHHHHHHhCC
Q 022578 72 GFDVVYDINGREADEVEPILDALP 95 (295)
Q Consensus 72 ~~d~vi~~a~~~~~~~~~ll~~~~ 95 (295)
.=.++|++..+.++.++.+.+.++
T Consensus 87 ~G~i~IDmSTisp~~a~~~a~~~~ 110 (286)
T COG2084 87 PGAIVIDMSTISPETARELAAALA 110 (286)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHH
Confidence 124555666666666666666665
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.21 Score=43.35 Aligned_cols=102 Identities=17% Similarity=0.282 Sum_probs=64.9
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCC---------------C--CchhhhhccCCe--EEEEecCCChH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------------E--SDQEFAEFSSKI--LHLKGDRKDYD 62 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---------------~--~~~~~~~~~~~v--~~~~~D~~~~~ 62 (295)
|.|-+|+.+++.|...|. ++++++++.-+. +.+.. . ....+.+..+.+ +.+..|++ .+
T Consensus 31 G~GglGs~va~~La~aGvg~i~lvD~D~ve~-sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~~-~~ 108 (338)
T PRK12475 31 GAGALGAANAEALVRAGIGKLTIADRDYVEW-SNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDVT-VE 108 (338)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCcccc-cccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccCC-HH
Confidence 468899999999999997 888888886331 11110 0 012233333444 44555664 45
Q ss_pred HHHHhhhcCCCcEEEEcccCChhcHHHHH-HhCC-CCCcEEEeecccccc
Q 022578 63 FVKSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 63 ~~~~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~i~~Ss~~v~~ 110 (295)
.+.++++ ++|+||.+.. +. .++.++ +.|. ....+|+.+..+.+|
T Consensus 109 ~~~~~~~--~~DlVid~~D-~~-~~r~~in~~~~~~~ip~i~~~~~g~~G 154 (338)
T PRK12475 109 ELEELVK--EVDLIIDATD-NF-DTRLLINDLSQKYNIPWIYGGCVGSYG 154 (338)
T ss_pred HHHHHhc--CCCEEEEcCC-CH-HHHHHHHHHHHHcCCCEEEEEecccEE
Confidence 6778888 9999999974 33 344444 4454 455788887766655
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.23 Score=39.47 Aligned_cols=105 Identities=16% Similarity=0.207 Sum_probs=64.9
Q ss_pred CCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccC--CCC-----------CCchhhhhccCCeEEEE--ecCCC-hHH
Q 022578 4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQ--LPG-----------ESDQEFAEFSSKILHLK--GDRKD-YDF 63 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~--~~~-----------~~~~~~~~~~~~v~~~~--~D~~~-~~~ 63 (295)
.|-+|..+++.|...|. ++++++.+.-.. ..+ +.. .....+++..+.+++.. .++.+ .+.
T Consensus 27 ~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~~~~~~~~ 106 (198)
T cd01485 27 AGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEEDSLSNDSN 106 (198)
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecccccchhh
Confidence 45599999999999996 688888774331 111 000 00112344456555544 34432 445
Q ss_pred HHHhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeeccccccC
Q 022578 64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK 111 (295)
Q Consensus 64 ~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~ 111 (295)
..+.+. ++|+||.+.. +......+-+.|. ....+|+.++.+.||.
T Consensus 107 ~~~~~~--~~dvVi~~~d-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~ 152 (198)
T cd01485 107 IEEYLQ--KFTLVIATEE-NYERTAKVNDVCRKHHIPFISCATYGLIGY 152 (198)
T ss_pred HHHHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence 667777 8999998854 3444455666676 5568888888776653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.039 Score=49.30 Aligned_cols=30 Identities=30% Similarity=0.501 Sum_probs=27.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|++|..++..|.+.|++|+++++++.+.
T Consensus 7 GlG~~G~~lA~~La~~G~~V~~~d~~~~~v 36 (411)
T TIGR03026 7 GLGYVGLPLAALLADLGHEVTGVDIDQEKV 36 (411)
T ss_pred CCCchhHHHHHHHHhcCCeEEEEECCHHHH
Confidence 589999999999999999999999988764
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.094 Score=42.21 Aligned_cols=104 Identities=13% Similarity=0.161 Sum_probs=63.0
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCc---cccCCC--CC--------CchhhhhccCCeEE--EEecCCChHHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLP--GE--------SDQEFAEFSSKILH--LKGDRKDYDFVKS 66 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~--~~--------~~~~~~~~~~~v~~--~~~D~~~~~~~~~ 66 (295)
|.|-+|+.++..|...|. ++++++.+.-+ ...+.. .. ....+.+..+.+++ +...++ .+.+.+
T Consensus 35 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~-~~~~~~ 113 (212)
T PRK08644 35 GAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKID-EDNIEE 113 (212)
T ss_pred CcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecC-HHHHHH
Confidence 578999999999999997 58888887422 111110 00 01112333344444 444443 355667
Q ss_pred hhhcCCCcEEEEcccCChhcHHHHHHhCC-C-CCcEEEeecccccc
Q 022578 67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL 110 (295)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~-~~~~i~~Ss~~v~~ 110 (295)
.++ ++|+||.+.. +...-..+.+.|. . ...+|+.+...-|+
T Consensus 114 ~~~--~~DvVI~a~D-~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~ 156 (212)
T PRK08644 114 LFK--DCDIVVEAFD-NAETKAMLVETVLEHPGKKLVAASGMAGYG 156 (212)
T ss_pred HHc--CCCEEEECCC-CHHHHHHHHHHHHHhCCCCEEEeehhhccC
Confidence 888 9999999953 4444445566665 4 66888876555444
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.01 Score=46.38 Aligned_cols=85 Identities=16% Similarity=0.119 Sum_probs=57.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-||+.+++.|..-|.+|++.+|........ ...++ ...+++++++ .+|+|+.+...
T Consensus 43 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-----------~~~~~--------~~~~l~ell~--~aDiv~~~~pl 101 (178)
T PF02826_consen 43 GYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-----------DEFGV--------EYVSLDELLA--QADIVSLHLPL 101 (178)
T ss_dssp STSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-----------HHTTE--------EESSHHHHHH--H-SEEEE-SSS
T ss_pred EEcCCcCeEeeeeecCCceeEEecccCChhhhc-----------ccccc--------eeeehhhhcc--hhhhhhhhhcc
Confidence 579999999999999999999999998862200 00112 1235667888 89999988765
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....||.++-..+
T Consensus 102 t~~T~~li~~~~l~~mk~ga~lvN~aRG~~ 131 (178)
T PF02826_consen 102 TPETRGLINAEFLAKMKPGAVLVNVARGEL 131 (178)
T ss_dssp STTTTTSBSHHHHHTSTTTEEEEESSSGGG
T ss_pred ccccceeeeeeeeeccccceEEEeccchhh
Confidence 432 24556777775558888776554
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.036 Score=52.00 Aligned_cols=80 Identities=13% Similarity=0.213 Sum_probs=60.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-+|+.+++.|.++|+++++++.+++...... ..+..++.||.++++.++++=- .+.|.+|-+...
T Consensus 407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~-----------~~g~~v~~GDat~~~~L~~agi-~~A~~vv~~~~d 474 (601)
T PRK03659 407 GFGRFGQVIGRLLMANKMRITVLERDISAVNLMR-----------KYGYKVYYGDATQLELLRAAGA-EKAEAIVITCNE 474 (601)
T ss_pred cCchHHHHHHHHHHhCCCCEEEEECCHHHHHHHH-----------hCCCeEEEeeCCCHHHHHhcCC-ccCCEEEEEeCC
Confidence 5799999999999999999999999987743221 1478899999999998876532 388988877654
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
.+....++..++
T Consensus 475 -~~~n~~i~~~~r 486 (601)
T PRK03659 475 -PEDTMKIVELCQ 486 (601)
T ss_pred -HHHHHHHHHHHH
Confidence 344555555555
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.032 Score=47.11 Aligned_cols=84 Identities=18% Similarity=0.230 Sum_probs=55.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.+++.|...|.+|++..|++...... . ..+...+ ..+.+.+.+. +.|+||++...
T Consensus 158 G~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~---------~--~~g~~~~-----~~~~l~~~l~--~aDiVint~P~ 219 (287)
T TIGR02853 158 GFGRTGMTIARTFSALGARVFVGARSSADLARI---------T--EMGLIPF-----PLNKLEEKVA--EIDIVINTIPA 219 (287)
T ss_pred cChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------H--HCCCeee-----cHHHHHHHhc--cCCEEEECCCh
Confidence 468899999999999999999999987652110 0 0122222 2345677887 99999998754
Q ss_pred ChhcHHHHHHhCCCCCcEEEeec
Q 022578 83 EADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
... ....++.++...-+|-++|
T Consensus 220 ~ii-~~~~l~~~k~~aliIDlas 241 (287)
T TIGR02853 220 LVL-TADVLSKLPKHAVIIDLAS 241 (287)
T ss_pred HHh-CHHHHhcCCCCeEEEEeCc
Confidence 322 2445666664446666665
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.15 Score=43.88 Aligned_cols=94 Identities=12% Similarity=0.203 Sum_probs=59.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeE-EEEecC-CChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDR-KDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~-~~~~~~~~~~~~~~~d~vi~ 78 (295)
+||+|.+|..+++.+...|.+|+++++++++.... .+ .+++ ++..+- .+...........++|+||+
T Consensus 145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~---------~~--lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d 213 (325)
T TIGR02825 145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL---------KK--LGFDVAFNYKTVKSLEETLKKASPDGYDCYFD 213 (325)
T ss_pred eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--cCCCEEEeccccccHHHHHHHhCCCCeEEEEE
Confidence 48899999999988888899999988876652111 11 1232 222211 12222222222237999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
+.|. ......++.++...++|.++...
T Consensus 214 ~~G~--~~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 214 NVGG--EFSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred CCCH--HHHHHHHHHhCcCcEEEEecchh
Confidence 9874 34577788888666888776543
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.073 Score=46.42 Aligned_cols=96 Identities=13% Similarity=0.182 Sum_probs=50.6
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhc--cCC-eEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF--SSK-ILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~-v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
+||||++|+.+++.|.+.. .++.++.++.++......... ....+ ..+ ..-+...-.+++. +. ++|+|
T Consensus 9 ~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~----~~--~~DvV 80 (349)
T PRK08664 9 LGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAV--RWQLDGPIPEEVADMEVVSTDPEA----VD--DVDIV 80 (349)
T ss_pred ECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccc--cccccccccccccceEEEeCCHHH----hc--CCCEE
Confidence 5999999999999999875 488888566544332221100 00000 000 0001111123433 34 89999
Q ss_pred EEcccCChhcHHHHHHhCC-CCCcEEEeecc
Q 022578 77 YDINGREADEVEPILDALP-NLEQFIYCSSA 106 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~ 106 (295)
|.+.+.+ ....+++.+. ...++|-.|+.
T Consensus 81 f~a~p~~--~s~~~~~~~~~~G~~vIDls~~ 109 (349)
T PRK08664 81 FSALPSD--VAGEVEEEFAKAGKPVFSNASA 109 (349)
T ss_pred EEeCChh--HHHHHHHHHHHCCCEEEECCch
Confidence 9876554 3345555554 32355555543
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.076 Score=44.16 Aligned_cols=80 Identities=20% Similarity=0.162 Sum_probs=44.4
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEe-cCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|.+|+.+++.+.+. +.++.++. ++++..... -..++...++++++++ ++|+||+
T Consensus 7 iG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~------------------~~~~i~~~~dl~~ll~--~~DvVid 66 (257)
T PRK00048 7 AGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ------------------GALGVAITDDLEAVLA--DADVLID 66 (257)
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc------------------CCCCccccCCHHHhcc--CCCEEEE
Confidence 478899999999988875 67877754 444331110 0112222334555666 6888888
Q ss_pred cccCChhcHHHHHHhCCCCCcEE
Q 022578 79 INGREADEVEPILDALPNLEQFI 101 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i 101 (295)
++.++.. ...+..+++..+++|
T Consensus 67 ~t~p~~~-~~~~~~al~~G~~vv 88 (257)
T PRK00048 67 FTTPEAT-LENLEFALEHGKPLV 88 (257)
T ss_pred CCCHHHH-HHHHHHHHHcCCCEE
Confidence 7743321 233333333334555
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.11 Score=42.34 Aligned_cols=103 Identities=15% Similarity=0.162 Sum_probs=63.4
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCC---------------CCchhhhhccCCe--EEEEecCCChHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------------ESDQEFAEFSSKI--LHLKGDRKDYDFV 64 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~v--~~~~~D~~~~~~~ 64 (295)
|.|-+|+.+++.|...|. ++++++.+.-.. +.+.. .....+.+..+.+ +.+..++ +.+.+
T Consensus 28 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~-sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-~~~~~ 105 (228)
T cd00757 28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVVEL-SNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-DAENA 105 (228)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcC-cccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-CHHHH
Confidence 578999999999999996 777776654331 11110 0111223334444 4444444 35667
Q ss_pred HHhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccccc
Q 022578 65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
.+.++ ++|+||.+.. +...-..+-+.|. ....+|+.+..+.+|
T Consensus 106 ~~~~~--~~DvVi~~~d-~~~~r~~l~~~~~~~~ip~i~~g~~g~~g 149 (228)
T cd00757 106 EELIA--GYDLVLDCTD-NFATRYLINDACVKLGKPLVSGAVLGFEG 149 (228)
T ss_pred HHHHh--CCCEEEEcCC-CHHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence 77888 8999999976 3444444555565 556888877655444
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.12 Score=44.18 Aligned_cols=29 Identities=31% Similarity=0.484 Sum_probs=25.6
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGK 29 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~ 29 (295)
+|++|.+|..++..|+..|+ +|++++|..
T Consensus 6 iGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 6 IGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred ECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 58899999999999999986 599999954
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.35 Score=39.76 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=64.6
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCC---------------CCchhhhhccCCeEEEEecC-CChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------------ESDQEFAEFSSKILHLKGDR-KDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~v~~~~~D~-~~~~~~~ 65 (295)
|.|.+|+.++..|...|. ++++++.+.-.. +.+.. .....+.+..+.+++...+- .+.+.+.
T Consensus 31 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~-sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~~~~~~ 109 (240)
T TIGR02355 31 GLGGLGCAASQYLAAAGVGNLTLLDFDTVSL-SNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLDDAELA 109 (240)
T ss_pred CcCHHHHHHHHHHHHcCCCEEEEEeCCcccc-cCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCCHHHHH
Confidence 578999999999999985 788888776542 11110 00122344445555544432 2445677
Q ss_pred HhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccccc
Q 022578 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
++++ ++|+||.+... ......+-++|. ....+|+.++.+.+|
T Consensus 110 ~~~~--~~DlVvd~~D~-~~~r~~ln~~~~~~~ip~v~~~~~g~~G 152 (240)
T TIGR02355 110 ALIA--EHDIVVDCTDN-VEVRNQLNRQCFAAKVPLVSGAAIRMEG 152 (240)
T ss_pred HHhh--cCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEecccEe
Confidence 7888 99999999753 333333445555 556888876655444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.019 Score=49.23 Aligned_cols=86 Identities=8% Similarity=0.050 Sum_probs=49.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-CCe--EEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKI--LHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v--~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|+|.+|..++..|+..|++|++.+++++........ ....+.... .+. .-....++-..+++++++ ++|.|+-+
T Consensus 14 GaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~--~aDlViEa 90 (321)
T PRK07066 14 GSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRAN-VANAWPALERQGLAPGASPARLRFVATIEACVA--DADFIQES 90 (321)
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH-HHHHHHHHHHcCCChhhHHhhceecCCHHHHhc--CCCEEEEC
Confidence 579999999999999999999999988653211000 000000000 000 000011111224567777 99999999
Q ss_pred ccCChhcHHHHH
Q 022578 80 NGREADEVEPIL 91 (295)
Q Consensus 80 a~~~~~~~~~ll 91 (295)
+..+.+--+.+.
T Consensus 91 vpE~l~vK~~lf 102 (321)
T PRK07066 91 APEREALKLELH 102 (321)
T ss_pred CcCCHHHHHHHH
Confidence 877665444443
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.36 Score=35.67 Aligned_cols=104 Identities=15% Similarity=0.185 Sum_probs=65.6
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCC--------------CCchhhhhccCCe--EEEEecCCChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKI--LHLKGDRKDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--------------~~~~~~~~~~~~v--~~~~~D~~~~~~~~ 65 (295)
|.|-+|+.++..|...|. ++++++.+.-+....-.+ .....+.+..+.+ +.+..++ +.+.+.
T Consensus 9 G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~ 87 (135)
T PF00899_consen 9 GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-DEENIE 87 (135)
T ss_dssp STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-SHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-cccccc
Confidence 679999999999999997 788888775442111100 0111223444444 4444555 556778
Q ss_pred HhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccccc
Q 022578 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
+.++ ++|+||.+... ......+.+.|. ....+|+.++.+.+|
T Consensus 88 ~~~~--~~d~vi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~G 130 (135)
T PF00899_consen 88 ELLK--DYDIVIDCVDS-LAARLLLNEICREYGIPFIDAGVNGFYG 130 (135)
T ss_dssp HHHH--TSSEEEEESSS-HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred cccc--CCCEEEEecCC-HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence 8888 99999998654 444445566666 555888887765543
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.2 Score=43.49 Aligned_cols=89 Identities=12% Similarity=0.060 Sum_probs=51.3
Q ss_pred CCcCCcchHHHHHHHHHCCCe---EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.||||++|..+++.|.+++|. +..+....+. .+.+. ..+.+....++ ++ ..+. ++|+||
T Consensus 13 vGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa-Gk~~~----------~~~~~~~v~~~-~~----~~~~--~~D~vf 74 (344)
T PLN02383 13 VGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA-GKKVT----------FEGRDYTVEEL-TE----DSFD--GVDIAL 74 (344)
T ss_pred EcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC-CCeee----------ecCceeEEEeC-CH----HHHc--CCCEEE
Confidence 499999999999999997774 3333322221 11111 01233333333 22 2345 899999
Q ss_pred EcccCChhcHHHHHHhC-CCCCcEEEeeccccc
Q 022578 78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVY 109 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v~ 109 (295)
.+++.. ....++..+ +...++|=.|+..-+
T Consensus 75 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR~ 105 (344)
T PLN02383 75 FSAGGS--ISKKFGPIAVDKGAVVVDNSSAFRM 105 (344)
T ss_pred ECCCcH--HHHHHHHHHHhCCCEEEECCchhhc
Confidence 887643 444444444 344578878876543
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.13 Score=43.82 Aligned_cols=81 Identities=19% Similarity=0.106 Sum_probs=55.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.+|.... .++... ..+++++++ ++|+|+.+...
T Consensus 129 G~G~IG~~vA~~l~afG~~V~~~~r~~~~-----------------~~~~~~------~~~l~ell~--~aDiv~~~lp~ 183 (303)
T PRK06436 129 GYGGIGRRVALLAKAFGMNIYAYTRSYVN-----------------DGISSI------YMEPEDIMK--KSDFVLISLPL 183 (303)
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCCcc-----------------cCcccc------cCCHHHHHh--hCCEEEECCCC
Confidence 57999999999887779999999987433 112110 124677888 89999988765
Q ss_pred Chhc----HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EADE----VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~----~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+. ....++.++....||.+|...+
T Consensus 184 t~~T~~li~~~~l~~mk~ga~lIN~sRG~~ 213 (303)
T PRK06436 184 TDETRGMINSKMLSLFRKGLAIINVARADV 213 (303)
T ss_pred CchhhcCcCHHHHhcCCCCeEEEECCCccc
Confidence 4321 2445666775568888887655
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.091 Score=45.08 Aligned_cols=87 Identities=18% Similarity=0.175 Sum_probs=61.3
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccCC
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~ 83 (295)
.|-+|+..++.+...|.+|++++|++++..... . -+.+.+... +|++....+-+ .+|+||.+++
T Consensus 175 ~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~----------~-lGAd~~i~~-~~~~~~~~~~~--~~d~ii~tv~-- 238 (339)
T COG1064 175 AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAK----------K-LGADHVINS-SDSDALEAVKE--IADAIIDTVG-- 238 (339)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH----------H-hCCcEEEEc-CCchhhHHhHh--hCcEEEECCC--
Confidence 457898888888889999999999998842111 1 233333322 26666666665 5999999998
Q ss_pred hhcHHHHHHhCCCCCcEEEeecc
Q 022578 84 ADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 84 ~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
.......+++++...+++.++-.
T Consensus 239 ~~~~~~~l~~l~~~G~~v~vG~~ 261 (339)
T COG1064 239 PATLEPSLKALRRGGTLVLVGLP 261 (339)
T ss_pred hhhHHHHHHHHhcCCEEEEECCC
Confidence 56677788888855688877643
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.095 Score=46.24 Aligned_cols=65 Identities=15% Similarity=0.036 Sum_probs=51.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|+|..|..+++.+.+.|++|++++.++......+ --..+..|..|++.+.++.++.++|.|+...
T Consensus 6 G~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~~~~id~v~~~~ 70 (380)
T TIGR01142 6 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------------AHRSYVINMLDGDALRAVIEREKPDYIVPEI 70 (380)
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh-------------CceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence 3689999999999999999999999876532221 1234567888999999999888899998653
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.072 Score=38.88 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=48.8
Q ss_pred CCcCCcchHHHHHHHHH-CCCeEEEE-ecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVK-EGHQVTLF-TRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.|++|.+|+.+++.+.+ .++++.+. +|+++... .++ ...+... ..++. -.++++++++ .+|+||
T Consensus 6 ~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~---g~d-~g~~~~~~~~~~~-------v~~~l~~~~~--~~DVvI 72 (124)
T PF01113_consen 6 VGASGRMGRAIAEAILESPGFELVGAVDRKPSAKV---GKD-VGELAGIGPLGVP-------VTDDLEELLE--EADVVI 72 (124)
T ss_dssp ETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTT---TSB-CHHHCTSST-SSB-------EBS-HHHHTT--H-SEEE
T ss_pred ECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccc---cch-hhhhhCcCCcccc-------cchhHHHhcc--cCCEEE
Confidence 48889999999999999 57886664 45542211 000 0000000 01111 1256778888 699999
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEE
Q 022578 78 DINGREADEVEPILDALP-NLEQFI 101 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i 101 (295)
++. +++.+...++.+. ...++|
T Consensus 73 DfT--~p~~~~~~~~~~~~~g~~~V 95 (124)
T PF01113_consen 73 DFT--NPDAVYDNLEYALKHGVPLV 95 (124)
T ss_dssp EES---HHHHHHHHHHHHHHT-EEE
T ss_pred EcC--ChHHhHHHHHHHHhCCCCEE
Confidence 997 5677777777766 333444
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.29 Score=40.37 Aligned_cols=81 Identities=17% Similarity=0.103 Sum_probs=62.4
Q ss_pred chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC-Chh
Q 022578 7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR-EAD 85 (295)
Q Consensus 7 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~-~~~ 85 (295)
=|+.+++.|.+.|++|++-.-....... ..++.+..+-+.+.+.+.+.+++.+++.||+..=+ ...
T Consensus 13 egr~la~~L~~~g~~v~~Svat~~g~~~-------------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~ 79 (248)
T PRK08057 13 EARALARALAAAGVDIVLSLAGRTGGPA-------------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQ 79 (248)
T ss_pred HHHHHHHHHHhCCCeEEEEEccCCCCcc-------------cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHH
Confidence 3789999999999998886655544211 14678888988899999999999999999998633 455
Q ss_pred cHHHHHHhCC--CCCcE
Q 022578 86 EVEPILDALP--NLEQF 100 (295)
Q Consensus 86 ~~~~ll~~~~--~~~~~ 100 (295)
-++++.++|+ ++..+
T Consensus 80 is~~a~~ac~~~~ipyi 96 (248)
T PRK08057 80 ISANAAAACRALGIPYL 96 (248)
T ss_pred HHHHHHHHHHHhCCcEE
Confidence 6888888888 66433
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.11 Score=45.69 Aligned_cols=90 Identities=8% Similarity=0.028 Sum_probs=61.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-+|...++.|...|.+|++++|++...... ...... .+..+..+.+.+.+.+. +.|+||++++.
T Consensus 174 GaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l---------~~~~g~--~v~~~~~~~~~l~~~l~--~aDvVI~a~~~ 240 (370)
T TIGR00518 174 GGGVVGTNAAKMANGLGATVTILDINIDRLRQL---------DAEFGG--RIHTRYSNAYEIEDAVK--RADLLIGAVLI 240 (370)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH---------HHhcCc--eeEeccCCHHHHHHHHc--cCCEEEEcccc
Confidence 468999999999999999999999987652110 000111 23345567788888888 99999999743
Q ss_pred C----h-hcHHHHHHhCCCCCcEEEeec
Q 022578 83 E----A-DEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 83 ~----~-~~~~~ll~~~~~~~~~i~~Ss 105 (295)
. + --+...++.++....+|-++.
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~ 268 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAI 268 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence 1 1 124666777774457777774
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.031 Score=41.86 Aligned_cols=72 Identities=21% Similarity=0.248 Sum_probs=44.0
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|.+|++++..|...+ .++.++++.......... +..-............. .+. +.++ ++|+||-
T Consensus 6 iGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~---Dl~~~~~~~~~~~~i~~-~~~----~~~~--~aDivvi 75 (141)
T PF00056_consen 6 IGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEAL---DLSHASAPLPSPVRITS-GDY----EALK--DADIVVI 75 (141)
T ss_dssp ESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHH---HHHHHHHGSTEEEEEEE-SSG----GGGT--TESEEEE
T ss_pred ECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeeh---hhhhhhhhccccccccc-ccc----cccc--cccEEEE
Confidence 5889999999999999986 589999998655321110 00001111112222111 233 3555 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 76 tag~ 79 (141)
T PF00056_consen 76 TAGV 79 (141)
T ss_dssp TTST
T ss_pred eccc
Confidence 9987
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.065 Score=45.55 Aligned_cols=84 Identities=19% Similarity=0.243 Sum_probs=55.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|..+++.|...|.+|++.+|++..... . . ..+.+++ ..+.+.+.+. +.|+||+++..
T Consensus 159 G~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-~--------~--~~G~~~~-----~~~~l~~~l~--~aDiVI~t~p~ 220 (296)
T PRK08306 159 GFGRTGMTLARTLKALGANVTVGARKSAHLAR-I--------T--EMGLSPF-----HLSELAEEVG--KIDIIFNTIPA 220 (296)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H--------H--HcCCeee-----cHHHHHHHhC--CCCEEEECCCh
Confidence 35889999999999999999999999765211 0 0 1233332 2345677787 89999998753
Q ss_pred ChhcHHHHHHhCCCCCcEEEeec
Q 022578 83 EADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
..-.+..++.++....+|-+++
T Consensus 221 -~~i~~~~l~~~~~g~vIIDla~ 242 (296)
T PRK08306 221 -LVLTKEVLSKMPPEALIIDLAS 242 (296)
T ss_pred -hhhhHHHHHcCCCCcEEEEEcc
Confidence 2234555666664445665664
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.19 Score=43.17 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=59.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+||+|-+|..+++.+...|.+|+++++++++.... .+ -+++.+ .|..+. +.+..... .++|+||
T Consensus 150 ~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l---------~~--~Ga~~v-i~~~~~~~~~~v~~~~~-~gvd~vl 216 (329)
T cd08294 150 NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL---------KE--LGFDAV-FNYKTVSLEEALKEAAP-DGIDCYF 216 (329)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--cCCCEE-EeCCCccHHHHHHHHCC-CCcEEEE
Confidence 48899999999999988999999998877652211 11 122222 122222 23333322 4799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
++.|. ......++.++...+++.+++..
T Consensus 217 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~ 244 (329)
T cd08294 217 DNVGG--EFSSTVLSHMNDFGRVAVCGSIS 244 (329)
T ss_pred ECCCH--HHHHHHHHhhccCCEEEEEcchh
Confidence 99874 45566777777556888876543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.053 Score=46.16 Aligned_cols=30 Identities=23% Similarity=0.431 Sum_probs=27.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|.+.|++|++.+|++++.
T Consensus 7 GlG~mG~~la~~L~~~g~~V~~~dr~~~~~ 36 (298)
T TIGR00872 7 GLGRMGANIVRRLAKRGHDCVGYDHDQDAV 36 (298)
T ss_pred cchHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 479999999999999999999999988763
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.034 Score=47.15 Aligned_cols=29 Identities=31% Similarity=0.335 Sum_probs=26.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..+++.|++.|++|++.+|++++
T Consensus 6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~ 34 (291)
T TIGR01505 6 GLGIMGSPMSINLAKAGYQLHVTTIGPEV 34 (291)
T ss_pred EecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence 57999999999999999999999998766
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.12 Score=45.57 Aligned_cols=61 Identities=18% Similarity=0.148 Sum_probs=48.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+|.+|+.++..+.+.|++|++++.++....... --..+.+|+.|.+.+.++.+ .+|+|..
T Consensus 9 G~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-------------ad~~~~~~~~D~~~l~~~a~--~~dvit~ 69 (372)
T PRK06019 9 GGGQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-------------ADEVIVADYDDVAALRELAE--QCDVITY 69 (372)
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-------------CceEEecCCCCHHHHHHHHh--cCCEEEe
Confidence 4589999999999999999999998776632221 12456678999999999998 8998763
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.13 Score=43.55 Aligned_cols=30 Identities=17% Similarity=0.314 Sum_probs=27.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|.+|..++..|+..|++|++.+++++..
T Consensus 12 GaG~mG~~iA~~~a~~G~~V~l~d~~~~~~ 41 (286)
T PRK07819 12 GAGQMGAGIAEVCARAGVDVLVFETTEELA 41 (286)
T ss_pred cccHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 469999999999999999999999998874
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.11 Score=44.57 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=50.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+|++|+-++..-.+.|++|++++-.++....... -+.+..+.+|++.++++.+ .+|+|=.
T Consensus 8 GGGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------------~~~i~~~~dD~~al~ela~--~~DViT~ 68 (375)
T COG0026 8 GGGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------------DRVIVAAYDDPEALRELAA--KCDVITY 68 (375)
T ss_pred cCcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------------cceeecCCCCHHHHHHHHh--hCCEEEE
Confidence 57999999999999999999999988877544332 3466777789999999999 9999873
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.13 Score=45.76 Aligned_cols=83 Identities=11% Similarity=0.007 Sum_probs=54.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.++++.+..... ..+++++ + +.++++ +.|+||.+.|.
T Consensus 219 G~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-----------~~G~~v~-----~---l~eal~--~aDVVI~aTG~ 277 (425)
T PRK05476 219 GYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-----------MDGFRVM-----T---MEEAAE--LGDIFVTATGN 277 (425)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-----------hcCCEec-----C---HHHHHh--CCCEEEECCCC
Confidence 4699999999999999999999998876632111 1233322 1 345666 89999998764
Q ss_pred ChhcHHHHHHhCCCCCcEEEeecc
Q 022578 83 EADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
...-....++.++....++.++..
T Consensus 278 ~~vI~~~~~~~mK~GailiNvG~~ 301 (425)
T PRK05476 278 KDVITAEHMEAMKDGAILANIGHF 301 (425)
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCC
Confidence 322223455666655567766643
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.28 Score=42.47 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=58.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC----hHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~~~~~~~~~~~d~v 76 (295)
+||+|.+|..+++.+...|.+|+++++++++.... .+. .+++.+ .|..+ .+.+.+... .++|+|
T Consensus 158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~---------~~~-lGa~~v-i~~~~~~~~~~~i~~~~~-~gvd~v 225 (338)
T cd08295 158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL---------KNK-LGFDDA-FNYKEEPDLDAALKRYFP-NGIDIY 225 (338)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HHh-cCCcee-EEcCCcccHHHHHHHhCC-CCcEEE
Confidence 48899999999998888999999988887662211 110 122222 12211 122333322 479999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|++.|. ......++.++...+++.++.
T Consensus 226 ~d~~g~--~~~~~~~~~l~~~G~iv~~G~ 252 (338)
T cd08295 226 FDNVGG--KMLDAVLLNMNLHGRIAACGM 252 (338)
T ss_pred EECCCH--HHHHHHHHHhccCcEEEEecc
Confidence 999874 456677788875568887764
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.05 Score=49.21 Aligned_cols=68 Identities=24% Similarity=0.288 Sum_probs=46.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|+++ +|..+++.|++.|++|++.++......... ...+. ..+++++.+|..+ ..+. ++|+||+++
T Consensus 11 iG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~----~~~l~--~~~~~~~~~~~~~-----~~~~--~~d~vv~~~ 76 (450)
T PRK14106 11 VGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEA----LEELG--ELGIELVLGEYPE-----EFLE--GVDLVVVSP 76 (450)
T ss_pred ECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHH--hcCCEEEeCCcch-----hHhh--cCCEEEECC
Confidence 47666 999999999999999999998753311000 00111 1257788887765 2345 899999998
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
+.
T Consensus 77 g~ 78 (450)
T PRK14106 77 GV 78 (450)
T ss_pred CC
Confidence 86
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.095 Score=38.31 Aligned_cols=88 Identities=20% Similarity=0.278 Sum_probs=57.8
Q ss_pred chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC---hHHHHHhhhcCCCcEEEEcccCC
Q 022578 7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDINGRE 83 (295)
Q Consensus 7 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi~~a~~~ 83 (295)
||...++.+...|.+|+++++++.+... ..+ -+.+.+ .|..+ .+.+.+.....++|+||+|+|.
T Consensus 2 vG~~a~q~ak~~G~~vi~~~~~~~k~~~---------~~~--~Ga~~~-~~~~~~~~~~~i~~~~~~~~~d~vid~~g~- 68 (130)
T PF00107_consen 2 VGLMAIQLAKAMGAKVIATDRSEEKLEL---------AKE--LGADHV-IDYSDDDFVEQIRELTGGRGVDVVIDCVGS- 68 (130)
T ss_dssp HHHHHHHHHHHTTSEEEEEESSHHHHHH---------HHH--TTESEE-EETTTSSHHHHHHHHTTTSSEEEEEESSSS-
T ss_pred hHHHHHHHHHHcCCEEEEEECCHHHHHH---------HHh--hccccc-ccccccccccccccccccccceEEEEecCc-
Confidence 6888888888889999999998877321 111 233333 23333 3455555553479999999984
Q ss_pred hhcHHHHHHhCCCCCcEEEeeccc
Q 022578 84 ADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 84 ~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
.......++.++...+++.++...
T Consensus 69 ~~~~~~~~~~l~~~G~~v~vg~~~ 92 (130)
T PF00107_consen 69 GDTLQEAIKLLRPGGRIVVVGVYG 92 (130)
T ss_dssp HHHHHHHHHHEEEEEEEEEESSTS
T ss_pred HHHHHHHHHHhccCCEEEEEEccC
Confidence 456667777777555777766543
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.063 Score=45.70 Aligned_cols=94 Identities=12% Similarity=0.146 Sum_probs=49.4
Q ss_pred CCcCCcchHHHHHHHHHCCC--e-EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--Q-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.||||.+|+.+++.|.++.. . +.++....+. ... .+++....+.-++.+.+.....++|++|
T Consensus 7 vGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSa-G~~--------------~~~f~~~~~~v~~~~~~~~~~~~~Divf 71 (334)
T COG0136 7 LGATGAVGQVLLELLEERHFPFEELVLLASARSA-GKK--------------YIEFGGKSIGVPEDAADEFVFSDVDIVF 71 (334)
T ss_pred EeccchHHHHHHHHHHhcCCCcceEEEEeccccc-CCc--------------cccccCccccCccccccccccccCCEEE
Confidence 49999999999999999743 2 3333322222 111 1222221122222222222223899999
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEEEeeccccccCCC
Q 022578 78 DINGREADEVEPILDALP-NLEQFIYCSSAGVYLKSD 113 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~ 113 (295)
.++|-... +.+...+. .. ++.++.++.|-...
T Consensus 72 ~~ag~~~s--~~~~p~~~~~G--~~VIdnsSa~Rm~~ 104 (334)
T COG0136 72 FAAGGSVS--KEVEPKAAEAG--CVVIDNSSAFRMDP 104 (334)
T ss_pred EeCchHHH--HHHHHHHHHcC--CEEEeCCcccccCC
Confidence 99975433 55555544 22 44555555554433
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.26 Score=42.31 Aligned_cols=93 Identities=19% Similarity=0.217 Sum_probs=60.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHH---HhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK---SSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~---~~~~~~~~d~vi 77 (295)
+|++|-+|..+++.+...|.+|++++++...... + ... +... ..|..+.+... ......++|.++
T Consensus 173 ~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~--------~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i 240 (342)
T cd08266 173 HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLER-A--------KEL--GADY-VIDYRKEDFVREVRELTGKRGVDVVV 240 (342)
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HHc--CCCe-EEecCChHHHHHHHHHhCCCCCcEEE
Confidence 4888999999999999999999998887655211 0 111 1111 12444433333 333334799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
++++. ......++.++...+++.+++..
T Consensus 241 ~~~g~--~~~~~~~~~l~~~G~~v~~~~~~ 268 (342)
T cd08266 241 EHVGA--ATWEKSLKSLARGGRLVTCGATT 268 (342)
T ss_pred ECCcH--HHHHHHHHHhhcCCEEEEEecCC
Confidence 99875 34566667777446899888654
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.022 Score=48.23 Aligned_cols=89 Identities=10% Similarity=0.124 Sum_probs=49.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEE--------ecCCChHHHHHhhhcCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK--------GDRKDYDFVKSSLSAKGFD 74 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~D~~~~~~~~~~~~~~~~d 74 (295)
|+|.+|..++..|++.|++|++.+++++........ ....+..+..+..... ..+.-..++.++++ ++|
T Consensus 10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~--~aD 86 (287)
T PRK08293 10 GAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER-IAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAVK--DAD 86 (287)
T ss_pred CCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH-HHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHhc--CCC
Confidence 479999999999999999999999987653211100 0000000000000000 00111123556677 999
Q ss_pred EEEEcccCChhcHHHHHHhC
Q 022578 75 VVYDINGREADEVEPILDAL 94 (295)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~ 94 (295)
.||.+...+.+.-+.+++.+
T Consensus 87 lVieavpe~~~~k~~~~~~l 106 (287)
T PRK08293 87 LVIEAVPEDPEIKGDFYEEL 106 (287)
T ss_pred EEEEeccCCHHHHHHHHHHH
Confidence 99999876655545544443
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.044 Score=43.41 Aligned_cols=65 Identities=22% Similarity=0.080 Sum_probs=42.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||+|.||..++++|.+.||+|+.-+|+.++..+... ....+. + ..-+...+.+ ..|+||-..
T Consensus 6 i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a-------~~l~~~--i------~~~~~~dA~~--~aDVVvLAV 68 (211)
T COG2085 6 IIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAA-------AALGPL--I------TGGSNEDAAA--LADVVVLAV 68 (211)
T ss_pred EeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHH-------Hhhccc--c------ccCChHHHHh--cCCEEEEec
Confidence 4899999999999999999999998666655222111 011112 1 1223345666 899999876
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
..
T Consensus 69 P~ 70 (211)
T COG2085 69 PF 70 (211)
T ss_pred cH
Confidence 54
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.22 Score=42.73 Aligned_cols=89 Identities=22% Similarity=0.282 Sum_probs=56.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-hHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~ 79 (295)
+||+|.+|..+++.+...|.+|+++++++..... + .+. ....++ +..+ .+.+.+. . ++|+|+++
T Consensus 169 ~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~-~--------~~~-~~~~~~--~~~~~~~~~~~~-~--~~d~v~~~ 233 (332)
T cd08259 169 TGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI-L--------KEL-GADYVI--DGSKFSEDVKKL-G--GADVVIEL 233 (332)
T ss_pred ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH-H--------HHc-CCcEEE--ecHHHHHHHHhc-c--CCCEEEEC
Confidence 4899999999999999999999999887655211 1 111 111222 2111 1222221 2 79999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
++.. .....++.+....++|.++..
T Consensus 234 ~g~~--~~~~~~~~~~~~g~~v~~g~~ 258 (332)
T cd08259 234 VGSP--TIEESLRSLNKGGRLVLIGNV 258 (332)
T ss_pred CChH--HHHHHHHHhhcCCEEEEEcCC
Confidence 8753 355666666655678877754
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.31 Score=42.04 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=59.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC---hHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi 77 (295)
+||+|-+|+..++-+...|..+++.+.++.+.. .+. + .+.+.+. |..+ .+.++++....++|+|+
T Consensus 149 ~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~--------~--lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~ 216 (326)
T COG0604 149 HGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK--------E--LGADHVI-NYREEDFVEQVRELTGGKGVDVVL 216 (326)
T ss_pred ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH--------h--cCCCEEE-cCCcccHHHHHHHHcCCCCceEEE
Confidence 589999999999999999977777776665533 111 1 2222222 1222 34455555545799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
++.|.. .....+.+++...+++.+...+
T Consensus 217 D~vG~~--~~~~~l~~l~~~G~lv~ig~~~ 244 (326)
T COG0604 217 DTVGGD--TFAASLAALAPGGRLVSIGALS 244 (326)
T ss_pred ECCCHH--HHHHHHHHhccCCEEEEEecCC
Confidence 998743 4455677777337888777654
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.14 Score=45.10 Aligned_cols=29 Identities=24% Similarity=0.558 Sum_probs=26.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK 29 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~ 29 (295)
+||.|.+|+.++..|.+.|++|++.+|++
T Consensus 104 iGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 104 VGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred EcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 47899999999999999999999999864
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.17 Score=44.93 Aligned_cols=81 Identities=10% Similarity=0.024 Sum_probs=55.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||..+++.+...|.+|+++++++.+..... ..+++.+. +.+++. +.|+||.+.|.
T Consensus 209 G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-----------~~G~~~~~--------~~e~v~--~aDVVI~atG~ 267 (413)
T cd00401 209 GYGDVGKGCAQSLRGQGARVIVTEVDPICALQAA-----------MEGYEVMT--------MEEAVK--EGDIFVTTTGN 267 (413)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-----------hcCCEEcc--------HHHHHc--CCCEEEECCCC
Confidence 6799999999999999999999888876632111 13443331 124556 89999999875
Q ss_pred ChhcHHHHHHhCCCCCcEEEee
Q 022578 83 EADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~S 104 (295)
...-....++.++....+++++
T Consensus 268 ~~~i~~~~l~~mk~GgilvnvG 289 (413)
T cd00401 268 KDIITGEHFEQMKDGAIVCNIG 289 (413)
T ss_pred HHHHHHHHHhcCCCCcEEEEeC
Confidence 4323334577777666888877
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.14 Score=46.59 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=56.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCC------------CCCchhhhhccCCeEEEEecCCChHHHHHhh--
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP------------GESDQEFAEFSSKILHLKGDRKDYDFVKSSL-- 68 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------------~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~-- 68 (295)
|.|.+|+.+++.|+++|++|.+.+|++++...... .....++.+...+.++|..-+.+.+.++.++
T Consensus 13 GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV~~Vi~g 92 (493)
T PLN02350 13 GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPVDQTIKA 92 (493)
T ss_pred eeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHHHHHHHH
Confidence 57899999999999999999999999876432111 0111112222122444444455554444443
Q ss_pred --hc-CCCcEEEEcccCChhcHHHHHHhCC
Q 022578 69 --SA-KGFDVVYDINGREADEVEPILDALP 95 (295)
Q Consensus 69 --~~-~~~d~vi~~a~~~~~~~~~ll~~~~ 95 (295)
.. ..=|+||++....+..++.+.+.++
T Consensus 93 l~~~l~~G~iiID~sT~~~~~t~~~~~~l~ 122 (493)
T PLN02350 93 LSEYMEPGDCIIDGGNEWYENTERRIKEAA 122 (493)
T ss_pred HHhhcCCCCEEEECCCCCHHHHHHHHHHHH
Confidence 11 1346777877777777777777665
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.83 Score=39.92 Aligned_cols=78 Identities=17% Similarity=0.228 Sum_probs=48.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCC---CCCchhhhhccC-CeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP---GESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+||+|-..+..|.+.||+|++++.++++....-. -..+..+.++.. +. -.+.++-..+.+.+++ +.|++|-
T Consensus 7 GtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~--~~gRl~fTtd~~~a~~--~adv~fI 82 (414)
T COG1004 7 GTGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENL--ASGRLRFTTDYEEAVK--DADVVFI 82 (414)
T ss_pred CCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhcc--ccCcEEEEcCHHHHHh--cCCEEEE
Confidence 69999999999999999999999999988432111 011111111110 11 0111222234566777 8999999
Q ss_pred cccCCh
Q 022578 79 INGREA 84 (295)
Q Consensus 79 ~a~~~~ 84 (295)
+.|.+.
T Consensus 83 avgTP~ 88 (414)
T COG1004 83 AVGTPP 88 (414)
T ss_pred EcCCCC
Confidence 988643
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.16 Score=43.00 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=27.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..++..|++.|++|++.+++++..
T Consensus 8 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~ 37 (288)
T PRK09260 8 GAGVMGRGIAYVFAVSGFQTTLVDIKQEQL 37 (288)
T ss_pred CccHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence 469999999999999999999999998774
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.088 Score=45.25 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=24.7
Q ss_pred CCcCCcchHHHHHHHHHCCC-------eEEEEecCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGK 29 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~~ 29 (295)
+|++|.+|+.++..|+..+. ++.+++...
T Consensus 9 IGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~ 44 (323)
T TIGR01759 9 TGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP 44 (323)
T ss_pred ECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence 58889999999999998874 788888865
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.39 Score=41.23 Aligned_cols=92 Identities=18% Similarity=0.196 Sum_probs=57.9
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeE-EEEecCCC-hHHHHHhhhcCCCcEEEEc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~-~~~~~~~~~~~~~d~vi~~ 79 (295)
||+|.+|..+++.+...|.+|+++++++.+.... .+ -+++ ++..+-.+ .+.+.+.....++|+||++
T Consensus 151 ~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~---------~~--~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~ 219 (324)
T cd08291 151 AAASALGRMLVRLCKADGIKVINIVRRKEQVDLL---------KK--IGAEYVLNSSDPDFLEDLKELIAKLNATIFFDA 219 (324)
T ss_pred cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--cCCcEEEECCCccHHHHHHHHhCCCCCcEEEEC
Confidence 7899999999988888899999988876552111 11 1222 23222111 2334444443479999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
.|.. .....++.++...++|.++..
T Consensus 220 ~g~~--~~~~~~~~l~~~G~~v~~g~~ 244 (324)
T cd08291 220 VGGG--LTGQILLAMPYGSTLYVYGYL 244 (324)
T ss_pred CCcH--HHHHHHHhhCCCCEEEEEEec
Confidence 8743 345567777755688877654
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.12 Score=37.73 Aligned_cols=27 Identities=33% Similarity=0.517 Sum_probs=23.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEe-cCC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFT-RGK 29 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~-r~~ 29 (295)
|.|.+|.+|++.|.+.||+|..+. |+.
T Consensus 17 GaGrVG~~La~aL~~ag~~v~~v~srs~ 44 (127)
T PF10727_consen 17 GAGRVGTALARALARAGHEVVGVYSRSP 44 (127)
T ss_dssp CTSCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence 469999999999999999998875 444
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.53 Score=38.80 Aligned_cols=102 Identities=17% Similarity=0.206 Sum_probs=61.7
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCC-------C--------CchhhhhccCCeEE--EEecCCChHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------E--------SDQEFAEFSSKILH--LKGDRKDYDFV 64 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-------~--------~~~~~~~~~~~v~~--~~~D~~~~~~~ 64 (295)
|.|-+|+.+++.|...|. ++++++.+.-+. +.+.. . ....+.+..+.+++ +...+ +.+.+
T Consensus 39 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~-sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i-~~~~~ 116 (245)
T PRK05690 39 GLGGLGCAASQYLAAAGVGTLTLVDFDTVSL-SNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL-DDDEL 116 (245)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCEECc-chhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC-CHHHH
Confidence 459999999999999996 788887765442 11110 0 01223444455544 33344 34556
Q ss_pred HHhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeeccccc
Q 022578 65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVY 109 (295)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~ 109 (295)
.+.++ ++|+||.+.. +...-..+-++|. ....+|+.++.+.+
T Consensus 117 ~~~~~--~~DiVi~~~D-~~~~r~~ln~~~~~~~ip~v~~~~~g~~ 159 (245)
T PRK05690 117 AALIA--GHDLVLDCTD-NVATRNQLNRACFAAKKPLVSGAAIRME 159 (245)
T ss_pred HHHHh--cCCEEEecCC-CHHHHHHHHHHHHHhCCEEEEeeeccCC
Confidence 77888 9999999975 3443333555565 55577776554433
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.081 Score=47.59 Aligned_cols=31 Identities=29% Similarity=0.544 Sum_probs=28.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
+||+|.+|..+++.|.+.|++|++.+|+++.
T Consensus 6 IGG~G~mG~slA~~L~~~G~~V~v~~r~~~~ 36 (437)
T PRK08655 6 IGGTGGLGKWFARFLKEKGFEVIVTGRDPKK 36 (437)
T ss_pred EecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence 4789999999999999999999999998755
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.22 Score=44.74 Aligned_cols=82 Identities=13% Similarity=0.048 Sum_probs=57.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.+...|.+|+++.+++....... ..++.++ .+.++++ ..|+||.+.+.
T Consensus 261 GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-----------~~G~~vv--------~leEal~--~ADVVI~tTGt 319 (477)
T PLN02494 261 GYGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-----------MEGYQVL--------TLEDVVS--EADIFVTTTGN 319 (477)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-----------hcCCeec--------cHHHHHh--hCCEEEECCCC
Confidence 5799999999999999999999998876521111 1234332 1345667 89999997765
Q ss_pred ChhcHHHHHHhCCCCCcEEEeec
Q 022578 83 EADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
...-....++.++....++.++.
T Consensus 320 ~~vI~~e~L~~MK~GAiLiNvGr 342 (477)
T PLN02494 320 KDIIMVDHMRKMKNNAIVCNIGH 342 (477)
T ss_pred ccchHHHHHhcCCCCCEEEEcCC
Confidence 43334667777876668888775
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.057 Score=45.07 Aligned_cols=70 Identities=16% Similarity=0.117 Sum_probs=44.8
Q ss_pred CCcCCcchHHHHHHHHHCC----CeEEEEecCCCccccCCCCCCchhhhhcc---CCeEEEEecCCChHHHHHhhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~ 73 (295)
+||+|.+|..++..|+..| .+|.+++++++....... .+.... ...++.. .+++.+.++ ++
T Consensus 4 IGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~-----dl~~~~~~~~~~~i~~-----~~d~~~~~~--~a 71 (263)
T cd00650 4 IGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAM-----DLQDAVEPLADIKVSI-----TDDPYEAFK--DA 71 (263)
T ss_pred ECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHH-----HHHHhhhhccCcEEEE-----CCchHHHhC--CC
Confidence 4888999999999999988 799999988755322111 111110 0122221 122446677 99
Q ss_pred cEEEEcccC
Q 022578 74 DVVYDINGR 82 (295)
Q Consensus 74 d~vi~~a~~ 82 (295)
|+||.+++.
T Consensus 72 DiVv~t~~~ 80 (263)
T cd00650 72 DVVIITAGV 80 (263)
T ss_pred CEEEECCCC
Confidence 999998865
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.44 Score=40.70 Aligned_cols=91 Identities=18% Similarity=0.183 Sum_probs=59.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC---hHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi 77 (295)
.|++|.+|..+++.+...|.+|+++++..++... +.+ .+++.+. +..+ .+.+.+.....++|+|+
T Consensus 146 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~---------~~~--~g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~ 213 (324)
T cd08292 146 NAAGGAVGKLVAMLAAARGINVINLVRRDAGVAE---------LRA--LGIGPVV-STEQPGWQDKVREAAGGAPISVAL 213 (324)
T ss_pred cccccHHHHHHHHHHHHCCCeEEEEecCHHHHHH---------HHh--cCCCEEE-cCCCchHHHHHHHHhCCCCCcEEE
Confidence 4889999999999999999999998887765211 111 1232221 2222 23344454445799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
++.+.. .....++.++...+||.++.
T Consensus 214 d~~g~~--~~~~~~~~l~~~g~~v~~g~ 239 (324)
T cd08292 214 DSVGGK--LAGELLSLLGEGGTLVSFGS 239 (324)
T ss_pred ECCCCh--hHHHHHHhhcCCcEEEEEec
Confidence 998853 44566777775568887764
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.12 Score=48.69 Aligned_cols=80 Identities=16% Similarity=0.255 Sum_probs=59.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-+|+.+++.|.++|+++++++.+++...... ..+..++.+|.++++.++++=- .+.|.+|-+..
T Consensus 407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~-----------~~g~~v~~GDat~~~~L~~agi-~~A~~vvv~~~- 473 (621)
T PRK03562 407 GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLR-----------KFGMKVFYGDATRMDLLESAGA-AKAEVLINAID- 473 (621)
T ss_pred ecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHH-----------hcCCeEEEEeCCCHHHHHhcCC-CcCCEEEEEeC-
Confidence 5789999999999999999999999988743221 1478899999999998875332 37888888764
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
+.+....++..++
T Consensus 474 d~~~n~~i~~~ar 486 (621)
T PRK03562 474 DPQTSLQLVELVK 486 (621)
T ss_pred CHHHHHHHHHHHH
Confidence 3444555555555
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.1 Score=47.86 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=27.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|.+|..++..|++.|++|++.+++++..
T Consensus 11 G~G~MG~~iA~~la~~G~~V~v~D~~~~~~ 40 (495)
T PRK07531 11 GGGVIGGGWAARFLLAGIDVAVFDPHPEAE 40 (495)
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 589999999999999999999999988763
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.14 Score=44.31 Aligned_cols=83 Identities=18% Similarity=0.126 Sum_probs=56.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|.+..... . ..++. ..++.++++ ++|+|+.+...
T Consensus 157 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~-----------~~~~~--------~~~l~ell~--~aDiV~l~lP~ 214 (333)
T PRK13243 157 GFGRIGQAVARRAKGFGMRILYYSRTRKPEAE-K-----------ELGAE--------YRPLEELLR--ESDFVSLHVPL 214 (333)
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCCChhhH-H-----------HcCCE--------ecCHHHHHh--hCCEEEEeCCC
Confidence 57999999999999999999999987544110 0 01111 124667888 89999988765
Q ss_pred ChhcHH-----HHHHhCCCCCcEEEeecccc
Q 022578 83 EADEVE-----PILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~-----~ll~~~~~~~~~i~~Ss~~v 108 (295)
+. .++ ..++.++....+|.+|...+
T Consensus 215 t~-~T~~~i~~~~~~~mk~ga~lIN~aRg~~ 244 (333)
T PRK13243 215 TK-ETYHMINEERLKLMKPTAILVNTARGKV 244 (333)
T ss_pred Ch-HHhhccCHHHHhcCCCCeEEEECcCchh
Confidence 43 233 34555665568888887665
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.031 Score=42.41 Aligned_cols=67 Identities=12% Similarity=0.063 Sum_probs=42.5
Q ss_pred CcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|+ |.+|..+++.|.+.| ++|++.+|++....+... . . +...+..+..+.+ +.++ ++|+||++.
T Consensus 26 G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~--------~-~-~~~~~~~~~~~~~---~~~~--~~Dvvi~~~ 89 (155)
T cd01065 26 GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAE--------R-F-GELGIAIAYLDLE---ELLA--EADLIINTT 89 (155)
T ss_pred CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH--------H-H-hhcccceeecchh---hccc--cCCEEEeCc
Confidence 54 899999999999995 889999998765321110 0 0 1111122333333 3466 899999998
Q ss_pred cCCh
Q 022578 81 GREA 84 (295)
Q Consensus 81 ~~~~ 84 (295)
....
T Consensus 90 ~~~~ 93 (155)
T cd01065 90 PVGM 93 (155)
T ss_pred CCCC
Confidence 7643
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.34 Score=36.95 Aligned_cols=74 Identities=14% Similarity=0.116 Sum_probs=49.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|=|.+|+.+++.|...|.+|++...+|-.. +++...+++... +++++. ..|++|.+.|.
T Consensus 30 GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~a-----------lqA~~dGf~v~~--------~~~a~~--~adi~vtaTG~ 88 (162)
T PF00670_consen 30 GYGKVGKGIARALRGLGARVTVTEIDPIRA-----------LQAAMDGFEVMT--------LEEALR--DADIFVTATGN 88 (162)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEE-SSHHHH-----------HHHHHTT-EEE---------HHHHTT--T-SEEEE-SSS
T ss_pred CCCcccHHHHHHHhhCCCEEEEEECChHHH-----------HHhhhcCcEecC--------HHHHHh--hCCEEEECCCC
Confidence 348999999999999999999999988663 244456776542 556787 89999999887
Q ss_pred ChhcHHHHHHhCCCC
Q 022578 83 EADEVEPILDALPNL 97 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~ 97 (295)
...-+..-++.++..
T Consensus 89 ~~vi~~e~~~~mkdg 103 (162)
T PF00670_consen 89 KDVITGEHFRQMKDG 103 (162)
T ss_dssp SSSB-HHHHHHS-TT
T ss_pred ccccCHHHHHHhcCC
Confidence 555566777778743
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.17 Score=43.29 Aligned_cols=69 Identities=20% Similarity=0.271 Sum_probs=42.8
Q ss_pred cCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|+|.+|+.++..|+..| ++|.+++|+++..........+ .... ..+..+.. .+.+ .++ ++|+||.+
T Consensus 7 GaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~--~~~~~~~~~~i~~---~~~~----~l~--~aDIVIit 75 (306)
T cd05291 7 GAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLED--ALAFLPSPVKIKA---GDYS----DCK--DADIVVIT 75 (306)
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHH--HhhccCCCeEEEc---CCHH----HhC--CCCEEEEc
Confidence 36999999999999998 6899999987764322111000 0000 11222322 2222 345 99999999
Q ss_pred ccC
Q 022578 80 NGR 82 (295)
Q Consensus 80 a~~ 82 (295)
+|.
T Consensus 76 ag~ 78 (306)
T cd05291 76 AGA 78 (306)
T ss_pred cCC
Confidence 987
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.24 Score=44.61 Aligned_cols=82 Identities=11% Similarity=-0.025 Sum_probs=55.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++..+++...... ...+++++ .+.++++ ..|+|+.+.+.
T Consensus 261 G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-----------~~~G~~~~--------~leell~--~ADIVI~atGt 319 (476)
T PTZ00075 261 GYGDVGKGCAQALRGFGARVVVTEIDPICALQA-----------AMEGYQVV--------TLEDVVE--TADIFVTATGN 319 (476)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-----------HhcCceec--------cHHHHHh--cCCEEEECCCc
Confidence 578999999999999999999998886652111 01233322 2456777 89999998764
Q ss_pred ChhcHHHHHHhCCCCCcEEEeec
Q 022578 83 EADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
...-....++.++....+|.++-
T Consensus 320 ~~iI~~e~~~~MKpGAiLINvGr 342 (476)
T PTZ00075 320 KDIITLEHMRRMKNNAIVGNIGH 342 (476)
T ss_pred ccccCHHHHhccCCCcEEEEcCC
Confidence 32233456666775557777653
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.17 Score=44.58 Aligned_cols=85 Identities=18% Similarity=0.082 Sum_probs=56.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.+|...... ... ..++. -..+++++++ .+|+|+.+...
T Consensus 199 G~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~-~~~----------~~g~~-------~~~~l~ell~--~aDvV~l~lPl 258 (385)
T PRK07574 199 GAGRIGLAVLRRLKPFDVKLHYTDRHRLPEE-VEQ----------ELGLT-------YHVSFDSLVS--VCDVVTIHCPL 258 (385)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEECCCCCchh-hHh----------hcCce-------ecCCHHHHhh--cCCEEEEcCCC
Confidence 5799999999999999999999998763311 000 01221 1234678888 99999988765
Q ss_pred ChhcHHHH-----HHhCCCCCcEEEeecccc
Q 022578 83 EADEVEPI-----LDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~~l-----l~~~~~~~~~i~~Ss~~v 108 (295)
+. .++.+ +..++...-||.+|...+
T Consensus 259 t~-~T~~li~~~~l~~mk~ga~lIN~aRG~i 288 (385)
T PRK07574 259 HP-ETEHLFDADVLSRMKRGSYLVNTARGKI 288 (385)
T ss_pred CH-HHHHHhCHHHHhcCCCCcEEEECCCCch
Confidence 43 34444 445565557887776554
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.25 Score=42.72 Aligned_cols=81 Identities=15% Similarity=0.136 Sum_probs=53.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|.+.... ..+. -.+++.++++ ++|+|+.+...
T Consensus 153 G~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~---------------~~~~-------~~~~l~ell~--~aDiVil~lP~ 208 (330)
T PRK12480 153 GTGRIGAATAKIYAGFGATITAYDAYPNKDL---------------DFLT-------YKDSVKEAIK--DADIISLHVPA 208 (330)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEeCChhHhh---------------hhhh-------ccCCHHHHHh--cCCEEEEeCCC
Confidence 5799999999999999999999998865411 0011 1124667888 89999977765
Q ss_pred ChhcHHH-----HHHhCCCCCcEEEeecccc
Q 022578 83 EADEVEP-----ILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~~-----ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ ++. ++..++...-+|.+|-..+
T Consensus 209 t~~-t~~li~~~~l~~mk~gavlIN~aRG~~ 238 (330)
T PRK12480 209 NKE-SYHLFDKAMFDHVKKGAILVNAARGAV 238 (330)
T ss_pred cHH-HHHHHhHHHHhcCCCCcEEEEcCCccc
Confidence 432 333 3344554446666665443
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.25 Score=43.73 Aligned_cols=83 Identities=7% Similarity=-0.022 Sum_probs=54.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||..+++.+...|.+|+++.+++.+.... ...++.++ + +.++++ +.|+||.+.|.
T Consensus 202 G~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-----------~~~G~~v~-----~---leeal~--~aDVVItaTG~ 260 (406)
T TIGR00936 202 GYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-----------AMDGFRVM-----T---MEEAAK--IGDIFITATGN 260 (406)
T ss_pred CCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-----------HhcCCEeC-----C---HHHHHh--cCCEEEECCCC
Confidence 689999999999999999999999887652111 11344332 1 234566 89999998764
Q ss_pred ChhcHHHHHHhCCCCCcEEEeecc
Q 022578 83 EADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
...-....+..+++...+++++..
T Consensus 261 ~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 261 KDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred HHHHHHHHHhcCCCCcEEEEECCC
Confidence 322233455666655677777654
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.37 Score=42.52 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=62.2
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCCC---------C--CCchhhhhccCCeEE--EEecCCChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP---------G--ESDQEFAEFSSKILH--LKGDRKDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~---------~--~~~~~~~~~~~~v~~--~~~D~~~~~~~~ 65 (295)
|.|-+|+.++..|...|. ++++++++.-.. ..+.. + .....+.+..+.+++ +...+ +.+.+.
T Consensus 142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~-~~~~~~ 220 (376)
T PRK08762 142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV-TSDNVE 220 (376)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC-ChHHHH
Confidence 568899999999999997 788888873221 11100 0 011122333354544 33333 345667
Q ss_pred HhhhcCCCcEEEEcccCChhcHHH-HHHhCC-CCCcEEEeecccccc
Q 022578 66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~-ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
.+++ ++|+||++... .. ++. +-++|. ....+|+.+..+.+|
T Consensus 221 ~~~~--~~D~Vv~~~d~-~~-~r~~ln~~~~~~~ip~i~~~~~g~~g 263 (376)
T PRK08762 221 ALLQ--DVDVVVDGADN-FP-TRYLLNDACVKLGKPLVYGAVFRFEG 263 (376)
T ss_pred HHHh--CCCEEEECCCC-HH-HHHHHHHHHHHcCCCEEEEEeccCEE
Confidence 7888 89999999764 22 343 445555 556888887655443
|
|
| >COG1255 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.52 Score=33.33 Aligned_cols=66 Identities=18% Similarity=0.248 Sum_probs=53.6
Q ss_pred HHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccCChhcHHH
Q 022578 10 FLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEP 89 (295)
Q Consensus 10 ~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~ 89 (295)
.++++|.++|++|.+++-.++..+ .+++++..|+++|.- ++.+ +.|.|+..-. .++....
T Consensus 27 ~VA~~L~e~g~dv~atDI~~~~a~---------------~g~~~v~DDitnP~~--~iY~--~A~lIYSiRp-ppEl~~~ 86 (129)
T COG1255 27 DVAKRLAERGFDVLATDINEKTAP---------------EGLRFVVDDITNPNI--SIYE--GADLIYSIRP-PPELQSA 86 (129)
T ss_pred HHHHHHHHcCCcEEEEecccccCc---------------ccceEEEccCCCccH--HHhh--CccceeecCC-CHHHHHH
Confidence 578999999999999998877532 478999999999974 6777 9999998764 3567777
Q ss_pred HHHhCC
Q 022578 90 ILDALP 95 (295)
Q Consensus 90 ll~~~~ 95 (295)
+++.++
T Consensus 87 ildva~ 92 (129)
T COG1255 87 ILDVAK 92 (129)
T ss_pred HHHHHH
Confidence 888877
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.45 Score=41.67 Aligned_cols=89 Identities=15% Similarity=0.147 Sum_probs=57.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|..+++.+...|.+|++++.+..+...... + -+++.+. |..+.+.+.+... ++|+||.+.|.
T Consensus 191 G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~--------~--~Ga~~vi-~~~~~~~~~~~~~--~~D~vid~~g~ 257 (360)
T PLN02586 191 GLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN--------R--LGADSFL-VSTDPEKMKAAIG--TMDYIIDTVSA 257 (360)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH--------h--CCCcEEE-cCCCHHHHHhhcC--CCCEEEECCCC
Confidence 56999999999888889999888776654211110 1 2333222 2334445555554 79999999883
Q ss_pred ChhcHHHHHHhCCCCCcEEEeec
Q 022578 83 EADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
.......++.++...+++.++.
T Consensus 258 -~~~~~~~~~~l~~~G~iv~vG~ 279 (360)
T PLN02586 258 -VHALGPLLGLLKVNGKLITLGL 279 (360)
T ss_pred -HHHHHHHHHHhcCCcEEEEeCC
Confidence 3345667777875568887763
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.62 Score=40.32 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=58.4
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC---hHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~v 76 (295)
+||+|.+|..+++.+...|. +|+++++++++.... .+. -+++.+. |..+ .+.+.++.. .++|+|
T Consensus 161 ~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~---------~~~-lGa~~vi-~~~~~~~~~~i~~~~~-~gvd~v 228 (345)
T cd08293 161 SGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLL---------KSE-LGFDAAI-NYKTDNVAERLRELCP-EGVDVY 228 (345)
T ss_pred ECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH---------HHh-cCCcEEE-ECCCCCHHHHHHHHCC-CCceEE
Confidence 48899999999988888898 799998876652111 110 1222221 2222 233333332 479999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
|++.+.. .....++.++...++|.++..
T Consensus 229 id~~g~~--~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 229 FDNVGGE--ISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred EECCCcH--HHHHHHHHhccCCEEEEEeee
Confidence 9998753 356677777766688887754
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.5 Score=40.12 Aligned_cols=92 Identities=15% Similarity=0.160 Sum_probs=58.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+|++|.+|..+++.+...|.+|+++++++.+.... .. .+++.+ .|..++ +.+.......++|.++
T Consensus 151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi 218 (325)
T cd08253 151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAELV---------RQ--AGADAV-FNYRAEDLADRILAATAGQGVDVII 218 (325)
T ss_pred EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--cCCCEE-EeCCCcCHHHHHHHHcCCCceEEEE
Confidence 47889999999999999999999998876552111 11 122222 233333 3333444435799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
++++.. ......+.+....+++.+++.
T Consensus 219 ~~~~~~--~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 219 EVLANV--NLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred ECCchH--HHHHHHHhhCCCCEEEEEeec
Confidence 998653 344445556655688887764
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.31 Score=41.67 Aligned_cols=92 Identities=22% Similarity=0.195 Sum_probs=59.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh-HHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~ 79 (295)
.|++|.+|..+++.+...|.+|+++++++++.... .+ -+++.+ .|..+. ..+.......++|.|+++
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (325)
T cd05280 153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL---------KS--LGASEV-LDREDLLDESKKPLLKARWAGAIDT 220 (325)
T ss_pred ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------Hh--cCCcEE-EcchhHHHHHHHHhcCCCccEEEEC
Confidence 47889999999998888899999998887652211 11 122222 122222 123333333479999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
.+. ......++++....++|.++..
T Consensus 221 ~~~--~~~~~~~~~l~~~g~~v~~g~~ 245 (325)
T cd05280 221 VGG--DVLANLLKQTKYGGVVASCGNA 245 (325)
T ss_pred Cch--HHHHHHHHhhcCCCEEEEEecC
Confidence 774 3567777777755688887754
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.23 Score=43.33 Aligned_cols=60 Identities=17% Similarity=0.092 Sum_probs=46.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
|+|.+|..++..+.+.|++|++++.++......+ .-+.+.+|+.|.+.+.++.+ .+|+|.
T Consensus 6 G~gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~-------------ad~~~~~~~~d~~~i~~~a~--~~dvit 65 (352)
T TIGR01161 6 GGGQLGRMLALAARPLGIKVHVLDPDANSPAVQV-------------ADHVVLAPFFDPAAIRELAE--SCDVIT 65 (352)
T ss_pred CCCHHHHHHHHHHHHcCCEEEEECCCCCCChhHh-------------CceeEeCCCCCHHHHHHHHh--hCCEEE
Confidence 3589999999999999999999988776532221 12345678899999999998 788774
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.25 Score=41.86 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=27.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|.+|..++..|+++|++|++.+|+++..
T Consensus 11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (292)
T PRK07530 11 GAGQMGNGIAHVCALAGYDVLLNDVSADRL 40 (292)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 579999999999999999999999987663
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.05 Score=48.59 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=28.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA 33 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 33 (295)
|.|++|..++..|.++|++|+++++++.+..
T Consensus 10 GlG~~G~~~A~~La~~G~~V~~~D~~~~~v~ 40 (415)
T PRK11064 10 GLGYIGLPTAAAFASRQKQVIGVDINQHAVD 40 (415)
T ss_pred CcchhhHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 5899999999999999999999999987743
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.35 Score=42.11 Aligned_cols=96 Identities=14% Similarity=0.099 Sum_probs=57.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-||+.+++.|..-|.+|++.+|.......... .++ ...+.-+........++++++. .+|+|+.+...
T Consensus 166 G~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~L~ell~--~aDiVvl~lPl 236 (347)
T PLN02928 166 GYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGL-----LIP--NGDVDDLVDEKGGHEDIYEFAG--EADIVVLCCTL 236 (347)
T ss_pred CCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhh-----ccc--cccccccccccCcccCHHHHHh--hCCEEEECCCC
Confidence 67999999999999999999999886432110000 000 0000100001113456889999 99999988776
Q ss_pred ChhcHHH-----HHHhCCCCCcEEEeecccc
Q 022578 83 EADEVEP-----ILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~~-----ll~~~~~~~~~i~~Ss~~v 108 (295)
+. .++. .+..++....||.++-..+
T Consensus 237 t~-~T~~li~~~~l~~Mk~ga~lINvaRG~l 266 (347)
T PLN02928 237 TK-ETAGIVNDEFLSSMKKGALLVNIARGGL 266 (347)
T ss_pred Ch-HhhcccCHHHHhcCCCCeEEEECCCccc
Confidence 53 3444 3444555557777775444
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.23 Score=42.13 Aligned_cols=76 Identities=14% Similarity=0.063 Sum_probs=48.4
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
.||+|+.|..|++.|..+. .++..++.+... +..+ ..++++ ++|++|.+
T Consensus 7 vGasGy~G~el~rlL~~HP~~el~~l~s~~~~-------------------------~~~~---~~~~~~--~~D~vFla 56 (310)
T TIGR01851 7 DGEAGTTGLQIRERLSGRDDIELLSIAPDRRK-------------------------DAAE---RAKLLN--AADVAILC 56 (310)
T ss_pred ECCCChhHHHHHHHHhCCCCeEEEEEeccccc-------------------------CcCC---HhHhhc--CCCEEEEC
Confidence 4999999999999999984 466655433211 0112 234556 89999988
Q ss_pred ccCChhcHHHHHHhCC-CCCcEEEeecccc
Q 022578 80 NGREADEVEPILDALP-NLEQFIYCSSAGV 108 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v 108 (295)
.+. .....++..+. ...++|=+|+..-
T Consensus 57 lp~--~~s~~~~~~~~~~g~~VIDlSadfR 84 (310)
T TIGR01851 57 LPD--DAAREAVSLVDNPNTCIIDASTAYR 84 (310)
T ss_pred CCH--HHHHHHHHHHHhCCCEEEECChHHh
Confidence 743 34445555543 4457888887553
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=93.11 E-value=1.1 Score=39.29 Aligned_cols=102 Identities=13% Similarity=0.111 Sum_probs=63.1
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCC---------------CCchhhhhccCCeEE--EEecCCChHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------------ESDQEFAEFSSKILH--LKGDRKDYDFV 64 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~v~~--~~~D~~~~~~~ 64 (295)
|.|-+|+.++..|...|. ++++++.+.-.. +.+.. .....+.+..+.+++ +...++ .+..
T Consensus 35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~-sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~-~~~~ 112 (355)
T PRK05597 35 GAGGLGSPALLYLAGAGVGHITIIDDDTVDL-SNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT-WSNA 112 (355)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcc-cccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC-HHHH
Confidence 578999999999999996 788888775331 11110 011123344455544 344443 4556
Q ss_pred HHhhhcCCCcEEEEcccCChhcHHHHH-HhCC-CCCcEEEeecccccc
Q 022578 65 KSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~i~~Ss~~v~~ 110 (295)
.+.++ ++|+||.+... . .++.++ ++|. ....+|+.+..+.+|
T Consensus 113 ~~~~~--~~DvVvd~~d~-~-~~r~~~n~~c~~~~ip~v~~~~~g~~g 156 (355)
T PRK05597 113 LDELR--DADVILDGSDN-F-DTRHLASWAAARLGIPHVWASILGFDA 156 (355)
T ss_pred HHHHh--CCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence 67888 99999999753 2 344444 4455 556788877655554
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.49 Score=40.50 Aligned_cols=91 Identities=15% Similarity=0.105 Sum_probs=58.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|.+|..+++.+...|.+|+++++++.+.... .+ .+++.+ .|..+ .+.+... ...++|+|++
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~v-~~~~~~~~~~~~~~-~~~~~d~vld 219 (326)
T cd08289 153 TGATGGVGSLAVSILAKLGYEVVASTGKADAADYL---------KK--LGAKEV-IPREELQEESIKPL-EKQRWAGAVD 219 (326)
T ss_pred EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH---------HH--cCCCEE-EcchhHHHHHHHhh-ccCCcCEEEE
Confidence 47889999999999999999999998887662211 11 122222 11122 2333333 2347999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+.+. ......+.+++...++|.++..
T Consensus 220 ~~g~--~~~~~~~~~l~~~G~~i~~g~~ 245 (326)
T cd08289 220 PVGG--KTLAYLLSTLQYGGSVAVSGLT 245 (326)
T ss_pred CCcH--HHHHHHHHHhhcCCEEEEEeec
Confidence 9874 3566677777766688888754
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.56 Score=39.90 Aligned_cols=93 Identities=19% Similarity=0.183 Sum_probs=59.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCe-EEEEecCCC-hHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~-~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|.+|..+++.+...|.+|++++++..+.... .. .++ .++..+..+ .+.+.......++|.+++
T Consensus 151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 219 (328)
T cd08268 151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL---------LA--LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFD 219 (328)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH---------HH--cCCCEEEecCCccHHHHHHHHhCCCCceEEEE
Confidence 48899999999999999999999998876552211 11 112 222222111 233444443347999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+.+. ......++++....+++.++..
T Consensus 220 ~~~~--~~~~~~~~~l~~~g~~v~~g~~ 245 (328)
T cd08268 220 PVGG--PQFAKLADALAPGGTLVVYGAL 245 (328)
T ss_pred CCch--HhHHHHHHhhccCCEEEEEEeC
Confidence 9875 4566677777755688877643
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.59 Score=39.91 Aligned_cols=92 Identities=23% Similarity=0.148 Sum_probs=59.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+|++|.+|..+++.+...|.+|++++++++.... + .+ -++..+ .|..+. +.+.......++|.|+
T Consensus 149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~-~--------~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl 216 (324)
T cd08244 149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL-V--------RA--LGADVA-VDYTRPDWPDQVREALGGGGVTVVL 216 (324)
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HH--cCCCEE-EecCCccHHHHHHHHcCCCCceEEE
Confidence 4789999999999999999999999887765211 1 11 122221 122232 3333344334799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
++.+.. .....++++....++|.++..
T Consensus 217 ~~~g~~--~~~~~~~~l~~~g~~v~~g~~ 243 (324)
T cd08244 217 DGVGGA--IGRAALALLAPGGRFLTYGWA 243 (324)
T ss_pred ECCChH--hHHHHHHHhccCcEEEEEecC
Confidence 998753 346677777755688888754
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.5 Score=41.86 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=49.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-+|+.+++.|.++|++|.+++.+... ... ..+..++.+|.+|++.++++=- .+.+.|+-+...
T Consensus 247 G~g~lg~~v~~~L~~~g~~vvVId~d~~~--~~~-----------~~g~~vI~GD~td~e~L~~AgI-~~A~aVI~~t~d 312 (393)
T PRK10537 247 GHSPLAINTYLGLRQRGQAVTVIVPLGLE--HRL-----------PDDADLIPGDSSDSAVLKKAGA-ARARAILALRDN 312 (393)
T ss_pred CCChHHHHHHHHHHHCCCCEEEEECchhh--hhc-----------cCCCcEEEeCCCCHHHHHhcCc-ccCCEEEEcCCC
Confidence 57889999999999999999988865222 111 2568899999999988876443 388888876654
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.25 Score=42.71 Aligned_cols=94 Identities=18% Similarity=0.232 Sum_probs=52.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|+|-+|..++..|++.|++|++..|++......... .. . ..+..+... ...+.-.++..++++ ++|+||-+...
T Consensus 11 G~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~-~~-~-~~~~~g~~~-~~~~~~~~~~~e~~~--~aD~Vi~~v~~ 84 (328)
T PRK14618 11 GAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAE-RE-N-REYLPGVAL-PAELYPTADPEEALA--GADFAVVAVPS 84 (328)
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHh-Cc-c-cccCCCCcC-CCCeEEeCCHHHHHc--CCCEEEEECch
Confidence 579999999999999999999999976542111000 00 0 000011110 000111122345566 89999988754
Q ss_pred ChhcHHHHHHhCCCCCcEEEee
Q 022578 83 EADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~S 104 (295)
. .++.+++.++....+|.++
T Consensus 85 ~--~~~~v~~~l~~~~~vi~~~ 104 (328)
T PRK14618 85 K--ALRETLAGLPRALGYVSCA 104 (328)
T ss_pred H--HHHHHHHhcCcCCEEEEEe
Confidence 4 4677777766333444443
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.31 Score=41.26 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=27.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|++.|++|++.+|++++.
T Consensus 3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~ 32 (288)
T TIGR01692 3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAV 32 (288)
T ss_pred cccHhHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 589999999999999999999999987763
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.77 Score=39.38 Aligned_cols=94 Identities=18% Similarity=0.173 Sum_probs=59.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCe-EEEEecCCCh-HHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDY-DFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~-~~~~~~~~~~~~d~vi~ 78 (295)
.|++|-+|..+++.+...|.+|+++++++++.... .+ -++ .++..+-.+. +.+..... .++|.|++
T Consensus 146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~ 213 (329)
T cd08250 146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL---------KS--LGCDRPINYKTEDLGEVLKKEYP-KGVDVVYE 213 (329)
T ss_pred EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH---------HH--cCCceEEeCCCccHHHHHHHhcC-CCCeEEEE
Confidence 37899999999998888999999998876552111 11 122 2222221111 22333222 47999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeecccc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+. ......++.+....++|.+++...
T Consensus 214 ~~g~--~~~~~~~~~l~~~g~~v~~g~~~~ 241 (329)
T cd08250 214 SVGG--EMFDTCVDNLALKGRLIVIGFISG 241 (329)
T ss_pred CCcH--HHHHHHHHHhccCCeEEEEecccC
Confidence 9873 456666777776668998876543
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.37 Score=41.41 Aligned_cols=78 Identities=17% Similarity=0.110 Sum_probs=52.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-||+.+++.|..-|.+|++.+|.... ..+ +..+++++++ ..|+|+.+...
T Consensus 155 G~G~IG~~vA~~l~~fgm~V~~~~~~~~~-----------------~~~--------~~~~l~ell~--~sDiv~l~lPl 207 (317)
T PRK06487 155 GHGELGGAVARLAEAFGMRVLIGQLPGRP-----------------ARP--------DRLPLDELLP--QVDALTLHCPL 207 (317)
T ss_pred CCCHHHHHHHHHHhhCCCEEEEECCCCCc-----------------ccc--------cccCHHHHHH--hCCEEEECCCC
Confidence 57999999999998889999998875322 111 1125778898 89999987765
Q ss_pred ChhcHHHH-----HHhCCCCCcEEEeecccc
Q 022578 83 EADEVEPI-----LDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~~l-----l~~~~~~~~~i~~Ss~~v 108 (295)
+. .|+.+ +..++....||.+|-..+
T Consensus 208 t~-~T~~li~~~~~~~mk~ga~lIN~aRG~v 237 (317)
T PRK06487 208 TE-HTRHLIGARELALMKPGALLINTARGGL 237 (317)
T ss_pred Ch-HHhcCcCHHHHhcCCCCeEEEECCCccc
Confidence 43 34443 444555557777775444
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.96 E-value=1.3 Score=36.09 Aligned_cols=104 Identities=19% Similarity=0.253 Sum_probs=64.6
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCCC---CCCc---------hhhhhccCCeEE--EEecCCChHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP---GESD---------QEFAEFSSKILH--LKGDRKDYDFV 64 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~---~~~~---------~~~~~~~~~v~~--~~~D~~~~~~~ 64 (295)
|.|-+|+.++..|...|. ++++++.+.-+. ..+.. .... ..+.+..+.+++ +...+ +.+.+
T Consensus 34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~-~~~~~ 112 (231)
T PRK08328 34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL-SEENI 112 (231)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC-CHHHH
Confidence 578999999999999995 788887665442 11110 0001 112333344443 44444 44557
Q ss_pred HHhhhcCCCcEEEEcccCChhcHHHHHH-hCC-CCCcEEEeeccccccC
Q 022578 65 KSSLSAKGFDVVYDINGREADEVEPILD-ALP-NLEQFIYCSSAGVYLK 111 (295)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~~~~~~~ll~-~~~-~~~~~i~~Ss~~v~~~ 111 (295)
.++++ ++|+||.+... . .++.++. +|. ....+|+.++.+.||.
T Consensus 113 ~~~l~--~~D~Vid~~d~-~-~~r~~l~~~~~~~~ip~i~g~~~g~~G~ 157 (231)
T PRK08328 113 DEVLK--GVDVIVDCLDN-F-ETRYLLDDYAHKKGIPLVHGAVEGTYGQ 157 (231)
T ss_pred HHHHh--cCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence 77888 99999999764 3 3455554 455 5568888887777664
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.53 Score=39.88 Aligned_cols=93 Identities=18% Similarity=0.188 Sum_probs=57.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+|++|-+|..+++.+...|.+|++++++....... .+ .+++.+ .+..+. +.+.......++|.++
T Consensus 146 ~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi 213 (323)
T cd05276 146 HGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC---------RA--LGADVA-INYRTEDFAEEVKEATGGRGVDVIL 213 (323)
T ss_pred EcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH---------HH--cCCCEE-EeCCchhHHHHHHHHhCCCCeEEEE
Confidence 48889999999999999999999988876542110 11 112211 222222 3333344334799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
++++.. .....++.+....+++.++...
T Consensus 214 ~~~g~~--~~~~~~~~~~~~g~~i~~~~~~ 241 (323)
T cd05276 214 DMVGGD--YLARNLRALAPDGRLVLIGLLG 241 (323)
T ss_pred ECCchH--HHHHHHHhhccCCEEEEEecCC
Confidence 998743 2445556666455788776543
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.083 Score=42.77 Aligned_cols=31 Identities=29% Similarity=0.343 Sum_probs=28.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
+||+|.+|+.++..|.+.|++|++.+|++++
T Consensus 6 IGG~G~mG~ala~~L~~~G~~V~v~~r~~~~ 36 (219)
T TIGR01915 6 LGGTGDQGKGLALRLAKAGNKIIIGSRDLEK 36 (219)
T ss_pred EcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence 3789999999999999999999999998766
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.29 Score=43.46 Aligned_cols=65 Identities=17% Similarity=0.039 Sum_probs=49.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|+|..|..++..+.+.|++|++++..+....... .-.++..|..|.+.+.++.++.++|.|+...
T Consensus 19 G~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~~~~id~vi~~~ 83 (395)
T PRK09288 19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------------AHRSHVIDMLDGDALRAVIEREKPDYIVPEI 83 (395)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh-------------hhheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence 3578899999999999999999998876522111 1135667888999999999888999998653
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.4 Score=43.32 Aligned_cols=64 Identities=13% Similarity=0.049 Sum_probs=45.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-CCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~d~vi~~a~ 81 (295)
.||-.|.+|++.+..+|++|++++-.... . . ..+++++.++ ..+++.+++.+ ...|++|++|+
T Consensus 280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~--~-----------p~~v~~i~V~--ta~eM~~av~~~~~~Di~I~aAA 343 (475)
T PRK13982 280 SSGKQGFAIAAAAAAAGAEVTLISGPVDL-A--D-----------PQGVKVIHVE--SARQMLAAVEAALPADIAIFAAA 343 (475)
T ss_pred CchHHHHHHHHHHHHCCCcEEEEeCCcCC-C--C-----------CCCceEEEec--CHHHHHHHHHhhCCCCEEEEecc
Confidence 68999999999999999999998743221 1 1 1467777654 44444444432 35799999998
Q ss_pred C
Q 022578 82 R 82 (295)
Q Consensus 82 ~ 82 (295)
+
T Consensus 344 V 344 (475)
T PRK13982 344 V 344 (475)
T ss_pred c
Confidence 7
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.11 Score=44.21 Aligned_cols=29 Identities=24% Similarity=0.469 Sum_probs=26.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..+++.|.+.|++|++.+|+++.
T Consensus 9 G~G~mG~~~a~~l~~~g~~v~~~d~~~~~ 37 (296)
T PRK11559 9 GLGIMGKPMSKNLLKAGYSLVVYDRNPEA 37 (296)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence 47999999999999999999999988766
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.47 Score=41.43 Aligned_cols=89 Identities=19% Similarity=0.247 Sum_probs=49.3
Q ss_pred CCcCCcchHHHHHHHHHC-CCe---EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
.||||++|+.+++.|+++ .++ ++.++...+. . .... ..+-.....+..+++. +. ++|+|
T Consensus 7 VGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg-~-~~~~---------f~g~~~~v~~~~~~~~----~~--~~Div 69 (369)
T PRK06598 7 VGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAG-G-AAPS---------FGGKEGTLQDAFDIDA----LK--KLDII 69 (369)
T ss_pred EeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhC-C-cccc---------cCCCcceEEecCChhH----hc--CCCEE
Confidence 499999999999966665 565 6665543222 1 1110 0121223334444433 35 89999
Q ss_pred EEcccCChhcHHHHHHhC-C-CC-CcEEEeecccc
Q 022578 77 YDINGREADEVEPILDAL-P-NL-EQFIYCSSAGV 108 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~-~-~~-~~~i~~Ss~~v 108 (295)
|.+++.. ..+.++..+ + |. ..+|=.||..-
T Consensus 70 f~a~~~~--~s~~~~~~~~~aG~~~~VID~Ss~fR 102 (369)
T PRK06598 70 ITCQGGD--YTNEVYPKLRAAGWQGYWIDAASTLR 102 (369)
T ss_pred EECCCHH--HHHHHHHHHHhCCCCeEEEECChHHh
Confidence 9998643 445555544 3 54 24666665443
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.57 Score=38.65 Aligned_cols=93 Identities=19% Similarity=0.282 Sum_probs=57.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHH--hhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS--SLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~--~~~~~~~d~vi~ 78 (295)
+|+++ +|..+++.+...|.+|+++++++..... + ... ....++ |..+.+.... .....++|++++
T Consensus 141 ~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~-~--------~~~-g~~~~~--~~~~~~~~~~~~~~~~~~~d~vi~ 207 (271)
T cd05188 141 LGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL-A--------KEL-GADHVI--DYKEEDLEEELRLTGGGGADVVID 207 (271)
T ss_pred ECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH-H--------HHh-CCceec--cCCcCCHHHHHHHhcCCCCCEEEE
Confidence 47778 9999999998899999999887654211 0 111 111122 2222222222 223347999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
+++.. .....+++.++...+++.++...
T Consensus 208 ~~~~~-~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 208 AVGGP-ETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred CCCCH-HHHHHHHHhcccCCEEEEEccCC
Confidence 98752 34566777777556888877654
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.3 Score=41.64 Aligned_cols=30 Identities=27% Similarity=0.492 Sum_probs=27.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|++.|++|.+.+|+++..
T Consensus 7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~~ 36 (301)
T PRK09599 7 GLGRMGGNMARRLLRGGHEVVGYDRNPEAV 36 (301)
T ss_pred cccHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 589999999999999999999999987663
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=92.79 E-value=1.5 Score=34.88 Aligned_cols=102 Identities=17% Similarity=0.153 Sum_probs=61.0
Q ss_pred CCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCCC-------C----CCchhhhhccCCeEE--EEecCCChHHHHH
Q 022578 4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP-------G----ESDQEFAEFSSKILH--LKGDRKDYDFVKS 66 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~-------~----~~~~~~~~~~~~v~~--~~~D~~~~~~~~~ 66 (295)
.|-+|..+++.|...|. ++++++.+.-.. ..+.. + .....+.+..+.+++ +...+. +...+
T Consensus 29 ~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~--~~~~~ 106 (197)
T cd01492 29 LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDIS--EKPEE 106 (197)
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCcc--ccHHH
Confidence 45599999999999996 688888764331 11110 0 011123444455444 333443 22345
Q ss_pred hhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccccc
Q 022578 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
.++ ++|+||.+.. +......+-+.|. ....+|+.++.+.+|
T Consensus 107 ~~~--~~dvVi~~~~-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G 148 (197)
T cd01492 107 FFS--QFDVVVATEL-SRAELVKINELCRKLGVKFYATGVHGLFG 148 (197)
T ss_pred HHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEecCCEE
Confidence 677 8999998754 4444555556666 445788888776654
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.61 Score=39.24 Aligned_cols=103 Identities=13% Similarity=0.041 Sum_probs=62.1
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCCC---C--------CCchhhhhccCCeEE--EEecCCChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP---G--------ESDQEFAEFSSKILH--LKGDRKDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~---~--------~~~~~~~~~~~~v~~--~~~D~~~~~~~~ 65 (295)
|.|-+|+.++..|...|. ++++++.+.-.. ..+.. . .....+.+..+.+++ +...++ .+.+.
T Consensus 34 G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~-~~n~~ 112 (287)
T PRK08223 34 GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIG-KENAD 112 (287)
T ss_pred CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccC-ccCHH
Confidence 578899999999999986 778777775442 11111 0 011123444455554 444443 45567
Q ss_pred HhhhcCCCcEEEEcccCChhcHHHHH-HhCC-CCCcEEEeecccc
Q 022578 66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGV 108 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~i~~Ss~~v 108 (295)
++++ ++|+||++.-.....++.++ ++|. ....+|+.|..+.
T Consensus 113 ~ll~--~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~~~g~ 155 (287)
T PRK08223 113 AFLD--GVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAAPLGM 155 (287)
T ss_pred HHHh--CCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEeccCC
Confidence 7888 99999987643222445544 4555 5567887765443
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.37 Score=40.63 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=27.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..++..|++.|++|++++++++..
T Consensus 10 G~G~mG~~ia~~la~~g~~V~~~d~~~~~~ 39 (282)
T PRK05808 10 GAGTMGNGIAQVCAVAGYDVVMVDISDAAV 39 (282)
T ss_pred ccCHHHHHHHHHHHHCCCceEEEeCCHHHH
Confidence 579999999999999999999999887764
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.51 Score=41.01 Aligned_cols=98 Identities=13% Similarity=0.121 Sum_probs=51.1
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhc--cCC-e-EEEEecCCChHHHHHhhhcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF--SSK-I-LHLKGDRKDYDFVKSSLSAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~-v-~~~~~D~~~~~~~~~~~~~~~~d~ 75 (295)
+|++|++|+.+++.|.+++ .+|..+.++............. ...+ ..+ . +...-++ +++ .+. ++|+
T Consensus 6 vGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~----~~~--~~Dv 76 (341)
T TIGR00978 6 LGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVK--WIEPGDMPEYVRDLPIVEP-EPV----ASK--DVDI 76 (341)
T ss_pred ECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhcc--ccccCCCccccceeEEEeC-CHH----Hhc--cCCE
Confidence 5999999999999998876 6888885444332221110000 0000 000 1 1111111 222 335 8999
Q ss_pred EEEcccCChhcHHHHHHhC-CCCCcEEEeeccccc
Q 022578 76 VYDINGREADEVEPILDAL-PNLEQFIYCSSAGVY 109 (295)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v~ 109 (295)
||.+.+.+ ....+.+.+ +...++|-.|+..-+
T Consensus 77 Vf~a~p~~--~s~~~~~~~~~~G~~VIDlsg~fR~ 109 (341)
T TIGR00978 77 VFSALPSE--VAEEVEPKLAEAGKPVFSNASNHRM 109 (341)
T ss_pred EEEeCCHH--HHHHHHHHHHHCCCEEEECChhhcc
Confidence 99998654 233333444 333467777766543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.87 Score=39.67 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=56.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCC---Ch-HHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK---DY-DFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~---~~-~~~~~~~~~~~~d~v 76 (295)
+|++|-+|..+++.+...|.+|+++++++++..... .+ .+++.+. |.. +. +.+..... .++|+|
T Consensus 165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~--------~~--lGa~~vi-~~~~~~~~~~~i~~~~~-~gvD~v 232 (348)
T PLN03154 165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK--------NK--LGFDEAF-NYKEEPDLDAALKRYFP-EGIDIY 232 (348)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------Hh--cCCCEEE-ECCCcccHHHHHHHHCC-CCcEEE
Confidence 488999999999888888999999887765522100 01 1232222 222 11 22333222 379999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|++.|. ......++.++...+++.++.
T Consensus 233 ~d~vG~--~~~~~~~~~l~~~G~iv~~G~ 259 (348)
T PLN03154 233 FDNVGG--DMLDAALLNMKIHGRIAVCGM 259 (348)
T ss_pred EECCCH--HHHHHHHHHhccCCEEEEECc
Confidence 999884 356667777775567886653
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.24 Score=42.19 Aligned_cols=29 Identities=21% Similarity=0.350 Sum_probs=26.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..+++.|++.|++|++.+|++++
T Consensus 7 GlG~mG~~mA~~L~~~g~~v~v~dr~~~~ 35 (299)
T PRK12490 7 GLGKMGGNMAERLREDGHEVVGYDVNQEA 35 (299)
T ss_pred cccHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 47899999999999999999999998765
|
|
| >PRK00257 erythronate-4-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.27 Score=43.22 Aligned_cols=81 Identities=20% Similarity=0.188 Sum_probs=53.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.++...... ... ...+++++++ ++|+|+.+...
T Consensus 123 G~G~IG~~va~~l~a~G~~V~~~Dp~~~~~~---------------~~~--------~~~~l~ell~--~aDiV~lh~Pl 177 (381)
T PRK00257 123 GAGHVGGRLVRVLRGLGWKVLVCDPPRQEAE---------------GDG--------DFVSLERILE--ECDVISLHTPL 177 (381)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCcccccc---------------cCc--------cccCHHHHHh--hCCEEEEeCcC
Confidence 6799999999999999999999876432200 111 1124677888 89999877665
Q ss_pred Chh---cHHHH-----HHhCCCCCcEEEeecccc
Q 022578 83 EAD---EVEPI-----LDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~---~~~~l-----l~~~~~~~~~i~~Ss~~v 108 (295)
+.+ .|..+ +..++....+|.+|-..+
T Consensus 178 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v 211 (381)
T PRK00257 178 TKEGEHPTRHLLDEAFLASLRPGAWLINASRGAV 211 (381)
T ss_pred CCCccccccccCCHHHHhcCCCCeEEEECCCCcc
Confidence 443 34444 444555567887776555
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=92.54 E-value=1.2 Score=39.47 Aligned_cols=104 Identities=12% Similarity=0.063 Sum_probs=64.1
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCCC---CC--------CchhhhhccCCeEE--EEecCCChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP---GE--------SDQEFAEFSSKILH--LKGDRKDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~---~~--------~~~~~~~~~~~v~~--~~~D~~~~~~~~ 65 (295)
|.|-+|+.++..|...|. ++++++.+.-.. ..++. .. ....+.+..+.+++ +..+++ .+...
T Consensus 49 G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~-~~~~~ 127 (392)
T PRK07878 49 GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD-PSNAV 127 (392)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC-hhHHH
Confidence 578999999999999986 677777664331 11110 00 01123344455544 444554 44567
Q ss_pred HhhhcCCCcEEEEcccCChhcHHHHH-HhCC-CCCcEEEeeccccccC
Q 022578 66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYLK 111 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll-~~~~-~~~~~i~~Ss~~v~~~ 111 (295)
++++ ++|+||.+... . .++.++ ++|. ....||+.+..+.+|.
T Consensus 128 ~~~~--~~D~Vvd~~d~-~-~~r~~ln~~~~~~~~p~v~~~~~g~~G~ 171 (392)
T PRK07878 128 ELFS--QYDLILDGTDN-F-ATRYLVNDAAVLAGKPYVWGSIYRFEGQ 171 (392)
T ss_pred HHHh--cCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence 7888 99999998653 3 344444 4555 5567888877776663
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.3 Score=41.70 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=47.7
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
.||||++|..+++.|.++. .++..+..+..+ ++.+ ....+. ++|+||.+
T Consensus 8 vGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~-------------------------~~~~---~~~~~~--~~DvvFla 57 (313)
T PRK11863 8 DGEAGTTGLQIRERLAGRSDIELLSIPEAKRK-------------------------DAAA---RRELLN--AADVAILC 57 (313)
T ss_pred ECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC-------------------------cccC---chhhhc--CCCEEEEC
Confidence 4999999999999999885 355555433222 1111 123455 89999988
Q ss_pred ccCChhcHHHHHHhCC-CCCcEEEeecccc
Q 022578 80 NGREADEVEPILDALP-NLEQFIYCSSAGV 108 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v 108 (295)
... .....++..+. ...++|=+|+..-
T Consensus 58 lp~--~~s~~~~~~~~~~g~~VIDlSadfR 85 (313)
T PRK11863 58 LPD--DAAREAVALIDNPATRVIDASTAHR 85 (313)
T ss_pred CCH--HHHHHHHHHHHhCCCEEEECChhhh
Confidence 743 34444555443 4457888887654
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.47 E-value=0.48 Score=40.77 Aligned_cols=84 Identities=17% Similarity=0.103 Sum_probs=55.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.++..+..... ..- ....+++++++. ..|+|+.....
T Consensus 149 G~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~---------------~~~----~~~~~~Ld~lL~--~sDiv~lh~Pl 207 (324)
T COG0111 149 GLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAG---------------VDG----VVGVDSLDELLA--EADILTLHLPL 207 (324)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEECCCCchhhhc---------------ccc----ceecccHHHHHh--hCCEEEEcCCC
Confidence 579999999999999999999999954441111 000 112356788888 89999877765
Q ss_pred ChhcHHHHHHh-----CCCCCcEEEeecccc
Q 022578 83 EADEVEPILDA-----LPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~~ll~~-----~~~~~~~i~~Ss~~v 108 (295)
+. .|+.++.+ |+....||++|=..+
T Consensus 208 T~-eT~g~i~~~~~a~MK~gailIN~aRG~v 237 (324)
T COG0111 208 TP-ETRGLINAEELAKMKPGAILINAARGGV 237 (324)
T ss_pred Cc-chhcccCHHHHhhCCCCeEEEECCCcce
Confidence 43 35555544 443337777665443
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.33 Score=44.00 Aligned_cols=30 Identities=20% Similarity=0.380 Sum_probs=27.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|+++|++|++.+|++++.
T Consensus 6 GLG~MG~~mA~nL~~~G~~V~v~drt~~~~ 35 (467)
T TIGR00873 6 GLAVMGSNLALNMADHGFTVSVYNRTPEKT 35 (467)
T ss_pred eeHHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 578999999999999999999999998774
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.06 Score=37.11 Aligned_cols=72 Identities=19% Similarity=0.223 Sum_probs=45.9
Q ss_pred cCCcchHHHHHHHHHCC---CeEEEE-ecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKEG---HQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+|.+|..|++.|++.| ++|+.. +|++++..+.. .. -++..+.. +..++++ ..|+||-
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~---------~~-~~~~~~~~------~~~~~~~--~advvil 67 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELA---------KE-YGVQATAD------DNEEAAQ--EADVVIL 67 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHH---------HH-CTTEEESE------EHHHHHH--HTSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHH---------Hh-hccccccC------ChHHhhc--cCCEEEE
Confidence 68999999999999999 999965 88887732211 11 12323321 2345666 8999999
Q ss_pred cccCChhcHHHHHHhC
Q 022578 79 INGREADEVEPILDAL 94 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~ 94 (295)
+.- +.....+++.+
T Consensus 68 av~--p~~~~~v~~~i 81 (96)
T PF03807_consen 68 AVK--PQQLPEVLSEI 81 (96)
T ss_dssp -S---GGGHHHHHHHH
T ss_pred EEC--HHHHHHHHHHH
Confidence 865 34555555554
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.74 Score=39.44 Aligned_cols=91 Identities=15% Similarity=0.199 Sum_probs=57.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCe-EEEEecCCCh---HHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDY---DFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~---~~~~~~~~~~~~d~v 76 (295)
+|++|.+|..+++.+.+.|.+|+++++++.+.... .+. -++ .++. ..+. +.+..... .++|++
T Consensus 152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~---------~~~-~g~~~~~~--~~~~~~~~~v~~~~~-~~~d~v 218 (329)
T cd05288 152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL---------VEE-LGFDAAIN--YKTPDLAEALKEAAP-DGIDVY 218 (329)
T ss_pred ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------Hhh-cCCceEEe--cCChhHHHHHHHhcc-CCceEE
Confidence 47899999999999999999999998876552110 110 112 2222 2222 22333332 479999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+++.+. ......++.++...++|.+++.
T Consensus 219 i~~~g~--~~~~~~~~~l~~~G~~v~~g~~ 246 (329)
T cd05288 219 FDNVGG--EILDAALTLLNKGGRIALCGAI 246 (329)
T ss_pred EEcchH--HHHHHHHHhcCCCceEEEEeec
Confidence 999874 4566667777755678877654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.52 Score=40.11 Aligned_cols=30 Identities=27% Similarity=0.493 Sum_probs=27.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|++.|++|++.+|++++.
T Consensus 8 GlG~mG~~mA~~l~~~G~~V~v~d~~~~~~ 37 (296)
T PRK15461 8 GLGQMGSPMASNLLKQGHQLQVFDVNPQAV 37 (296)
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 579999999999999999999999987763
|
|
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.5 Score=41.51 Aligned_cols=81 Identities=16% Similarity=0.103 Sum_probs=50.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|.+.++.... .+. .....+++++++ ++|+|+.....
T Consensus 123 G~G~IG~~vA~~l~a~G~~V~~~dp~~~~-----------------~~~------~~~~~~L~ell~--~sDiI~lh~PL 177 (378)
T PRK15438 123 GVGNVGRRLQARLEALGIKTLLCDPPRAD-----------------RGD------EGDFRSLDELVQ--EADILTFHTPL 177 (378)
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCcccc-----------------ccc------ccccCCHHHHHh--hCCEEEEeCCC
Confidence 67999999999999999999998753221 000 001235677887 88988866554
Q ss_pred Chh---cHHH-----HHHhCCCCCcEEEeecccc
Q 022578 83 EAD---EVEP-----ILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~---~~~~-----ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. .|.. .+..++...-+|.+|=..+
T Consensus 178 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v 211 (378)
T PRK15438 178 FKDGPYKTLHLADEKLIRSLKPGAILINACRGAV 211 (378)
T ss_pred CCCcccccccccCHHHHhcCCCCcEEEECCCchh
Confidence 433 2333 3444554456666664443
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.59 Score=40.01 Aligned_cols=28 Identities=29% Similarity=0.482 Sum_probs=25.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~ 30 (295)
|+|.+|+.+++.|.+.||+|++.+|++.
T Consensus 11 G~G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 11 GAGAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5899999999999999999999998753
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.94 Score=38.63 Aligned_cols=93 Identities=13% Similarity=0.094 Sum_probs=58.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeE-EEEecC-CChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDR-KDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~-~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|.+|..+++.+...|.+|++++++..+.... .+ -+++ ++..+- ...+.+.+.....++|.|++
T Consensus 145 ~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~ 213 (323)
T cd05282 145 NAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL---------KA--LGADEVIDSSPEDLAQRVKEATGGAGARLALD 213 (323)
T ss_pred cccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH---------Hh--cCCCEEecccchhHHHHHHHHhcCCCceEEEE
Confidence 47889999999999999999999988877552111 11 1221 222111 11233444444347999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+.+.. .....++.+....+|+.++..
T Consensus 214 ~~g~~--~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 214 AVGGE--SATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred CCCCH--HHHHHHHhhCCCCEEEEEccC
Confidence 98743 345667777755688877654
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=92.32 E-value=1.7 Score=36.32 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=62.2
Q ss_pred cCCcchHHHHHHHHHCC-CeEEEEecCCCcc---ccCCC---C--------CCchhhhhccCCeEEEEe-cCCChHHHHH
Q 022578 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPI---AQQLP---G--------ESDQEFAEFSSKILHLKG-DRKDYDFVKS 66 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~---~~~~~---~--------~~~~~~~~~~~~v~~~~~-D~~~~~~~~~ 66 (295)
|.|.+|+++++.|...| -++++++.+.-.. ..++. . .....+.+..+.+++... +..+++.+..
T Consensus 37 G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i~~e~~~~ 116 (268)
T PRK15116 37 GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFITPDNVAE 116 (268)
T ss_pred CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecccChhhHHH
Confidence 57899999999999999 5888888775431 11110 0 011223444455544333 2335566666
Q ss_pred hhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeeccc
Q 022578 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG 107 (295)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~ 107 (295)
++. .++|+||.+... ...-..|.+.|. ....+|.+...+
T Consensus 117 ll~-~~~D~VIdaiD~-~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 117 YMS-AGFSYVIDAIDS-VRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred Hhc-CCCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEECCcc
Confidence 663 279999999764 334455777777 445677554443
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.97 Score=37.33 Aligned_cols=84 Identities=18% Similarity=0.103 Sum_probs=58.7
Q ss_pred chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC-Chh
Q 022578 7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR-EAD 85 (295)
Q Consensus 7 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~-~~~ 85 (295)
=|+.|+..|.+.|+ |++-.-..-... .+ ........++.+-+.+.+.+...+++.+++.||+..=+ ...
T Consensus 11 E~r~la~~L~~~g~-v~~sv~t~~g~~-~~--------~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA~~ 80 (249)
T PF02571_consen 11 EGRKLAERLAEAGY-VIVSVATSYGGE-LL--------KPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFAAE 80 (249)
T ss_pred HHHHHHHHHHhcCC-EEEEEEhhhhHh-hh--------ccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchHHH
Confidence 37899999999998 554332222211 11 00114678888988899999999999999999998643 455
Q ss_pred cHHHHHHhCC--CCCcE
Q 022578 86 EVEPILDALP--NLEQF 100 (295)
Q Consensus 86 ~~~~ll~~~~--~~~~~ 100 (295)
-++|+.++|+ ++..+
T Consensus 81 is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 81 ISQNAIEACRELGIPYL 97 (249)
T ss_pred HHHHHHHHHhhcCcceE
Confidence 6888888888 65433
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.65 Score=39.77 Aligned_cols=71 Identities=21% Similarity=0.188 Sum_probs=43.3
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|.||+.++..|...+. ++.++++.+.. ...+ .+........+.... +.+++.+.++ +.|+||-
T Consensus 5 iGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-g~a~------DL~~~~~~~~i~~~~--~~~~~~~~~~--daDivvi 73 (312)
T TIGR01772 5 LGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-GVAA------DLSHIPTAASVKGFS--GEEGLENALK--GADVVVI 73 (312)
T ss_pred ECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-EEEc------hhhcCCcCceEEEec--CCCchHHHcC--CCCEEEE
Confidence 58889999999999988874 78888887622 1111 011111112222111 1122445777 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 74 taG~ 77 (312)
T TIGR01772 74 PAGV 77 (312)
T ss_pred eCCC
Confidence 9987
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.67 Score=39.63 Aligned_cols=71 Identities=21% Similarity=0.160 Sum_probs=43.2
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|.+|++++..|...+ .++.+++.. ...... ..+........+... ...+++.+.++ ++|+||-
T Consensus 6 IGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~a-----lDL~~~~~~~~i~~~--~~~~~~y~~~~--daDivvi 74 (310)
T cd01337 6 LGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVA-----ADLSHINTPAKVTGY--LGPEELKKALK--GADVVVI 74 (310)
T ss_pred ECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceee-----hHhHhCCCcceEEEe--cCCCchHHhcC--CCCEEEE
Confidence 5888999999999998887 478888887 211111 111111111222211 01122446677 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
+||.
T Consensus 75 taG~ 78 (310)
T cd01337 75 PAGV 78 (310)
T ss_pred eCCC
Confidence 9987
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.23 Score=42.92 Aligned_cols=90 Identities=16% Similarity=0.080 Sum_probs=50.9
Q ss_pred CCcCCcchHHHHHHHHHCC---CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.||||++|..+++.|.++. .++..+....+. ...+. ..+.+...-++ +. ..+. ++|+||
T Consensus 10 vGATG~vG~ellrlL~~~~hP~~~l~~laS~~sa-G~~~~----------~~~~~~~v~~~---~~--~~~~--~~Dvvf 71 (336)
T PRK08040 10 LGATGAVGEALLELLAERQFPVGELYALASEESA-GETLR----------FGGKSVTVQDA---AE--FDWS--QAQLAF 71 (336)
T ss_pred EccCCHHHHHHHHHHhcCCCCceEEEEEEccCcC-CceEE----------ECCcceEEEeC---ch--hhcc--CCCEEE
Confidence 4999999999999999853 366666544332 11111 01111111122 11 2235 899999
Q ss_pred EcccCChhcHHHHHHhC-CCCCcEEEeecccccc
Q 022578 78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVYL 110 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v~~ 110 (295)
.+++.. ....++..+ +...++|=.|+..-+.
T Consensus 72 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fRl~ 103 (336)
T PRK08040 72 FVAGRE--ASAAYAEEATNAGCLVIDSSGLFALE 103 (336)
T ss_pred ECCCHH--HHHHHHHHHHHCCCEEEECChHhcCC
Confidence 987533 444555544 3444788777766543
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.58 Score=40.09 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=53.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-||+.+++.+..-|-+|++.+|...... ..+. ..+++++++ .+|+|+.+...
T Consensus 152 G~G~IG~~vA~~~~~fgm~V~~~d~~~~~~~---------------~~~~--------~~~l~ell~--~sDvv~lh~Pl 206 (311)
T PRK08410 152 GLGTIGKRVAKIAQAFGAKVVYYSTSGKNKN---------------EEYE--------RVSLEELLK--TSDIISIHAPL 206 (311)
T ss_pred CCCHHHHHHHHHHhhcCCEEEEECCCccccc---------------cCce--------eecHHHHhh--cCCEEEEeCCC
Confidence 5799999999999888999999988533200 1111 235778888 89999877654
Q ss_pred ChhcHHH-----HHHhCCCCCcEEEeecccc
Q 022578 83 EADEVEP-----ILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~~-----ll~~~~~~~~~i~~Ss~~v 108 (295)
+. .|++ .++.++....||.+|-..+
T Consensus 207 t~-~T~~li~~~~~~~Mk~~a~lIN~aRG~v 236 (311)
T PRK08410 207 NE-KTKNLIAYKELKLLKDGAILINVGRGGI 236 (311)
T ss_pred Cc-hhhcccCHHHHHhCCCCeEEEECCCccc
Confidence 33 3444 3444555557777775444
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.13 Score=44.10 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=26.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..++..|++.|++|++++++++.
T Consensus 11 GaG~mG~~iA~~l~~~g~~V~~~d~~~~~ 39 (311)
T PRK06130 11 GAGTMGSGIAALFARKGLQVVLIDVMEGA 39 (311)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 57999999999999999999999988766
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.14 E-value=0.3 Score=43.00 Aligned_cols=85 Identities=13% Similarity=0.042 Sum_probs=54.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.+|..... .... ..++. -.+++++++. .+|+|+.+...
T Consensus 206 G~G~IG~~vA~~L~afG~~V~~~d~~~~~~-~~~~----------~~g~~-------~~~~l~ell~--~sDvV~l~lPl 265 (386)
T PLN03139 206 GAGRIGRLLLQRLKPFNCNLLYHDRLKMDP-ELEK----------ETGAK-------FEEDLDAMLP--KCDVVVINTPL 265 (386)
T ss_pred eecHHHHHHHHHHHHCCCEEEEECCCCcch-hhHh----------hcCce-------ecCCHHHHHh--hCCEEEEeCCC
Confidence 579999999999999999999988765331 1000 01221 1235778888 89999987654
Q ss_pred ChhcHHHHH-----HhCCCCCcEEEeecccc
Q 022578 83 EADEVEPIL-----DALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~~ll-----~~~~~~~~~i~~Ss~~v 108 (295)
+ ..+++++ ..++....||.++-..+
T Consensus 266 t-~~T~~li~~~~l~~mk~ga~lIN~aRG~i 295 (386)
T PLN03139 266 T-EKTRGMFNKERIAKMKKGVLIVNNARGAI 295 (386)
T ss_pred C-HHHHHHhCHHHHhhCCCCeEEEECCCCch
Confidence 3 3454444 44555557777775444
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.79 Score=34.75 Aligned_cols=66 Identities=20% Similarity=0.259 Sum_probs=45.4
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-------hHHHHHhhhcCCCc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-------YDFVKSSLSAKGFD 74 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-------~~~~~~~~~~~~~d 74 (295)
||-|-+|+.+++.+.+++|-|..++-...... +.-.++.+|-+- .+.+.+.+...++|
T Consensus 10 GGkGALGSacv~~FkannywV~siDl~eNe~A---------------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD 74 (236)
T KOG4022|consen 10 GGKGALGSACVEFFKANNYWVLSIDLSENEQA---------------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD 74 (236)
T ss_pred cCcchHhHHHHHHHHhcCeEEEEEeecccccc---------------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence 88999999999999999999888776655511 111233333221 23445566667999
Q ss_pred EEEEcccC
Q 022578 75 VVYDINGR 82 (295)
Q Consensus 75 ~vi~~a~~ 82 (295)
.||+-||-
T Consensus 75 av~CVAGG 82 (236)
T KOG4022|consen 75 AVFCVAGG 82 (236)
T ss_pred eEEEeecc
Confidence 99998775
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=92.07 E-value=0.062 Score=41.02 Aligned_cols=85 Identities=21% Similarity=0.285 Sum_probs=49.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|+|..|.+++..|.++|++|++.+|+++......... ....+.+++..-. .+.-..++.++++ +.|+||-+.
T Consensus 6 GaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~---~n~~~~~~~~l~~-~i~~t~dl~~a~~--~ad~Iiiav-- 77 (157)
T PF01210_consen 6 GAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETR---QNPKYLPGIKLPE-NIKATTDLEEALE--DADIIIIAV-- 77 (157)
T ss_dssp SSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHT---SETTTSTTSBEET-TEEEESSHHHHHT--T-SEEEE-S--
T ss_pred CcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhC---CCCCCCCCcccCc-ccccccCHHHHhC--cccEEEecc--
Confidence 5899999999999999999999999875421100000 0000011111110 1111134567888 999999775
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
.....+.+++.++
T Consensus 78 Ps~~~~~~~~~l~ 90 (157)
T PF01210_consen 78 PSQAHREVLEQLA 90 (157)
T ss_dssp -GGGHHHHHHHHT
T ss_pred cHHHHHHHHHHHh
Confidence 4557778888776
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.55 Score=41.28 Aligned_cols=103 Identities=15% Similarity=0.166 Sum_probs=62.9
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCCC---C--------CCchhhhhccCCeE--EEEecCCChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP---G--------ESDQEFAEFSSKIL--HLKGDRKDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~---~--------~~~~~~~~~~~~v~--~~~~D~~~~~~~~ 65 (295)
|.|-+|..++..|...|. ++++++.+.-.. ..+.. . .....+.+..+.++ .+...+ +.+.+.
T Consensus 48 G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~ 126 (370)
T PRK05600 48 GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERL-TAENAV 126 (370)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeec-CHHHHH
Confidence 578999999999999995 888888875331 11110 0 00112234445544 444444 355677
Q ss_pred HhhhcCCCcEEEEcccCChhcHHHHHHh-CC-CCCcEEEeecccccc
Q 022578 66 SSLSAKGFDVVYDINGREADEVEPILDA-LP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~-~~-~~~~~i~~Ss~~v~~ 110 (295)
++++ ++|+||.|... . .++.++.. |. ....+|+.+..+-+|
T Consensus 127 ~~~~--~~DlVid~~Dn-~-~~r~~in~~~~~~~iP~v~~~~~g~~G 169 (370)
T PRK05600 127 ELLN--GVDLVLDGSDS-F-ATKFLVADAAEITGTPLVWGTVLRFHG 169 (370)
T ss_pred HHHh--CCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence 7888 99999998753 2 34554444 44 445778776655444
|
|
| >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.53 Score=43.20 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=27.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|+.|+..|++.|++|++.+|+++..
T Consensus 12 GaG~MG~gIA~~la~aG~~V~l~d~~~e~l 41 (503)
T TIGR02279 12 GAGAMGAGIAQVAASAGHQVLLYDIRAEAL 41 (503)
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 469999999999999999999999998774
|
This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families. |
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.01 E-value=0.42 Score=43.38 Aligned_cols=30 Identities=17% Similarity=0.367 Sum_probs=27.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|+++||+|++.+|+++..
T Consensus 8 GLG~MG~~lA~nL~~~G~~V~v~dr~~~~~ 37 (470)
T PTZ00142 8 GLAVMGQNLALNIASRGFKISVYNRTYEKT 37 (470)
T ss_pred eEhHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 578999999999999999999999998873
|
|
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.19 Score=42.03 Aligned_cols=30 Identities=30% Similarity=0.439 Sum_probs=27.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|..|..++..|++.||+|++.+|..++.
T Consensus 42 GLG~MG~~M~~nLik~G~kVtV~dr~~~k~ 71 (327)
T KOG0409|consen 42 GLGNMGSAMVSNLIKAGYKVTVYDRTKDKC 71 (327)
T ss_pred eeccchHHHHHHHHHcCCEEEEEeCcHHHH
Confidence 578899999999999999999999998884
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.34 Score=40.78 Aligned_cols=48 Identities=15% Similarity=0.290 Sum_probs=36.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|++|.+|+.++..|+++|..|++..|... .+.+.++ +.|+||++.
T Consensus 165 iG~gg~vGkpia~~L~~~gatVtv~~~~t~--------------------------------~L~~~~~--~aDIvI~At 210 (283)
T PRK14192 165 VGRSAILGKPMAMMLLNANATVTICHSRTQ--------------------------------NLPELVK--QADIIVGAV 210 (283)
T ss_pred ECCcHHHHHHHHHHHHhCCCEEEEEeCCch--------------------------------hHHHHhc--cCCEEEEcc
Confidence 477888999999999998888888776211 2444556 899999998
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
|.
T Consensus 211 G~ 212 (283)
T PRK14192 211 GK 212 (283)
T ss_pred CC
Confidence 64
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.44 Score=41.06 Aligned_cols=72 Identities=15% Similarity=0.138 Sum_probs=41.6
Q ss_pred CCcCCcchHHHHHHHHHCCC-------eEEEEecCCCc--cccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 71 (295)
+|++|.+|+.++..|...+. ++.+++..+.. .........+... ....++.+. . .+ .+.++
T Consensus 10 iGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~-~~~~~~~i~-~--~~----y~~~~-- 79 (326)
T PRK05442 10 TGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAF-PLLAGVVIT-D--DP----NVAFK-- 79 (326)
T ss_pred ECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhh-hhcCCcEEe-c--Ch----HHHhC--
Confidence 58889999999999987653 78888886532 1111111001000 111233222 1 12 24556
Q ss_pred CCcEEEEcccC
Q 022578 72 GFDVVYDINGR 82 (295)
Q Consensus 72 ~~d~vi~~a~~ 82 (295)
+.|+||-+||.
T Consensus 80 daDiVVitaG~ 90 (326)
T PRK05442 80 DADVALLVGAR 90 (326)
T ss_pred CCCEEEEeCCC
Confidence 99999999986
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.35 Score=41.91 Aligned_cols=89 Identities=17% Similarity=0.181 Sum_probs=51.6
Q ss_pred CCcCCcchHHHHHHHHH-CCCe---EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVK-EGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
+||||++|+.+++.|.+ ..++ +..+....+. ...+. ..+.+...-++ +++. +. ++|+|
T Consensus 11 vGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~sa-Gk~~~----------~~~~~l~v~~~-~~~~----~~--~~Div 72 (347)
T PRK06728 11 VGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSA-GKTVQ----------FKGREIIIQEA-KINS----FE--GVDIA 72 (347)
T ss_pred EeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccC-CCCee----------eCCcceEEEeC-CHHH----hc--CCCEE
Confidence 49999999999999996 4666 5555544332 11111 01112222233 3332 35 89999
Q ss_pred EEcccCChhcHHHHHHhCC-CCCcEEEeeccccc
Q 022578 77 YDINGREADEVEPILDALP-NLEQFIYCSSAGVY 109 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~ 109 (295)
|.+++.. ..+.++..+. ....+|=.|+..-+
T Consensus 73 f~a~~~~--~s~~~~~~~~~~G~~VID~Ss~fR~ 104 (347)
T PRK06728 73 FFSAGGE--VSRQFVNQAVSSGAIVIDNTSEYRM 104 (347)
T ss_pred EECCChH--HHHHHHHHHHHCCCEEEECchhhcC
Confidence 9988543 4555555543 44577777766544
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.38 Score=41.36 Aligned_cols=29 Identities=34% Similarity=0.572 Sum_probs=26.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..++..|.+.|++|++++|++..
T Consensus 8 G~G~mG~~~a~~L~~~g~~V~~~~r~~~~ 36 (325)
T PRK00094 8 GAGSWGTALAIVLARNGHDVTLWARDPEQ 36 (325)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 47999999999999999999999998655
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.72 Score=40.23 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=43.1
Q ss_pred CCcCCcchHHHHHHHH-HCCCe---EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLV-KEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~-~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
.||||.+|+.+++.|. +++++ ++.++...+...... ..+.....-++.+. ..+. ++|++
T Consensus 6 vGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~-----------f~~~~~~v~~~~~~----~~~~--~vDiv 68 (366)
T TIGR01745 6 VGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPS-----------FGGTTGTLQDAFDI----DALK--ALDII 68 (366)
T ss_pred EcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCC-----------CCCCcceEEcCccc----cccc--CCCEE
Confidence 4999999999999999 55554 444443322211110 01222222233322 2345 89999
Q ss_pred EEcccCChhcHHHHHHhCC
Q 022578 77 YDINGREADEVEPILDALP 95 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~ 95 (295)
|.+++.. ..+.+...+.
T Consensus 69 ffa~g~~--~s~~~~p~~~ 85 (366)
T TIGR01745 69 ITCQGGD--YTNEIYPKLR 85 (366)
T ss_pred EEcCCHH--HHHHHHHHHH
Confidence 9998754 5555555544
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.64 Score=39.47 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=27.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..++..|+..|++|++.+++++..
T Consensus 11 G~G~mG~~iA~~l~~~G~~V~~~d~~~~~~ 40 (295)
T PLN02545 11 GAGQMGSGIAQLAAAAGMDVWLLDSDPAAL 40 (295)
T ss_pred CCCHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 579999999999999999999999987663
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=91.49 E-value=1 Score=38.92 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=55.3
Q ss_pred CCcchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhhcCCCcEEEEcc
Q 022578 4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~~a 80 (295)
+|.+|..+++.+...|.+ |+++++++++.... .+ -+++.+ .|..+ .+.+.+.....++|+||++.
T Consensus 172 ~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~---------~~--~ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid~~ 239 (339)
T cd08239 172 AGPVGLGALMLARALGAEDVIGVDPSPERLELA---------KA--LGADFV-INSGQDDVQEIRELTSGAGADVAIECS 239 (339)
T ss_pred CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH---------HH--hCCCEE-EcCCcchHHHHHHHhCCCCCCEEEECC
Confidence 489999999998888988 99988776652111 11 122222 22222 33444444434799999998
Q ss_pred cCChhcHHHHHHhCCCCCcEEEeec
Q 022578 81 GREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+.. ......++.++...+++.++.
T Consensus 240 g~~-~~~~~~~~~l~~~G~~v~~g~ 263 (339)
T cd08239 240 GNT-AARRLALEAVRPWGRLVLVGE 263 (339)
T ss_pred CCH-HHHHHHHHHhhcCCEEEEEcC
Confidence 753 233455677775558887764
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.74 Score=42.15 Aligned_cols=93 Identities=11% Similarity=0.031 Sum_probs=60.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--------------h--HHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--------------Y--DFVKS 66 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--------------~--~~~~~ 66 (295)
|.|-+|...+..+...|.+|++++++++..... .+ -+.+++..|..+ . +...+
T Consensus 172 GaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a---------es--lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 172 GAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV---------ES--MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HH--cCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 579999999999999999999999988773211 11 244444333321 1 11122
Q ss_pred hhhc--CCCcEEEEcccCC----hhc-HHHHHHhCCCCCcEEEeecc
Q 022578 67 SLSA--KGFDVVYDINGRE----ADE-VEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 67 ~~~~--~~~d~vi~~a~~~----~~~-~~~ll~~~~~~~~~i~~Ss~ 106 (295)
.+.+ .++|+||.+++.. +.. ++..++.++....+|.++..
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 3222 2799999999873 223 57788888866688888753
|
|
| >PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.096 Score=37.70 Aligned_cols=87 Identities=16% Similarity=0.109 Sum_probs=45.5
Q ss_pred cCCcchHHHHHHHHHC----CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|.|.||+.+++.|.+. +.+|.++..+........ .....+..+. .+ +.++++..++|+||.
T Consensus 1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~~~~~~~~--------~~~~~~~~~~----~~---~~~~~~~~~~dvvVE 65 (117)
T PF03447_consen 1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRSMLISKDW--------AASFPDEAFT----TD---LEELIDDPDIDVVVE 65 (117)
T ss_dssp --SHHHHHHHHHHHHTHHHCEEEEEEEEESSEEEETTH--------HHHHTHSCEE----SS---HHHHHTHTT-SEEEE
T ss_pred CCCHHHHHHHHHHHhCcccCCEEEEEEEECCchhhhhh--------hhhccccccc----CC---HHHHhcCcCCCEEEE
Confidence 5799999999999886 567777665542111100 0001111111 13 334444447999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|++. ......+.++++...++|-.|-
T Consensus 66 ~t~~-~~~~~~~~~~L~~G~~VVt~nk 91 (117)
T PF03447_consen 66 CTSS-EAVAEYYEKALERGKHVVTANK 91 (117)
T ss_dssp -SSC-HHHHHHHHHHHHTTCEEEES-H
T ss_pred CCCc-hHHHHHHHHHHHCCCeEEEECH
Confidence 9654 2333445555566668886654
|
Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D .... |
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.36 E-value=0.27 Score=42.62 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=55.5
Q ss_pred cCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH-HHHHhhhcCCCcEEEEcc
Q 022578 3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 3 atG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~d~vi~~a 80 (295)
|+||+.+.++..|.++ ..+|++.+|......+... ..+++.+..|+.+.+ .+++..+ ..|.++.+.
T Consensus 9 gsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~----------~~~~~av~ldv~~~~~~L~~~v~--~~D~viSLl 76 (445)
T KOG0172|consen 9 GSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVK----------GINIKAVSLDVADEELALRKEVK--PLDLVISLL 76 (445)
T ss_pred cCccccchHHHHHhhcCCceEEEehhhHHHHHHHhc----------CCCccceEEEccchHHHHHhhhc--ccceeeeec
Confidence 6899999999999987 4799999988777443332 245889999999988 8888888 999999886
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
..
T Consensus 77 P~ 78 (445)
T KOG0172|consen 77 PY 78 (445)
T ss_pred cc
Confidence 54
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.36 Score=41.45 Aligned_cols=70 Identities=23% Similarity=0.273 Sum_probs=43.0
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|+ |.+|+.++..|+..|. ++.+++++.+..........+ ......++.+... +. +.++ ++|+||.
T Consensus 12 iGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~--~~~~~~~~~i~~~---~~----~~~~--~adivIi 79 (315)
T PRK00066 12 VGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSH--AVPFTSPTKIYAG---DY----SDCK--DADLVVI 79 (315)
T ss_pred ECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHh--hccccCCeEEEeC---CH----HHhC--CCCEEEE
Confidence 465 9999999999999886 899999876653211110000 0011123333321 22 3466 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 80 tag~ 83 (315)
T PRK00066 80 TAGA 83 (315)
T ss_pred ecCC
Confidence 9987
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=91.26 E-value=0.49 Score=36.54 Aligned_cols=48 Identities=23% Similarity=0.324 Sum_probs=35.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|+++.+|..+++.|.++|.+|++..|.. +.+.+.+. +.|+||.+.
T Consensus 50 iG~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------------~~l~~~l~--~aDiVIsat 95 (168)
T cd01080 50 VGRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------------KNLKEHTK--QADIVIVAV 95 (168)
T ss_pred ECCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------------hhHHHHHh--hCCEEEEcC
Confidence 36655678888888888888888777642 23556777 899999987
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
+.
T Consensus 96 ~~ 97 (168)
T cd01080 96 GK 97 (168)
T ss_pred CC
Confidence 75
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.15 E-value=0.67 Score=39.73 Aligned_cols=94 Identities=16% Similarity=0.159 Sum_probs=51.2
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeE-EEEecC--CChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDR--KDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~--~~~~~~~~~~~~~~~d~v 76 (295)
.||+|+.|..|++.|..+. .+++..+.+... ...+ .+..++.. .+...+ .|++.+ ..+ ++|+|
T Consensus 8 vGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~-g~~~--------~~~~p~l~g~~~l~~~~~~~~~~--~~~--~~Dvv 74 (349)
T COG0002 8 VGASGYTGLELLRLLAGHPDVELILISSRERA-GKPV--------SDVHPNLRGLVDLPFQTIDPEKI--ELD--ECDVV 74 (349)
T ss_pred EcCCCCcHHHHHHHHhcCCCeEEEEeechhhc-CCch--------HHhCcccccccccccccCChhhh--hcc--cCCEE
Confidence 4999999999999999984 576665544422 1111 11122222 111111 123322 333 79999
Q ss_pred EEcccCChhcHHHHHHhC-CCCCcEEEeeccccc
Q 022578 77 YDINGREADEVEPILDAL-PNLEQFIYCSSAGVY 109 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v~ 109 (295)
|-+.... ....++..+ ....++|=+|...-+
T Consensus 75 FlalPhg--~s~~~v~~l~~~g~~VIDLSadfR~ 106 (349)
T COG0002 75 FLALPHG--VSAELVPELLEAGCKVIDLSADFRL 106 (349)
T ss_pred EEecCch--hHHHHHHHHHhCCCeEEECCccccc
Confidence 9886432 233444433 334458888875543
|
|
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.14 E-value=0.77 Score=42.24 Aligned_cols=30 Identities=20% Similarity=0.416 Sum_probs=27.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..|+..|+..|++|++.+++++..
T Consensus 14 GaG~MG~gIA~~la~aG~~V~l~D~~~e~l 43 (507)
T PRK08268 14 GAGAMGAGIAQVAAQAGHTVLLYDARAGAA 43 (507)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 469999999999999999999999998874
|
|
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=91.13 E-value=1.2 Score=37.67 Aligned_cols=92 Identities=22% Similarity=0.221 Sum_probs=57.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCe-EEEEecCCC-hHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~-~~~~~~~~~~~~~d~vi~ 78 (295)
+|++|-+|..+++.+...|.+|+++++++...... .. .++ .++..+-.+ .+.+.......++|.+++
T Consensus 146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~ 214 (323)
T cd08241 146 LGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA---------RA--LGADHVIDYRDPDLRERVKALTGGRGVDVVYD 214 (323)
T ss_pred EcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH---------HH--cCCceeeecCCccHHHHHHHHcCCCCcEEEEE
Confidence 47889999999999999999999998876552111 11 112 122221111 233444444347999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+.+. ......++.+....+++.++.
T Consensus 215 ~~g~--~~~~~~~~~~~~~g~~v~~~~ 239 (323)
T cd08241 215 PVGG--DVFEASLRSLAWGGRLLVIGF 239 (323)
T ss_pred CccH--HHHHHHHHhhccCCEEEEEcc
Confidence 9874 345556677775567887775
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.18 Score=42.80 Aligned_cols=30 Identities=17% Similarity=0.395 Sum_probs=27.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|.+|..++..|++.|++|++.+++++..
T Consensus 10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~l 39 (291)
T PRK06035 10 GSGVMGQGIAQVFARTGYDVTIVDVSEEIL 39 (291)
T ss_pred CccHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 579999999999999999999999988763
|
|
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=91.02 E-value=7.3 Score=33.38 Aligned_cols=115 Identities=13% Similarity=0.129 Sum_probs=66.3
Q ss_pred cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccCChh
Q 022578 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREAD 85 (295)
Q Consensus 6 ~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~~~ 85 (295)
|-|+.+++.|++.||+|++.+|++........ ..+. ..++... ++..++.+ ++|+||-+.. +..
T Consensus 30 ~gGspMArnLlkAGheV~V~Drnrsa~e~e~~----e~La--eaGA~~A-------aS~aEAAa--~ADVVIL~LP-d~a 93 (341)
T TIGR01724 30 YGGSRMAIEFAMAGHDVVLAEPNREFMSDDLW----KKVE--DAGVKVV-------SDDKEAAK--HGEIHVLFTP-FGK 93 (341)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCChhhhhhhhh----HHHH--HCCCeec-------CCHHHHHh--CCCEEEEecC-CHH
Confidence 67999999999999999999987654211000 0001 0233221 23456777 8999998876 344
Q ss_pred cHHHH----HHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh--hcCCcEEEeccCeeec
Q 022578 86 EVEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYG 156 (295)
Q Consensus 86 ~~~~l----l~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~--~~~~~~~i~R~~~i~g 156 (295)
.++.+ +..+...+-+|-.||+.. ...+...|..++ ...+.++.+-|+.|=|
T Consensus 94 aV~eVl~GLaa~L~~GaIVID~STIsP--------------------~t~~~~~e~~l~~~r~d~~v~s~HP~~vP~ 150 (341)
T TIGR01724 94 GTFSIARTIIEHVPENAVICNTCTVSP--------------------VVLYYSLEKILRLKRTDVGISSMHPAAVPG 150 (341)
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCCH--------------------HHHHHHHHHHhhcCccccCeeccCCCCCCC
Confidence 44444 444444456666776653 111233444443 3456677777766654
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.97 E-value=0.36 Score=40.70 Aligned_cols=29 Identities=31% Similarity=0.297 Sum_probs=26.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..++..|.+.|++|++.+|+++.
T Consensus 7 G~G~mG~sla~~L~~~g~~V~~~d~~~~~ 35 (279)
T PRK07417 7 GLGLIGGSLGLDLRSLGHTVYGVSRREST 35 (279)
T ss_pred eecHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 47999999999999999999999998765
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=90.97 E-value=2.5 Score=37.53 Aligned_cols=103 Identities=16% Similarity=0.064 Sum_probs=62.2
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCCC---CC--------CchhhhhccCCeEE--EEecCCChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP---GE--------SDQEFAEFSSKILH--LKGDRKDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~---~~--------~~~~~~~~~~~v~~--~~~D~~~~~~~~ 65 (295)
|.|-+|+.++..|...|. ++++++.+.-.. ..+.. .. ....+.+..+.+++ +...++ .+...
T Consensus 45 G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~-~~~~~ 123 (390)
T PRK07411 45 GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLS-SENAL 123 (390)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccC-HHhHH
Confidence 578999999999999996 677777664331 11110 00 11123344455444 444443 44566
Q ss_pred HhhhcCCCcEEEEcccCChhcHHHHHH-hCC-CCCcEEEeecccccc
Q 022578 66 SSLSAKGFDVVYDINGREADEVEPILD-ALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~-~~~-~~~~~i~~Ss~~v~~ 110 (295)
+.+. ++|+||.+... . .++.++. +|. ....+|+.+..+-+|
T Consensus 124 ~~~~--~~D~Vvd~~d~-~-~~r~~ln~~~~~~~~p~v~~~~~g~~g 166 (390)
T PRK07411 124 DILA--PYDVVVDGTDN-F-PTRYLVNDACVLLNKPNVYGSIFRFEG 166 (390)
T ss_pred HHHh--CCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence 7888 99999999763 2 3455454 444 556788776655554
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.62 Score=40.62 Aligned_cols=88 Identities=18% Similarity=0.172 Sum_probs=52.7
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCC---CccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|.+|...++.+...|.+|++++|+. .+.. +.. .-+++.+ |..+.+ +.+.....++|+||+++
T Consensus 181 ~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~----------~~~-~~Ga~~v--~~~~~~-~~~~~~~~~~d~vid~~ 246 (355)
T cd08230 181 AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD----------IVE-ELGATYV--NSSKTP-VAEVKLVGEFDLIIEAT 246 (355)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH----------HHH-HcCCEEe--cCCccc-hhhhhhcCCCCEEEECc
Confidence 59999999988888899999999843 2211 111 1234433 332221 11111123799999999
Q ss_pred cCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 81 GREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
|.. ......++.++...+++.++..
T Consensus 247 g~~-~~~~~~~~~l~~~G~~v~~G~~ 271 (355)
T cd08230 247 GVP-PLAFEALPALAPNGVVILFGVP 271 (355)
T ss_pred CCH-HHHHHHHHHccCCcEEEEEecC
Confidence 843 3455667777744577776643
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.48 Score=39.53 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=45.3
Q ss_pred cCCcchHHHHHHHHHCCC----eEEEE-ecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 3 GTRFIGVFLSRLLVKEGH----QVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
|.|.+|..+++.|++.|+ +|++. .|++++... + .+ .++... .+ ..++.+ ++|+||
T Consensus 7 G~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~-~--------~~--~g~~~~----~~---~~e~~~--~aDvVi 66 (266)
T PLN02688 7 GAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDV-F--------QS--LGVKTA----AS---NTEVVK--SSDVII 66 (266)
T ss_pred CCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHH-H--------HH--cCCEEe----CC---hHHHHh--cCCEEE
Confidence 489999999999999998 88888 776655211 1 11 233321 12 234556 899999
Q ss_pred EcccCChhcHHHHHHhC
Q 022578 78 DINGREADEVEPILDAL 94 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~ 94 (295)
-+. .+.....+++.+
T Consensus 67 l~v--~~~~~~~vl~~l 81 (266)
T PLN02688 67 LAV--KPQVVKDVLTEL 81 (266)
T ss_pred EEE--CcHHHHHHHHHH
Confidence 988 345566665544
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=90.85 E-value=1.3 Score=37.31 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=57.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeE-EEEecCCC-hHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~-~~~~~~~~~~~~~d~vi~ 78 (295)
.|++|.+|..+++.+...|.+|+++++++.+.... .+ .+++ ++..+-.+ .+.+.......++|.+++
T Consensus 143 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~ 211 (320)
T cd05286 143 HAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA---------RA--AGADHVINYRDEDFVERVREITGGRGVDVVYD 211 (320)
T ss_pred EcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH---------HH--CCCCEEEeCCchhHHHHHHHHcCCCCeeEEEE
Confidence 37889999999999999999999988766552111 11 1222 22221111 123333443347999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+.+. ......++.++...+++.++..
T Consensus 212 ~~~~--~~~~~~~~~l~~~g~~v~~g~~ 237 (320)
T cd05286 212 GVGK--DTFEGSLDSLRPRGTLVSFGNA 237 (320)
T ss_pred CCCc--HhHHHHHHhhccCcEEEEEecC
Confidence 9874 3455566677755688877653
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=90.83 E-value=2.5 Score=36.14 Aligned_cols=105 Identities=18% Similarity=0.240 Sum_probs=64.5
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCCC---CC--------CchhhhhccCC--eEEEEecCCChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP---GE--------SDQEFAEFSSK--ILHLKGDRKDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~---~~--------~~~~~~~~~~~--v~~~~~D~~~~~~~~ 65 (295)
|.|.+|..+++.|...|. ++++++.+.-+. ..++. .. ....+.+..+. ++.+..++.+.+...
T Consensus 6 GaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~~~~~~ 85 (312)
T cd01489 6 GAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKDPDFNV 85 (312)
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCCccchH
Confidence 579999999999999985 788888775442 11110 00 01112333344 444556666544345
Q ss_pred HhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccccc
Q 022578 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
+.++ ++|+||.+.- +...-..+-+.|. ....+|...+.+.+|
T Consensus 86 ~f~~--~~DvVv~a~D-n~~ar~~in~~c~~~~ip~I~~gt~G~~G 128 (312)
T cd01489 86 EFFK--QFDLVFNALD-NLAARRHVNKMCLAADVPLIESGTTGFLG 128 (312)
T ss_pred HHHh--cCCEEEECCC-CHHHHHHHHHHHHHCCCCEEEEecCccee
Confidence 6777 9999999864 4444444455555 556788877776655
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >TIGR00877 purD phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
Probab=90.83 E-value=0.77 Score=41.20 Aligned_cols=65 Identities=12% Similarity=-0.031 Sum_probs=46.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|+|..+..+++.+.+.|+.++++........... ....++..|..|.+.+.++.++.++|.||-.
T Consensus 7 G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~d~~~l~~~~~~~~id~vi~~ 71 (423)
T TIGR00877 7 GNGGREHALAWKLAQSPLVKYVYVAPGNAGTARL------------AKNKNVAISITDIEALVEFAKKKKIDLAVIG 71 (423)
T ss_pred CCChHHHHHHHHHHhCCCccEEEEECCCHHHhhh------------cccccccCCCCCHHHHHHHHHHhCCCEEEEC
Confidence 4567799999999998876666544333322111 2234556799999999999998999999854
|
This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes. |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.75 E-value=1.4 Score=37.65 Aligned_cols=90 Identities=19% Similarity=0.172 Sum_probs=57.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh----HHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~----~~~~~~~~~~~~d~v 76 (295)
.|++|.+|..+++.+...|.+++++++++++.... .+ .+++.+ .+..+. +.+.+.....++|.+
T Consensus 147 ~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~---------~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~ 214 (334)
T PTZ00354 147 HAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC---------KK--LAAIIL-IRYPDEEGFAPKVKKLTGEKGVNLV 214 (334)
T ss_pred EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--cCCcEE-EecCChhHHHHHHHHHhCCCCceEE
Confidence 47899999999999999999988887776552111 11 122211 122222 234444444579999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEee
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
+++.+ .......++.+....++|.++
T Consensus 215 i~~~~--~~~~~~~~~~l~~~g~~i~~~ 240 (334)
T PTZ00354 215 LDCVG--GSYLSETAEVLAVDGKWIVYG 240 (334)
T ss_pred EECCc--hHHHHHHHHHhccCCeEEEEe
Confidence 99976 345566677777556888766
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=90.72 E-value=0.81 Score=39.83 Aligned_cols=71 Identities=24% Similarity=0.215 Sum_probs=43.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhh--cCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~--~~~~d~vi~ 78 (295)
.||+|-+|+..++-+...|..+++.+++.++... .+...-.+. .|+.+++-++...+ ..++|+|++
T Consensus 164 ~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l----------~k~lGAd~v--vdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 164 LGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL----------VKKLGADEV--VDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred EeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH----------HHHcCCcEe--ecCCCHHHHHHHHhhcCCCccEEEE
Confidence 4899999999999999999444444555444211 111122222 35556544444433 237999999
Q ss_pred cccCC
Q 022578 79 INGRE 83 (295)
Q Consensus 79 ~a~~~ 83 (295)
|.|..
T Consensus 232 ~vg~~ 236 (347)
T KOG1198|consen 232 CVGGS 236 (347)
T ss_pred CCCCC
Confidence 99864
|
|
| >PF03686 UPF0146: Uncharacterised protein family (UPF0146); InterPro: IPR005353 The function of this family of proteins is unknown | Back alignment and domain information |
|---|
Probab=90.66 E-value=0.65 Score=33.65 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=45.1
Q ss_pred HHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccCChhcHHH
Q 022578 10 FLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEP 89 (295)
Q Consensus 10 ~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~ 89 (295)
.+++.|.+.|++|++++-.+...+ .+++++..|+++|+. ++.+ ++|.|+..-. .++-...
T Consensus 27 ~vA~~L~~~G~dV~~tDi~~~~a~---------------~g~~~v~DDif~P~l--~iY~--~a~lIYSiRP-P~El~~~ 86 (127)
T PF03686_consen 27 EVAKKLKERGFDVIATDINPRKAP---------------EGVNFVVDDIFNPNL--EIYE--GADLIYSIRP-PPELQPP 86 (127)
T ss_dssp HHHHHHHHHS-EEEEE-SS-S-------------------STTEE---SSS--H--HHHT--TEEEEEEES---TTSHHH
T ss_pred HHHHHHHHcCCcEEEEECcccccc---------------cCcceeeecccCCCH--HHhc--CCcEEEEeCC-ChHHhHH
Confidence 578889999999999998887422 478899999999984 6777 9999987654 3567777
Q ss_pred HHHhCC--CCCcEE
Q 022578 90 ILDALP--NLEQFI 101 (295)
Q Consensus 90 ll~~~~--~~~~~i 101 (295)
+++.++ +..-+|
T Consensus 87 il~lA~~v~adlii 100 (127)
T PF03686_consen 87 ILELAKKVGADLII 100 (127)
T ss_dssp HHHHHHHHT-EEEE
T ss_pred HHHHHHHhCCCEEE
Confidence 888777 543333
|
; PDB: 2K4M_A. |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=90.58 E-value=1.4 Score=37.40 Aligned_cols=93 Identities=22% Similarity=0.188 Sum_probs=56.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+|++|.+|..+++.+...|.+|+++++++.... .. .+ .+++.+ .+.... +.+.......++|.++
T Consensus 146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~--------~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i 213 (325)
T TIGR02824 146 HGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-AC--------EA--LGADIA-INYREEDFVEVVKAETGGKGVDVIL 213 (325)
T ss_pred EcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------HH--cCCcEE-EecCchhHHHHHHHHcCCCCeEEEE
Confidence 478899999999999999999999888765521 10 11 122211 122222 2333333334699999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
++++. ......++.+....++|.++...
T Consensus 214 ~~~~~--~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
T TIGR02824 214 DIVGG--SYLNRNIKALALDGRIVQIGFQG 241 (325)
T ss_pred ECCch--HHHHHHHHhhccCcEEEEEecCC
Confidence 99874 24445556666556888877543
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=90.47 E-value=0.45 Score=42.64 Aligned_cols=72 Identities=13% Similarity=0.060 Sum_probs=43.9
Q ss_pred CCcCCcchHHHHHHHHHC-------CC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC
Q 022578 1 MGGTRFIGVFLSRLLVKE-------GH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 71 (295)
+|++|.+|++++..|+.. +. ++..+++..+..........+.... ...++.+..+ +. +.++
T Consensus 106 IGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~-~~~~v~i~~~---~y----e~~k-- 175 (444)
T PLN00112 106 SGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYP-LLREVSIGID---PY----EVFQ-- 175 (444)
T ss_pred ECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhh-hcCceEEecC---CH----HHhC--
Confidence 588899999999999987 54 7888888777643221111110000 1122322222 32 4555
Q ss_pred CCcEEEEcccC
Q 022578 72 GFDVVYDINGR 82 (295)
Q Consensus 72 ~~d~vi~~a~~ 82 (295)
+.|+||-++|.
T Consensus 176 daDiVVitAG~ 186 (444)
T PLN00112 176 DAEWALLIGAK 186 (444)
T ss_pred cCCEEEECCCC
Confidence 99999999987
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 8e-22
Identities = 47/258 (18%), Positives = 81/258 (31%), Gaps = 46/258 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GGT F+G ++ + +G+ + K E+ D
Sbjct: 9 GGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----------AINDYEY------RVSDY 51
Query: 59 KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LEQ--------FIYC 103
D + D V + I + N + +Y
Sbjct: 52 TLEDLIN---QLNDVDAVVHLAA-TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYA 107
Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP- 157
S+ Y LP E + P + KL E + KG+ +LR ++YG
Sbjct: 108 STISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFN 167
Query: 158 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
N + FF + G + + + + + + KD A++ + L EK S FNI
Sbjct: 168 EKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS-GTFNIGS 226
Query: 218 EKYVTFDGLARACAKVTG 235
+T +A G
Sbjct: 227 GDALTNYEVANTINNAFG 244
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 3e-21
Identities = 43/260 (16%), Positives = 72/260 (27%), Gaps = 43/260 (16%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +G +R + GH + L R P Q A + + D+
Sbjct: 20 GATGLLGHHAARAIRAAGHDLVLIHR---------PSSQIQRLAYLEPEC--RVAEMLDH 68
Query: 62 DFVKSSLSAKGFDVVY------DINGREADEVEP--------ILDAL--PNLEQFIYCSS 105
++ +L +G D V R E A + + +Y S
Sbjct: 69 AGLERAL--RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126
Query: 106 AGVY-LKSDLLPHCETDTVDPKSRHKG-----KLNTES-VLE--SKGVNWTSLRPVYIYG 156
A LP E D K K + E G+ P + G
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLG 186
Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
L+ P + G V + R + L + + + ++
Sbjct: 187 ELDIGPTTGRVITAIGNGEMTHYVAGQRNVI---DAAEAGRGLLMALERGRIG-ERYLLT 242
Query: 217 GEKYVTFDGLARACAKVTGL 236
G + L R A++ G
Sbjct: 243 GH-NLEMADLTRRIAELLGQ 261
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 1e-20
Identities = 39/232 (16%), Positives = 68/232 (29%), Gaps = 41/232 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
G + F+G L + G +VT R I + L + K D
Sbjct: 11 GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH-------------LKVKKADVSS 57
Query: 61 YDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNL---------EQFIYCSSAGV 108
D V KG D V + D + + + +F+ AG
Sbjct: 58 LDEVCEVC--KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115
Query: 109 YLKSDLLPHCETDTVD----PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
+ L ++ V P + G+ +++ K ++W P P
Sbjct: 116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPG------ 169
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
+ + G V+D A A + L + K ++ F I
Sbjct: 170 VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMIDELEHPKHHQERFTIG 218
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 86.5 bits (214), Expect = 7e-20
Identities = 34/238 (14%), Positives = 76/238 (31%), Gaps = 16/238 (6%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +IG +++ + GH L R + + + F + I+H G D+
Sbjct: 11 GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH--GSIDDH 68
Query: 62 DFVKSSLSAKGFDVVYD-INGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
+ ++ K DVV + + + I+ A+ + + S G
Sbjct: 69 ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN------DVDN 120
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
KS + K +E++G+ +T + G + +
Sbjct: 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG--YFLRSLAQAGLTAPPRDKVV 178
Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVTG 235
I G G +D+ ++ + + + + + ++ + L K
Sbjct: 179 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 236
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 84.7 bits (209), Expect = 9e-20
Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 29/222 (13%)
Query: 2 GGTRFIG-VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G I + LL +TL+ R ++ ++G ++
Sbjct: 12 GAAGQIAQXLTATLLTYTDMHITLYGRQ--------LKTRIPPEIIDHERVTVIEGSFQN 63
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC 118
++ ++ +VV+ ++ I+ AL N+ + I S AG+ + +
Sbjct: 64 PGXLEQAV--TNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEK 121
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
T P S +G+ +VL +N+T LR ++Y E
Sbjct: 122 WTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYEL-------IPEGAQ 174
Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS---RQVFNISG 217
+ + + + +A +L + R +
Sbjct: 175 FNDAQV------SREAVVKAIFDILHAADETPFHRTSIGVGE 210
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 84.6 bits (209), Expect = 1e-19
Identities = 39/232 (16%), Positives = 65/232 (28%), Gaps = 40/232 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G + GH+VT R I Q I L+ D D
Sbjct: 7 GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD------------INILQKDIFDL 54
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------EQFIYCSSAGV-YLK 111
+VV D G DE E + +L +L + + A +
Sbjct: 55 T----LSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQID 110
Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEW 166
D E+ + + LE +WT + P ++ P E
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP------GER 164
Query: 167 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
+ G ++D A A + + + F ++G+
Sbjct: 165 TGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHLNEHFTVAGK 213
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-19
Identities = 54/260 (20%), Positives = 89/260 (34%), Gaps = 46/260 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
G IG ++ LL++ G +V F G+ + L + F ++G
Sbjct: 28 GICGQIGSHIAELLLERGDKVVGIDNFATGR---REHLKDHPNLTF---------VEGSI 75
Query: 59 KDYDFVKSSLSAKGFDVVYDINGREADEVE----PILDALPNL---------------EQ 99
D+ V + D V ++ A + D L N +
Sbjct: 76 ADHALVNQLIGDLQPDAV--VH--TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGR 131
Query: 100 FIYCSSAGVY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVLESKGVNWTSLRPVYIYG 156
F+Y +A Y +K P +P + K E LE G+++ + R + G
Sbjct: 132 FVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVG 191
Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
P N + FF RL G+ + VKDLARA V+ + + ++ S
Sbjct: 192 PRNVSGPLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAV--DGVGHGAYHFS 246
Query: 217 GEKYVTFDGLARACAKVTGL 236
V L A + L
Sbjct: 247 SGTDVAIKELYDAVVEAMAL 266
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 4e-18
Identities = 47/266 (17%), Positives = 92/266 (34%), Gaps = 54/266 (20%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG FIG + L E +++ + + G + + A +K D
Sbjct: 8 GGAGFIGSHVVDKLS-ESNEIVVIDNLSSGNE---EFVNEA-----ARL------VKADL 52
Query: 59 KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
D KG + V+ + + R E P N LE +
Sbjct: 53 AADDIKDY---LKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSR 108
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
++ S++ VY ++ ++P E P S + KL E+++ + + R +
Sbjct: 109 IVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168
Query: 155 YGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQV---TQLGHVKDLARAFVQVLGNEKASR 210
G + + ++ + + I G+G Q ++ D A + L ++
Sbjct: 169 IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYI---YISDCVDAMLFGLRGDERV- 224
Query: 211 QVFNISGEKYVTFDGLARACAKVTGL 236
+FNI E + +A + GL
Sbjct: 225 NIFNIGSEDQIKVKRIAEIVCEELGL 250
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 8e-18
Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 44/229 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G+ V+ G++VT+ R + + + P A + GD
Sbjct: 10 GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----RPAHV------VVGDVLQA 58
Query: 62 DFVKSSLSAKGFDVVYDING--READEVEPILDALPNL---------EQFIYCSSAGVYL 110
V ++ G D V + G + + + N+ ++ + C+SA +
Sbjct: 59 ADVDKTV--AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116
Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
+P D R VL G+ + ++ P + P+
Sbjct: 117 DPTKVPPRLQAVTDDHIR------MHKVLRESGLKYVAVMP----PHIGDQPLTG----A 162
Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
P I DL ++ L ++ S +
Sbjct: 163 YTVTLDGRGPSRVI------SKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 9e-18
Identities = 52/273 (19%), Positives = 84/273 (30%), Gaps = 51/273 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
G FIG L L+K +V F G L + S ++GD
Sbjct: 34 GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR---NLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 59 KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
++ D ++ G D V IN +PI N+
Sbjct: 91 RNLDDCNNAC--AGVDYVLHQAALGSVPRSIN-------DPITSNATNIDGFLNMLIAAR 141
Query: 98 ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTS 148
+ F Y +S+ Y LP E P S + K E + G +
Sbjct: 142 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 201
Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
LR ++G Y V + + G + I G G ++++ +A +
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 261
Query: 204 -GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
A QV+NI+ + + L A
Sbjct: 262 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLA 294
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 2e-17
Identities = 48/248 (19%), Positives = 83/248 (33%), Gaps = 38/248 (15%)
Query: 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--------ESDQEFAEFSSKILHL 54
G +G+ L+R L +GH+VT R P+ + ++ +IL
Sbjct: 10 GCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVY 69
Query: 55 KGDRKDYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLK 111
++A + D Y ++ E + L AL L+ + SS GVY +
Sbjct: 70 ------------CVAASEYSDEHYRLSYVEG--LRNTLSALEGAPLQHVFFVSSTGVYGQ 115
Query: 112 SDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
E K K L E++L + T LR IYGP + +
Sbjct: 116 EVEEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIYGPGRLRMIR-----Q 168
Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLAR 228
+ P T H D A ++ +++ ++ + + L R
Sbjct: 169 AQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLR 225
Query: 229 ACAKVTGL 236
A G+
Sbjct: 226 WLADRQGI 233
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 80.0 bits (197), Expect = 2e-17
Identities = 30/243 (12%), Positives = 75/243 (30%), Gaps = 21/243 (8%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGT +IG + + GH + R ++ + F + +K++ + D+
Sbjct: 11 GGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFKQLGAKLI--EASLDDH 67
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVE-----PILDA---LPNLEQFIYCSSAGVYLKSD 113
+ +L K DVV +++A N+++F+
Sbjct: 68 QRLVDAL--KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP---- 121
Query: 114 LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
E K +E+ + +T + G + + H +
Sbjct: 122 --DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF-AGSLAQLDGHMMPP 178
Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
+ I G G D+ ++ + + + + I ++ + + +
Sbjct: 179 RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWER 238
Query: 233 VTG 235
++
Sbjct: 239 LSE 241
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 79.2 bits (195), Expect = 3e-17
Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 19/240 (7%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
G T IG + +K G+ R I P ++ + S ++ L+GD D
Sbjct: 9 GPTGAIGRHIVWASIKAGNPTYALVR--KTITAANPETKEELIDNYQSLGVILLEGDIND 66
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVE-PILDALP--NLEQFIYCSSAGVYLKSDLLPH 117
++ + ++ K D+V GR E + I+ A+ + + S G+
Sbjct: 67 HETLVKAI--KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL-------DV 117
Query: 118 CETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
D V+P + + K + V+E++GV +T L G +
Sbjct: 118 DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTG--YFLRNLAQLDATDPPRDK 175
Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVTG 235
+ I G G D+ ++ + + +I K Y+T + + K G
Sbjct: 176 VVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG 235
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 5e-17
Identities = 60/266 (22%), Positives = 97/266 (36%), Gaps = 50/266 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG FIG L LV+ G++V + + G+ + + AE D
Sbjct: 7 GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR---EFVNPS-----AEL------HVRDL 52
Query: 59 KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
KDY + DVV+ + R + EPI+ N LE
Sbjct: 53 KDYSWGA----GIKGDVVFHFAANPEVRLSTT-EPIVHFNENVVATFNVLEWARQTGVRT 107
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
++ SS+ VY +D++P E + P S + K E + GV ++R +
Sbjct: 108 VVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167
Query: 155 YGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVL---GNEKASR 210
GP + V F +L+ + + G G Q +V+D A + A
Sbjct: 168 VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227
Query: 211 QVFNISGEKYVTFDGLARACAKVTGL 236
N+ V +A+ A+V GL
Sbjct: 228 LALNVGNVDAVRVLDIAQIVAEVLGL 253
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 3e-15
Identities = 41/222 (18%), Positives = 85/222 (38%), Gaps = 34/222 (15%)
Query: 2 GGTRFIGVFL-SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G I + ++L K+ + TLF R A I + P + + GD +
Sbjct: 30 GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----------TNSQIIMGDVLN 78
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEP--ILDALP--NLEQFIYCSSAGVYLKSDLLP 116
+ +K ++ +G D+VY E +++ ++ A+ ++++ I+ S G+Y +
Sbjct: 79 HAALKQAM--QGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF 136
Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
+ V K +E+ G+ +T LRP + L + ++ R
Sbjct: 137 VEWNNAV-IGEPLKPFRRAADAIEASGLEYTILRPAW----LTDEDIIDYEL----TSRN 187
Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISG 217
P G+ + K +A ++ EK + I+
Sbjct: 188 EPFKGTIV------SRKSVAALITDIIDKPEKHIGENIGINQ 223
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 73.6 bits (180), Expect = 5e-15
Identities = 50/277 (18%), Positives = 87/277 (31%), Gaps = 54/277 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
G T IG L+ +L +V R P + I +++
Sbjct: 8 GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP------------INYVQC 55
Query: 57 DRKDYDFVKSSLSAKG-----FDVVYDINGREADEVEP-------ILDAL----PNLEQF 100
D D D ++ LS F V + E + E +LDA+ PNL+
Sbjct: 56 DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHI 115
Query: 101 IYCSSAGVY---------LKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTS 148
+ Y ++S P+ E L E V + +G+ W+
Sbjct: 116 SLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSV 175
Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKA------GRPIPIPGSGIQVTQLGHVKD---LARAF 199
RP I+G Y+ + + A G+ + G D +A
Sbjct: 176 HRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235
Query: 200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236
+ + A + FN+S + + A+ G+
Sbjct: 236 IWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV 272
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 5e-14
Identities = 39/238 (16%), Positives = 88/238 (36%), Gaps = 18/238 (7%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGT +IG F+ R + H ++ R P + + +EF I ++G+ +++
Sbjct: 11 GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI--IEGEMEEH 68
Query: 62 DFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPH 117
+ + S L K D+V + I++A+ N+++F+ + LP
Sbjct: 69 EKMVSVL--KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLP- 125
Query: 118 CETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
+S + K +E+ + +T + + I
Sbjct: 126 ------PFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPH--PNRNDDI 177
Query: 178 PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVT 234
I G+G L + +D+A+ ++V + + ++ K ++ + L +
Sbjct: 178 VIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKS 235
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 6e-14
Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 52/268 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G + IG L L ++ + + IA + +F + D +
Sbjct: 6 GSSGQIGTELVPYLAEKYGKKNV-------IASDIVQRDTGGI-KF------ITLDVSNR 51
Query: 62 DFVKSSLSAKGFDVVY------------------DINGREADEVEPILDAL--PNLEQFI 101
D + ++ D ++ +N + IL+A +E+ +
Sbjct: 52 DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVN---MNGTYNILEAAKQHRVEKVV 108
Query: 102 YCSSAGVYLKSDLLPHCETDTV-DPKSR-HKGKLNTESVLES----KGVNWTSLRPVYIY 155
S+ GV+ + T+ P++ K+ E + + G++ SLR I
Sbjct: 109 IPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168
Query: 156 GP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS- 209
F+ + + + ++ D +A V + ++
Sbjct: 169 SYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228
Query: 210 --RQVFNISGEKYVTFDGLARACAKVTG 235
R +N++ T L +
Sbjct: 229 VLRNGYNVTAYT-FTPSELYSKIKERIP 255
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-13
Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 53/232 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G + +L L +GH+ R + +L + + + ++
Sbjct: 28 GANGKVARYLLSELKNKGHEPVAMVRNEEQ-GPELRERGASDI---------VVANLEE- 76
Query: 62 DFVKSSLSA--KGFDVVYDING--READEVEP----------ILDA--LPNLEQFIYCSS 105
S D V G + + +++FI SS
Sbjct: 77 -----DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131
Query: 106 AGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
G D P ++ + K + L+ +++T +RP
Sbjct: 132 VGTV-DPDQGP------MNMRHYLVAKRLADDELKRSSLDYTIVRPG------------- 171
Query: 166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
+ G+ + + ++T+ D+A+ +++ + + F +
Sbjct: 172 PLSNEESTGK-VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 2e-13
Identities = 40/243 (16%), Positives = 88/243 (36%), Gaps = 34/243 (13%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GGT +IG + + +K GH +FTR K + + S + +KG+
Sbjct: 18 GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----------SLGAIIVKGEL 67
Query: 59 KDYDFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDL 114
+++ + + K DVV + + + IL+A+ N+++F+ + +
Sbjct: 68 DEHEKLVELM--KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINA 125
Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
LP ++ + K +E + +T + +
Sbjct: 126 LPPF-------EALIERKRMIRRAIEEANIPYTYVSANCFASYF-----INYLLRPYDPK 173
Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYVTFDGLARACAK 232
I + G+G + + +D+ ++V + +A + ++ S +T L K
Sbjct: 174 DEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI-ITQLELISRWEK 232
Query: 233 VTG 235
G
Sbjct: 233 KIG 235
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 2e-13
Identities = 48/279 (17%), Positives = 88/279 (31%), Gaps = 51/279 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
G FIG L L+K V F+ G L E S+ ++GD
Sbjct: 32 GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY---NLDEVKTLVSTEQWSRFCFIEGDI 88
Query: 59 KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
+D + + KG D V I +PI N+
Sbjct: 89 RDLTTCEQVM--KGVDHVLHQAALGSVPRSIV-------DPITTNATNITGFLNILHAAK 139
Query: 98 ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTS 148
+ F Y +S+ Y LP E + +P S ++ ++ + + G
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIG 199
Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
LR ++G Y V + + G + I G G ++ ++ + +
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259
Query: 204 -GNEKASRQVFNISGEKYVTFDGLARACAKVTGLLDFRS 241
+ A ++N++ T + L+ L+
Sbjct: 260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHID 298
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-13
Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 50/231 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +G L + L +Q+ R K Q +K D
Sbjct: 7 GSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNN---------------VKAVHFDV 50
Query: 62 DFVKSSLSA--KGFDVVYDINGREADEVEPI-LDALPNL---------EQFIYCSSAGVY 109
D+ ++ G D + +++G + + L L ++FI S+
Sbjct: 51 DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS- 109
Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFF 168
L+ + D + + K + L + +++T ++P +
Sbjct: 110 LQPEKWIGAGFDALKD--YYIAKHFADLYLTKETNLDYTIIQPGALTE------------ 155
Query: 169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
+ +V+ + D+A +++ + + +V ++ +G+
Sbjct: 156 -----EEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK 201
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 8e-13
Identities = 37/250 (14%), Positives = 74/250 (29%), Gaps = 40/250 (16%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G T G L R+ GH V K IA++L + +G +
Sbjct: 12 GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF---------QGPLLN 62
Query: 61 YDFVKSSLSA--KGFDVVYDI-NGREADEVE---PILDA---LPNLEQFIYCSSAGVYLK 111
+ +G + + + DE+ + DA ++ +IY S
Sbjct: 63 ---NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS------- 112
Query: 112 SDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
+P P K E+ + G+ T + P +
Sbjct: 113 ---MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMEL 169
Query: 171 LKAGR---PIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDG 225
+ G P + L D+ A +Q+ + +K + ++ E ++
Sbjct: 170 MPDGTFEWHAPFDPDI-PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQ 227
Query: 226 LARACAKVTG 235
+ A ++
Sbjct: 228 VCAAFSRALN 237
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 64.7 bits (157), Expect = 1e-12
Identities = 28/233 (12%), Positives = 55/233 (23%), Gaps = 42/233 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G + + GH+V R A G + ++
Sbjct: 7 GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-DRLGATVAT------------LVKEPL 53
Query: 62 DFVKSSLSAKGFDVVYDING---------READEVEPILDAL--PNLEQFIYCSSAGVYL 110
++ L D V D D ++ L + SA + +
Sbjct: 54 VLTEADL--DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAM 111
Query: 111 KSDLLPHCETDTVDPKSR------HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
P S+ + + + VNW + P +
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS------G 165
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
+ + + ++A A + L + A R +
Sbjct: 166 PATSYVAGKDTLLVGEDGQSHI----TTGNMALAILDQLEHPTAIRDRIVVRD 214
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 4e-12
Identities = 61/273 (22%), Positives = 99/273 (36%), Gaps = 58/273 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG FIG + L+ G +V + GK + +P F + D
Sbjct: 7 GGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKG-----VPF------FRVDL 52
Query: 59 KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
+D + V+ + V + + + E +P+LD N LE +
Sbjct: 53 RDKEGVERAFREFRPTHVSHQAAQASVKVSVE-DPVLDFEVNLLGGLNLLEACRQYGVEK 111
Query: 100 FIYCSSAG-VY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPV 152
++ S+ G +Y + ET PKS + K E L G+ W SLR
Sbjct: 112 LVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYG 171
Query: 153 YIYGPLNYNPVEE-----WFFHRLKAGRPIPI-----PGSGIQVTQLGHVKDLARAFVQV 202
+YGP +P E F R+ G P+ + PG V +V D+A A
Sbjct: 172 NVYGP-RQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230
Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
L + ++N+ + T + A A+ G
Sbjct: 231 L---FSLEGIYNVGTGEGHTTREVLMAVAEAAG 260
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 4e-12
Identities = 35/270 (12%), Positives = 68/270 (25%), Gaps = 65/270 (24%)
Query: 2 GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
G + G + + L + R A +++ GE+D GD
Sbjct: 11 GASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKIGGEADV-----------FIGDIT 58
Query: 60 DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP------------------------ 95
D D + + +G D + +
Sbjct: 59 DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116
Query: 96 -------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTS 148
++ + S G L + K E L G +T
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNI-----LVWKRKAEQYLADSGTPYTI 171
Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
+R + L G+ + + + D+A +Q L E+A
Sbjct: 172 IRAGGLLDKEGG-------VRELLVGKDDELLQTDTKTV---PRADVAEVCIQALLFEEA 221
Query: 209 SRQVFNISGEKYVT---FDGLARACAKVTG 235
+ F++ + T ++VT
Sbjct: 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTS 251
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 5e-12
Identities = 50/287 (17%), Positives = 87/287 (30%), Gaps = 73/287 (25%)
Query: 2 GGTRFIGVFLSRLLVKEG-HQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
GG F+G L + L++ G +QV L + K + D F +
Sbjct: 39 GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRF------SET 85
Query: 57 DRKDYDFVKSSLSAKGFDVVYDINGREADEV-------EPILDALPN-------LEQ--- 99
D + S +D V+ A +P+ D N E+
Sbjct: 86 SITDDALLASLQ--DEYDYVF----HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139
Query: 100 ------FIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-------GKLNTESVL----ESK 142
+Y ++ + T+ D S H K+ E +
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199
Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW--------------FFHRLKAGRPIPIPGSGIQVTQ 188
+ R +YGP W F ++ G P+P+ G+
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259
Query: 189 LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
V+D+A + + V+NI+ K + LA ++TG
Sbjct: 260 FIFVEDVANGLIACA-ADGTPGGVYNIASGKETSIADLATKINEITG 305
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 6e-12
Identities = 48/257 (18%), Positives = 82/257 (31%), Gaps = 43/257 (16%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG +G L + +GH++ + F GK + LP + E G
Sbjct: 27 GGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIE---------GSV 74
Query: 59 KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LE--------QFIYC 103
D ++ + + V D + DA N + + +
Sbjct: 75 TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134
Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGP---LN 159
+A Y + +P P + + K E+ L V SLR + GP +
Sbjct: 135 QTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIG 194
Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
P F+ RLKAG+ V + D L + + VFN+ +GE
Sbjct: 195 PIPT---FYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSLQEGRPTG-VFNVSTGE 247
Query: 219 KYVTFDGLARACAKVTG 235
+ + + G
Sbjct: 248 GHSIKE-VFDVVLDYVG 263
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 63.9 bits (155), Expect = 7e-12
Identities = 35/242 (14%), Positives = 77/242 (31%), Gaps = 26/242 (10%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T FIG F++ + + R + + + + I + G +
Sbjct: 17 GATGFIGQFVATASLDAHRPTYILARPGPRSPS--KAKIFKALEDKGAII--VYGLINEQ 72
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPNLEQFIYCSSAGV---YLKSDLLPH 117
+ ++ L D+V G E+ + ++ A + G +L S+
Sbjct: 73 EAMEKILKEHEIDIVVSTVGGESILDQIALVKA---------MKAVGTIKRFLPSEF--G 121
Query: 118 CETDTVDPKSR----HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
+ + DP ++ K ++E G+ +T + I YN + L
Sbjct: 122 HDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH--PSEVLPP 179
Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
I G G D+ + ++ + + + + + + + LA K
Sbjct: 180 TDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEK 239
Query: 233 VT 234
Sbjct: 240 KI 241
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 2e-11
Identities = 54/328 (16%), Positives = 92/328 (28%), Gaps = 89/328 (27%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQL----PGESDQEFAEFSSKILH- 53
GG + G + L K+ ++V + R L P S + +
Sbjct: 18 GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK 77
Query: 54 ----LKGDRKDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPN--- 96
GD D++F+ S + D V Y + R + N
Sbjct: 78 SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS----RAVYTQHNNVIG 133
Query: 97 ----LE---------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL---- 139
L + + G Y P+ + + H G+ +T
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGT----PNIDIEEGYITITHNGRTDTLPYPKQAS 189
Query: 140 ----ESK--------------GVNWTSLRPVYIYGP--------------LNYNPVEEW- 166
SK G+ T L +YG L+Y+ V
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249
Query: 167 ---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYV 221
F + G P+ + G G Q ++D + + N + + VFN E++
Sbjct: 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 309
Query: 222 TFDGLARACAKVTGLLDFRSLNLCTTTP 249
+ LA K L + P
Sbjct: 310 VNE-LASLVTKAGSKLGLDVKKMTVPNP 336
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 9e-11
Identities = 46/237 (19%), Positives = 78/237 (32%), Gaps = 29/237 (12%)
Query: 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
+ LSR L +G ++ +R + + ++ L G+ D V
Sbjct: 15 YTARVLSRALAPQGWRIIGTSRNP---------DQMEAIRASGAEPLLWPGEEPSLDGVT 65
Query: 66 SSLSA----KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
L + G D V G + I Y S+ VY D ET
Sbjct: 66 HLLISTAPDSGGDPVLAALGDQ------IAARAAQFRWVGYLSTTAVYGDHDGAWVDETT 119
Query: 122 TVDPKS-RHKGKLN-TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
+ P + R + ++ + + R IYGP P +L G I
Sbjct: 120 PLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP-GRGPFS-----KLGKGGIRRI 173
Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236
QV HV+D+A+ + V+N+ ++ V + A++ GL
Sbjct: 174 IK-PGQVFSRIHVEDIAQVLAASMARPDPGA-VYNVCDDEPVPPQDVIAYAAELQGL 228
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 4e-10
Identities = 33/253 (13%), Positives = 73/253 (28%), Gaps = 54/253 (21%)
Query: 2 GGTRFIGVFLSRLLVKE-GHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
G IG L++ L K G + + + + P +
Sbjct: 9 GACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGP---------------FEVVN 53
Query: 58 RKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNL---------------EQ 99
D++ ++ + +Y + A E P N+ ++
Sbjct: 54 ALDFNQIEHLVEVHKITDIYLMAALLSATA-EKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKG--KLNTESVLESK----GVNWTSLRPV 152
+ SS V+ + + T+ P + + G K E E GV+ S+R
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVY-GISKQAGERWCEYYHNIYGVDVRSIRYP 171
Query: 153 YIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL---G 204
+ F++ A + S + ++ D A + ++
Sbjct: 172 GLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231
Query: 205 NEKASRQVFNISG 217
+ +N++
Sbjct: 232 EKIKIHSSYNLAA 244
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 6e-10
Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 32/187 (17%)
Query: 60 DYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV----YLKSDL 114
DY+ +S A G + I+G D I+ ++ AGV Y
Sbjct: 53 DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKA---ARDAGVKHIAYT-G-- 106
Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
E + H TE + + + +T LR Y V E +
Sbjct: 107 YAFAEESIIPLAHVHLA---TEYAIRTTNIPYTFLRNAL------YTDFFVNEGLRASTE 157
Query: 173 AGRPIPIPGSG----IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
+G + GSG + +LA A VL E + +N+ + TFD LA+
Sbjct: 158 SGAIVTNAGSGIVNSV------TRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQ 211
Query: 229 ACAKVTG 235
++V+G
Sbjct: 212 ILSEVSG 218
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 6e-10
Identities = 45/273 (16%), Positives = 93/273 (34%), Gaps = 55/273 (20%)
Query: 2 GGTRFIGVFLSRLLVKEG--HQVTL---FTRGKAPIAQQLPGESD-QEFAEFSSKILHLK 55
GG F+G L+ + +V + F + + F +++
Sbjct: 17 GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI--A 74
Query: 56 GDRKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE------------- 98
D + ++ L FD ++ + + L N +
Sbjct: 75 ADINNPLDLRR-LEKLHFDYLFHQAAVSDTTMLN---QELVMKTNYQAFLNLLEIARSKK 130
Query: 99 -QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG--KLNTESVL--ESKGVNWTSLRPVY 153
+ IY SSAGVY + P+ P++ + G KL + + S LR Y
Sbjct: 131 AKVIYASSAGVYGNTK-APNVVGKNESPENVY-GFSKLCMDEFVLSHSNDNVQVGLR--Y 186
Query: 154 --IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ----VTQLGHVKDLARAFVQV 202
+YGP + A + + + G Q V +++D+ +A V+
Sbjct: 187 FNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV----YIEDVIQANVKA 242
Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
+ +K+ V+N+ + +++ + + G
Sbjct: 243 MKAQKS--GVYNVGYSQARSYNEIVSILKEHLG 273
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 6e-10
Identities = 44/272 (16%), Positives = 74/272 (27%), Gaps = 60/272 (22%)
Query: 2 GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
GG FIG + + L +G + + G + + K D
Sbjct: 6 GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 55
Query: 58 RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
+ ++ + E D + ++D N +
Sbjct: 56 FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 110
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVY- 153
F+Y SSA Y + P S+ +L R Y
Sbjct: 111 FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFR--YF 168
Query: 154 -IYGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQV---TQLGHVKDLARAFVQVL 203
+YGP + V +L G P GS +V D+A + L
Sbjct: 169 NVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV---YVGDVADVNLWFL 225
Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
E +FN+ + +F +A A
Sbjct: 226 --ENGVSGIFNLGTGRAESFQAVADATLAYHK 255
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 8e-10
Identities = 37/232 (15%), Positives = 74/232 (31%), Gaps = 39/232 (16%)
Query: 11 LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA 70
++ + + R + G+ + DY +S + A
Sbjct: 17 TNQAIANHIDHFHIGVRNVEKVPDDWRGKV--SVRQL------------DYFNQESMVEA 62
Query: 71 -KGFDVVYDINGREADEVEPILDALPNLEQFIY-CSSAGV----YLKSDLLPHCETDTVD 124
KG D V I +P +E +Y +GV ++ + +
Sbjct: 63 FKGMDTVVFIPSIIHPSF----KRIPEVENLVYAAKQSGVAHIIFI-G--YYADQHNNPF 115
Query: 125 PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP-GSG 183
S + G +L + G+++T +R Y + + L + P G G
Sbjct: 116 HMSPYFGY--ASRLLSTSGIDYTYVRMAM------YMDPLKPYLPELMNMHKLIYPAGDG 167
Query: 184 IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
D+AR + ++ N + + +SG Y LA ++ +G
Sbjct: 168 --RINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSY-DMKELAAILSEASG 216
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 9e-10
Identities = 44/273 (16%), Positives = 81/273 (29%), Gaps = 71/273 (26%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
GG FIG L+R LV G +VT L P L+
Sbjct: 14 GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKP 58
Query: 58 RKDYDFVKSSLSAKGFDVVY--------------------DING--------READEVEP 89
+ + L +VY +++
Sbjct: 59 V--LELEERDL--SDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV----- 109
Query: 90 ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES-----KG 143
+ + + S+ VY ++D LP E + P+S + K+ E V +
Sbjct: 110 ------GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA 163
Query: 144 VNWTSLRPVYIYGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
+R +YGP + + L +P+ G G Q ++ D+ V +
Sbjct: 164 PEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223
Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
+ V N + ++ + + R +
Sbjct: 224 A--NRPLPSVVNFGSGQSLSVNDVIRILQATSP 254
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 49/256 (19%), Positives = 87/256 (33%), Gaps = 55/256 (21%)
Query: 2 GGTRFIGVFLSRLLVKEG-HQVTLFTR-GKAPIAQQL--PGESDQEFAEFSSKILHLKGD 57
GGT G ++R L+++G +V + TR + A++L G AE ++GD
Sbjct: 12 GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG------AEV------VQGD 59
Query: 58 RKDYDFVKSSLSAKGFDVVYDI-----NGREADEVE---PILDA--LPNLEQFIYCSSAG 107
+ D ++ +L G + + + + EV+ + D L +Y
Sbjct: 60 QDDQVIMELAL--NGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLEN 117
Query: 108 VYLKSD---LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
+ + H + GK E GV TS+R + N +
Sbjct: 118 IKKLTAGRLAAAHFD-----------GKGEVEEYFRDIGVPMTSVRLPCYF----ENLLS 162
Query: 165 EWFFHRLKAGR----PIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEK 219
+ + G+ +P + V DL + +L EK Q +S
Sbjct: 163 HFLPQKAPDGKSYLLSLPTGDVPM---DGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTC- 218
Query: 220 YVTFDGLARACAKVTG 235
T + A K T
Sbjct: 219 RHTAEEYAALLTKHTR 234
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 3e-09
Identities = 46/272 (16%), Positives = 85/272 (31%), Gaps = 54/272 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G FI ++R L EGH V + + + + EF D +
Sbjct: 36 GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF---CDEF---------HLVDLRV 83
Query: 61 YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
+ +G D V+ D+ G + + N ++F
Sbjct: 84 MENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF 141
Query: 102 YCSSAGVYLKSDLLPHCETDT-------VDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
Y SSA +Y + L +P+ KL TE + + G+
Sbjct: 142 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 201
Query: 150 RPVYIYGP-LNYNPVEEW----FFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
R IYGP + E F + + + G G+Q + + +++
Sbjct: 202 RFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261
Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
+ R+ NI ++ V+ + +A
Sbjct: 262 --KSDFREPVNIGSDEMVSMNEMAEMVLSFEE 291
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 5e-09
Identities = 39/282 (13%), Positives = 70/282 (24%), Gaps = 67/282 (23%)
Query: 2 GGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL 54
G +G L++ LVK+G + TL + G +
Sbjct: 21 GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-----VDA------R 69
Query: 55 KGDRKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLE------------- 98
D + L DV++ I EA E++ NL+
Sbjct: 70 AADLSAPGEAEK-LVEARPDVIFHLAAIVSGEA-ELDFDKGYRINLDGTRYLFDAIRIAN 127
Query: 99 -------QFIYCSSAGVYLKSDLLPHCETDTVDPKS---RHKGKLNTESVLES----KGV 144
+ ++ SS V+ P + P + K E +L
Sbjct: 128 GKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQK--AICELLLSDYSRRGFF 185
Query: 145 NWTSLRPVYIYGPL--------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
+ +R I + G+ +P +
Sbjct: 186 DGIGIRLPTICIRPGKPNAAASGFFSN---ILREPLVGQEAVLPVPESIRHWHASPRSAV 242
Query: 197 RAFVQVL---GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
+ + R+ ++ G T A KV G
Sbjct: 243 GFLIHGAMIDVEKVGPRRNLSMPGLSA-TVGEQIEALRKVAG 283
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 5e-09
Identities = 44/273 (16%), Positives = 73/273 (26%), Gaps = 62/273 (22%)
Query: 2 GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
GG FIG + + L +G + + G + + K D
Sbjct: 53 GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 102
Query: 58 RKDYDFVKSSLSAKGFDVVY------DINGREADEVEPILDALPNLE------------- 98
+ ++ E D + ++D N +
Sbjct: 103 FLIQIMAGEEF--GDVEAIFHEGACSST--TEWDG-KYMMDN--NYQYSKELLHYCLERE 155
Query: 99 -QFIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPV 152
F+Y SSA Y + P S+ +L R
Sbjct: 156 IPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYF 215
Query: 153 YIYGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQ----VTQLGHVKDLARAFVQV 202
+YGP + V +L G P GS V +V D+A +
Sbjct: 216 NVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV----YVGDVADVNLWF 271
Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
L E +FN+ + +F +A A
Sbjct: 272 L--ENGVSGIFNLGTGRAESFQAVADATLAYHK 302
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-08
Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 32/218 (14%)
Query: 2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
G + G L + ++++G +VTL R K ++ +QE +F K+ +
Sbjct: 25 GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE-KLDDYASAFQ 83
Query: 60 DYDFV-------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYLK 111
+D + A+GF V D + A+ + + F SS G
Sbjct: 84 GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS 138
Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL 171
S+ L + KG++ V E K ++ RP + + EW +
Sbjct: 139 SNFLY----------LQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF 187
Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
+P + V + RA + + +
Sbjct: 188 --FGSLPDSWASGHSV---PVVTVVRAMLNNVVRPRDK 220
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 1e-08
Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 33/186 (17%)
Query: 60 DYDFVKSSLSA-KGFDVVYDIN----GREADEVEPILDALPNLEQFIYCSSAGV----YL 110
DY + SA +G + + I+ G+ A + +++A +AGV Y
Sbjct: 52 DYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINA---------AKAAGVKFIAYT 102
Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
S L H +T + H TE +L G+ +T LR + Y+
Sbjct: 103 -S--LLHADTSPLGLADEHIE---TEKMLADSGIVYTLLRNGW------YSENYLASAPA 150
Query: 171 LKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
G G D A A +V+ +V+ ++G+ T LA
Sbjct: 151 ALEHGVFIGAAGDG--KIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAE 208
Query: 230 CAKVTG 235
K +G
Sbjct: 209 LTKQSG 214
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-08
Identities = 41/230 (17%), Positives = 63/230 (27%), Gaps = 56/230 (24%)
Query: 2 GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
G T G L ++ E +V R +L
Sbjct: 12 GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQL-------DG 64
Query: 60 DYDFV--------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYL 110
D K + S + F V +D+ ++ S+ G
Sbjct: 65 SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK-----RALEMGARHYLVVSALGA-- 117
Query: 111 KSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
D KS R KG+L +++ E T RP ++GP E
Sbjct: 118 -------------DAKSSIFYNRVKGELE-QALQEQGWPQLTIARPSLLFGP------RE 157
Query: 166 WFFHRLKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
F PI +PG + DLARA ++ E +
Sbjct: 158 EFRLAEILAAPIARILPGKYHGI----EACDLARALWRLALEEGKGVRFV 203
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 2e-06
Identities = 42/249 (16%), Positives = 69/249 (27%), Gaps = 53/249 (21%)
Query: 2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK---ILHLKGD 57
G F+G L L H + R ++E K I+HL G
Sbjct: 7 GAKGFVGKNLKADLTSTTDHHIFEVHRQ----------TKEEELESALLKADFIVHLAGV 56
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLL 115
+ N ++ +LD L + I SS+
Sbjct: 57 N----------RPEHDKEFSLGN---VSYLDHVLDILTRNTKKPAILLSSSIQA------ 97
Query: 116 PHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP---LNYNPVEEWF 167
+ + + KL E +L E G R ++G NYN V F
Sbjct: 98 --------TQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATF 149
Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-GNEKASRQVFNISGEKYVTFDGL 226
+++ I + L +V D+ + + G V + VT +
Sbjct: 150 CYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI 208
Query: 227 ARACAKVTG 235
K
Sbjct: 209 VDLLYKFKQ 217
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 8e-06
Identities = 30/212 (14%), Positives = 51/212 (24%), Gaps = 46/212 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G +G + L H+V L + + + E + D D
Sbjct: 9 GAAGGVGSAIRPHLGTLAHEVRLSDI--------VDLGAAEAHEEI------VACDLADA 54
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPN--------LE--------QFIYCS 104
V + K D + + VE P D L E + ++ S
Sbjct: 55 QAVHDLV--KDCDGIIHL---GGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109
Query: 105 SAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP- 157
S P S + K E + + ++R +
Sbjct: 110 SNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP 169
Query: 158 LNYNPVEEW---FFHRLKAGRPIPIPGSGIQV 186
+ + W R P G V
Sbjct: 170 KDARMMATWLSVDDFMRLMKRAFVAPKLGCTV 201
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 4e-05
Identities = 29/239 (12%), Positives = 54/239 (22%), Gaps = 62/239 (25%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G +G + L + L P + E ++ D D
Sbjct: 10 GAAGQLGRVMRERLAPMAEILRLADLS--------PLDPAGPNEEC------VQCDLADA 55
Query: 62 DFVKSSLSAKGFDVVY-----DINGREADEVEP-------ILDA--LPNLEQFIYCSSAG 107
+ V + + G D + + ++ + +A + ++ SS
Sbjct: 56 NAVNAMV--AGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113
Query: 108 VY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVL----ESKGVNWTSLRPVYIYG-PLN 159
P + G K E++ + G +R P N
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLY-GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN 172
Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
Y + WF H D V V +
Sbjct: 173 YRMLSTWFSHD-----------------------DFVSLIEAVFRAPVLGCPVVWGASA 208
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 7e-05
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 154 IYGPLNYNPVEE----WFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204
+YG + ++ WF + +P I G+G QV + H +D+ + L
Sbjct: 195 MYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALA 254
Query: 205 NEKASR-QVFNISG 217
N R FNI G
Sbjct: 255 NVSKIRGNAFNIGG 268
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 2e-04
Identities = 60/339 (17%), Positives = 105/339 (30%), Gaps = 109/339 (32%)
Query: 15 LVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---- 66
++ V+ LF E Q+F E + R +Y F+ S
Sbjct: 54 IIMSKDAVSGTLRLFW-----TLLSKQEEMVQKFVE--------EVLRINYKFLMSPIKT 100
Query: 67 -----SLSAKGF----DVVYDIN--------GREADEVEPILDALPNLEQFIYCSSAGVY 109
S+ + + D +Y+ N R + AL L + V
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL-QPYLKLRQALLELR-----PAKNVL 154
Query: 110 L-------KSDL-LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL----RPVYIYGP 157
+ K+ + L C + V K + W +L P +
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKM-------------DFKIFWLNLKNCNSPETVLEM 201
Query: 158 LN--YNPVEEWFFHRLKAGRPIPIPGSGIQ--VTQLGHVKDLARAFVQVLGNEKASR--Q 211
L ++ + R I + IQ + +L K + VL N + ++
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL-VLLNVQNAKAWN 260
Query: 212 VFNI-------SGEKYVTFDGLARACAKVTGLLDFRSLNLCTTTPKSLTLVKRRLFHSGT 264
FN+ + K VT A ++ LD S+ L T + +L+ + L
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHIS--LDHHSMTL--TPDEVKSLLLKYL----- 311
Query: 265 SISLRQLRRQSMCSDGN---LSL----------TW--WK 288
+ L R+ + + N LS+ TW WK
Sbjct: 312 DCRPQDLPRE-VLT-TNPRRLSIIAESIRDGLATWDNWK 348
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 295 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.98 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.98 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.98 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.97 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.97 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.97 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.97 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.97 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.97 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.97 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.97 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.97 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.97 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.97 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.96 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.96 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.96 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.96 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.96 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.96 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.96 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.96 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.95 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.95 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.95 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.95 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.95 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.95 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.95 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.95 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.95 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.94 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.94 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.94 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.94 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.92 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.92 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.91 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.85 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.84 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.84 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.83 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.83 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.8 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.8 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.8 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.79 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.79 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.79 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.79 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.79 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.78 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.78 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.77 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.77 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.77 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.77 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.77 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.77 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.77 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.76 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.76 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.76 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.76 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.76 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.76 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.76 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.76 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.76 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.75 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.75 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.75 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.75 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.75 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.75 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.75 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.74 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.74 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.74 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.74 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.74 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.74 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.74 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.74 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.74 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.74 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.74 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.74 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.74 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.73 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.73 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.73 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.73 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.73 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.73 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.73 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.73 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.73 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.73 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.73 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.73 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.73 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.73 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.72 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.72 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.72 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.72 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.72 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.72 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.72 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.72 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.72 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.72 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.72 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.72 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.72 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.72 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.72 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.71 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.71 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.71 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.71 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.71 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.71 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.71 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.71 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.71 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.71 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.71 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.7 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.7 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.7 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.7 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.7 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.7 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.7 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.7 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.7 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.7 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.7 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.7 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.7 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.7 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.7 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.7 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.7 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.7 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.69 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.69 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.69 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.69 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.69 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.69 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.69 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.69 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.69 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.69 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.69 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.69 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.69 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.69 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.69 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.68 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.68 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.68 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.68 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.68 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.68 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.68 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.68 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.68 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.68 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.68 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.68 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.67 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.67 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.67 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.66 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.66 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.66 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.66 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.66 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.66 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.66 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.66 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.65 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.65 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.65 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.65 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.65 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.65 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.64 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.64 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.64 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.64 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.64 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.64 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.63 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.63 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.63 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.63 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.63 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.63 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.62 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.62 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.62 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.62 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.62 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.62 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.62 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.62 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.62 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.61 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.61 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.6 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.59 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.59 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.59 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.58 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.57 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.57 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.57 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.56 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.56 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.56 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.56 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.55 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.54 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.54 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.54 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.52 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.52 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.52 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.51 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.5 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.5 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.5 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.49 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.48 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.46 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.44 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.43 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.38 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.35 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.35 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.34 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.28 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.25 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.17 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.09 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.09 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.05 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.01 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.89 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.84 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.84 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.82 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.79 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.73 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.7 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.7 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.59 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.52 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.32 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.28 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.2 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.15 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.09 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.03 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.98 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.96 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.87 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 97.8 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.75 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.73 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.67 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.64 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.63 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.58 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.58 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.48 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.37 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.34 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.31 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.2 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.19 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.16 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.03 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 96.94 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 96.93 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 96.81 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 96.79 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.77 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.76 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 96.76 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 96.71 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.67 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 96.67 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 96.67 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.65 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 96.52 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 96.51 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 96.45 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.4 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 96.37 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.36 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 96.35 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.34 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.31 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 96.3 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 96.13 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 96.12 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.01 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.98 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 95.97 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 95.97 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 95.93 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 95.88 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 95.74 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 95.65 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 95.65 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 95.65 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 95.62 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 95.56 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 95.54 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 95.48 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 95.45 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 95.45 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 95.39 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 95.38 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 95.32 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 95.28 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 95.26 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 95.23 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 95.21 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 95.19 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 95.17 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 95.15 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.1 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 95.09 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 95.08 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 95.07 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 95.04 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 95.02 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 94.97 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 94.95 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 94.93 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 94.92 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 94.92 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 94.91 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 94.88 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 94.78 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 94.72 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 94.71 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 94.67 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 94.66 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 94.61 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 94.55 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 94.49 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 94.47 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 94.46 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 94.44 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 94.44 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 94.43 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 94.42 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 94.39 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 94.37 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 94.35 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 94.33 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 94.33 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 94.28 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 94.25 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 94.23 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 94.22 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 94.2 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 94.04 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 94.03 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 93.99 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 93.93 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 93.92 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 93.9 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 93.87 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 93.83 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 93.79 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 93.73 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 93.67 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 93.67 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 93.66 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 93.65 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 93.61 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 93.56 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 93.56 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 93.55 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 93.55 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 93.54 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 93.53 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 93.51 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 93.49 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 93.46 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 93.42 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 93.42 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 93.41 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 93.33 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 93.3 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 93.25 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 93.24 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 93.24 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 93.24 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 93.23 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 93.21 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 93.18 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 93.08 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 93.08 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 93.08 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 93.07 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 93.07 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 92.99 | |
| 3oet_A | 381 | Erythronate-4-phosphate dehydrogenase; structural | 92.98 | |
| 1sc6_A | 404 | PGDH, D-3-phosphoglycerate dehydrogenase; alloster | 92.98 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 92.94 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 92.94 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 92.94 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 92.94 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 92.92 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 92.9 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 92.89 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 92.87 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 92.83 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 92.8 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 92.79 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 92.76 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 92.76 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 92.76 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 92.74 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 92.73 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 92.57 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 92.57 | |
| 3k5p_A | 416 | D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, | 92.55 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 92.52 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 92.5 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 92.49 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 92.48 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 92.45 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 92.43 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 92.4 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 92.39 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 92.38 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 92.36 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=260.97 Aligned_cols=219 Identities=21% Similarity=0.289 Sum_probs=194.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|++++|++.. .. + .+++++.+|++ .+++.++++ ++|+|||+|
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~------------~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a 70 (311)
T 3m2p_A 8 TGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-I------------NDYEYRVSDYT-LEDLINQLN--DVDAVVHLA 70 (311)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCC-HHHHHHHTT--TCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-C------------CceEEEEcccc-HHHHHHhhc--CCCEEEEcc
Confidence 7999999999999999999999999999433 21 1 37999999999 999999999 999999999
Q ss_pred cC------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhh----
Q 022578 81 GR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES---- 141 (295)
Q Consensus 81 ~~------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~---- 141 (295)
+. |..++.+++++++ ++++|||+||.++|+.....+++|+++..|.+.| .+|..+|++++.
T Consensus 71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 150 (311)
T 3m2p_A 71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK 150 (311)
T ss_dssp CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 86 3557899999988 8889999999999998887899999998888766 999999999864
Q ss_pred cCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcc
Q 022578 142 KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY 220 (295)
Q Consensus 142 ~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~ 220 (295)
.+++++++||+.+|||+... .++..++..+..++++.++++++..++++|++|+|++++.+++++. .+++||+++++.
T Consensus 151 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~ 229 (311)
T 3m2p_A 151 KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDA 229 (311)
T ss_dssp SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCE
T ss_pred cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCc
Confidence 79999999999999998753 5778888888899998888899999999999999999999998875 678999999999
Q ss_pred cCHHHHHHHHHHHhCCC
Q 022578 221 VTFDGLARACAKVTGLL 237 (295)
Q Consensus 221 ~t~~e~~~~i~~~~g~~ 237 (295)
+|+.|+++.+++.+|.+
T Consensus 230 ~s~~e~~~~i~~~~g~~ 246 (311)
T 3m2p_A 230 LTNYEVANTINNAFGNK 246 (311)
T ss_dssp ECHHHHHHHHHHHTTCT
T ss_pred ccHHHHHHHHHHHhCCC
Confidence 99999999999999987
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=263.65 Aligned_cols=230 Identities=20% Similarity=0.227 Sum_probs=198.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-----ccCCeEEEEecCCChHHHHHhhhcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~~~~~~~~~d~ 75 (295)
||||||||++|+++|+++|++|++++|.+........ .+.. ...+++++.+|++|++++.++++ ++|+
T Consensus 31 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 103 (351)
T 3ruf_A 31 TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLD-----EVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVDH 103 (351)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHH-----HHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCSE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhh-----hhhhccccccCCceEEEEccCCCHHHHHHHhc--CCCE
Confidence 7999999999999999999999999998765221110 0000 01589999999999999999999 9999
Q ss_pred EEEcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHH
Q 022578 76 VYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE 136 (295)
Q Consensus 76 vi~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E 136 (295)
|||+|+. |+.++.+++++|. ++++|||+||.++|+.....+++|+++..|.+.| .+|..+|
T Consensus 104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E 183 (351)
T 3ruf_A 104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE 183 (351)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHH
Confidence 9999985 4567889999987 8889999999999999888899999998888766 9999999
Q ss_pred HHhh----hcCCcEEEeccCeeecCCCCC-----chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC-C
Q 022578 137 SVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-E 206 (295)
Q Consensus 137 ~~~~----~~~~~~~i~R~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~-~ 206 (295)
++++ +.+++++++||+.+|||+... .++..++..+..+.++.+++++++.++++|++|+|++++.++.+ +
T Consensus 184 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~ 263 (351)
T 3ruf_A 184 IYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKD 263 (351)
T ss_dssp HHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc
Confidence 9875 469999999999999998632 46778888888999888889999999999999999999999987 3
Q ss_pred CCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 207 KASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 207 ~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
...+++||+++++.+|+.|+++.+++.+|.+
T Consensus 264 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 294 (351)
T 3ruf_A 264 SAKDNIYNVAVGDRTTLNELSGYIYDELNLI 294 (351)
T ss_dssp GGCSEEEEESCSCCEEHHHHHHHHHHHHHTT
T ss_pred ccCCCEEEeCCCCcccHHHHHHHHHHHhCcc
Confidence 4568899999999999999999999999984
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=261.74 Aligned_cols=230 Identities=17% Similarity=0.249 Sum_probs=196.2
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
||||||||++|+++|+++| ++|++++|...... ..+.. .....+++++.+|++|++.+.++++..++|+||
T Consensus 30 tGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 103 (346)
T 4egb_A 30 TGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKS------IQDHPNYYFVKGEIQNGELLEHVIKERDVQVIV 103 (346)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTT------TTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEE
T ss_pred ECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhh------hccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEE
Confidence 7999999999999999999 78888887753311 11110 011258999999999999999999954599999
Q ss_pred EcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCC-CCCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 78 DINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 78 ~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
|+|+. |+.++.+++++|. ++++|||+||.++|+.. ...+++|+++..|.+.| .+|..+|+
T Consensus 104 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 183 (346)
T 4egb_A 104 NFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADM 183 (346)
T ss_dssp ECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred ECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHH
Confidence 99985 3456899999988 88899999999999986 56789999998888766 99999999
Q ss_pred Hhhh----cCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCce
Q 022578 138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212 (295)
Q Consensus 138 ~~~~----~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ 212 (295)
+++. .+++++++||+.+|||+.. ..++..++..+..++++.++++++..++++|++|+|++++.++.++. .+++
T Consensus 184 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~ 262 (346)
T 4egb_A 184 IALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-VGEV 262 (346)
T ss_dssp HHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred HHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCCE
Confidence 8854 6999999999999999874 45678888889999988888899999999999999999999998765 6789
Q ss_pred EEecCCcccCHHHHHHHHHHHhCCC
Q 022578 213 FNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 213 ~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
||+++++.+|+.|+++.+++.+|.+
T Consensus 263 ~~i~~~~~~s~~e~~~~i~~~~g~~ 287 (346)
T 4egb_A 263 YNIGGNNEKTNVEVVEQIITLLGKT 287 (346)
T ss_dssp EEECCSCCEEHHHHHHHHHHHHTCC
T ss_pred EEECCCCceeHHHHHHHHHHHhCCC
Confidence 9999999999999999999999987
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=264.56 Aligned_cols=224 Identities=19% Similarity=0.284 Sum_probs=194.5
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCC-ChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++|+++|+++ |++|++++|++........ ..+++++.+|++ |.+.+.++++ ++|+|||
T Consensus 30 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih 97 (372)
T 3slg_A 30 LGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----------HERMHFFEGDITINKEWVEYHVK--KCDVILP 97 (372)
T ss_dssp ESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----------STTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred ECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----------CCCeEEEeCccCCCHHHHHHHhc--cCCEEEE
Confidence 799999999999999998 9999999998766332211 258999999999 9999999999 9999999
Q ss_pred cccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCC-------CCCccc-hhh
Q 022578 79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK 132 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~p~~~~-~~k 132 (295)
+|+. |+.++.+++++|+ + ++|||+||.++||.....+++|++.. .|.+.| .+|
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK 176 (372)
T 3slg_A 98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK 176 (372)
T ss_dssp CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence 9985 3467889999998 7 99999999999998877788887754 455445 999
Q ss_pred HHHHHHhhhc---CCcEEEeccCeeecCCCC---------CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 133 LNTESVLESK---GVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 133 ~~~E~~~~~~---~~~~~i~R~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|++++.. +++++++||+.+|||+.. ..++..++..+..++++.+++++++.++++|++|+|++++
T Consensus 177 ~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~ 256 (372)
T 3slg_A 177 QLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM 256 (372)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence 9999999765 999999999999999853 3467788888889999888888899999999999999999
Q ss_pred HHhcCCC--CCCceEEecCC-cccCHHHHHHHHHHHhCCC
Q 022578 201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~-~~~t~~e~~~~i~~~~g~~ 237 (295)
.++.++. ..+++||++++ +.+|+.|+++.+++.+|.+
T Consensus 257 ~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~ 296 (372)
T 3slg_A 257 KIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF 296 (372)
T ss_dssp HHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHC
T ss_pred HHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCC
Confidence 9998865 56889999994 8999999999999999976
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=257.10 Aligned_cols=222 Identities=23% Similarity=0.291 Sum_probs=190.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|.+....... ..+++++.+|+.|.+ +.++++ + |+|||+|
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A 70 (312)
T 3ko8_A 6 TGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----------NPSAELHVRDLKDYS-WGAGIK--G-DVVFHFA 70 (312)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----------CTTSEEECCCTTSTT-TTTTCC--C-SEEEECC
T ss_pred ECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----------CCCceEEECccccHH-HHhhcC--C-CEEEECC
Confidence 799999999999999999999999999877643322 257999999999998 888887 5 9999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhh
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~ 141 (295)
+. |+.++.+++++++ ++++|||+||.++|+.....+++|+.+..|.+.| .+|..+|++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~ 150 (312)
T 3ko8_A 71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCAT 150 (312)
T ss_dssp SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 84 4557889999987 8889999999999999888899999988888766 999999998753
Q ss_pred ----cCCcEEEeccCeeecCCCCCchHHHHHHHHHcC-CCcccCCCCCceeeeeeHHHHHHHHHHHhcC---CCCCCceE
Q 022578 142 ----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVF 213 (295)
Q Consensus 142 ----~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~---~~~~~~~~ 213 (295)
.+++++++||+++|||+.....+..++..+..+ .++.+++++++.++++|++|+|++++.++.+ +...+++|
T Consensus 151 ~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ 230 (312)
T 3ko8_A 151 YARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL 230 (312)
T ss_dssp HHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence 599999999999999987666677777777766 4566778899999999999999999999987 44567899
Q ss_pred EecCCcccCHHHHHHHHHHHhCCC
Q 022578 214 NISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 214 ~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|+++++.+|+.|+++.+.+.+|.+
T Consensus 231 ni~~~~~~s~~e~~~~i~~~~g~~ 254 (312)
T 3ko8_A 231 NVGNVDAVRVLDIAQIVAEVLGLR 254 (312)
T ss_dssp EESCSSCEEHHHHHHHHHHHHTCC
T ss_pred EEcCCCceeHHHHHHHHHHHhCCC
Confidence 999999999999999999999987
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=259.69 Aligned_cols=218 Identities=21% Similarity=0.300 Sum_probs=194.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|++++|.+.. .+++++.+|++|.+++.++++ ++|+|||+|
T Consensus 25 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A 85 (347)
T 4id9_A 25 TGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDAIM--GVSAVLHLG 85 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHHHh--CCCEEEECC
Confidence 7999999999999999999999999998765 468899999999999999999 999999999
Q ss_pred cC--------------ChhcHHHHHHhCC--CCCcEEEeeccccccC--CCCCCCCCCCCCCCCccc-hhhHHHHHHhh-
Q 022578 81 GR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (295)
Q Consensus 81 ~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~--~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~- 140 (295)
+. |+.++.+++++|. ++++|||+||.++|+. ....+++|+.+..|.+.| .+|..+|++++
T Consensus 86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 165 (347)
T 4id9_A 86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRF 165 (347)
T ss_dssp CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 86 3457899999987 8889999999999998 566789999988887766 99999999885
Q ss_pred ---hcCCcEEEeccCeee-------------cCCCC------------CchHHHHHHHHHcCCCcccCCCCCceeee---
Q 022578 141 ---SKGVNWTSLRPVYIY-------------GPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL--- 189 (295)
Q Consensus 141 ---~~~~~~~i~R~~~i~-------------g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 189 (295)
+.+++++++||+.+| ||+.. ..++..++..+..++++.++++++..+++
T Consensus 166 ~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 245 (347)
T 4id9_A 166 HQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMH 245 (347)
T ss_dssp HHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEEC
T ss_pred HHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccC
Confidence 468999999999999 87632 35566777888888888778888888999
Q ss_pred -eeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 190 -GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 190 -i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+|++|+|++++.++.++...+++||+++++.+|+.|+++.+++.+|.+
T Consensus 246 ~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 294 (347)
T 4id9_A 246 ITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLP 294 (347)
T ss_dssp EEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCC
T ss_pred cEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCC
Confidence 999999999999999875668899999999999999999999999987
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=249.81 Aligned_cols=221 Identities=21% Similarity=0.284 Sum_probs=188.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++| .++++++......... ..+++++.+|+++ +++.++++ ++|+|||+|
T Consensus 7 TGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a 71 (313)
T 3ehe_A 7 TGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----------NEAARLVKADLAA-DDIKDYLK--GAEEVWHIA 71 (313)
T ss_dssp ETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----------CTTEEEECCCTTT-SCCHHHHT--TCSEEEECC
T ss_pred ECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----------CCCcEEEECcCCh-HHHHHHhc--CCCEEEECC
Confidence 7999999999999999999 5555555444322222 2579999999999 89999999 999999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh-
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~- 140 (295)
+. |+.++.++++++. ++++|||+||.++||.....+++|+.+..|.+.| .+|..+|.+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 151 (313)
T 3ehe_A 72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIES 151 (313)
T ss_dssp CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 84 4557889999987 8889999999999999888899999888887766 99999999884
Q ss_pred ---hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcC-CCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEec
Q 022578 141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216 (295)
Q Consensus 141 ---~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~ 216 (295)
+.+++++++||+.+|||+.....+..++..+..+ .++.+++++++.++++|++|+|++++.++.. ...+++||++
T Consensus 152 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~ni~ 230 (313)
T 3ehe_A 152 YCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG-DERVNIFNIG 230 (313)
T ss_dssp HHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC-CSSEEEEECC
T ss_pred HHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc-CCCCceEEEC
Confidence 4699999999999999987666677777777666 5566788999999999999999999999984 3457899999
Q ss_pred CCcccCHHHHHHHHHHHhCCC
Q 022578 217 GEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 217 ~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++.+|+.|+++.+++.+|.+
T Consensus 231 ~~~~~s~~e~~~~i~~~~g~~ 251 (313)
T 3ehe_A 231 SEDQIKVKRIAEIVCEELGLS 251 (313)
T ss_dssp CSCCEEHHHHHHHHHHHTTCC
T ss_pred CCCCeeHHHHHHHHHHHhCCC
Confidence 999999999999999999987
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=256.19 Aligned_cols=232 Identities=19% Similarity=0.224 Sum_probs=189.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++|++|++++|+........ ..+.. ...+++++.+|++|++++.++++..++|+|||+
T Consensus 11 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 85 (341)
T 3enk_A 11 TGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAI-----ARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF 85 (341)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHH-----HHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred ecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHH-----HHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence 799999999999999999999999999876632111 01111 135789999999999999999987789999999
Q ss_pred ccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh
Q 022578 80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE 140 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~ 140 (295)
|+. |..++.+++++++ ++++|||+||.++||.....+++|+.+..|.+.| .+|..+|++++
T Consensus 86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~ 165 (341)
T 3enk_A 86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILR 165 (341)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHH
T ss_pred ccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 986 3456888999987 7789999999999998888889999988887766 99999999885
Q ss_pred h----c-CCcEEEeccCeeecCCCC-----------CchHHHHHHHHHcC-CCcccCC------CCCceeeeeeHHHHHH
Q 022578 141 S----K-GVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLAR 197 (295)
Q Consensus 141 ~----~-~~~~~i~R~~~i~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a~ 197 (295)
. . +++++++||+++|||+.. ..+...+....... .++.++| ++++.++++|++|+|+
T Consensus 166 ~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~ 245 (341)
T 3enk_A 166 DVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLAR 245 (341)
T ss_dssp HHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred HHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHH
Confidence 4 3 499999999999999541 33444444433322 3455555 7889999999999999
Q ss_pred HHHHHhcC--CCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 198 AFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 198 ~i~~~~~~--~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++.++.+ +...+++||+++++.+|+.|+++.+++.+|.+
T Consensus 246 a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 287 (341)
T 3enk_A 246 GHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRA 287 (341)
T ss_dssp HHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSC
T ss_pred HHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 99999876 23457899999999999999999999999987
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=248.33 Aligned_cols=234 Identities=21% Similarity=0.215 Sum_probs=192.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++|++|++++|.+......+.. ....+.. ...+++++.+|++|.+++.++++ ++|+|||+
T Consensus 33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~ 109 (352)
T 1sb8_A 33 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDE-VRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQ 109 (352)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHH-HHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEEC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHH-HhhhcccccCCceEEEECCCCCHHHHHHHhc--CCCEEEEC
Confidence 79999999999999999999999999986531110000 0000000 02579999999999999999999 99999999
Q ss_pred ccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh
Q 022578 80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE 140 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~ 140 (295)
|+. |..++.++++++. ++++|||+||.++|+.....+++|+++..|.+.| .+|..+|.+++
T Consensus 110 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~ 189 (352)
T 1sb8_A 110 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYAD 189 (352)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHH
T ss_pred CcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 985 3456889999987 7889999999999998777788999988887766 99999999884
Q ss_pred ----hcCCcEEEeccCeeecCCCCC-----chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC-CCCC
Q 022578 141 ----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-KASR 210 (295)
Q Consensus 141 ----~~~~~~~i~R~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~-~~~~ 210 (295)
+.+++++++||+.+|||+... .++..++..+..+.++.+++++++.+++++++|+|++++.++.+. ...+
T Consensus 190 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~ 269 (352)
T 1sb8_A 190 VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARN 269 (352)
T ss_dssp HHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCS
T ss_pred HHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCC
Confidence 358999999999999997632 456667777888888777788899999999999999999988763 3467
Q ss_pred ceEEecCCcccCHHHHHHHHHHHh---CCC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVT---GLL 237 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~---g~~ 237 (295)
++||+++++.+|+.|+++.+++.+ |.+
T Consensus 270 ~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~ 299 (352)
T 1sb8_A 270 QVYNIAVGGRTSLNQLFFALRDGLAENGVS 299 (352)
T ss_dssp EEEEESCSCCEEHHHHHHHHHHHHHHTTCC
T ss_pred ceEEeCCCCCccHHHHHHHHHHHHHhcCCC
Confidence 899999999999999999999999 887
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=249.91 Aligned_cols=230 Identities=18% Similarity=0.201 Sum_probs=190.5
Q ss_pred CCcCCcchHHHHHHHHH--CCCeEEEEecCCCccccC--CCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVK--EGHQVTLFTRGKAPIAQQ--LPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~ 75 (295)
|||+||||++++++|++ .|++|++++|.+...... ..............+++++.+|++|++++..+ .. ++|+
T Consensus 16 TGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~D~ 93 (362)
T 3sxp_A 16 TGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL--HFDY 93 (362)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS--CCSE
T ss_pred ECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc--CCCE
Confidence 79999999999999999 899999999977621000 00000000011124689999999999999998 65 9999
Q ss_pred EEEcccC--------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHH
Q 022578 76 VYDINGR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (295)
Q Consensus 76 vi~~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~ 138 (295)
|||+|+. |+.++.+++++++ +++ |||+||.++||.... +++|+++..|.+.| .+|..+|++
T Consensus 94 vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~E~~ 171 (362)
T 3sxp_A 94 LFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEF 171 (362)
T ss_dssp EEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred EEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHH
Confidence 9999985 4567899999988 554 999999999998766 89999998888866 999999999
Q ss_pred hhhcC--CcEEEeccCeeecCCCCC-----chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCc
Q 022578 139 LESKG--VNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211 (295)
Q Consensus 139 ~~~~~--~~~~i~R~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~ 211 (295)
++... ++++++||+++|||+... ..+..++..+..+.++.+++++++.++++|++|+|++++.++.++. .|
T Consensus 172 ~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-~g- 249 (362)
T 3sxp_A 172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-SG- 249 (362)
T ss_dssp HHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-CE-
T ss_pred HHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-CC-
Confidence 97655 889999999999998632 5677788888889888888888999999999999999999998764 45
Q ss_pred eEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 212 VFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 212 ~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+||+++++.+|+.|+++.+++.+| +
T Consensus 250 ~~~i~~~~~~s~~e~~~~i~~~~g-~ 274 (362)
T 3sxp_A 250 VYNVGYSQARSYNEIVSILKEHLG-D 274 (362)
T ss_dssp EEEESCSCEEEHHHHHHHHHHHHC-C
T ss_pred EEEeCCCCCccHHHHHHHHHHHcC-C
Confidence 999999999999999999999999 5
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=245.37 Aligned_cols=221 Identities=17% Similarity=0.185 Sum_probs=188.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|++.. .. .+++++.+|++|++++.++++..++|+|||+|
T Consensus 18 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 82 (321)
T 2pk3_A 18 TGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------PNVEMISLDIMDSQRVKKVISDIKPDYIFHLA 82 (321)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 7999999999999999999999999998765 11 16889999999999999999844599999999
Q ss_pred cC----------------ChhcHHHHHHhCC---CCCcEEEeeccccccCC--CCCCCCCCCCCCCCccc-hhhHHHHHH
Q 022578 81 GR----------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-KGKLNTESV 138 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~--~~~~~~e~~~~~p~~~~-~~k~~~E~~ 138 (295)
+. |+.++.+++++++ ++++|||+||.++|+.. ...+++|+++..|.+.| .+|+.+|.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 162 (321)
T 2pk3_A 83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGML 162 (321)
T ss_dssp SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHH
T ss_pred cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 86 3346888999986 48899999999999876 66788999888777665 999999998
Q ss_pred hhh----cCCcEEEeccCeeecCCCCC-chHHHHHHHHHc---C--CCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 022578 139 LES----KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKA---G--RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 139 ~~~----~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
++. .+++++++||+++|||+... ..+..++..+.. | .++..+++++..+++++++|+|++++.++.++ .
T Consensus 163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~ 241 (321)
T 2pk3_A 163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG-K 241 (321)
T ss_dssp HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC-C
T ss_pred HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC-C
Confidence 854 38999999999999998753 345566666655 7 56666688888999999999999999999875 4
Q ss_pred CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 209 SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 209 ~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 242 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 270 (321)
T 2pk3_A 242 TGDVYNVCSGIGTRIQDVLDLLLAMANVK 270 (321)
T ss_dssp TTCEEEESCSCEEEHHHHHHHHHHHSSSC
T ss_pred CCCeEEeCCCCCeeHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999986
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=242.78 Aligned_cols=209 Identities=21% Similarity=0.199 Sum_probs=183.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCC-CcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~-~d~vi~~ 79 (295)
|| +||||++|+++|+++|++|++++|+++... .+++++.+|++|++++.++++ + +|+|||+
T Consensus 9 tG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~~~~~~~~Dl~d~~~~~~~~~--~~~d~vih~ 70 (286)
T 3gpi_A 9 AG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP---------------AGVQTLIADVTRPDTLASIVH--LRPEILVYC 70 (286)
T ss_dssp EC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC---------------TTCCEEECCTTCGGGCTTGGG--GCCSEEEEC
T ss_pred EC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cCCceEEccCCChHHHHHhhc--CCCCEEEEe
Confidence 68 599999999999999999999999876621 578999999999999999998 5 9999999
Q ss_pred ccC-----------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhhcCCc
Q 022578 80 NGR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVN 145 (295)
Q Consensus 80 a~~-----------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~~ 145 (295)
|+. |..++.+++++|+ ++++|||+||.++||...+.+++|+.+..|.+.| .+|..+|++ ++. ++
T Consensus 71 a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~ 148 (286)
T 3gpi_A 71 VAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YS 148 (286)
T ss_dssp HHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CC
Confidence 875 6778999999998 7889999999999999888889999999888776 999999999 777 99
Q ss_pred EEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcccCH
Q 022578 146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVTF 223 (295)
Q Consensus 146 ~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~t~ 223 (295)
++++||+++|||+.. .++..+.. + ..+++++..++++|++|+|++++.++.++ ...+++||+++++.+|+
T Consensus 149 ~~ilR~~~v~G~~~~-----~~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 220 (286)
T 3gpi_A 149 STILRFSGIYGPGRL-----RMIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPV 220 (286)
T ss_dssp EEEEEECEEEBTTBC-----HHHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEH
T ss_pred eEEEecccccCCCch-----hHHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCH
Confidence 999999999999753 23444444 2 23477889999999999999999999874 45678999999999999
Q ss_pred HHHHHHHHHHhCCC
Q 022578 224 DGLARACAKVTGLL 237 (295)
Q Consensus 224 ~e~~~~i~~~~g~~ 237 (295)
.|+++.+++.+|.+
T Consensus 221 ~e~~~~i~~~~g~~ 234 (286)
T 3gpi_A 221 HDLLRWLADRQGIA 234 (286)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999999987
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=249.89 Aligned_cols=224 Identities=19% Similarity=0.257 Sum_probs=180.8
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++| ++|++++|.+......+. ...+++++.+|++|++++.++++ ++|+|||+
T Consensus 38 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---------~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~ 106 (377)
T 2q1s_A 38 VGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---------DHPAVRFSETSITDDALLASLQD--EYDYVFHL 106 (377)
T ss_dssp ETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---------CCTTEEEECSCTTCHHHHHHCCS--CCSEEEEC
T ss_pred ECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---------CCCceEEEECCCCCHHHHHHHhh--CCCEEEEC
Confidence 7999999999999999999 999999998765322221 02579999999999999999999 99999999
Q ss_pred ccCC----------------hhcHHHHHHhCC---CCCcEEEeeccccccCCCCCCCC--CCC---CC-CCCccc-hhhH
Q 022578 80 NGRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC--ETD---TV-DPKSRH-KGKL 133 (295)
Q Consensus 80 a~~~----------------~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~--e~~---~~-~p~~~~-~~k~ 133 (295)
|+.. +.++.+++++|. ++++|||+||.++|+.....+++ |+. +. .|.+.| .+|+
T Consensus 107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~ 186 (377)
T 2q1s_A 107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI 186 (377)
T ss_dssp CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence 9862 446889999987 46899999999999987666777 776 55 565555 9999
Q ss_pred HHHHHhhh----cCCcEEEeccCeeecCCC---------C-----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 134 NTESVLES----KGVNWTSLRPVYIYGPLN---------Y-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 134 ~~E~~~~~----~~~~~~i~R~~~i~g~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
.+|++++. .+++++++||+.+|||+. . ..++..++..+..+.++.+++++++.+++++++|+
T Consensus 187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv 266 (377)
T 2q1s_A 187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV 266 (377)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHH
Confidence 99998854 589999999999999976 2 34577788888888888777888899999999999
Q ss_pred HHH-HHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 196 ARA-FVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 196 a~~-i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|++ ++.++.++. .| +||+++++.+|+.|+++.+++.+|.+
T Consensus 267 a~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~ 307 (377)
T 2q1s_A 267 ANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNN 307 (377)
T ss_dssp HHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCC
Confidence 999 999998765 56 99999999999999999999999987
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=244.31 Aligned_cols=223 Identities=23% Similarity=0.263 Sum_probs=187.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|........+ ..+++++.+|++|++++.+++++.++|+|||++
T Consensus 6 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a 74 (311)
T 2p5y_A 6 TGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----------PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQA 74 (311)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-----------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-----------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence 799999999999999999999999998644322111 146788999999999999999866899999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeecc-ccccC-CCCCCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSA-GVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~-~v~~~-~~~~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
+. |..++.++++++. ++++||++||. ++|+. ....+.+|+.+..|.+.| .+|+.+|+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 154 (311)
T 2p5y_A 75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL 154 (311)
T ss_dssp SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence 85 3446788999987 77899999999 99987 555678888887776655 9999999987
Q ss_pred h----hcCCcEEEeccCeeecCCCCC----chHHHHHHHHHcCCCcccC-----CCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 140 E----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIP-----GSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 140 ~----~~~~~~~i~R~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
+ +.+++++++||+++|||+... .++..++..+..+.++.++ +++++.++++|++|+|++++.++.++
T Consensus 155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 234 (311)
T 2p5y_A 155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL 234 (311)
T ss_dssp HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence 4 468999999999999997642 3456677777788877666 78888999999999999999998764
Q ss_pred CCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 207 KASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 207 ~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+|+.|+++.+++.+|.+
T Consensus 235 ---~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 262 (311)
T 2p5y_A 235 ---EGIYNVGTGEGHTTREVLMAVAEAAGKA 262 (311)
T ss_dssp ---CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred ---CCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 7899999999999999999999999986
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=244.73 Aligned_cols=226 Identities=19% Similarity=0.285 Sum_probs=185.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|........+ ..+++++.+|++|.+++.++++..++|+|||+|
T Consensus 7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a 75 (330)
T 2c20_A 7 CGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----------TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA 75 (330)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-----------CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc-----------CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence 799999999999999999999999999765532221 137899999999999999999866899999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhh
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~ 141 (295)
+. |+.++.+++++|. ++++|||+||.++|+.....+++|+++..|.+.| .+|..+|++++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 155 (330)
T 2c20_A 76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW 155 (330)
T ss_dssp CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence 85 2456888999987 7889999999999998777789999988886665 999999998854
Q ss_pred ----cCCcEEEeccCeeecCCC----------CCchHHHHHHHHHc-CCCcccCC------CCCceeeeeeHHHHHHHHH
Q 022578 142 ----KGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 142 ----~~~~~~i~R~~~i~g~~~----------~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~~D~a~~i~ 200 (295)
.+++++++||+.+|||+. ...++..++..... +..+.+++ ++++.++++|++|+|++++
T Consensus 156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~ 235 (330)
T 2c20_A 156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF 235 (330)
T ss_dssp HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHH
T ss_pred HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHH
Confidence 489999999999999962 12345555554432 33455555 6788999999999999999
Q ss_pred HHhcCCCC--CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 201 QVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 201 ~~~~~~~~--~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.++.++.. .+++||+++++.+|+.|+++.+++.+|.+
T Consensus 236 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 274 (330)
T 2c20_A 236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHE 274 (330)
T ss_dssp HHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSC
T ss_pred HHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 99876422 36799999999999999999999999987
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-34 Score=244.63 Aligned_cols=224 Identities=20% Similarity=0.248 Sum_probs=186.1
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-hHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++ |++|++++|++........ ..+++++.+|++| .+.+.++++ ++|+|||
T Consensus 6 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih 73 (345)
T 2bll_A 6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP 73 (345)
T ss_dssp ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc----------CCCeEEEeccccCcHHHHHhhcc--CCCEEEE
Confidence 799999999999999998 8999999998766332211 2579999999998 467888998 8999999
Q ss_pred cccCC----------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCC-------CCCc-cchhh
Q 022578 79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKS-RHKGK 132 (295)
Q Consensus 79 ~a~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~p~~-~~~~k 132 (295)
+|+.. ..++.++++++. + ++|||+||.++|+.....+++|+++. .|.+ |..+|
T Consensus 74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK 152 (345)
T 2bll_A 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK 152 (345)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHH
Confidence 99852 346788999987 6 89999999999998777777887653 2223 44899
Q ss_pred HHHHHHhh----hcCCcEEEeccCeeecCCCC---------CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 133 ~~~E~~~~----~~~~~~~i~R~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|++++ +.+++++++||+.+|||+.. ...+..++..+..++++.+++++++.++++|++|+|+++
T Consensus 153 ~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 232 (345)
T 2bll_A 153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 232 (345)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHH
Confidence 99999884 45899999999999999853 234667777788888887778888999999999999999
Q ss_pred HHHhcCCC--CCCceEEecCCc-ccCHHHHHHHHHHHhCCC
Q 022578 200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGLL 237 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~-~~t~~e~~~~i~~~~g~~ 237 (295)
+.++.++. ..+++||+++++ .+|+.|+++.+.+.+|.+
T Consensus 233 ~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~ 273 (345)
T 2bll_A 233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH 273 (345)
T ss_dssp HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTC
T ss_pred HHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99998754 457899999986 899999999999999876
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=241.89 Aligned_cols=228 Identities=21% Similarity=0.330 Sum_probs=191.1
Q ss_pred CCcCCcchHHHHHHHHHC---C---CeEEEEecCCCcc-ccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKE---G---HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 73 (295)
|||+||||++++++|+++ | ++|++++|..... ...+. . .....+++++.+|++|++++.+++. ++
T Consensus 6 TGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 77 (337)
T 1r6d_A 6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA-----P-VDADPRLRFVHGDIRDAGLLARELR--GV 77 (337)
T ss_dssp ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG-----G-GTTCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred ECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh-----h-cccCCCeEEEEcCCCCHHHHHHHhc--CC
Confidence 799999999999999997 8 9999999975321 11110 0 0012578999999999999999997 99
Q ss_pred cEEEEcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHH
Q 022578 74 DVVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN 134 (295)
Q Consensus 74 d~vi~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~ 134 (295)
|+|||+|+. |..++.++++++. ++++|||+||.++||.....+++|+.+..|.+.| .+|..
T Consensus 78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~ 157 (337)
T 1r6d_A 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG 157 (337)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHH
Confidence 999999985 3457889999987 7789999999999997766788898887777665 99999
Q ss_pred HHHHhh----hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 135 ~E~~~~----~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
+|++++ +.+++++++||+.+|||+.. ..++..++..+..++++.+++++++.++++|++|+|++++.++.++. .
T Consensus 158 ~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~ 236 (337)
T 1r6d_A 158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A 236 (337)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred HHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-C
Confidence 999874 35899999999999999864 35566777778888888777888899999999999999999987653 5
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+|+.|+++.+++.+|.+
T Consensus 237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 237 GEIYHIGGGLELTNRELTGILLDSLGAD 264 (337)
T ss_dssp TCEEEECCCCEEEHHHHHHHHHHHHTCC
T ss_pred CCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 7899999999999999999999999987
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-34 Score=245.20 Aligned_cols=217 Identities=18% Similarity=0.197 Sum_probs=180.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|++..... +. ..+++++.+|++|++++.++++ ++|+|||+|
T Consensus 19 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l~----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a 85 (342)
T 2x4g_A 19 LGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LA----------YLEPECRVAEMLDHAGLERALR--GLDGVIFSA 85 (342)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-GG----------GGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-hc----------cCCeEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence 7999999999999999999999999998766321 11 1378999999999999999999 899999999
Q ss_pred cC--------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCC--CCCCCCCCCCC----Cccc-hhhHHHHH
Q 022578 81 GR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL--LPHCETDTVDP----KSRH-KGKLNTES 137 (295)
Q Consensus 81 ~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~--~~~~e~~~~~p----~~~~-~~k~~~E~ 137 (295)
+. |..++.+++++|. ++++|||+||.++|+.... .+ +|+++..| .+.| .+|+.+|+
T Consensus 86 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~ 164 (342)
T 2x4g_A 86 GYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDE 164 (342)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHH
T ss_pred ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHH
Confidence 85 3456889999987 8899999999999987554 44 88888877 5555 99999999
Q ss_pred Hhhh---cCCcEEEeccCeeecCCC-CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceE
Q 022578 138 VLES---KGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213 (295)
Q Consensus 138 ~~~~---~~~~~~i~R~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~ 213 (295)
+++. .+++++++||+.+|||+. ... +..++..+..+....+ ++..++++|++|+|++++.++.++.. +++|
T Consensus 165 ~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~ 239 (342)
T 2x4g_A 165 QAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERY 239 (342)
T ss_dssp HHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred HHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence 8854 389999999999999976 323 4556677777776554 45788999999999999999987654 7899
Q ss_pred EecCCcccCHHHHHHHHHHHhCCC
Q 022578 214 NISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 214 ~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|+++++ +|+.|+++.+.+.+|.+
T Consensus 240 ~v~~~~-~s~~e~~~~i~~~~g~~ 262 (342)
T 2x4g_A 240 LLTGHN-LEMADLTRRIAELLGQP 262 (342)
T ss_dssp EECCEE-EEHHHHHHHHHHHHTCC
T ss_pred EEcCCc-ccHHHHHHHHHHHhCCC
Confidence 999999 99999999999999987
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=251.21 Aligned_cols=215 Identities=16% Similarity=0.210 Sum_probs=181.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++|+ +.... ..+++++.+|++|++++.++++..++|+|||+|
T Consensus 12 tGatG~iG~~l~~~L~~~g~------~~~~~----------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A 69 (319)
T 4b8w_A 12 TGGSGLVGKAIQKVVADGAG------LPGED----------------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLA 69 (319)
T ss_dssp ETCSSHHHHHHHHHHHTTTC------CTTCE----------------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHhcCC------ccccc----------------ccccCceecccCCHHHHHHHHhhcCCCEEEECc
Confidence 79999999999999999998 11111 134556689999999999999965699999998
Q ss_pred cC-----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC----CCCCCc--cchhhHHH
Q 022578 81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKS--RHKGKLNT 135 (295)
Q Consensus 81 ~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~p~~--~~~~k~~~ 135 (295)
+. |+.++.+++++|+ ++++|||+||.++|+.....+++|++ +..|.. |..+|..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 149 (319)
T 4b8w_A 70 AMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMI 149 (319)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHH
T ss_pred eecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHH
Confidence 86 3446889999987 88899999999999998888999987 666665 44999999
Q ss_pred HHHhh----hcCCcEEEeccCeeecCCCC-----CchHHHHHHH----HHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 136 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 136 E~~~~----~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
|++++ +.+++++++||+++|||+.. ...+..++.. +..++++.+++++++.++++|++|+|++++.+
T Consensus 150 E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 229 (319)
T 4b8w_A 150 DVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV 229 (319)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHH
Confidence 99874 47999999999999999863 2355666666 77888888889999999999999999999999
Q ss_pred hcCCC-CCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 203 LGNEK-ASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 203 ~~~~~-~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+.++. ..+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 230 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 265 (319)
T 4b8w_A 230 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFH 265 (319)
T ss_dssp HHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCC
T ss_pred HhccccCCceEEEecCCCceeHHHHHHHHHHHhCCC
Confidence 98743 446799999999999999999999999987
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=242.17 Aligned_cols=228 Identities=18% Similarity=0.169 Sum_probs=188.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--ccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++|++|++++|++..... ..+.. ...+++++.+|++|++++.++++..++|+|||
T Consensus 20 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (335)
T 1rpn_A 20 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-------WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 92 (335)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-------cchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 7999999999999999999999999998765210 00011 12478999999999999999998556899999
Q ss_pred cccC----------------ChhcHHHHHHhCC--CC-CcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHH
Q 022578 79 INGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~ 138 (295)
+|+. |..++.++++++. ++ ++|||+||.++|+.....+++|+.+..|.+.| .+|+.+|.+
T Consensus 93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~ 172 (335)
T 1rpn_A 93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI 172 (335)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHH
Confidence 9985 2346788999987 65 89999999999998777788999988887765 999999998
Q ss_pred hhh----cCCcEEEeccCeeecCCCCCch----HHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 139 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 139 ~~~----~~~~~~i~R~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
++. .+++++++||+.+|||+....+ +..++..+..|+. ...++++++.++++|++|+|++++.++.++.
T Consensus 173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-- 250 (335)
T 1rpn_A 173 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-- 250 (335)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred HHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--
Confidence 854 4899999999999999764332 3445556666764 3345888899999999999999999998764
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 251 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 251 ADDYVVATGVTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp CCCEEECCSCEEEHHHHHHHHHHTTTCC
T ss_pred CCEEEEeCCCCccHHHHHHHHHHHhCCC
Confidence 4799999999999999999999999986
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=241.32 Aligned_cols=205 Identities=14% Similarity=0.122 Sum_probs=182.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|. .+|++|.+.+.++++..++|+|||+|
T Consensus 11 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~D~~d~~~~~~~~~~~~~d~vi~~a 64 (287)
T 3sc6_A 11 TGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------LLDITNISQVQQVVQEIRPHIIIHCA 64 (287)
T ss_dssp ESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence 7999999999999999999999999982 16889999999999866799999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhh
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~ 141 (295)
+. |..++.+++++++ ++ +|||+||.++|+.....+++|+++..|.+.| .+|..+|++++.
T Consensus 65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 143 (287)
T 3sc6_A 65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE 143 (287)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 86 3446889999988 66 8999999999998888899999999888766 999999999999
Q ss_pred cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccc
Q 022578 142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221 (295)
Q Consensus 142 ~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~ 221 (295)
...+++++||+.+|||+.. .++..++..+..+.++.++++ +.++++|++|+|++++.++.++. +++||+++++.+
T Consensus 144 ~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~ 218 (287)
T 3sc6_A 144 LHNKYFIVRTSWLYGKYGN-NFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSC 218 (287)
T ss_dssp HCSSEEEEEECSEECSSSC-CHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCE
T ss_pred hCCCcEEEeeeeecCCCCC-cHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcc
Confidence 8889999999999999754 466777888878888777654 88999999999999999999876 679999999999
Q ss_pred CHHHHHHHHHHHhCCC
Q 022578 222 TFDGLARACAKVTGLL 237 (295)
Q Consensus 222 t~~e~~~~i~~~~g~~ 237 (295)
|+.|+++.+++.+|.+
T Consensus 219 s~~e~~~~i~~~~g~~ 234 (287)
T 3sc6_A 219 SWFEFAKKIFSYANMK 234 (287)
T ss_dssp EHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHcCCC
Confidence 9999999999999987
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=246.70 Aligned_cols=222 Identities=19% Similarity=0.258 Sum_probs=185.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|++....... ..+++++.+|++|.+++.++++ ++|+|||+|
T Consensus 35 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A 101 (379)
T 2c5a_A 35 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA 101 (379)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred ECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-----------cCCceEEECCCCCHHHHHHHhC--CCCEEEECc
Confidence 799999999999999999999999999876532111 2478999999999999999998 999999999
Q ss_pred cC-----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCC-----CCCCCCC--CCCCCccc-hhhH
Q 022578 81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-----LPHCETD--TVDPKSRH-KGKL 133 (295)
Q Consensus 81 ~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~-----~~~~e~~--~~~p~~~~-~~k~ 133 (295)
+. |..++.++++++. ++++|||+||.++|+.... .+++|++ +..|.+.| .+|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~ 181 (379)
T 2c5a_A 102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL 181 (379)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence 85 2335788999987 7889999999999986432 3466765 44555555 9999
Q ss_pred HHHHHhh----hcCCcEEEeccCeeecCCCCC-----chHHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 134 ~~E~~~~----~~~~~~~i~R~~~i~g~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
.+|++++ +.+++++++||+.+|||+... ..+..++..+..+.+ +.+++++++.++++|++|+|++++.++
T Consensus 182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l 261 (379)
T 2c5a_A 182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261 (379)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence 9999874 458999999999999997532 256677777777776 667788889999999999999999999
Q ss_pred cCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 204 ~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.++ .+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 262 ~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 293 (379)
T 2c5a_A 262 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKK 293 (379)
T ss_dssp HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCC
T ss_pred hcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCC
Confidence 875 46799999999999999999999999987
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=238.84 Aligned_cols=228 Identities=24% Similarity=0.281 Sum_probs=187.3
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCcc-ccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
|||+||||++++++|+++| ++|++++|.+... ...+.. +. ...+++++.+|++|++++.+++. ++|+||
T Consensus 9 TGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 80 (336)
T 2hun_A 9 TGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKD-----LE-DDPRYTFVKGDVADYELVKELVR--KVDGVV 80 (336)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTT-----TT-TCTTEEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred ECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhh-----hc-cCCceEEEEcCCCCHHHHHHHhh--CCCEEE
Confidence 7999999999999999996 8999999975321 111110 00 02578999999999999999998 999999
Q ss_pred EcccC----------------ChhcHHHHHHhCC--CC-CcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 78 DINGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 78 ~~a~~----------------~~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
|+|+. |+.++.++++++. +. ++|||+||.++||.....+++|+.+..|.+.| .+|..+|+
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 160 (336)
T 2hun_A 81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM 160 (336)
T ss_dssp ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence 99986 3446888999987 43 79999999999998766788898887777665 99999999
Q ss_pred Hhhh----cCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCce
Q 022578 138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212 (295)
Q Consensus 138 ~~~~----~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ 212 (295)
+++. .+++++++||+.+|||+.. ..++..++..+..++++.+++++++.++++|++|+|++++.++.++. .+++
T Consensus 161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~ 239 (336)
T 2hun_A 161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SREI 239 (336)
T ss_dssp HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCCE
Confidence 8853 6899999999999999864 34566777788888888777888899999999999999999987643 5789
Q ss_pred EEecCCcccCHHHHHHHHHHHhCCC
Q 022578 213 FNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 213 ~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
||+++++.+|+.|+++.+++.+|.+
T Consensus 240 ~~v~~~~~~s~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 240 YNISAGEEKTNLEVVKIILRLMGKG 264 (336)
T ss_dssp EEECCSCEECHHHHHHHHHHHTTCC
T ss_pred EEeCCCCcccHHHHHHHHHHHhCCC
Confidence 9999999999999999999999986
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=240.26 Aligned_cols=225 Identities=17% Similarity=0.196 Sum_probs=188.8
Q ss_pred CCcCCcchHHHHHHHHHC--CCeEEEEecCCCcc-ccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
|||+||||++++++|+++ |++|++++|.+... ...+ ... ..+++++.+|++|++++.++++ ++|+|
T Consensus 10 TGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v 79 (348)
T 1oc2_A 10 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL--------EAILGDRVELVVGDIADAELVDKLAA--KADAI 79 (348)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT--------GGGCSSSEEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred eCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH--------hhhccCCeEEEECCCCCHHHHHHHhh--cCCEE
Confidence 799999999999999999 89999999976421 1111 111 2578999999999999999999 89999
Q ss_pred EEcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCC------------CCCCCCCCCCCC
Q 022578 77 YDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL------------LPHCETDTVDPK 126 (295)
Q Consensus 77 i~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~------------~~~~e~~~~~p~ 126 (295)
||+|+. |+.++.++++++. ++ +|||+||.++||.... .+++|+.+..|.
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 158 (348)
T 1oc2_A 80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS 158 (348)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCC
Confidence 999986 3446889999987 66 9999999999986532 578888887777
Q ss_pred ccc-hhhHHHHHHhhh----cCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 127 SRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 127 ~~~-~~k~~~E~~~~~----~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
+.| .+|+.+|.+++. .+++++++||+.+|||+.. ..++..++..+..+.++.+++++++.++++|++|+|++++
T Consensus 159 ~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 238 (348)
T 1oc2_A 159 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW 238 (348)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHH
Confidence 665 999999998853 5899999999999999864 3556677777888888777788889999999999999999
Q ss_pred HHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 201 QVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 201 ~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.++.++ ..+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 239 ~~~~~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 274 (348)
T 1oc2_A 239 AILTKG-RMGETYLIGADGEKNNKEVLELILEKMGQP 274 (348)
T ss_dssp HHHHHC-CTTCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred HHhhCC-CCCCeEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence 998765 357899999999999999999999999987
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=241.34 Aligned_cols=230 Identities=15% Similarity=0.181 Sum_probs=187.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|++++|++........ ......+++++.+|++|++++.++++..++|+|||+|
T Consensus 15 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 88 (357)
T 1rkx_A 15 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE------TARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 88 (357)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH------HTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhH------hhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence 7999999999999999999999999998765321100 0001257899999999999999999844599999999
Q ss_pred cC----------------ChhcHHHHHHhCC--C-CCcEEEeeccccccCCCC-CCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~-~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
+. |+.++.++++++. + +++|||+||.++||.... .+++|+++..|.+.| .+|..+|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 168 (357)
T 1rkx_A 89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT 168 (357)
T ss_dssp SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence 84 3456888999987 5 889999999999987543 467787777776655 9999999988
Q ss_pred hhc-------------CCcEEEeccCeeecCCCC--CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 140 ESK-------------GVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 140 ~~~-------------~~~~~i~R~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+.. +++++++||+.+|||+.. ..++..++..+..+.++.+. +++..++++|++|+|++++.++.
T Consensus 169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~ 247 (357)
T 1rkx_A 169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQ 247 (357)
T ss_dssp HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHH
Confidence 542 899999999999999864 35677888888888887664 56788999999999999999886
Q ss_pred C----CCCCCceEEecCC--cccCHHHHHHHHHHHhCCC
Q 022578 205 N----EKASRQVFNISGE--KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 205 ~----~~~~~~~~~i~~~--~~~t~~e~~~~i~~~~g~~ 237 (295)
+ +...+++||++++ +.+|+.|+++.+++.+|.+
T Consensus 248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~ 286 (357)
T 1rkx_A 248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEG 286 (357)
T ss_dssp HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTT
T ss_pred hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCC
Confidence 4 2345789999984 6799999999999999986
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-33 Score=240.11 Aligned_cols=237 Identities=19% Similarity=0.202 Sum_probs=186.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCC-CCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-PGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++|++|++++|........- .......+.. ...+++++.+|++|.+++.++++..++|+|||
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih 87 (348)
T 1ek6_A 8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH 87 (348)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 799999999999999999999999998754300000 0000001111 12478999999999999999998668999999
Q ss_pred cccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC-Cccc-hhhHHHHHH
Q 022578 79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTESV 138 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~-~~k~~~E~~ 138 (295)
+|+. |..++.+++++++ ++++|||+||.++|+.....+++|+.+..| .+.| .+|+.+|++
T Consensus 88 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~ 167 (348)
T 1ek6_A 88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167 (348)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred CCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHH
Confidence 9986 2456888999987 778999999999999877788999988777 4444 999999998
Q ss_pred hhhc---C--CcEEEeccCeeecCCC-----------CCchHHHHHHHHH-cCCCcccCC------CCCceeeeeeHHHH
Q 022578 139 LESK---G--VNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDL 195 (295)
Q Consensus 139 ~~~~---~--~~~~i~R~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~ 195 (295)
++.. + ++++++||+++|||+. ...++..++.... .+.++.+++ ++++.++++|++|+
T Consensus 168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv 247 (348)
T 1ek6_A 168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL 247 (348)
T ss_dssp HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred HHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHH
Confidence 8542 4 9999999999999842 1345666666665 566666555 67889999999999
Q ss_pred HHHHHHHhcCCC-CCC-ceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 196 ARAFVQVLGNEK-ASR-QVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 196 a~~i~~~~~~~~-~~~-~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|++++.++.++. ..+ ++||+++++.+|+.|+++.+++.+|.+
T Consensus 248 a~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 291 (348)
T 1ek6_A 248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291 (348)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 999999987642 333 799999999999999999999999986
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=246.64 Aligned_cols=216 Identities=21% Similarity=0.299 Sum_probs=181.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCc---cccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
||||||||++++++|+++|++|++++|++.. ....+.. .....+++++.+|+. ++|+||
T Consensus 13 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~~Dl~------------~~d~vi 74 (321)
T 3vps_A 13 TGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK------FLEKPVLELEERDLS------------DVRLVY 74 (321)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE------EECSCGGGCCHHHHT------------TEEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh------hccCCCeeEEeCccc------------cCCEEE
Confidence 7999999999999999999999999998773 1111110 000134555555554 799999
Q ss_pred EcccC---------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 78 DINGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 78 ~~a~~---------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
|+|+. |+.++.++++++. ++++|||+||.++|+.....+++|+++..|.+.| .+|..+|+++
T Consensus 75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~ 154 (321)
T 3vps_A 75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA 154 (321)
T ss_dssp ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence 99985 3457789999988 8899999999999999888899999998887766 9999999988
Q ss_pred hh----cCC-cEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceE
Q 022578 140 ES----KGV-NWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213 (295)
Q Consensus 140 ~~----~~~-~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~ 213 (295)
+. .++ +++++||+.+|||+.. ..++..++..+..++++.++++++..++++|++|+|++++.++.++.. | +|
T Consensus 155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~~ 232 (321)
T 3vps_A 155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-VV 232 (321)
T ss_dssp HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-EE
T ss_pred HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-eE
Confidence 54 588 9999999999999875 356778888888888888888999999999999999999999998765 6 99
Q ss_pred EecCCcccCHHHHHHHHHHHhCCC
Q 022578 214 NISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 214 ~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|+++++.+|+.|+++.+. .+|.+
T Consensus 233 ~i~~~~~~s~~e~~~~i~-~~g~~ 255 (321)
T 3vps_A 233 NFGSGQSLSVNDVIRILQ-ATSPA 255 (321)
T ss_dssp EESCSCCEEHHHHHHHHH-TTCTT
T ss_pred EecCCCcccHHHHHHHHH-HhCCC
Confidence 999999999999999999 99987
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-33 Score=244.35 Aligned_cols=235 Identities=19% Similarity=0.205 Sum_probs=184.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCcccc------CCCCCC--chhh----hhccCCeEEEEecCCChHHHHHhh
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPGES--DQEF----AEFSSKILHLKGDRKDYDFVKSSL 68 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~--~~~~----~~~~~~v~~~~~D~~~~~~~~~~~ 68 (295)
|||+||||++++++|+++|++|++++|....... .+.... ...+ .....+++++.+|++|++++.+++
T Consensus 17 TG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 96 (404)
T 1i24_A 17 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF 96 (404)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHH
Confidence 7999999999999999999999999986432100 000000 0000 011257899999999999999999
Q ss_pred hcCCCcEEEEcccC-------------------ChhcHHHHHHhCC--CC-CcEEEeeccccccCCCCCCCCCC------
Q 022578 69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCET------ 120 (295)
Q Consensus 69 ~~~~~d~vi~~a~~-------------------~~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~------ 120 (295)
+..++|+|||+|+. |+.++.++++++. +. ++||++||.++||... .+++|+
T Consensus 97 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~~~~~~~ 175 (404)
T 1i24_A 97 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEGYITITH 175 (404)
T ss_dssp HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEE
T ss_pred hccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCcccccccc
Confidence 84449999999975 2346788999987 65 5999999999998654 456664
Q ss_pred --------CCCCCCccc-hhhHHHHHHhhh----cCCcEEEeccCeeecCCCC------------------CchHHHHHH
Q 022578 121 --------DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH 169 (295)
Q Consensus 121 --------~~~~p~~~~-~~k~~~E~~~~~----~~~~~~i~R~~~i~g~~~~------------------~~~~~~~~~ 169 (295)
.+..|.+.| .+|+.+|.+++. .+++++++||+.+|||+.. ...+..++.
T Consensus 176 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (404)
T 1i24_A 176 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV 255 (404)
T ss_dssp TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred ccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHH
Confidence 344555555 999999998743 4899999999999999763 245777888
Q ss_pred HHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC--ceEEecCCcccCHHHHHHHHHHH---hCCC
Q 022578 170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKV---TGLL 237 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~--~~~~i~~~~~~t~~e~~~~i~~~---~g~~ 237 (295)
.+..|+++.+++++++.++++|++|+|++++.++.++...+ ++||+++ +.+|+.|+++.+++. +|.+
T Consensus 256 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~ 327 (404)
T 1i24_A 256 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLD 327 (404)
T ss_dssp HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCC
T ss_pred HHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCC
Confidence 88889888777888999999999999999999998765445 6999998 889999999999998 7776
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-34 Score=242.22 Aligned_cols=222 Identities=16% Similarity=0.183 Sum_probs=171.0
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC---CCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~---~~d~v 76 (295)
|||+||||++++++|+++| ++|++++|.+..... .. ..++. +.+|+++.+.+..+++.. ++|+|
T Consensus 5 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-------~~----~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v 72 (310)
T 1eq2_A 5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VN----LVDLN-IADYMDKEDFLIQIMAGEEFGDVEAI 72 (310)
T ss_dssp ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-------HH----HHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred EcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh-------hh----cCcce-eccccccHHHHHHHHhccccCCCcEE
Confidence 7999999999999999999 999999998765210 00 01333 778999999999998721 49999
Q ss_pred EEcccC--------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 77 YDINGR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 77 i~~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
||+|+. |..++.++++++. ++ +|||+||.++|+.....+++|+++..|.+.| .+|..+|+++
T Consensus 73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~ 151 (310)
T 1eq2_A 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV 151 (310)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence 999985 3456889999987 77 9999999999998777788898888887665 9999999988
Q ss_pred hh----cCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccCCCCCc-eeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 140 ES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 140 ~~----~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
+. .+++++++||+.+|||+.. ..++..++..+..++++.++++++. .++++|++|+|++++.++.++.
T Consensus 152 ~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-- 229 (310)
T 1eq2_A 152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-- 229 (310)
T ss_dssp HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence 53 4799999999999999864 3566778888888888777788888 9999999999999999998765
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 230 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 230 SGIFNLGTGRAESFQAVADATLAYHKKG 257 (310)
T ss_dssp CEEEEESCSCCBCHHHHHHHC-------
T ss_pred CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence 7899999999999999999999999875
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=238.56 Aligned_cols=210 Identities=20% Similarity=0.227 Sum_probs=177.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||| ||||++++++|+++|++|++++|++.+..... ..+++++.+|++|.+ +. ++|+|||+|
T Consensus 11 tGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~d~~-----~~--~~d~vi~~a 71 (286)
T 3ius_A 11 FGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-----------ASGAEPLLWPGEEPS-----LD--GVTHLLIST 71 (286)
T ss_dssp ETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-----------HTTEEEEESSSSCCC-----CT--TCCEEEECC
T ss_pred ECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-----------hCCCeEEEecccccc-----cC--CCCEEEECC
Confidence 698 99999999999999999999999876632111 257999999999854 56 999999999
Q ss_pred cCCh---hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhhc-CCcEEEecc
Q 022578 81 GREA---DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK-GVNWTSLRP 151 (295)
Q Consensus 81 ~~~~---~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~-~~~~~i~R~ 151 (295)
+... ..+++++++++ ++++|||+||.++|+.....+++|+++..|.+.| .+|+.+|++++.. +++++++||
T Consensus 72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp 151 (286)
T 3ius_A 72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL 151 (286)
T ss_dssp CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence 8743 34678888865 6789999999999998888889999999888766 9999999999887 999999999
Q ss_pred CeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHH
Q 022578 152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA 231 (295)
Q Consensus 152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~ 231 (295)
+.+|||+... +..+..+....+.++ ++.++++|++|+|++++.++.++. .+++||+++++.+|+.|+++.++
T Consensus 152 ~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~ 223 (286)
T 3ius_A 152 AGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAA 223 (286)
T ss_dssp CEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHH
T ss_pred cceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHH
Confidence 9999997532 123445666665544 578999999999999999999876 57899999999999999999999
Q ss_pred HHhCCC
Q 022578 232 KVTGLL 237 (295)
Q Consensus 232 ~~~g~~ 237 (295)
+.+|.+
T Consensus 224 ~~~g~~ 229 (286)
T 3ius_A 224 ELQGLP 229 (286)
T ss_dssp HHHTCC
T ss_pred HHcCCC
Confidence 999987
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=244.64 Aligned_cols=232 Identities=21% Similarity=0.296 Sum_probs=182.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|......... ...+. ...+++++.+|++|++++.++++..++|+|||+|
T Consensus 7 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (347)
T 1orr_A 7 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN----LHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 81 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHH----HHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred eCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhh----hhhhc-cCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence 799999999999999999999999998642210000 00011 1246899999999999999999833499999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCC-cEEEeeccccccCCCCCC----------------CCCCCCCCC
Q 022578 81 GR----------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLP----------------HCETDTVDP 125 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~-~~i~~Ss~~v~~~~~~~~----------------~~e~~~~~p 125 (295)
+. |+.++.++++++. +++ +|||+||.++|+.....+ ++|+.+..|
T Consensus 82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~ 161 (347)
T 1orr_A 82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF 161 (347)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCC
Confidence 85 3446888999987 664 999999999998754433 556666666
Q ss_pred Cccc-hhhHHHHHHhhh----cCCcEEEeccCeeecCCCCC----chHHHHHHHHHcCC-----CcccCCCCCceeeeee
Q 022578 126 KSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGR-----PIPIPGSGIQVTQLGH 191 (295)
Q Consensus 126 ~~~~-~~k~~~E~~~~~----~~~~~~i~R~~~i~g~~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~ 191 (295)
.+.| .+|+.+|++++. .+++++++||+.+|||+... ..+..++..+..+. ++..++++++.+++++
T Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 241 (347)
T 1orr_A 162 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 241 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEE
Confidence 6555 999999998854 48999999999999997532 34555666655555 6666788999999999
Q ss_pred HHHHHHHHHHHhcC-CCCCCceEEecCCc--ccCHHHHHHHHHHHhCCC
Q 022578 192 VKDLARAFVQVLGN-EKASRQVFNISGEK--YVTFDGLARACAKVTGLL 237 (295)
Q Consensus 192 ~~D~a~~i~~~~~~-~~~~~~~~~i~~~~--~~t~~e~~~~i~~~~g~~ 237 (295)
++|+|++++.++.+ ....|++||++++. .+|+.|+++.+.+.+|.+
T Consensus 242 v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~ 290 (347)
T 1orr_A 242 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNID 290 (347)
T ss_dssp HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCC
Confidence 99999999999986 23457899999986 499999999999999987
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=236.17 Aligned_cols=221 Identities=18% Similarity=0.196 Sum_probs=184.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|+.......... ..+++++.+|++|.+++.+++++.++|+|||+|
T Consensus 26 TGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 96 (330)
T 2pzm_A 26 TGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP---------VAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA 96 (330)
T ss_dssp ETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc---------cCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence 79999999999999999999999999976542211110 147899999999999999999766899999999
Q ss_pred cC-------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCC--CCCCCCCCCCCccc-hhhHHHHHHhhhc
Q 022578 81 GR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTESVLESK 142 (295)
Q Consensus 81 ~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~--~~~e~~~~~p~~~~-~~k~~~E~~~~~~ 142 (295)
+. |..++.++++++. ++++||++||.++|+..... +++|+. .|...| .+|+.+|++++..
T Consensus 97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~ 174 (330)
T 2pzm_A 97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFLMMS 174 (330)
T ss_dssp CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHHHTC
T ss_pred ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHHHHc
Confidence 85 3456888999987 88899999999999876544 777776 444444 9999999999888
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH-HHHHHhcCCCCCCceEEecCCccc
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR-AFVQVLGNEKASRQVFNISGEKYV 221 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~-~i~~~~~~~~~~~~~~~i~~~~~~ 221 (295)
+++++++||+++|||+....++..++..+..+. ..++++. .+++++++|+|+ +++.++.++. +++||+++++.+
T Consensus 175 ~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~ 249 (330)
T 2pzm_A 175 DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGH 249 (330)
T ss_dssp SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCE
T ss_pred CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCC
Confidence 999999999999999875556666777776666 4456666 889999999999 9999998754 889999999999
Q ss_pred CHHHHHHHHHHHhCCC
Q 022578 222 TFDGLARACAKVTGLL 237 (295)
Q Consensus 222 t~~e~~~~i~~~~g~~ 237 (295)
|+.|+++.+.+.+|.+
T Consensus 250 s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 250 SIKEVFDVVLDYVGAT 265 (330)
T ss_dssp EHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHhCCC
Confidence 9999999999999976
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=242.19 Aligned_cols=237 Identities=21% Similarity=0.287 Sum_probs=183.0
Q ss_pred CCcCCcchHHHHHHHH-HCCCeEEEEecCCCccccCCCCCCchhh----hhc-----cCC---eEEEEecCCChHHHHHh
Q 022578 1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEF----AEF-----SSK---ILHLKGDRKDYDFVKSS 67 (295)
Q Consensus 1 tGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~-----~~~---v~~~~~D~~~~~~~~~~ 67 (295)
|||+||||++++++|+ ++|++|++++|........-.......+ .+. ..+ ++++.+|++|++++.++
T Consensus 8 TGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 87 (397)
T 1gy8_A 8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV 87 (397)
T ss_dssp ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHH
Confidence 7999999999999999 9999999999976542000000000001 011 124 89999999999999999
Q ss_pred hhcCC-CcEEEEcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCC-------CCCCCCCC
Q 022578 68 LSAKG-FDVVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD 121 (295)
Q Consensus 68 ~~~~~-~d~vi~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~-------~~~~~e~~ 121 (295)
+++.+ +|+|||+|+. |+.++.+++++|. ++++|||+||.++|+... ..+++|++
T Consensus 88 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~ 167 (397)
T 1gy8_A 88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA 167 (397)
T ss_dssp HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred HHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCccC
Confidence 98666 9999999986 3457888999987 788999999999998765 57889998
Q ss_pred CCCCCccc-hhhHHHHHHhhh----cCCcEEEeccCeeecCCC----------CCchHHHHH----HHHHcCC-------
Q 022578 122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN----------YNPVEEWFF----HRLKAGR------- 175 (295)
Q Consensus 122 ~~~p~~~~-~~k~~~E~~~~~----~~~~~~i~R~~~i~g~~~----------~~~~~~~~~----~~~~~~~------- 175 (295)
+..|.+.| .+|+.+|++++. .+++++++||+++|||+. ...++..++ ..+..+.
T Consensus 168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
T 1gy8_A 168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED 247 (397)
T ss_dssp CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccc
Confidence 88776655 999999998854 589999999999999963 133444444 1333443
Q ss_pred -----CcccCC------CCCceeeeeeHHHHHHHHHHHhcCCCCC-----C---ceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 176 -----PIPIPG------SGIQVTQLGHVKDLARAFVQVLGNEKAS-----R---QVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 176 -----~~~~~~------~~~~~~~~i~~~D~a~~i~~~~~~~~~~-----~---~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
++.+++ ++++.++++|++|+|++++.++.++... + ++||+++++.+|+.|+++.+.+.+|.
T Consensus 248 ~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 327 (397)
T 1gy8_A 248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH 327 (397)
T ss_dssp ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred cccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCC
Confidence 355555 6788999999999999999998754322 3 79999999999999999999999998
Q ss_pred C
Q 022578 237 L 237 (295)
Q Consensus 237 ~ 237 (295)
+
T Consensus 328 ~ 328 (397)
T 1gy8_A 328 P 328 (397)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=234.64 Aligned_cols=219 Identities=21% Similarity=0.248 Sum_probs=181.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|++......+.. ..+++++.+|++|++++.++++..++|+|||+|
T Consensus 27 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 97 (333)
T 2q1w_A 27 TGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---------HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA 97 (333)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred eCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---------cCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence 79999999999999999999999999986542222210 147899999999999999999833499999999
Q ss_pred cCC-------------hhcHHHHHHhCC--CCCcEEEeecccccc----CCCCCCCCCCCCCCCC-c-cchhhHHHHHHh
Q 022578 81 GRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYL----KSDLLPHCETDTVDPK-S-RHKGKLNTESVL 139 (295)
Q Consensus 81 ~~~-------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~----~~~~~~~~e~~~~~p~-~-~~~~k~~~E~~~ 139 (295)
+.. ..++.++++++. ++++|||+||.++|+ .... +++|++ .|. . |..+|+.+|+++
T Consensus 98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~~ 174 (333)
T 2q1w_A 98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDYL 174 (333)
T ss_dssp CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHHH
T ss_pred eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHHH
Confidence 852 356888999987 778999999999998 5444 777776 454 4 459999999999
Q ss_pred hh-cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCC
Q 022578 140 ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218 (295)
Q Consensus 140 ~~-~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~ 218 (295)
+. .. +++++||+.+|||+....++..++..+..+. .+++ ++..+++++++|+|++++.++.++. +++||++++
T Consensus 175 ~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~ 248 (333)
T 2q1w_A 175 EYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSG 248 (333)
T ss_dssp HHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCS
T ss_pred HhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCC
Confidence 88 66 9999999999999854456677777777776 3445 6778999999999999999998765 789999999
Q ss_pred cccCHHHHHHHHHHHhCCC
Q 022578 219 KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 219 ~~~t~~e~~~~i~~~~g~~ 237 (295)
+.+|+.|+++.+++.+|.+
T Consensus 249 ~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 249 TDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp CCEEHHHHHHHHHHHTTCS
T ss_pred CCccHHHHHHHHHHHhCCC
Confidence 9999999999999999976
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-33 Score=239.64 Aligned_cols=221 Identities=17% Similarity=0.200 Sum_probs=187.0
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC---CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~---~~d~ 75 (295)
|||+||||++|+++|+++| ++|++++|.+.... ..+ .++. +.+|+++.+.+..+++.. ++|+
T Consensus 52 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 118 (357)
T 2x6t_A 52 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL------------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA 118 (357)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT------------TTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc------------cCce-EeeecCcHHHHHHHHhhcccCCCCE
Confidence 7999999999999999999 99999999876521 111 2333 678999999999888731 5999
Q ss_pred EEEcccC--------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHH
Q 022578 76 VYDINGR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (295)
Q Consensus 76 vi~~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~ 138 (295)
|||+|+. |+.++.++++++. ++ +|||+||.++|+.....+++|+.+..|.+.| .+|..+|++
T Consensus 119 Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 197 (357)
T 2x6t_A 119 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY 197 (357)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred EEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence 9999985 4457899999987 77 9999999999998777788999888887665 999999998
Q ss_pred hhh----cCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccCCCCCc-eeeeeeHHHHHHHHHHHhcCCCC
Q 022578 139 LES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 139 ~~~----~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
++. .+++++++||+.+|||+.. ...+..++..+..+.++.++++++. .+++++++|+|++++.++.++.
T Consensus 198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~- 276 (357)
T 2x6t_A 198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV- 276 (357)
T ss_dssp HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence 853 4799999999999999764 3456777788888888777788888 9999999999999999998765
Q ss_pred CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 209 SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 209 ~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 277 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 277 -SGIFNLGTGRAESFQAVADATLAYHKKG 304 (357)
T ss_dssp -CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred -CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence 7899999999999999999999999976
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-33 Score=235.77 Aligned_cols=221 Identities=14% Similarity=0.097 Sum_probs=179.3
Q ss_pred CCcCCcchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++ |++|++++|++.... + ..+++++.+|++|++++.+++++.++|+|||
T Consensus 8 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~-----------~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih 74 (312)
T 2yy7_A 8 IGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--V-----------VNSGPFEVVNALDFNQIEHLVEVHKITDIYL 74 (312)
T ss_dssp ETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--H-----------HHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred ECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--c-----------cCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence 799999999999999999 899999999866511 0 1367899999999999999998778999999
Q ss_pred cccC---------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCC-CCCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 79 INGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 79 ~a~~---------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
+|+. |..++.++++++. ++++|||+||.++|+... ..+.+|+.+..|.+.| .+|..+|+++
T Consensus 75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~ 154 (312)
T 2yy7_A 75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC 154 (312)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence 9986 2356789999987 788999999999998743 3567788777777665 9999999987
Q ss_pred h----hcCCcEEEeccCeeecCCCC------CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC-
Q 022578 140 E----SKGVNWTSLRPVYIYGPLNY------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA- 208 (295)
Q Consensus 140 ~----~~~~~~~i~R~~~i~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~- 208 (295)
+ +.+++++++||+.+|||... ......+...+ .+..+..++++++.++++|++|+|++++.+++++..
T Consensus 155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~ 233 (312)
T 2yy7_A 155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAI-ADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEK 233 (312)
T ss_dssp HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHH-HTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGG
T ss_pred HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHH-cCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccc
Confidence 4 35899999999999997531 11333344444 444455667888899999999999999999987653
Q ss_pred --CCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 209 --SRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 209 --~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
.+++||+++ +.+|+.|+++.+.+.+|.
T Consensus 234 ~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~ 262 (312)
T 2yy7_A 234 IKIHSSYNLAA-MSFTPTEIANEIKKHIPE 262 (312)
T ss_dssp CCCSSCEECCS-EEECHHHHHHHHHTTCTT
T ss_pred cccCceEEeCC-CccCHHHHHHHHHHHCCC
Confidence 247999987 889999999999999884
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=234.19 Aligned_cols=210 Identities=17% Similarity=0.156 Sum_probs=181.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+ +|++|++++|++. ++.+|++|++++.++++..++|+|||+|
T Consensus 6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------~~~~D~~d~~~~~~~~~~~~~d~vih~a 62 (299)
T 1n2s_A 6 FGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------EFCGDFSNPKGVAETVRKLRPDVIVNAA 62 (299)
T ss_dssp ECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------SSCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------cccccCCCHHHHHHHHHhcCCCEEEECc
Confidence 7999999999999999 8999999998752 2357999999999999844599999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhh
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~ 141 (295)
+. |..++.+++++++ ++ +|||+||.++|+.....+++|+++..|.+.| .+|..+|++++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 141 (299)
T 1n2s_A 63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (299)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 85 2456899999988 55 8999999999998877789999988887766 999999999988
Q ss_pred cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC--C-CCceEEecCC
Q 022578 142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A-SRQVFNISGE 218 (295)
Q Consensus 142 ~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~--~-~~~~~~i~~~ 218 (295)
...+++++||+.+|||+.. .++..++..+..+.++.++++ +.++++|++|+|++++.++.++. . .+++||++++
T Consensus 142 ~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~ 218 (299)
T 1n2s_A 142 NCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG 218 (299)
T ss_dssp HCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred hCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC
Confidence 8889999999999999764 456677777778887766554 78999999999999999998652 2 4789999999
Q ss_pred cccCHHHHHHHHHHHhCCC
Q 022578 219 KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 219 ~~~t~~e~~~~i~~~~g~~ 237 (295)
+.+|+.|+++.+.+.+|.+
T Consensus 219 ~~~s~~e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 219 GTTTWHDYAALVFDEARKA 237 (299)
T ss_dssp SCEEHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCC
Confidence 9999999999999999865
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=232.32 Aligned_cols=204 Identities=19% Similarity=0.200 Sum_probs=178.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++++++|+++|++|++++|+ .+|++|++++.++++..++|+|||+|
T Consensus 18 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~Dl~d~~~~~~~~~~~~~d~vih~A 71 (292)
T 1vl0_A 18 TGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------DLDITNVLAVNKFFNEKKPNVVINCA 71 (292)
T ss_dssp ESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence 7999999999999999999999999985 15889999999999855799999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhh
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~ 141 (295)
+. |..++.++++++. ++ +|||+||.++|+.....+++|+++..|.+.| .+|..+|++++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 150 (292)
T 1vl0_A 72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA 150 (292)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 86 2346789999987 76 9999999999998777789999988887765 999999999998
Q ss_pred cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccc
Q 022578 142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221 (295)
Q Consensus 142 ~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~ 221 (295)
.+.+++++||+.+||| . ..++..++..+..+.++.+++ +..+++++++|+|++++.++.++ .+++||+++++.+
T Consensus 151 ~~~~~~~lR~~~v~G~-~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~ 224 (292)
T 1vl0_A 151 LNPKYYIVRTAWLYGD-G-NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGIC 224 (292)
T ss_dssp HCSSEEEEEECSEESS-S-SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCE
T ss_pred hCCCeEEEeeeeeeCC-C-cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCc
Confidence 8889999999999999 3 355666777777787766655 47889999999999999999875 5789999999999
Q ss_pred CHHHHHHHHHHHhCCC
Q 022578 222 TFDGLARACAKVTGLL 237 (295)
Q Consensus 222 t~~e~~~~i~~~~g~~ 237 (295)
|+.|+++.+.+.+|.+
T Consensus 225 s~~e~~~~i~~~~g~~ 240 (292)
T 1vl0_A 225 SWYDFAVEIFRLTGID 240 (292)
T ss_dssp EHHHHHHHHHHHHCCC
T ss_pred cHHHHHHHHHHHhCCC
Confidence 9999999999999987
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-33 Score=236.45 Aligned_cols=212 Identities=22% Similarity=0.316 Sum_probs=178.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|+. .+|++|.+++.+++++.++|+|||+|
T Consensus 9 tGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------~~D~~d~~~~~~~~~~~~~d~vih~a 63 (321)
T 1e6u_A 9 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA 63 (321)
T ss_dssp ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence 79999999999999999999999987652 15899999999999866899999999
Q ss_pred cCC-----------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC----CCCCC--ccchhhHHH
Q 022578 81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPK--SRHKGKLNT 135 (295)
Q Consensus 81 ~~~-----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~p~--~~~~~k~~~ 135 (295)
+.. +.++.++++++. ++++|||+||.++|+.....+++|++ +..|. .|..+|..+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 143 (321)
T 1e6u_A 64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG 143 (321)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHH
Confidence 863 346788999987 78899999999999987777888886 55553 345999999
Q ss_pred HHHhhh----cCCcEEEeccCeeecCCCC-----CchHHHHHHHHHc----C-CCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 136 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA----G-RPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 136 E~~~~~----~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
|++++. .+++++++||+.+|||+.. ..++..++..+.. | .++.++++++..++++|++|+|++++.
T Consensus 144 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~ 223 (321)
T 1e6u_A 144 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH 223 (321)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHH
Confidence 998864 5899999999999999864 2456667666654 3 566667888999999999999999999
Q ss_pred HhcCCCCC--------CceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 202 VLGNEKAS--------RQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 202 ~~~~~~~~--------~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++.++... +++||+++++.+|+.|+++.+.+.+|.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 267 (321)
T 1e6u_A 224 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK 267 (321)
T ss_dssp HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred HHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 99876542 5799999999999999999999999987
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-32 Score=234.01 Aligned_cols=230 Identities=20% Similarity=0.230 Sum_probs=188.3
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCc-cccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|++. |++|++++|.+.. ....+.. +. ...+++++.+|++|.+++.+++++.++|+|||
T Consensus 6 TGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD-----IS-ESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT-----TT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhh-----hh-cCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 799999999999999998 7999999997632 1111110 00 02478999999999999999997668999999
Q ss_pred cccC----------------ChhcHHHHHHhCC----CCC-------cEEEeeccccccCCCC--C--------CCCCCC
Q 022578 79 INGR----------------EADEVEPILDALP----NLE-------QFIYCSSAGVYLKSDL--L--------PHCETD 121 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~----~~~-------~~i~~Ss~~v~~~~~~--~--------~~~e~~ 121 (295)
+|+. |+.++.++++++. +++ +|||+||.++||.... . +++|+.
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence 9986 3456888999876 455 9999999999986542 1 778888
Q ss_pred CCCCCccc-hhhHHHHHHhhh----cCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 122 ~~~p~~~~-~~k~~~E~~~~~----~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
+..|.+.| .+|..+|.+++. .+++++++||+.+|||+.. ..++..++..+..++++.++++++..++++|++|+
T Consensus 160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 239 (361)
T 1kew_A 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (361)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence 77776665 999999998854 5899999999999999864 34566777778888888777888899999999999
Q ss_pred HHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 196 a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|++++.++.++ ..+++||+++++.+|+.|+++.+++.+|.+
T Consensus 240 a~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 280 (361)
T 1kew_A 240 ARALHMVVTEG-KAGETYNIGGHNEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp HHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-CCCCEEEecCCCeeeHHHHHHHHHHHhCCc
Confidence 99999999765 357899999999999999999999999865
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=236.64 Aligned_cols=221 Identities=20% Similarity=0.293 Sum_probs=179.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|++++|........... + ....+++++.+|+.+. .+. ++|+|||+|
T Consensus 33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~~~D~~~~-----~~~--~~d~vih~A 99 (343)
T 2b69_A 33 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH-----W-IGHENFELINHDVVEP-----LYI--EVDQIYHLA 99 (343)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG-----G-TTCTTEEEEECCTTSC-----CCC--CCSEEEECC
T ss_pred EcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhh-----h-ccCCceEEEeCccCCh-----hhc--CCCEEEECc
Confidence 79999999999999999999999999976542211110 0 0024789999999875 355 899999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCC-----CCCCCCccc-hhhHHHH
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTE 136 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~-----~~~~p~~~~-~~k~~~E 136 (295)
+. |..++.+++++|. +. +|||+||.++|+.....+++|+ .+..|.+.| .+|+.+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E 178 (343)
T 2b69_A 100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE 178 (343)
T ss_dssp SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHH
Confidence 85 3345888999987 65 9999999999998766677777 344555545 9999999
Q ss_pred HHhh----hcCCcEEEeccCeeecCCCC---CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 137 SVLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 137 ~~~~----~~~~~~~i~R~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
++++ +.+++++++||+.+|||+.. ...+..++..+..++++.+++++++.+++++++|+|++++.++..+.
T Consensus 179 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-- 256 (343)
T 2b69_A 179 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV-- 256 (343)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--
T ss_pred HHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC--
Confidence 9874 46899999999999999753 34566777777888888777888899999999999999999987643
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+|+.|+++.+++.+|.+
T Consensus 257 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 284 (343)
T 2b69_A 257 SSPVNLGNPEEHTILEFAQLIKNLVGSG 284 (343)
T ss_dssp CSCEEESCCCEEEHHHHHHHHHHHHTCC
T ss_pred CCeEEecCCCCCcHHHHHHHHHHHhCCC
Confidence 6799999999999999999999999987
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=234.26 Aligned_cols=231 Identities=17% Similarity=0.164 Sum_probs=185.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-----ccCCeEEEEecCCChHHHHHhhhcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~~~~~~~~~d~ 75 (295)
|||+||||++++++|+++|++|++++|++........ ..+.. ...+++++.+|++|++++.++++..++|+
T Consensus 30 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 105 (375)
T 1t2a_A 30 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI----EHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTE 105 (375)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTT----GGGC---------CEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhH----HHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCE
Confidence 7999999999999999999999999998764211000 00000 12478999999999999999998556899
Q ss_pred EEEcccC----------------ChhcHHHHHHhCC--CC---CcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhH
Q 022578 76 VYDINGR----------------EADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL 133 (295)
Q Consensus 76 vi~~a~~----------------~~~~~~~ll~~~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~ 133 (295)
|||+|+. |..++.++++++. ++ ++|||+||.++|+.....+++|+++..|.+.| .+|+
T Consensus 106 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~ 185 (375)
T 1t2a_A 106 IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKL 185 (375)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred EEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHH
Confidence 9999986 3346788999987 55 79999999999998777788999888777665 9999
Q ss_pred HHHHHhhh----cCCcEEEeccCeeecCCCCCch----HHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 134 NTESVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 134 ~~E~~~~~----~~~~~~i~R~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
.+|.+++. .+++++++||+.+|||+....+ +..++..+..|.. ...++++++.++++|++|+|++++.+++
T Consensus 186 ~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~ 265 (375)
T 1t2a_A 186 YAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQ 265 (375)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHh
Confidence 99998753 5899999999999999764332 2344555556653 3345788899999999999999999998
Q ss_pred CCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 205 NEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++. +++||+++++.+|+.|+++.+++.+|.+
T Consensus 266 ~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 266 NDE--PEDFVIATGEVHSVREFVEKSFLHIGKT 296 (375)
T ss_dssp SSS--CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred cCC--CceEEEeCCCcccHHHHHHHHHHHhCCC
Confidence 754 4799999999999999999999999987
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=236.20 Aligned_cols=232 Identities=22% Similarity=0.294 Sum_probs=179.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++|++|++++|......... ..+... ..+++++.+|++|++++.++++..++|+|||+
T Consensus 6 TGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVL-----PVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHH-----HHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHH-----HHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 799999999999999999999999987643311100 011111 24688999999999999999985579999999
Q ss_pred ccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC-Cc-cchhhHHHHHHh
Q 022578 80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KS-RHKGKLNTESVL 139 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~-~~~~k~~~E~~~ 139 (295)
|+. |..++.+++++++ ++++||++||.++|+.....+++|+.+..| .+ |..+|+.+|+++
T Consensus 81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~ 160 (338)
T 1udb_A 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence 985 3456788999887 788999999999999877778888877654 44 449999999987
Q ss_pred hh----c-CCcEEEeccCeeecCCC-----------CCchHHHHHHHHH-cCCCcccCC------CCCceeeeeeHHHHH
Q 022578 140 ES----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDLA 196 (295)
Q Consensus 140 ~~----~-~~~~~i~R~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~a 196 (295)
+. . +++++++||+++|||+. ...+...+..... .+..+.+++ ++++.++++|++|+|
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva 240 (338)
T 1udb_A 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240 (338)
T ss_dssp HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence 53 3 79999999999999842 1234455554444 334444333 567889999999999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++++.++.+. ...+++||+++++.+|+.|+++.+++.+|.+
T Consensus 241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~ 283 (338)
T 1udb_A 241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSC
T ss_pred HHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCC
Confidence 9999988753 2223799999999999999999999999976
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=235.03 Aligned_cols=214 Identities=20% Similarity=0.187 Sum_probs=165.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|++.. ++ ++.+|++|++++.++++..++|+|||+|
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A 68 (315)
T 2ydy_A 8 TGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA 68 (315)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CHHHHHHHCCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence 7999999999999999999999999987543 12 7789999999999999844699999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhh
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~ 141 (295)
+. |+.++.++++++. +. +|||+||.++|+. ...+++|+++..|.+.| .+|..+|++++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 146 (315)
T 2ydy_A 69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLE 146 (315)
T ss_dssp -------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 85 4557899999987 65 9999999999988 56678898888777766 999999999999
Q ss_pred cCCcEEEeccCeeecCCCCC--chHHHHHHHHH-cCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC---CCCCceEEe
Q 022578 142 KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVFNI 215 (295)
Q Consensus 142 ~~~~~~i~R~~~i~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~---~~~~~~~~i 215 (295)
.+.+++++||+.+|||.... .++..++..+. .+.++.+. ++..+++++++|+|++++.++.++ ...+++||+
T Consensus 147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i 224 (315)
T 2ydy_A 147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW 224 (315)
T ss_dssp HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence 99999999999999997641 34455666666 67666543 357789999999999999998753 345789999
Q ss_pred cCCcccCHHHHHHHHHHHhCCC
Q 022578 216 SGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 216 ~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++++.+|+.|+++.+++.+|.+
T Consensus 225 ~~~~~~s~~e~~~~i~~~~g~~ 246 (315)
T 2ydy_A 225 SGNEQMTKYEMACAIADAFNLP 246 (315)
T ss_dssp CCSCCBCHHHHHHHHHHHTTCC
T ss_pred cCCCcccHHHHHHHHHHHhCCC
Confidence 9999999999999999999987
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-32 Score=228.19 Aligned_cols=207 Identities=22% Similarity=0.262 Sum_probs=167.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++||+|++++|++.. ..+ ..| +.....++ ++|+|||++
T Consensus 6 TGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------~~~---~~~----~~~~~~l~--~~d~vihla 59 (298)
T 4b4o_A 6 GGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------GRI---TWD----ELAASGLP--SCDAAVNLA 59 (298)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------TEE---EHH----HHHHHCCC--SCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------Cee---ecc----hhhHhhcc--CCCEEEEec
Confidence 7999999999999999999999999998655 112 122 33345666 999999998
Q ss_pred cC--------------------ChhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHH
Q 022578 81 GR--------------------EADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT 135 (295)
Q Consensus 81 ~~--------------------~~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~ 135 (295)
+. |+.++++++++++ +..+||+.||.++||.....+.+|+.+..|.+++ ..+...
T Consensus 60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~ 139 (298)
T 4b4o_A 60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKW 139 (298)
T ss_dssp CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHH
T ss_pred cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHH
Confidence 74 2345778888765 4556999999999999988999999998887765 555555
Q ss_pred HHH--hhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceE
Q 022578 136 ESV--LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213 (295)
Q Consensus 136 E~~--~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~ 213 (295)
|.. ....+++++++||+.+|||+. .....+......+.... ++++++.+++||++|+|+++..+++++.. +++|
T Consensus 140 e~~~~~~~~~~~~~~~r~~~v~g~~~--~~~~~~~~~~~~~~~~~-~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~y 215 (298)
T 4b4o_A 140 EAAARLPGDSTRQVVVRSGVVLGRGG--GAMGHMLLPFRLGLGGP-IGSGHQFFPWIHIGDLAGILTHALEANHV-HGVL 215 (298)
T ss_dssp HHHHCCSSSSSEEEEEEECEEECTTS--HHHHHHHHHHHTTCCCC-BTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred HHHHHhhccCCceeeeeeeeEEcCCC--CchhHHHHHHhcCCcce-ecccCceeecCcHHHHHHHHHHHHhCCCC-CCeE
Confidence 544 356789999999999999964 44555666666665544 48999999999999999999999998765 4599
Q ss_pred EecCCcccCHHHHHHHHHHHhCCC
Q 022578 214 NISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 214 ~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|+++++++|+.|+++.+++.+|++
T Consensus 216 n~~~~~~~t~~e~~~~ia~~lgrp 239 (298)
T 4b4o_A 216 NGVAPSSATNAEFAQTFGAALGRR 239 (298)
T ss_dssp EESCSCCCBHHHHHHHHHHHHTCC
T ss_pred EEECCCccCHHHHHHHHHHHhCcC
Confidence 999999999999999999999987
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-31 Score=233.83 Aligned_cols=234 Identities=20% Similarity=0.183 Sum_probs=182.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++|++|++++|++.... ..+... .........+++++.+|++|++++.++++..++|+|||+
T Consensus 7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 85 (372)
T 1db3_A 7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHI-YQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL 85 (372)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHH-hhccccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 799999999999999999999999999865421 111100 000000124788999999999999999985568999999
Q ss_pred ccC----------------ChhcHHHHHHhCC--CC---CcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 80 NGR----------------EADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
|+. |..++.++++++. ++ ++||++||.++|+.....+++|+.+..|.+.| .+|..+|.
T Consensus 86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 165 (372)
T 1db3_A 86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW 165 (372)
T ss_dssp CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred CcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHH
Confidence 985 2346888999887 55 79999999999998777788999888777766 99999999
Q ss_pred Hhh----hcCCcEEEeccCeeecCCCCCch----HHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 022578 138 VLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 138 ~~~----~~~~~~~i~R~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
+++ +.+++++++|++.+|||+....+ +..++..+..|+. ...++++++.++++|++|+|++++.++.++.
T Consensus 166 ~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~- 244 (372)
T 1db3_A 166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ- 244 (372)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-
T ss_pred HHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-
Confidence 874 35899999999999999764322 3445556666763 3445888899999999999999999998754
Q ss_pred CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 209 SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 209 ~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 245 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 272 (372)
T 1db3_A 245 -PEDFVIATGVQYSVRQFVEMAAAQLGIK 272 (372)
T ss_dssp -CCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred -CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence 4799999999999999999999999976
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-31 Score=232.06 Aligned_cols=233 Identities=17% Similarity=0.155 Sum_probs=183.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCcccc-CCCCCCchhhhhccC-CeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++|++|++++|++..... .+.. .......... +++++.+|++|.+++.++++..++|+|||
T Consensus 34 tGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 112 (381)
T 1n7h_A 34 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINH-IYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYN 112 (381)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTT-TC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhh-hhhccccccccceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 7999999999999999999999999998765211 1110 0000000012 78999999999999999998556899999
Q ss_pred cccC----------------ChhcHHHHHHhCC--CCC-----cEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHH
Q 022578 79 INGR----------------EADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN 134 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~ 134 (295)
+|+. |+.++.++++++. +++ +|||+||.++||.... +++|+++..|.+.| .+|+.
T Consensus 113 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~sK~~ 191 (381)
T 1n7h_A 113 LAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCA 191 (381)
T ss_dssp CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHHHHHH
T ss_pred CCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHHHHHH
Confidence 9986 3346888999887 444 9999999999998766 88998888877765 99999
Q ss_pred HHHHhhh----cCCcEEEeccCeeecCCCCCch----HHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 135 TESVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 135 ~E~~~~~----~~~~~~i~R~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
+|.+++. .+++++++|++.+|||+....+ +..++..+..+.. ...+++++..++++|++|+|++++.++.+
T Consensus 192 ~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~ 271 (381)
T 1n7h_A 192 AHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ 271 (381)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence 9998853 4899999999999999864332 2334455556653 33457888999999999999999999987
Q ss_pred CCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 206 EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 206 ~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+. +++||+++++.+|+.|+++.+.+.+|.+
T Consensus 272 ~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 272 EK--PDDYVVATEEGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp SS--CCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred CC--CCeEEeeCCCCCcHHHHHHHHHHHcCCC
Confidence 54 4799999999999999999999999976
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.8e-31 Score=227.63 Aligned_cols=228 Identities=19% Similarity=0.200 Sum_probs=184.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++|++|++++|++..... ..+... ..+++++.+|++|++++.++++..++|+|||
T Consensus 9 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 9 TGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-------WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-------HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-------ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 7999999999999999999999999998765211 011111 1468999999999999999998556899999
Q ss_pred cccC----------------ChhcHHHHHHhCC--CC-CcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHH
Q 022578 79 INGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~ 138 (295)
+|+. |+.++.++++++. ++ ++|||+||.++||.....+++|+.+..|.+.| .+|..+|.+
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 161 (345)
T 2z1m_A 82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI 161 (345)
T ss_dssp CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence 9985 3446888999987 65 89999999999998777788888887777655 999999998
Q ss_pred hhh----cCCcEEEeccCeeecCCCCCch----HHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 139 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 139 ~~~----~~~~~~i~R~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
++. .+++++++|+.++|||+..... +..++..+..+.. ...+++++..++++|++|+|++++.++.++.
T Consensus 162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-- 239 (345)
T 2z1m_A 162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE-- 239 (345)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--
T ss_pred HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence 753 4899999999999999864322 2233444556653 2345777888999999999999999998754
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++||+++++.+|+.|+++.+++.+|.+
T Consensus 240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 240 PDDYVIATGETHTVREFVEKAAKIAGFD 267 (345)
T ss_dssp CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred CceEEEeCCCCccHHHHHHHHHHHhCCC
Confidence 4799999999999999999999999987
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-31 Score=224.16 Aligned_cols=219 Identities=16% Similarity=0.113 Sum_probs=176.5
Q ss_pred CCcCCcchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++ |++|++++|++... .+++++.+|++|++++.++++..++|+|||
T Consensus 5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 5 TGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp ESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred EcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence 799999999999999998 89999999876541 246789999999999999998678999999
Q ss_pred cccC---------------ChhcHHHHHHhCC--CCCcEEEeeccccccCC-CCCCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 79 INGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 79 ~a~~---------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
+|+. |+.++.++++++. ++++|||+||.++|+.. ...+.+|+.+..|.+.| .+|..+|.++
T Consensus 69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~ 148 (317)
T 3ajr_A 69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLG 148 (317)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred CCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHH
Confidence 9985 3346889999987 78899999999999874 34566777777777665 9999999987
Q ss_pred h----hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC--
Q 022578 140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-- 208 (295)
Q Consensus 140 ~----~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~-- 208 (295)
+ +.+++++++||+.+||+... ......++.....+..+..+++++..++++|++|+|++++.++.++..
T Consensus 149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~ 228 (317)
T 3ajr_A 149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228 (317)
T ss_dssp HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC
T ss_pred HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccc
Confidence 4 45899999999999997531 122222333334445555567778899999999999999999987643
Q ss_pred -CCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 209 -SRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 209 -~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
.+++||+++ ..+|+.|+++.+.+.+|.
T Consensus 229 ~~g~~~~i~~-~~~s~~e~~~~i~~~~~~ 256 (317)
T 3ajr_A 229 VLRNGYNVTA-YTFTPSELYSKIKERIPE 256 (317)
T ss_dssp SSCSCEECCS-EEECHHHHHHHHHTTCCS
T ss_pred ccCceEecCC-ccccHHHHHHHHHHHCCc
Confidence 357999987 579999999999999884
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=246.09 Aligned_cols=224 Identities=20% Similarity=0.237 Sum_probs=186.6
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHH-HHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++ |++|++++|++........ ..+++++.+|++|.++ +.++++ ++|+|||
T Consensus 321 TGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih 388 (660)
T 1z7e_A 321 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP 388 (660)
T ss_dssp ETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT----------CTTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred EcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc----------CCceEEEECCCCCcHHHHHHhhc--CCCEEEE
Confidence 799999999999999998 8999999998765322211 2579999999999765 778888 8999999
Q ss_pred cccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCC-------CCCc-cchhh
Q 022578 79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKS-RHKGK 132 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~p~~-~~~~k 132 (295)
+|+. |+.++.++++++. + ++|||+||.++|+.....+++|+++. .|.+ |..+|
T Consensus 389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK 467 (660)
T 1z7e_A 389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK 467 (660)
T ss_dssp CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence 9885 2446889999987 6 89999999999998777778887752 2333 44999
Q ss_pred HHHHHHhh----hcCCcEEEeccCeeecCCCC---------CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 133 ~~~E~~~~----~~~~~~~i~R~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
+.+|.+++ +.+++++++||+++|||+.. ...+..++..+..+.++.+++++++.++++|++|+|+++
T Consensus 468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai 547 (660)
T 1z7e_A 468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547 (660)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence 99999884 46899999999999999863 345667778888888887778888999999999999999
Q ss_pred HHHhcCCC--CCCceEEecCCc-ccCHHHHHHHHHHHhCCC
Q 022578 200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGLL 237 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~-~~t~~e~~~~i~~~~g~~ 237 (295)
+.++.++. ..+++||+++++ .+|+.|+++.+.+.+|.+
T Consensus 548 ~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T 1z7e_A 548 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH 588 (660)
T ss_dssp HHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHC
T ss_pred HHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCC
Confidence 99998754 357899999986 899999999999999875
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=226.25 Aligned_cols=213 Identities=18% Similarity=0.186 Sum_probs=173.1
Q ss_pred CCcCCcchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
||||||||++++++|+++ |++|++++|++.+... +. ..+++++.+|++|++++.++++ ++|+|||
T Consensus 6 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~ 72 (287)
T 2jl1_A 6 TGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST---------LA--DQGVEVRHGDYNQPESLQKAFA--GVSKLLF 72 (287)
T ss_dssp TTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH---------HH--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred EcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH---------Hh--hcCCeEEEeccCCHHHHHHHHh--cCCEEEE
Confidence 799999999999999998 9999999998755211 11 1478999999999999999999 9999999
Q ss_pred cccC------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEec
Q 022578 79 INGR------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR 150 (295)
Q Consensus 79 ~a~~------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R 150 (295)
+++. |..++.+++++|+ ++++|||+||.++|. .|..|..+|..+|+++++.+++++++|
T Consensus 73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~~K~~~E~~~~~~~~~~~ilr 139 (287)
T 2jl1_A 73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-------------SIIPLAHVHLATEYAIRTTNIPYTFLR 139 (287)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-------------CCSTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CCCchHHHHHHHHHHHHHcCCCeEEEE
Confidence 9986 5678999999987 888999999998862 123566999999999999999999999
Q ss_pred cCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHH
Q 022578 151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230 (295)
Q Consensus 151 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i 230 (295)
|+.++|+... .++ ......+... . +.++..+++++++|+|++++.++.++...+++||+++++.+|+.|+++.+
T Consensus 140 p~~~~~~~~~-~~~---~~~~~~~~~~-~-~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i 213 (287)
T 2jl1_A 140 NALYTDFFVN-EGL---RASTESGAIV-T-NAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQIL 213 (287)
T ss_dssp ECCBHHHHSS-GGG---HHHHHHTEEE-E-SCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHH
T ss_pred CCEeccccch-hhH---HHHhhCCcee-c-cCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHH
Confidence 9998886421 112 2222334332 2 44667889999999999999999876566789999999999999999999
Q ss_pred HHHhCCCCCCCCcccccCC
Q 022578 231 AKVTGLLDFRSLNLCTTTP 249 (295)
Q Consensus 231 ~~~~g~~~~~~~~~~~~~~ 249 (295)
++.+|.+ ..+...+.
T Consensus 214 ~~~~g~~----~~~~~~~~ 228 (287)
T 2jl1_A 214 SEVSGKK----VVHQPVSF 228 (287)
T ss_dssp HHHHSSC----CEEEECCH
T ss_pred HHHHCCc----ceEEeCCH
Confidence 9999987 44444443
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=216.04 Aligned_cols=201 Identities=20% Similarity=0.194 Sum_probs=161.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|+||++++++|+++|++|++++|++++.... ..+++++.+|++|++++.++++ ++|+|||++
T Consensus 10 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a 75 (227)
T 3dhn_A 10 IGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------------NEHLKVKKADVSSLDEVCEVCK--GADAVISAF 75 (227)
T ss_dssp ETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------------CTTEEEECCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------------cCceEEEEecCCCHHHHHHHhc--CCCEEEEeC
Confidence 69999999999999999999999999998774321 1579999999999999999999 999999999
Q ss_pred cC----------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHh---h-hcC
Q 022578 81 GR----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL---E-SKG 143 (295)
Q Consensus 81 ~~----------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~---~-~~~ 143 (295)
+. |..++.+++++++ ++++|||+||.++|+...+. ..|+.+..|.+.| .+|..+|.++ . +.+
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~ 154 (227)
T 3dhn_A 76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGEFYLNFLMKEKE 154 (227)
T ss_dssp CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCS
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHHHHHHHHhhccC
Confidence 87 4668999999988 88899999999988665433 3455566676666 9999999554 3 678
Q ss_pred CcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCH
Q 022578 144 VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTF 223 (295)
Q Consensus 144 ~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~ 223 (295)
++++++||+.+|||+...... ..+....++. ++. +++++++|+|++++.++.++...+++|+++++++.++
T Consensus 155 ~~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~ 225 (227)
T 3dhn_A 155 IDWVFFSPAADMRPGVRTGRY-------RLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHH 225 (227)
T ss_dssp SEEEEEECCSEEESCCCCCCC-------EEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC-
T ss_pred ccEEEEeCCcccCCCccccce-------eecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhccc
Confidence 999999999999997643211 1233333322 222 7999999999999999999988999999999999887
Q ss_pred HH
Q 022578 224 DG 225 (295)
Q Consensus 224 ~e 225 (295)
.+
T Consensus 226 ~~ 227 (227)
T 3dhn_A 226 HH 227 (227)
T ss_dssp --
T ss_pred CC
Confidence 53
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=222.18 Aligned_cols=224 Identities=16% Similarity=0.126 Sum_probs=184.3
Q ss_pred CCcCCcchHHHHHHHHHCC-------CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 73 (295)
|||+||||++++++|+++| ++|++++|.+....... ..+++++.+|++|++++.++++ .++
T Consensus 20 tGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-~~~ 87 (342)
T 2hrz_A 20 IGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF-----------SGAVDARAADLSAPGEAEKLVE-ARP 87 (342)
T ss_dssp ETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTC-----------CSEEEEEECCTTSTTHHHHHHH-TCC
T ss_pred ECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccccc-----------CCceeEEEcCCCCHHHHHHHHh-cCC
Confidence 7999999999999999999 89999999875422111 2578999999999999999884 389
Q ss_pred cEEEEcccC---------------ChhcHHHHHHhCC--C-----CCcEEEeeccccccCCCCCCCCCCCCCCCCccc-h
Q 022578 74 DVVYDINGR---------------EADEVEPILDALP--N-----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K 130 (295)
Q Consensus 74 d~vi~~a~~---------------~~~~~~~ll~~~~--~-----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~ 130 (295)
|+|||+|+. |+.++.++++++. + +++||++||.++|+.....+++|+++..|.+.| .
T Consensus 88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~ 167 (342)
T 2hrz_A 88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGT 167 (342)
T ss_dssp SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHH
T ss_pred CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHH
Confidence 999999986 3456888999887 5 789999999999987656788999988887766 9
Q ss_pred hhHHHHHHhhh----cCCcEEEeccCeeec-CCCC----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 131 GKLNTESVLES----KGVNWTSLRPVYIYG-PLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 131 ~k~~~E~~~~~----~~~~~~i~R~~~i~g-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
+|..+|++++. .+++++++|++.+|| |+.. ..++..++.....+++..++++++...++++++|+|++++.
T Consensus 168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~ 247 (342)
T 2hrz_A 168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH 247 (342)
T ss_dssp HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHH
Confidence 99999998754 378999999999998 6642 23456677777788876666666778889999999999999
Q ss_pred HhcCCCC---CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 202 VLGNEKA---SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 202 ~~~~~~~---~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++..+.. .+++||++ ++.+|+.|+++.+.+.+|.+
T Consensus 248 ~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~ 285 (342)
T 2hrz_A 248 GAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEK 285 (342)
T ss_dssp HHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHH
T ss_pred HHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcc
Confidence 9987542 46799996 47799999999999999976
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=222.66 Aligned_cols=212 Identities=19% Similarity=0.211 Sum_probs=169.6
Q ss_pred CCcCCcchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+|+||++++++|+++ |++|++++|++.+... +. ..+++++.+|++|++++.++++ ++|+|||
T Consensus 5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------~~--~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 71 (286)
T 2zcu_A 5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA---------LA--AQGITVRQADYGDEAALTSALQ--GVEKLLL 71 (286)
T ss_dssp ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH---------HH--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh---------hh--cCCCeEEEcCCCCHHHHHHHHh--CCCEEEE
Confidence 799999999999999998 9999999998765211 01 1478999999999999999999 9999999
Q ss_pred cccC----ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEeccC
Q 022578 79 INGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPV 152 (295)
Q Consensus 79 ~a~~----~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R~~ 152 (295)
+++. +..++++++++|+ ++++||++||.++|. .|..|..+|..+|+++++.+++++++||+
T Consensus 72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~sK~~~e~~~~~~~~~~~ilrp~ 138 (286)
T 2zcu_A 72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SPLGLADEHIETEKMLADSGIVYTLLRNG 138 (286)
T ss_dssp CC--------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CCSTTHHHHHHHHHHHHHHCSEEEEEEEC
T ss_pred eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CcchhHHHHHHHHHHHHHcCCCeEEEeCh
Confidence 9985 4578999999987 889999999998861 13356699999999999999999999998
Q ss_pred eeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHH
Q 022578 153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAK 232 (295)
Q Consensus 153 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~ 232 (295)
.++++.. . ++.....+..+. .+.++..+++++++|+|++++.++.++...+++||+++++.+|+.|+++.+++
T Consensus 139 ~~~~~~~-----~-~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~ 211 (286)
T 2zcu_A 139 WYSENYL-----A-SAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTK 211 (286)
T ss_dssp CBHHHHH-----T-THHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHH
T ss_pred HHhhhhH-----H-HhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHH
Confidence 8766521 1 122222223333 35567889999999999999999988656688999999989999999999999
Q ss_pred HhCCCCCCCCcccccCC
Q 022578 233 VTGLLDFRSLNLCTTTP 249 (295)
Q Consensus 233 ~~g~~~~~~~~~~~~~~ 249 (295)
.+|.+ ..+.+.+.
T Consensus 212 ~~g~~----~~~~~~~~ 224 (286)
T 2zcu_A 212 QSGKQ----VTYQNLSE 224 (286)
T ss_dssp HHSSC----CEEEECCH
T ss_pred HHCCC----CceeeCCH
Confidence 99987 44444443
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=217.60 Aligned_cols=215 Identities=15% Similarity=0.186 Sum_probs=170.7
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||||+||++++++|++. |++|++++|++++..... ..+++++.+|++|++++.++++ ++|+|||+
T Consensus 6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-----------~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~ 72 (289)
T 3e48_A 6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-----------RGKVSVRQLDYFNQESMVEAFK--GMDTVVFI 72 (289)
T ss_dssp ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-----------BTTBEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-----------hCCCEEEEcCCCCHHHHHHHHh--CCCEEEEe
Confidence 799999999999999998 999999999987633221 2589999999999999999999 99999999
Q ss_pred ccC------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEecc
Q 022578 80 NGR------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP 151 (295)
Q Consensus 80 a~~------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R~ 151 (295)
++. +..++++++++|+ ++++|||+||.+. .. ..|......+..+|+.+++.+++++++||
T Consensus 73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~---------~~~~~~~~~~~~~e~~~~~~g~~~~ilrp 140 (289)
T 3e48_A 73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QH---------NNPFHMSPYFGYASRLLSTSGIDYTYVRM 140 (289)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---ST---------TCCSTTHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CC---------CCCCccchhHHHHHHHHHHcCCCEEEEec
Confidence 986 3467899999988 8899999999542 11 11222223445788888999999999999
Q ss_pred CeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHH
Q 022578 152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA 231 (295)
Q Consensus 152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~ 231 (295)
+.+||+. .. ++.....+.... .+.++..+++++++|+|++++.++.++...+++|+++ ++.+|+.|+++.++
T Consensus 141 ~~~~~~~-----~~-~~~~~~~~~~~~-~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~ 212 (289)
T 3e48_A 141 AMYMDPL-----KP-YLPELMNMHKLI-YPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILS 212 (289)
T ss_dssp CEESTTH-----HH-HHHHHHHHTEEC-CCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHH
T ss_pred ccccccc-----HH-HHHHHHHCCCEe-cCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHH
Confidence 9999972 22 333333333332 3567889999999999999999999876668899999 99999999999999
Q ss_pred HHhCCCCCCCCcccccCCccc
Q 022578 232 KVTGLLDFRSLNLCTTTPKSL 252 (295)
Q Consensus 232 ~~~g~~~~~~~~~~~~~~~~~ 252 (295)
+.+|++ ..+.+.+...+
T Consensus 213 ~~~g~~----~~~~~~~~~~~ 229 (289)
T 3e48_A 213 EASGTE----IKYEPVSLETF 229 (289)
T ss_dssp HHHTSC----CEECCCCHHHH
T ss_pred HHHCCc----eeEEeCCHHHH
Confidence 999987 55555554433
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=223.44 Aligned_cols=222 Identities=20% Similarity=0.231 Sum_probs=176.7
Q ss_pred CCcCCcchHHHHHHHHHCC-----CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCC-Cc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~-~d 74 (295)
|||+||||++++++|+++| ++|++++|++.... .. ..+++++.+|++|++++.++++..+ +|
T Consensus 7 tGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~d 74 (364)
T 2v6g_A 7 VGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HE----------DNPINYVQCDISDPDDSQAKLSPLTDVT 74 (364)
T ss_dssp ETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CC----------SSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred ECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cc----------cCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence 7999999999999999999 99999999877632 11 1578999999999999999998333 99
Q ss_pred EEEEcccC-----------ChhcHHHHHHhCC----CCCcEE-------EeeccccccCC--CCCCCCCCCCCCC-Cccc
Q 022578 75 VVYDINGR-----------EADEVEPILDALP----NLEQFI-------YCSSAGVYLKS--DLLPHCETDTVDP-KSRH 129 (295)
Q Consensus 75 ~vi~~a~~-----------~~~~~~~ll~~~~----~~~~~i-------~~Ss~~v~~~~--~~~~~~e~~~~~p-~~~~ 129 (295)
+|||+|+. |+.++.+++++|. ++++|| |+||.++||.. ...+++|+++..| ...|
T Consensus 75 ~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y 154 (364)
T 2v6g_A 75 HVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY 154 (364)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred EEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh
Confidence 99999985 4567899999987 478887 89999999875 3467888877655 2233
Q ss_pred hhhHHHHHHhh----hcC-CcEEEeccCeeecCCCCC--c-hHHH-HHHHH--HcCCCcccCCCCC---ceeeeeeHHHH
Q 022578 130 KGKLNTESVLE----SKG-VNWTSLRPVYIYGPLNYN--P-VEEW-FFHRL--KAGRPIPIPGSGI---QVTQLGHVKDL 195 (295)
Q Consensus 130 ~~k~~~E~~~~----~~~-~~~~i~R~~~i~g~~~~~--~-~~~~-~~~~~--~~~~~~~~~~~~~---~~~~~i~~~D~ 195 (295)
..+|++++ ..+ ++++++||+.+|||+... . .... ++..+ ..|.++.++++++ ...++++++|+
T Consensus 155 ---~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dv 231 (364)
T 2v6g_A 155 ---YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI 231 (364)
T ss_dssp ---HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHH
T ss_pred ---HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHH
Confidence 34566553 355 999999999999997642 2 2333 34444 3677777777773 44788999999
Q ss_pred HHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 196 a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|++++.++.++...+++||+++++.+|+.|+++.+++.+|.+
T Consensus 232 a~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~ 273 (364)
T 2v6g_A 232 AEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVE 273 (364)
T ss_dssp HHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCC
Confidence 999999998865567899999999999999999999999987
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=225.62 Aligned_cols=232 Identities=16% Similarity=0.198 Sum_probs=181.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||||+||++|+++|++.|++|++++|++....... ..+.. ...+++++.+|++|.+++.+++++.++|+|||+
T Consensus 16 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-----~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~ 90 (346)
T 3i6i_A 16 AGATGFIGQFVATASLDAHRPTYILARPGPRSPSKA-----KIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST 90 (346)
T ss_dssp ECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH-----HHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred ECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHH-----HHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence 799999999999999999999999999874311110 00001 126899999999999999999998899999999
Q ss_pred ccC-ChhcHHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc-chhhHHHHHHhhhcCCcEEEeccCee
Q 022578 80 NGR-EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYI 154 (295)
Q Consensus 80 a~~-~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~-~~~k~~~E~~~~~~~~~~~i~R~~~i 154 (295)
++. |..++.+++++|+ + +++||+ | +||. +.+|..+..|... +.+|..+|+++++.+++++++|||.+
T Consensus 91 a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~ 162 (346)
T 3i6i_A 91 VGGESILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSI 162 (346)
T ss_dssp CCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEE
T ss_pred CchhhHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEeccc
Confidence 987 7889999999998 7 888886 4 3442 3455555566554 49999999999999999999999999
Q ss_pred ecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecC-CcccCHHHHHHHHHHH
Q 022578 155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKV 233 (295)
Q Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~-~~~~t~~e~~~~i~~~ 233 (295)
+|....... . .......+..+.++++++..+++++++|+|++++.++.++...++.|++++ ++.+|+.|+++.+++.
T Consensus 163 ~g~~~~~~~-~-~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~ 240 (346)
T 3i6i_A 163 ASWPYYNNI-H-PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKK 240 (346)
T ss_dssp SSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHH
T ss_pred ccccCcccc-c-cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHH
Confidence 997542211 1 111112455567788999999999999999999999998777788999986 4789999999999999
Q ss_pred hCCCCCCCCcccccCCcc
Q 022578 234 TGLLDFRSLNLCTTTPKS 251 (295)
Q Consensus 234 ~g~~~~~~~~~~~~~~~~ 251 (295)
+|.+ ..+...+...
T Consensus 241 ~g~~----~~~~~~~~~~ 254 (346)
T 3i6i_A 241 IGRT----LPRVTVTEDD 254 (346)
T ss_dssp HTSC----CCEEEECHHH
T ss_pred HCCC----CceEecCHHH
Confidence 9988 4555555443
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=224.22 Aligned_cols=228 Identities=13% Similarity=0.075 Sum_probs=176.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEE-EecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~-~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++++++|+++|++|++++|+..+..... ..+.. ...+++++ .+|++|.+++.++++ ++|+|||
T Consensus 17 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih 89 (342)
T 1y1p_A 17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ-----KRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAH 89 (342)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEE
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHH-----HHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEEEE
Confidence 799999999999999999999999999865421100 00000 01468888 799999999999998 9999999
Q ss_pred cccC-------------ChhcHHHHHHhCC---CCCcEEEeeccccccCCC----CCCCCCCCC----------------
Q 022578 79 INGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETDT---------------- 122 (295)
Q Consensus 79 ~a~~-------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~----~~~~~e~~~---------------- 122 (295)
+|+. |+.++.++++++. ++++|||+||.++|+... +.+++|++.
T Consensus 90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~ 169 (342)
T 1y1p_A 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP 169 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence 9986 3457889999874 678999999999986432 246677652
Q ss_pred CCCCc-cchhhHHHHHHhhhc------CCcEEEeccCeeecCCCCC----chHHHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 123 VDPKS-RHKGKLNTESVLESK------GVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 123 ~~p~~-~~~~k~~~E~~~~~~------~~~~~i~R~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
..|.+ |..+|..+|.+++.. +++++++||+.+|||.... .....++..+..+++..+++++ ..++++|
T Consensus 170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~ 248 (342)
T 1y1p_A 170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVS 248 (342)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeE
Confidence 22333 449999999987532 7889999999999997532 2567778888888876655554 6789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 192 VKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++|+|++++.++.++...++.+ ++++..+|+.|+++.+.+.+|.+
T Consensus 249 v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 249 AVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence 9999999999998755555555 45567799999999999999864
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-30 Score=229.66 Aligned_cols=234 Identities=15% Similarity=0.133 Sum_probs=177.9
Q ss_pred CCcCCcchHHHHHHHHHC---CCeEEEEecCCCcccc------CCCCCCchh----hhhccCCeEEEEecCC------Ch
Q 022578 1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGKAPIAQ------QLPGESDQE----FAEFSSKILHLKGDRK------DY 61 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~------~~~~~~~~~----~~~~~~~v~~~~~D~~------~~ 61 (295)
|||+||||++++++|++. |++|++++|+...... .+....... ......+++++.+|++ +.
T Consensus 79 TGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~ 158 (478)
T 4dqv_A 79 TGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQ 158 (478)
T ss_dssp ECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCH
T ss_pred ECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCH
Confidence 799999999999999999 8999999998765210 000000000 0011258999999998 66
Q ss_pred HHHHHhhhcCCCcEEEEcccC------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCC-
Q 022578 62 DFVKSSLSAKGFDVVYDINGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK- 126 (295)
Q Consensus 62 ~~~~~~~~~~~~d~vi~~a~~------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~- 126 (295)
+.+..+++ ++|+|||+|+. |+.++.+++++|. ++++|||+||.++|+.....+++|+.+..|.
T Consensus 159 ~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~ 236 (478)
T 4dqv_A 159 PMWRRLAE--TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVIS 236 (478)
T ss_dssp HHHHHHHH--HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHC
T ss_pred HHHHHHHc--CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccC
Confidence 78999999 99999999986 5668999999987 7889999999999998777788887764332
Q ss_pred -----------ccchhhHHHHHHhhh----cCCcEEEeccCeeecCCCC------CchHHHHHHHHHc-CCC-cccCCC-
Q 022578 127 -----------SRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------NPVEEWFFHRLKA-GRP-IPIPGS- 182 (295)
Q Consensus 127 -----------~~~~~k~~~E~~~~~----~~~~~~i~R~~~i~g~~~~------~~~~~~~~~~~~~-~~~-~~~~~~- 182 (295)
.|..+|+.+|.+++. .+++++++|||+|||+... ..++..++..... |.. ..+++.
T Consensus 237 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~ 316 (478)
T 4dqv_A 237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPD 316 (478)
T ss_dssp CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCC
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccc
Confidence 255999999999864 5999999999999998541 2234444443333 331 111111
Q ss_pred -----CCceeeeeeHHHHHHHHHHHhcC----CCCCCceEEecCCcc--cCHHHHHHHHHHHhCCC
Q 022578 183 -----GIQVTQLGHVKDLARAFVQVLGN----EKASRQVFNISGEKY--VTFDGLARACAKVTGLL 237 (295)
Q Consensus 183 -----~~~~~~~i~~~D~a~~i~~~~~~----~~~~~~~~~i~~~~~--~t~~e~~~~i~~~~g~~ 237 (295)
++..++++|++|+|++++.++.+ +...+++||+++++. +|+.|+++.+.+. |.+
T Consensus 317 ~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~ 381 (478)
T 4dqv_A 317 SEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYP 381 (478)
T ss_dssp TTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCS
T ss_pred cccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCC
Confidence 26788999999999999999876 455678999999988 9999999999995 766
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=230.99 Aligned_cols=226 Identities=16% Similarity=0.181 Sum_probs=177.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh---------hhccCCeEEEEecCCChHHHHHhhhcC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---------AEFSSKILHLKGDRKDYDFVKSSLSAK 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~D~~~~~~~~~~~~~~ 71 (295)
|||+||||++++++|++.|++|++++|++........ ....+ .....+++++.+|++|++.+. .+.
T Consensus 75 TGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~-- 149 (427)
T 4f6c_A 75 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYK--LMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE-- 149 (427)
T ss_dssp ECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHH--HHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CSS--
T ss_pred ecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHH--HHHHHHHhccccccccccCceEEEeCCCCCcccCC-CcC--
Confidence 7999999999999999999999999999873110000 00000 112368999999999988877 555
Q ss_pred CCcEEEEcccC-------------ChhcHHHHHHhCC-CCCcEEEeeccccccC-----CCCCCCCCCCC---CCCCccc
Q 022578 72 GFDVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH 129 (295)
Q Consensus 72 ~~d~vi~~a~~-------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~---~~p~~~~ 129 (295)
++|+|||+|+. |+.++.++++++. ++++|||+||.++ |. ....+++|+++ ..|.+.|
T Consensus 150 ~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y 228 (427)
T 4f6c_A 150 NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPY 228 (427)
T ss_dssp CCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHH
T ss_pred CCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCch
Confidence 99999999986 5567899999988 8899999999999 54 23456778776 3355545
Q ss_pred -hhhHHHHHHhhh---cCCcEEEeccCeeecCCCCC--------chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 130 -KGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 130 -~~k~~~E~~~~~---~~~~~~i~R~~~i~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
.+|+.+|.+++. .|++++++|||.|||+.... ..+..++.....+..++. +.++..+++++++|+|+
T Consensus 229 ~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ 307 (427)
T 4f6c_A 229 TRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTAR 307 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHH
Confidence 999999999865 79999999999999997643 235566777777776654 34678899999999999
Q ss_pred HHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhC
Q 022578 198 AFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 198 ~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
+++.++.++. .+++||+++++.+++.|+++.+++ ++
T Consensus 308 ai~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 308 QIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KE 343 (427)
T ss_dssp HHHHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred HHHHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence 9999998876 788999999999999999999998 56
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=237.07 Aligned_cols=232 Identities=20% Similarity=0.242 Sum_probs=180.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++|++|++++|......... ..+.. ...+++++.+|++|++++.+++++.++|+|||+
T Consensus 17 TGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~ 91 (699)
T 1z45_A 17 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV-----ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 91 (699)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH-----HHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH-----HHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence 799999999999999999999999999765421100 00111 125788999999999999999986689999999
Q ss_pred ccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCC----CCCCCCCCCCCCCccc-hhhHHHH
Q 022578 80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTE 136 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~----~~~~~e~~~~~p~~~~-~~k~~~E 136 (295)
|+. |+.++.+++++|+ ++++||++||.++|+... ..+++|+.+..|.+.| .+|+.+|
T Consensus 92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E 171 (699)
T 1z45_A 92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE 171 (699)
T ss_dssp CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHH
Confidence 986 2356788999987 889999999999998642 2567788777776655 9999999
Q ss_pred HHhhh------cCCcEEEeccCeeecCCCC-----------CchHHHHHHHHH-cCCCcccCC------CCCceeeeeeH
Q 022578 137 SVLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHV 192 (295)
Q Consensus 137 ~~~~~------~~~~~~i~R~~~i~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~ 192 (295)
++++. .+++++++||+.+|||+.. ..++..+..... .+.++.+++ ++++.++++|+
T Consensus 172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 251 (699)
T 1z45_A 172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 251 (699)
T ss_dssp HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence 98854 5899999999999998521 233444443332 224555555 67889999999
Q ss_pred HHHHHHHHHHhcCC------CCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 193 KDLARAFVQVLGNE------KASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 193 ~D~a~~i~~~~~~~------~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+|+|++++.++... ...+++||+++++.+|+.|+++.+++.+|.+
T Consensus 252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~ 302 (699)
T 1z45_A 252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGID 302 (699)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCC
Confidence 99999999988642 2235799999999999999999999999987
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=233.27 Aligned_cols=226 Identities=16% Similarity=0.171 Sum_probs=178.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchh---------hhhccCCeEEEEecCCChHHHHHhhhcC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQE---------FAEFSSKILHLKGDRKDYDFVKSSLSAK 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 71 (295)
||||||||++|+++|++.|++|++++|++........ .... ......+++++.+|+++++.+. ++.
T Consensus 156 TGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~-- 230 (508)
T 4f6l_B 156 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYK--LMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE-- 230 (508)
T ss_dssp SCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHH--HHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSS--
T ss_pred ECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHH--HHHHHHHhcccccchhccCceEEEecCCcccccCC-Ccc--
Confidence 7999999999999999899999999999873110000 0000 0112368999999999987777 555
Q ss_pred CCcEEEEcccC-------------ChhcHHHHHHhCC-CCCcEEEeeccccccC-----CCCCCCCCCCCC---CCCccc
Q 022578 72 GFDVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDTV---DPKSRH 129 (295)
Q Consensus 72 ~~d~vi~~a~~-------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~~---~p~~~~ 129 (295)
++|+|||+|+. |+.++.+++++|. +.++|||+||.++ |. ....+++|+++. .|.+.|
T Consensus 231 ~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y 309 (508)
T 4f6l_B 231 NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPY 309 (508)
T ss_dssp CCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHH
T ss_pred CCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcH
Confidence 99999999985 5678999999988 7899999999999 43 234567777763 344444
Q ss_pred -hhhHHHHHHhhh---cCCcEEEeccCeeecCCCCCc--------hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 130 -KGKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 130 -~~k~~~E~~~~~---~~~~~~i~R~~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
.+|+.+|++++. .|++++|+||+.+||+..... .+..++.....+..++. +.++..+++++++|+|+
T Consensus 310 ~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ 388 (508)
T 4f6l_B 310 TRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTAR 388 (508)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHH
Confidence 999999999865 799999999999999975332 25566777766666654 45688999999999999
Q ss_pred HHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHh
Q 022578 198 AFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVT 234 (295)
Q Consensus 198 ~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~ 234 (295)
+++.++.++. .+++||+++++.+++.|+++.+++..
T Consensus 389 ai~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 389 QIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE 424 (508)
T ss_dssp HHHHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred HHHHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence 9999998876 68899999999999999999999754
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-30 Score=207.13 Aligned_cols=192 Identities=15% Similarity=0.173 Sum_probs=159.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-hHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+|+||++++++|+++|++|++++|++++.... .+++++.+|++| ++++.++++ ++|+|||+
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ 70 (219)
T 3dqp_A 6 VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------------NNVKAVHFDVDWTPEEMAKQLH--GMDAIINV 70 (219)
T ss_dssp ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------------TTEEEEECCTTSCHHHHHTTTT--TCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------------CCceEEEecccCCHHHHHHHHc--CCCEEEEC
Confidence 79999999999999999999999999998763221 579999999999 999999999 99999999
Q ss_pred ccC--------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc-chhhHHHHHHh-hhcCCcEE
Q 022578 80 NGR--------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVL-ESKGVNWT 147 (295)
Q Consensus 80 a~~--------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~-~~~k~~~E~~~-~~~~~~~~ 147 (295)
++. |..++.+++++++ ++++||++||.++++.. +..| .+..|... ..+|..+|+++ +..+++++
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ 146 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYLTKETNLDYT 146 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHHHhccCCcEE
Confidence 986 5677999999988 78899999998876532 2333 33333444 49999999999 88899999
Q ss_pred EeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHHHH
Q 022578 148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA 227 (295)
Q Consensus 148 i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~ 227 (295)
++||+.+||+...... .. ++..+++++++|+|++++.++.++...+++|++++++ .++.|++
T Consensus 147 ilrp~~v~g~~~~~~~--------------~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~ 208 (219)
T 3dqp_A 147 IIQPGALTEEEATGLI--------------DI---NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEAL 208 (219)
T ss_dssp EEEECSEECSCCCSEE--------------EE---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHH
T ss_pred EEeCceEecCCCCCcc--------------cc---CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHH
Confidence 9999999998543221 11 2567899999999999999999877778899998875 8999887
Q ss_pred HH
Q 022578 228 RA 229 (295)
Q Consensus 228 ~~ 229 (295)
+.
T Consensus 209 ~~ 210 (219)
T 3dqp_A 209 ES 210 (219)
T ss_dssp HT
T ss_pred HH
Confidence 53
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.8e-29 Score=206.70 Aligned_cols=204 Identities=20% Similarity=0.185 Sum_probs=171.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|+||++++++|++ |++|++++|++.. . .+ +.+|++|++++.++++..++|+|||+|
T Consensus 6 tGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~---------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a 65 (273)
T 2ggs_A 6 TGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q---------------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA 65 (273)
T ss_dssp ETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T---------------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C---------------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence 79999999999999994 8999999998743 0 12 789999999999999844599999999
Q ss_pred cCC----------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhh
Q 022578 81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES 141 (295)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~ 141 (295)
+.. ..++.++++++. +. +||++||.++|+...+ +++|+++..|.+.| .+|..+|.+++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~ 143 (273)
T 2ggs_A 66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ 143 (273)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC
T ss_pred cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC
Confidence 862 346888999987 54 9999999999987644 78888888776655 999999999987
Q ss_pred cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccc
Q 022578 142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221 (295)
Q Consensus 142 ~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~ 221 (295)
++++++||+.+||+ ..+...++.....+..+...++ .+++++++|+|++++.++.++. +++||+++ +.+
T Consensus 144 --~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~ 212 (273)
T 2ggs_A 144 --DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG-ERI 212 (273)
T ss_dssp --TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCE
T ss_pred --CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-Ccc
Confidence 88999999999983 3455566666777777665543 7899999999999999998753 45999999 999
Q ss_pred CHHHHHHHHHHHhCCC
Q 022578 222 TFDGLARACAKVTGLL 237 (295)
Q Consensus 222 t~~e~~~~i~~~~g~~ 237 (295)
|+.|+++.+.+.+|.+
T Consensus 213 s~~e~~~~~~~~~g~~ 228 (273)
T 2ggs_A 213 SRFELALKIKEKFNLP 228 (273)
T ss_dssp EHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHHhCCC
Confidence 9999999999999987
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=214.92 Aligned_cols=190 Identities=17% Similarity=0.177 Sum_probs=165.9
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||||||||++|+++|+++|+ +|++++|+ .|++++.++++ ++|+|||+
T Consensus 6 tGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------~d~~~l~~~~~--~~d~Vih~ 53 (369)
T 3st7_A 6 TGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------TKEEELESALL--KADFIVHL 53 (369)
T ss_dssp ETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------CCHHHHHHHHH--HCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------CCHHHHHHHhc--cCCEEEEC
Confidence 79999999999999999998 77776553 47888999999 89999999
Q ss_pred ccC------------ChhcHHHHHHhCC--CCC-cEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhh---
Q 022578 80 NGR------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLES--- 141 (295)
Q Consensus 80 a~~------------~~~~~~~ll~~~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~--- 141 (295)
|+. |..++.+++++++ +++ +|||+||.++|+ ...|..+|..+|+++++
T Consensus 54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------~~~Y~~sK~~~E~~~~~~~~ 119 (369)
T 3st7_A 54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------DNPYGESKLQGEQLLREYAE 119 (369)
T ss_dssp CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------CSHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------CCCchHHHHHHHHHHHHHHH
Confidence 985 5668999999988 666 999999999985 34466999999999865
Q ss_pred -cCCcEEEeccCeeecCCCC---CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC-CceEEec
Q 022578 142 -KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNIS 216 (295)
Q Consensus 142 -~~~~~~i~R~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~-~~~~~i~ 216 (295)
.+++++++||+++|||+.. +.++..++..+..+.++.+ ++++..++++|++|+|++++.++.++... +++||++
T Consensus 120 ~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~ 198 (369)
T 3st7_A 120 EYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVP 198 (369)
T ss_dssp HHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCS
T ss_pred HhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeC
Confidence 7999999999999999764 3578888888888888776 47889999999999999999999987654 7899999
Q ss_pred CCcccCHHHHHHHHHHHhCCC
Q 022578 217 GEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 217 ~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+++.+|+.|+++.+++.+|.+
T Consensus 199 ~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 199 NVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp CCEEEEHHHHHHHHHHHHHHH
T ss_pred CCCceeHHHHHHHHHHHhCCC
Confidence 999999999999999999876
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=230.50 Aligned_cols=209 Identities=14% Similarity=0.082 Sum_probs=164.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|++.|+++|++|++++|++.+. +.+.+|+.+. +..+++ ++|+|||+|
T Consensus 153 TGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-------------------~~v~~d~~~~--~~~~l~--~~D~Vih~A 209 (516)
T 3oh8_A 153 TGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-------------------GKRFWDPLNP--ASDLLD--GADVLVHLA 209 (516)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-------------------TCEECCTTSC--CTTTTT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-------------------cceeecccch--hHHhcC--CCCEEEECC
Confidence 79999999999999999999999999997762 1256677643 456777 999999999
Q ss_pred cC-----------------ChhcHHHHHHh-CC--CCCcEEEeecccccc-CCCCCCCCCCCCCCCCccc-hhhHHHHHH
Q 022578 81 GR-----------------EADEVEPILDA-LP--NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (295)
Q Consensus 81 ~~-----------------~~~~~~~ll~~-~~--~~~~~i~~Ss~~v~~-~~~~~~~~e~~~~~p~~~~-~~k~~~E~~ 138 (295)
+. |+.++.+++++ ++ ++++|||+||.++|| .....+++|+.+. |.++| ..|...|.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~ 288 (516)
T 3oh8_A 210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHA 288 (516)
T ss_dssp CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHT
T ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHH
Confidence 85 45568999998 44 788999999999999 5555678888877 45544 778877766
Q ss_pred h---hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEe
Q 022578 139 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI 215 (295)
Q Consensus 139 ~---~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i 215 (295)
+ +..|++++++||+.+|||+. ..+..+...+..+... .++++++.++++|++|+|++++.++.++.. ++.||+
T Consensus 289 ~~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~~-~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~ni 364 (516)
T 3oh8_A 289 TAPASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLGG-KFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPINA 364 (516)
T ss_dssp THHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---CC-CCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEEEE
T ss_pred HHHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCCc-ccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcEEE
Confidence 4 46799999999999999974 4555565555555543 458889999999999999999999988654 459999
Q ss_pred cCCcccCHHHHHHHHHHHhCCC
Q 022578 216 SGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 216 ~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++++.+|+.|+++.+++.+|.+
T Consensus 365 ~~~~~~s~~el~~~i~~~~g~~ 386 (516)
T 3oh8_A 365 VAPNPVSNADMTKILATSMHRP 386 (516)
T ss_dssp SCSCCEEHHHHHHHTTC-----
T ss_pred ECCCCCCHHHHHHHHHHHhCCC
Confidence 9999999999999999999987
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-29 Score=212.10 Aligned_cols=233 Identities=13% Similarity=0.132 Sum_probs=173.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||||++|++++++|+++|++|++++|+++...... ...+.. ...+++++.+|++|++++.++++ ++|+|||+
T Consensus 10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~ 83 (313)
T 1qyd_A 10 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA 83 (313)
T ss_dssp ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred EcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhH----HHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEEC
Confidence 699999999999999999999999999865310000 000011 12579999999999999999999 99999999
Q ss_pred ccC-----ChhcHHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCC-CccchhhHHHHHHhhhcCCcEEEec
Q 022578 80 NGR-----EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLR 150 (295)
Q Consensus 80 a~~-----~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~~~~~~~~i~R 150 (295)
++. +..++.+++++|+ + ++|||+ | +||...... +.+..| .++|.+|..+|+++++.+++++++|
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilr 156 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAIEAASIPYTYVS 156 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEE
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHHHhcCCCeEEEE
Confidence 986 5678999999987 6 889985 3 455322211 223233 3345999999999999999999999
Q ss_pred cCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCC-cccCHHHHHHH
Q 022578 151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARA 229 (295)
Q Consensus 151 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~-~~~t~~e~~~~ 229 (295)
|+.++++..... ..........++.+.++++++..+++++++|+|++++.++.++...++.|+++++ +.+|+.|+++.
T Consensus 157 p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~ 235 (313)
T 1qyd_A 157 SNMFAGYFAGSL-AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQI 235 (313)
T ss_dssp CCEEHHHHTTTS-SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHH
T ss_pred eceecccccccc-ccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHH
Confidence 999988532110 0000000113344556678889999999999999999999887666788888875 78999999999
Q ss_pred HHHHhCCCCCCCCcccccCCcc
Q 022578 230 CAKVTGLLDFRSLNLCTTTPKS 251 (295)
Q Consensus 230 i~~~~g~~~~~~~~~~~~~~~~ 251 (295)
+++.+|++ ..+...+...
T Consensus 236 ~~~~~g~~----~~~~~~~~~~ 253 (313)
T 1qyd_A 236 WERLSEQN----LDKIYISSQD 253 (313)
T ss_dssp HHHHHTCC----CEECCBCSHH
T ss_pred HHHhcCCC----CceEECCHHH
Confidence 99999988 4555555443
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-29 Score=200.96 Aligned_cols=200 Identities=18% Similarity=0.239 Sum_probs=134.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||||+||++++++|+++|++|++++|++++.... ..+++++.+|++|+++ +.+. ++|+|||++
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a 69 (221)
T 3ew7_A 6 IGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT------------HKDINILQKDIFDLTL--SDLS--DQNVVVDAY 69 (221)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH------------CSSSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred EcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc------------cCCCeEEeccccChhh--hhhc--CCCEEEECC
Confidence 79999999999999999999999999997763211 1579999999999887 7888 999999999
Q ss_pred cC-------ChhcHHHHHHhCC--CCCcEEEeeccccccC-CCCCCCCCCCCCCCCccc-hhhHHHHHH--hh--hcCCc
Q 022578 81 GR-------EADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESV--LE--SKGVN 145 (295)
Q Consensus 81 ~~-------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~p~~~~-~~k~~~E~~--~~--~~~~~ 145 (295)
+. +..++++++++++ +.+++|++||.++|.. ....+..|+.+..|..+| .+|..+|.+ ++ ..+++
T Consensus 70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~ 149 (221)
T 3ew7_A 70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFS 149 (221)
T ss_dssp CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred cCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 87 3467899999998 6899999999877654 333355666666666655 889988876 55 68999
Q ss_pred EEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHHH
Q 022578 146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG 225 (295)
Q Consensus 146 ~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e 225 (295)
++++||+.+|||+..... + ...+..+...+++ .++++++|+|++++.++.++...+++|+++++...+.+|
T Consensus 150 ~~ivrp~~v~g~~~~~~~---~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 150 WTYISPSAMFEPGERTGD---Y---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH 220 (221)
T ss_dssp EEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred EEEEeCcceecCCCccCc---e---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence 999999999998432111 1 1123333333433 368999999999999999988889999999998777654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=210.68 Aligned_cols=225 Identities=17% Similarity=0.209 Sum_probs=173.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||||++|++++++|+++|++|++++|+++..... +.. ...+++++.+|++|++++.++++ ++|+|||+
T Consensus 17 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--------~~~l~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~ 86 (318)
T 2r6j_A 17 FGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTL--------LDEFQSLGAIIVKGELDEHEKLVELMK--KVDVVISA 86 (318)
T ss_dssp ETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHH--------HHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred ECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhH--------HHHhhcCCCEEEEecCCCHHHHHHHHc--CCCEEEEC
Confidence 69999999999999999999999999987521110 000 12579999999999999999999 99999999
Q ss_pred ccCC-hhcHHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCC-CccchhhHHHHHHhhhcCCcEEEeccCee
Q 022578 80 NGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYI 154 (295)
Q Consensus 80 a~~~-~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~~~~~~~~i~R~~~i 154 (295)
++.. ...+++++++++ + +++||+ | +||.. .+|..+..| ...|.+|..+|+++++.+++++++||+.+
T Consensus 87 a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~ 158 (318)
T 2r6j_A 87 LAFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVE----EDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCF 158 (318)
T ss_dssp CCGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSC----TTTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEE
T ss_pred CchhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccC----cccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEccee
Confidence 9863 567899999987 6 889985 3 34432 123233333 23459999999999999999999999988
Q ss_pred ecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCC-cccCHHHHHHHHHHH
Q 022578 155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACAKV 233 (295)
Q Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~-~~~t~~e~~~~i~~~ 233 (295)
+++ +...+......+..+.++++++..+++++++|+|++++.++.++...++.|+++++ +.+|+.|+++.+++.
T Consensus 159 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~ 233 (318)
T 2r6j_A 159 ASY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKK 233 (318)
T ss_dssp HHH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHH
T ss_pred hhh-----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHH
Confidence 764 22233222223445566678889999999999999999999887656778888764 789999999999999
Q ss_pred hCCCCCCCCcccccCCccc
Q 022578 234 TGLLDFRSLNLCTTTPKSL 252 (295)
Q Consensus 234 ~g~~~~~~~~~~~~~~~~~ 252 (295)
+|++ ..+...+...+
T Consensus 234 ~g~~----~~~~~~~~~~~ 248 (318)
T 2r6j_A 234 IGKK----FKKIHVPEEEI 248 (318)
T ss_dssp HTCC----CEEEEECHHHH
T ss_pred hCCC----CceeecCHHHH
Confidence 9988 55555554433
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=211.13 Aligned_cols=221 Identities=20% Similarity=0.230 Sum_probs=170.9
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||||++|++++++|+++| ++|++++|++.+... ..+. ..+++++.+|++|++++..+++ ++|+|||+
T Consensus 11 tGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-------~~l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~ 79 (299)
T 2wm3_A 11 FGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-------KELR--LQGAEVVQGDQDDQVIMELALN--GAYATFIV 79 (299)
T ss_dssp ETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-------HHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred ECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-------HHHH--HCCCEEEEecCCCHHHHHHHHh--cCCEEEEe
Confidence 7999999999999999998 999999998765210 0001 2578999999999999999999 99999999
Q ss_pred ccC--------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEe
Q 022578 80 NGR--------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL 149 (295)
Q Consensus 80 a~~--------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~ 149 (295)
++. +..++++++++++ ++++||++|+.++|+...+ ..+..|+.+|..+|+++++.+++++++
T Consensus 80 a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~--------~~~~~y~~sK~~~e~~~~~~gi~~~il 151 (299)
T 2wm3_A 80 TNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG--------RLAAAHFDGKGEVEEYFRDIGVPMTSV 151 (299)
T ss_dssp CCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT--------SCCCHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC--------cccCchhhHHHHHHHHHHHCCCCEEEE
Confidence 874 2446889999987 8999999998888753221 113446699999999999999999999
Q ss_pred ccCeeecCCCCCchHHHHHHH-HHcCCC--cccCCCCCceeeeeeHHHHHHHHHHHhcCCC-CCCceEEecCCcccCHHH
Q 022578 150 RPVYIYGPLNYNPVEEWFFHR-LKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKYVTFDG 225 (295)
Q Consensus 150 R~~~i~g~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~~~~~~i~~~~~~t~~e 225 (295)
||+.+||+.... ++.. ...++. +.+ ..++..+++++++|+|++++.++.++. ..++.|++++ +.+|+.|
T Consensus 152 rp~~~~~~~~~~-----~~~~~~~~g~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e 224 (299)
T 2wm3_A 152 RLPCYFENLLSH-----FLPQKAPDGKSYLLSL-PTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEE 224 (299)
T ss_dssp ECCEEGGGGGTT-----TCCEECTTSSSEEECC-CCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHH
T ss_pred eecHHhhhchhh-----cCCcccCCCCEEEEEe-cCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHH
Confidence 999999974211 1111 112322 222 246778999999999999999998742 4578999987 6799999
Q ss_pred HHHHHHHHhCCCCCCCCcccccCCcc
Q 022578 226 LARACAKVTGLLDFRSLNLCTTTPKS 251 (295)
Q Consensus 226 ~~~~i~~~~g~~~~~~~~~~~~~~~~ 251 (295)
+++.+++.+|++ ..+...+...
T Consensus 225 ~~~~~~~~~g~~----~~~~~~~~~~ 246 (299)
T 2wm3_A 225 YAALLTKHTRKV----VHDAKMTPED 246 (299)
T ss_dssp HHHHHHHHHSSC----EEECCCCTHH
T ss_pred HHHHHHHHHCCC----ceeEecCHHH
Confidence 999999999988 4445555433
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-28 Score=210.94 Aligned_cols=222 Identities=14% Similarity=0.134 Sum_probs=168.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEec-CCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-RKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D-~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||||+||++++++|+++|++|++++|++++... ..+. ...+++++.+| ++|++++.++++ ++|+|||+
T Consensus 11 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~l~-~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~ 80 (352)
T 1xgk_A 11 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-------EELQ-AIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN 80 (352)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH-------HHHH-TSTTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH-------HHHh-hcCCcEEEECCccCCHHHHHHHHh--cCCEEEEc
Confidence 7999999999999999999999999998765210 0011 11478999999 999999999999 99999999
Q ss_pred ccCC----hhcHHHHHHhCC--C-CCcEEEeeccc--cccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEec
Q 022578 80 NGRE----ADEVEPILDALP--N-LEQFIYCSSAG--VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR 150 (295)
Q Consensus 80 a~~~----~~~~~~ll~~~~--~-~~~~i~~Ss~~--v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R 150 (295)
++.. ....++++++++ + +++|||+||.+ .|+. ..+..|+.+|..+|+++++.+++++++|
T Consensus 81 a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~~~~~y~~sK~~~E~~~~~~gi~~~ivr 149 (352)
T 1xgk_A 81 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------WPAVPMWAPKFTVENYVRQLGLPSTFVY 149 (352)
T ss_dssp CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------CCCCTTTHHHHHHHHHHHTSSSCEEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC-----------CCCccHHHHHHHHHHHHHHcCCCEEEEe
Confidence 8653 234589999987 7 89999999985 3321 2234577999999999999999999999
Q ss_pred cCeeecCCCCCchHHHHHHH--HHcCCC-cccCCCCCceeeeeeH-HHHHHHHHHHhcCCC--CCCceEEecCCcccCHH
Q 022578 151 PVYIYGPLNYNPVEEWFFHR--LKAGRP-IPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFD 224 (295)
Q Consensus 151 ~~~i~g~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~i~~-~D~a~~i~~~~~~~~--~~~~~~~i~~~~~~t~~ 224 (295)
|+ +||++....... ++.. ...+.. +.+++++++.++++++ +|+|++++.++.++. ..+++|++++ +.+|+.
T Consensus 150 pg-~~g~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~ 226 (352)
T 1xgk_A 150 AG-IYNNNFTSLPYP-LFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPV 226 (352)
T ss_dssp EC-EEGGGCBSSSCS-SCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHH
T ss_pred cc-eecCCchhcccc-cccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHH
Confidence 87 688764321110 1100 123332 2346677888999999 899999999998652 3578999996 679999
Q ss_pred HHHHHHHHHhCCCCCCCCcccccCCc
Q 022578 225 GLARACAKVTGLLDFRSLNLCTTTPK 250 (295)
Q Consensus 225 e~~~~i~~~~g~~~~~~~~~~~~~~~ 250 (295)
|+++.+++.+|++ ..+.+.+..
T Consensus 227 e~~~~i~~~~G~~----~~~~~vp~~ 248 (352)
T 1xgk_A 227 QVCAAFSRALNRR----VTYVQVPKV 248 (352)
T ss_dssp HHHHHHHHHHTSC----EEEEECSSC
T ss_pred HHHHHHHHHHCCC----CceEECCHH
Confidence 9999999999988 445555533
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=209.29 Aligned_cols=228 Identities=17% Similarity=0.207 Sum_probs=171.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCC-CccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||||++|++++++|+++|++|++++|++ +...... ...+.. ...+++++.+|++|++++.++++ ++|+|||
T Consensus 10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi~ 83 (321)
T 3c1o_A 10 YGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSS----VQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVIS 83 (321)
T ss_dssp ETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHH----HHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred EcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHH----HHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence 69999999999999999999999999987 2100000 000000 12579999999999999999999 9999999
Q ss_pred cccCC-hhcHHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCC-CccchhhHHHHHHhhhcCCcEEEeccCe
Q 022578 79 INGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVY 153 (295)
Q Consensus 79 ~a~~~-~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~~~~~~~~i~R~~~ 153 (295)
+++.. ...+++++++|. + ++|||+ | +||.. .+|..+..| .+.|.+|..+|+++++.+++++++||+.
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~~ 155 (321)
T 3c1o_A 84 ALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCE----EDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANC 155 (321)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSC----GGGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECCE
T ss_pred CCCccchhhHHHHHHHHHHhCCccEEec-c---ccccC----ccccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEece
Confidence 99864 578999999987 7 899983 3 34432 123233333 2234999999999999999999999999
Q ss_pred eecCCCCCchHHHHHHH---HHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCC-cccCHHHHHHH
Q 022578 154 IYGPLNYNPVEEWFFHR---LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARA 229 (295)
Q Consensus 154 i~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~-~~~t~~e~~~~ 229 (295)
++++. ...+... ...++.+.++++++..+++++++|+|++++.++.++...++.|+++++ +.+|+.|+++.
T Consensus 156 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~ 230 (321)
T 3c1o_A 156 FGAYF-----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISL 230 (321)
T ss_dssp EHHHH-----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHH
T ss_pred ecccc-----ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHH
Confidence 88852 2222210 123445556678889999999999999999999887666788899874 78999999999
Q ss_pred HHHHhCCCCCCCCcccccCCcc
Q 022578 230 CAKVTGLLDFRSLNLCTTTPKS 251 (295)
Q Consensus 230 i~~~~g~~~~~~~~~~~~~~~~ 251 (295)
+++.+|++ ..+...+...
T Consensus 231 ~~~~~g~~----~~~~~~~~~~ 248 (321)
T 3c1o_A 231 WEAKSGLS----FKKVHMPDEQ 248 (321)
T ss_dssp HHHHHTSC----CCEEEECHHH
T ss_pred HHHHcCCc----ceeeeCCHHH
Confidence 99999987 4555555433
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-29 Score=202.31 Aligned_cols=193 Identities=12% Similarity=0.152 Sum_probs=155.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCe-EEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||||+||++++++|+++|++|++++|++++.... . ..++ +++.+|++ +++.+++. ++|+|||+
T Consensus 27 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~---------~--~~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~ 91 (236)
T 3e8x_A 27 VGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL---------R--ERGASDIVVANLE--EDFSHAFA--SIDAVVFA 91 (236)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH---------H--HTTCSEEEECCTT--SCCGGGGT--TCSEEEEC
T ss_pred ECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH---------H--hCCCceEEEcccH--HHHHHHHc--CCCEEEEC
Confidence 79999999999999999999999999998763211 1 1478 99999998 77888898 99999999
Q ss_pred ccC------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cchhhHHHHHHhhhcCC
Q 022578 80 NGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGV 144 (295)
Q Consensus 80 a~~------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~~k~~~E~~~~~~~~ 144 (295)
+|. |..++.+++++++ ++++||++||.+.+.. +..+ .+.. |..+|..+|++++..++
T Consensus 92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~e~~~~~~gi 163 (236)
T 3e8x_A 92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLADDELKRSSL 163 (236)
T ss_dssp CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHHHHHHHHCCC
Confidence 986 5667899999998 8899999999665422 1111 2333 44999999999999999
Q ss_pred cEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccCHH
Q 022578 145 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224 (295)
Q Consensus 145 ~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~ 224 (295)
+++++||+.+||+..... +.....+....++++++|+|++++.++.++...++.|+++++ .+++.
T Consensus 164 ~~~~lrpg~v~~~~~~~~--------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~ 228 (236)
T 3e8x_A 164 DYTIVRPGPLSNEESTGK--------------VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIA 228 (236)
T ss_dssp EEEEEEECSEECSCCCSE--------------EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHH
T ss_pred CEEEEeCCcccCCCCCCe--------------EEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHH
Confidence 999999999999854221 122234445688999999999999999987777889999888 49999
Q ss_pred HHHHHHH
Q 022578 225 GLARACA 231 (295)
Q Consensus 225 e~~~~i~ 231 (295)
|+++.++
T Consensus 229 e~~~~i~ 235 (236)
T 3e8x_A 229 KVVEQLG 235 (236)
T ss_dssp HHHHTC-
T ss_pred HHHHHhc
Confidence 9998765
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=206.17 Aligned_cols=207 Identities=17% Similarity=0.226 Sum_probs=168.9
Q ss_pred CCcCCcchHHHHHHHHHC-CC-eEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GH-QVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
|||||+||++++++|+++ |+ +|++++|++.+..... ... ..+++++.+|++|.+++.++++ ++|+||
T Consensus 27 TGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~--------~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vi 96 (344)
T 2gn4_A 27 TGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMA--------MEFNDPRMRFFIGDVRDLERLNYALE--GVDICI 96 (344)
T ss_dssp ETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHH--------HHHCCTTEEEEECCTTCHHHHHHHTT--TCSEEE
T ss_pred ECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHH--------HHhcCCCEEEEECCCCCHHHHHHHHh--cCCEEE
Confidence 799999999999999999 97 9999999865521100 000 2579999999999999999999 999999
Q ss_pred EcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cchhhHHHHHH
Q 022578 78 DINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESV 138 (295)
Q Consensus 78 ~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~~k~~~E~~ 138 (295)
|+|+. |+.++.++++++. ++++||++||..++. |.+ |..+|+.+|.+
T Consensus 97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~--------------p~~~Y~~sK~~~E~~ 162 (344)
T 2gn4_A 97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN--------------PINLYGATKLCSDKL 162 (344)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS--------------CCSHHHHHHHHHHHH
T ss_pred ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC--------------CccHHHHHHHHHHHH
Confidence 99986 3456789999987 889999999977641 233 55999999999
Q ss_pred hhh-------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 022578 139 LES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210 (295)
Q Consensus 139 ~~~-------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 210 (295)
++. .+++++++|||++||++. ..++.+...+..|+ ++.+. +++..+++++++|+|++++.++.++. .+
T Consensus 163 ~~~~~~~~~~~g~~~~~vRpg~v~g~~~--~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g 238 (344)
T 2gn4_A 163 FVSANNFKGSSQTQFSVVRYGNVVGSRG--SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GG 238 (344)
T ss_dssp HHHGGGCCCSSCCEEEEECCCEETTCTT--SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SS
T ss_pred HHHHHHHhCCCCcEEEEEEeccEECCCC--CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CC
Confidence 853 469999999999999864 45677778888888 77664 67788999999999999999998753 46
Q ss_pred ceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
++|++.++ .+++.|+++.+.+.++.
T Consensus 239 ~~~~~~~~-~~s~~el~~~i~~~~~~ 263 (344)
T 2gn4_A 239 EIFVPKIP-SMKMTDLAKALAPNTPT 263 (344)
T ss_dssp CEEEECCC-EEEHHHHHHHHCTTCCE
T ss_pred CEEecCCC-cEEHHHHHHHHHHhCCe
Confidence 79998776 59999999999876543
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=198.02 Aligned_cols=198 Identities=14% Similarity=0.133 Sum_probs=150.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||||+||++++++|+++|++|++++|++.+..... ..+++++.+|++|+++ +.+. ++|+|||++
T Consensus 6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a 70 (224)
T 3h2s_A 6 LGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----------GATVATLVKEPLVLTE--ADLD--SVDAVVDAL 70 (224)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----------CTTSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred EcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----------CCCceEEecccccccH--hhcc--cCCEEEECC
Confidence 799999999999999999999999999977633221 2579999999999887 7888 999999999
Q ss_pred cC---------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCC---CCCCCCCCCCCCccc-hhhHHHHHH--h-hhc
Q 022578 81 GR---------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL---LPHCETDTVDPKSRH-KGKLNTESV--L-ESK 142 (295)
Q Consensus 81 ~~---------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~---~~~~e~~~~~p~~~~-~~k~~~E~~--~-~~~ 142 (295)
+. |..++++++++|+ + ++||++||.+++..... .+.+|.....|...| .+|..+|.+ + +..
T Consensus 71 g~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~ 149 (224)
T 3h2s_A 71 SVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA 149 (224)
T ss_dssp CCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred ccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence 87 5678999999998 6 99999999876554322 233344434445555 899998865 2 467
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccC
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t 222 (295)
+++++++||+.+||++....+. .....+.. +....++++++|+|++++.++.++...+++|++++.+..+
T Consensus 150 ~i~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~ 219 (224)
T 3h2s_A 150 NVNWIGISPSEAFPSGPATSYV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEH 219 (224)
T ss_dssp TSCEEEEEECSBCCCCCCCCEE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred CCcEEEEcCccccCCCcccCce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence 9999999999999995433210 11222222 2345689999999999999999988889999999977655
Q ss_pred HH
Q 022578 223 FD 224 (295)
Q Consensus 223 ~~ 224 (295)
+.
T Consensus 220 ~~ 221 (224)
T 3h2s_A 220 HH 221 (224)
T ss_dssp --
T ss_pred cc
Confidence 44
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=209.07 Aligned_cols=230 Identities=15% Similarity=0.202 Sum_probs=172.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCcc--ccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
|||||++|++++++|+++|++|++++|++... +.. ...+.. ...+++++.+|++|++++.++++ ++|+||
T Consensus 10 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi 82 (308)
T 1qyc_A 10 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK-----AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVI 82 (308)
T ss_dssp ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH-----HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEE
T ss_pred EcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHH-----HHHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEE
Confidence 69999999999999999999999999986542 000 000011 12579999999999999999999 999999
Q ss_pred EcccCC-hhcHHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCC-ccchhhHHHHHHhhhcCCcEEEeccC
Q 022578 78 DINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVLESKGVNWTSLRPV 152 (295)
Q Consensus 78 ~~a~~~-~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~~~~~k~~~E~~~~~~~~~~~i~R~~ 152 (295)
|+++.. ..++.+++++|+ + ++|||+ |+ ||.. .+|..+..|. ..|.+|..+|+++++.+++++++||+
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~ 154 (308)
T 1qyc_A 83 STVGSLQIESQVNIIKAIKEVGTVKRFFP-SE---FGND----VDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN 154 (308)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred ECCcchhhhhHHHHHHHHHhcCCCceEee-cc---cccC----ccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 999864 567899999987 7 899984 43 4422 1233333442 34599999999999999999999999
Q ss_pred eeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCC-cccCHHHHHHHHH
Q 022578 153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACA 231 (295)
Q Consensus 153 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~-~~~t~~e~~~~i~ 231 (295)
.++++..... ... ......++.+.++++++..+++++++|+|++++.++.++...++.|+++++ +.+|+.|+++.++
T Consensus 155 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~ 232 (308)
T 1qyc_A 155 CFAGYFLRSL-AQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWE 232 (308)
T ss_dssp EEHHHHTTTT-TCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHH
T ss_pred eecccccccc-ccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHH
Confidence 9988532110 000 000113344566678889999999999999999999887666778898875 6899999999999
Q ss_pred HHhCCCCCCCCcccccCCcc
Q 022578 232 KVTGLLDFRSLNLCTTTPKS 251 (295)
Q Consensus 232 ~~~g~~~~~~~~~~~~~~~~ 251 (295)
+.+|++ ..+...+...
T Consensus 233 ~~~g~~----~~~~~~~~~~ 248 (308)
T 1qyc_A 233 KKIDKT----LEKAYVPEEE 248 (308)
T ss_dssp HHTTSC----CEEEEECHHH
T ss_pred HHhCCC----CceEeCCHHH
Confidence 999988 5555555443
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-28 Score=204.71 Aligned_cols=233 Identities=18% Similarity=0.215 Sum_probs=171.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||||++|++++++|+++|++|++++|+++.......+ ...+.. ...+++++.+|++|++++.++++ ++|+|||+
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 83 (307)
T 2gas_A 8 LGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETK--EELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIVICA 83 (307)
T ss_dssp ESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHH--HHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred ECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHH--HHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEEEEC
Confidence 69999999999999999999999999987210000000 000001 12579999999999999999999 99999999
Q ss_pred ccCC-hhcHHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCC-CccchhhHHHHHHhhhcCCcEEEeccCee
Q 022578 80 NGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYI 154 (295)
Q Consensus 80 a~~~-~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~~~~~~~~i~R~~~i 154 (295)
++.. ..++.+++++|+ + ++|||+ | +||... ++..+..| .+.|.+|..+|+++++.+++++++||+.+
T Consensus 84 a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~ 155 (307)
T 2gas_A 84 AGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAF 155 (307)
T ss_dssp SSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEE
T ss_pred CcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEccee
Confidence 9864 678999999987 7 899983 3 344321 23333344 23459999999999999999999999999
Q ss_pred ecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCC-cccCHHHHHHHHHHH
Q 022578 155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACAKV 233 (295)
Q Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~-~~~t~~e~~~~i~~~ 233 (295)
+++.... +... ......++.+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+++.
T Consensus 156 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 233 (307)
T 2gas_A 156 TGYFLRN-LAQL-DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKK 233 (307)
T ss_dssp TTTTGGG-TTCT-TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHH
T ss_pred ecccccc-cccc-ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHH
Confidence 9864211 0000 000112334555678888999999999999999999887666778888775 689999999999999
Q ss_pred hCCCCCCCCcccccCCcc
Q 022578 234 TGLLDFRSLNLCTTTPKS 251 (295)
Q Consensus 234 ~g~~~~~~~~~~~~~~~~ 251 (295)
+|++ ..+...+...
T Consensus 234 ~g~~----~~~~~~~~~~ 247 (307)
T 2gas_A 234 IGKT----LEKTYVSEEQ 247 (307)
T ss_dssp HTSC----CEEEEECHHH
T ss_pred hCCC----CceeecCHHH
Confidence 9987 5555555443
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=202.54 Aligned_cols=225 Identities=21% Similarity=0.263 Sum_probs=158.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+||||++++++|+++|++|+++.| ++.... .... ...+.....+++++.+|++|++++.++++ ++|+|||+
T Consensus 7 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~ 81 (322)
T 2p4h_X 7 TGGTGFLGSWIIKSLLENGYSVNTTIRADPERKR-DVSF--LTNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGIFHT 81 (322)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEECCCC----C-CCHH--HHTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEEEEC
T ss_pred ECChhHHHHHHHHHHHHCCCEEEEEEeCCccchh-HHHH--HHhhhccCCceEEEecCCCCHHHHHHHHc--CCCEEEEc
Confidence 799999999999999999999999998 543210 0000 00000001257889999999999999999 99999999
Q ss_pred ccC---------------ChhcHHHHHHhCC---CCCcEEEeeccccc-cCC-CCCCCCCCCCC--------CCC--ccc
Q 022578 80 NGR---------------EADEVEPILDALP---NLEQFIYCSSAGVY-LKS-DLLPHCETDTV--------DPK--SRH 129 (295)
Q Consensus 80 a~~---------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~-~~~-~~~~~~e~~~~--------~p~--~~~ 129 (295)
|+. |+.++.+++++|. ++++|||+||.+++ +.. ...+++|+.+. .|. .|.
T Consensus 82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~ 161 (322)
T 2p4h_X 82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA 161 (322)
T ss_dssp CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence 864 2346888999876 47899999998754 332 22355665432 233 355
Q ss_pred hhhHHHHHHhh----hcCCcEEEeccCeeecCCCCCchHHHH--HHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWF--FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 130 ~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
.+|..+|+++. ..+++++++||+++|||.........+ +.....|....+ +. ...+++|++|+|++++.++
T Consensus 162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~ 238 (322)
T 2p4h_X 162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLL 238 (322)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHh
Confidence 99999998774 368999999999999997532211111 112234554433 22 3348999999999999999
Q ss_pred cCCCCCCceEEecCCcccCHHHHHHHHHHHhC
Q 022578 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 204 ~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
.++...| .|+ ++++.+|+.|+++.+.+.++
T Consensus 239 ~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 239 ENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp HSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred hCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCC
Confidence 7754444 588 56688999999999998874
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=203.28 Aligned_cols=226 Identities=17% Similarity=0.221 Sum_probs=159.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++++++|+++|++|++++|++........ ...+.....+++++.+|++|++++.++++ ++|+|||+|
T Consensus 11 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A 85 (337)
T 2c29_D 11 TGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH---LLDLPKAETHLTLWKADLADEGSFDEAIK--GCTGVFHVA 85 (337)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH---HHTSTTHHHHEEEEECCTTSTTTTHHHHT--TCSEEEECC
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH---HHhcccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEEEec
Confidence 8999999999999999999999999998763110000 00000001258899999999999999998 999999998
Q ss_pred cC---------------ChhcHHHHHHhCC--C-CCcEEEeecccc-ccCC-CCCCCCCCCCCC---------CCc-cch
Q 022578 81 GR---------------EADEVEPILDALP--N-LEQFIYCSSAGV-YLKS-DLLPHCETDTVD---------PKS-RHK 130 (295)
Q Consensus 81 ~~---------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v-~~~~-~~~~~~e~~~~~---------p~~-~~~ 130 (295)
+. |+.++.+++++|. + +++|||+||.++ |+.. ...+++|+.+.. |.. |..
T Consensus 86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~ 165 (337)
T 2c29_D 86 TPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFV 165 (337)
T ss_dssp CCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHH
T ss_pred cccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHH
Confidence 74 2346788999887 5 899999999874 4432 233456664321 222 459
Q ss_pred hhHHHHHHhh----hcCCcEEEeccCeeecCCCCCchHHHHHHH--HHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR--LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 131 ~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+|..+|.++. ..+++++++||+++|||+....+...+... ...|..... +.. ....++|++|+|++++.++.
T Consensus 166 sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~-~~~-~~~~~i~v~Dva~a~~~~~~ 243 (337)
T 2c29_D 166 SKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHY-SII-RQGQFVHLDDLCNAHIYLFE 243 (337)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGH-HHH-TEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccc-ccc-CCCCEEEHHHHHHHHHHHhc
Confidence 9999998763 468999999999999997643322222111 123433211 211 22459999999999999998
Q ss_pred CCCCCCceEEecCCcccCHHHHHHHHHHHhC
Q 022578 205 NEKASRQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
++.. ++.|++++ ..+|+.|+++.+.+.++
T Consensus 244 ~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 244 NPKA-EGRYICSS-HDCIILDLAKMLREKYP 272 (337)
T ss_dssp CTTC-CEEEEECC-EEEEHHHHHHHHHHHCT
T ss_pred Cccc-CceEEEeC-CCCCHHHHHHHHHHHCC
Confidence 7544 44776655 56899999999999874
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-28 Score=207.79 Aligned_cols=226 Identities=20% Similarity=0.239 Sum_probs=160.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|+++.|++..... ... ...+. ...+++++.+|++|++++.++++ ++|+|||+|
T Consensus 15 TGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~-~~~--~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A 88 (338)
T 2rh8_A 15 VGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKK-VSH--LLELQ-ELGDLKIFRADLTDELSFEAPIA--GCDFVFHVA 88 (338)
T ss_dssp ECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTT-THH--HHHHG-GGSCEEEEECCTTTSSSSHHHHT--TCSEEEEES
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhh-HHH--HHhcC-CCCcEEEEecCCCChHHHHHHHc--CCCEEEEeC
Confidence 7999999999999999999999999997654211 000 00011 12468899999999999999998 899999998
Q ss_pred cC---------------ChhcHHHHHHhCC--C-CCcEEEeecccc-ccCC-C--CCCCCCCCCC--------CC-C-cc
Q 022578 81 GR---------------EADEVEPILDALP--N-LEQFIYCSSAGV-YLKS-D--LLPHCETDTV--------DP-K-SR 128 (295)
Q Consensus 81 ~~---------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v-~~~~-~--~~~~~e~~~~--------~p-~-~~ 128 (295)
+. |+.++.+++++|. + ++||||+||.++ |+.. . ..+++|+... .| . .|
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 168 (338)
T 2rh8_A 89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY 168 (338)
T ss_dssp SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence 74 2346888999876 4 789999999874 4321 1 1366776522 11 1 25
Q ss_pred chhhHHHHHHhh----hcCCcEEEeccCeeecCCCCCchHHH--HHHHHHcCCCcccCCCC------CceeeeeeHHHHH
Q 022578 129 HKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEW--FFHRLKAGRPIPIPGSG------IQVTQLGHVKDLA 196 (295)
Q Consensus 129 ~~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~i~~~D~a 196 (295)
..+|..+|++++ ..+++++++||+.+|||+........ .+.....|....+ +.. ...++++|++|+|
T Consensus 169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~i~v~Dva 247 (338)
T 2rh8_A 169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLI-NGMKGMQMLSGSVSIAHVEDVC 247 (338)
T ss_dssp TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHH-HHHHHHHHHHSSEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccc-ccccccccccCcccEEEHHHHH
Confidence 699999998773 36899999999999999764321111 1112234443211 111 1234899999999
Q ss_pred HHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhC
Q 022578 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 197 ~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g 235 (295)
++++.+++++.. ++.|++++ ..+|+.|+++.+.+.++
T Consensus 248 ~a~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 248 RAHIFVAEKESA-SGRYICCA-ANTSVPELAKFLSKRYP 284 (338)
T ss_dssp HHHHHHHHCTTC-CEEEEECS-EEECHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCCc-CCcEEEec-CCCCHHHHHHHHHHhCC
Confidence 999999977544 45788766 45899999999999876
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-27 Score=197.51 Aligned_cols=205 Identities=16% Similarity=0.136 Sum_probs=159.1
Q ss_pred CCcCCcchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+|+||++++++|+++ |++|++++|++.+.... ..+++++.+|++|++++.++++ ++|+|||
T Consensus 10 tGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 75 (253)
T 1xq6_A 10 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------GGEADVFIGDITDADSINPAFQ--GIDALVI 75 (253)
T ss_dssp ESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred EcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------------CCCeeEEEecCCCHHHHHHHHc--CCCEEEE
Confidence 799999999999999999 89999999987553211 2468899999999999999999 8999999
Q ss_pred cccCC-----------------------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC--
Q 022578 79 INGRE-----------------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-- 125 (295)
Q Consensus 79 ~a~~~-----------------------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-- 125 (295)
+++.. ..++.+++++++ ++++||++||.+++.. ..+..+
T Consensus 76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~~~~~ 147 (253)
T 1xq6_A 76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPLNKLG 147 (253)
T ss_dssp CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGGGGGG
T ss_pred eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCcccccc
Confidence 98742 235788999987 7889999999887522 111111
Q ss_pred -CccchhhHHHHHHhhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 126 -KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 126 -~~~~~~k~~~E~~~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
..|..+|..+|.+++..+++++++||+.+||+...... ...+....++++ ...+++++|+|++++.++.
T Consensus 148 ~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~Dva~~~~~~~~ 217 (253)
T 1xq6_A 148 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE-------LLVGKDDELLQT---DTKTVPRADVAEVCIQALL 217 (253)
T ss_dssp GCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSC-------EEEESTTGGGGS---SCCEEEHHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhh-------hhccCCcCCcCC---CCcEEcHHHHHHHHHHHHc
Confidence 12346899999999999999999999999998642110 001111112221 2468999999999999998
Q ss_pred CCCCCCceEEecCCc---ccCHHHHHHHHHHHhCCC
Q 022578 205 NEKASRQVFNISGEK---YVTFDGLARACAKVTGLL 237 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~---~~t~~e~~~~i~~~~g~~ 237 (295)
++...+++|++++++ .+|+.|+++.+++.+|++
T Consensus 218 ~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 218 FEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp CGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred CccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 876667899999864 599999999999998864
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-27 Score=198.60 Aligned_cols=197 Identities=13% Similarity=0.038 Sum_probs=164.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|+||++++++|+++|++|++++|++.... . .+++++.+|++|++++.++++ ++|+|||++
T Consensus 8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~-----------~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a 71 (267)
T 3ay3_A 8 TGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---E-----------AHEEIVACDLADAQAVHDLVK--DCDGIIHLG 71 (267)
T ss_dssp ESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---C-----------TTEEECCCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---C-----------CCccEEEccCCCHHHHHHHHc--CCCEEEECC
Confidence 799999999999999999999999999876421 1 467899999999999999999 899999999
Q ss_pred cC------------ChhcHHHHHHhCC--CCCcEEEeeccccccCC-CCCCCCCCCCCCCCccc-hhhHHHHHHhh----
Q 022578 81 GR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVLE---- 140 (295)
Q Consensus 81 ~~------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~p~~~~-~~k~~~E~~~~---- 140 (295)
+. |..++.++++++. ++++|||+||..+|+.. ...+++|+.+..|...| .+|..+|.+++
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~ 151 (267)
T 3ay3_A 72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH 151 (267)
T ss_dssp SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 85 4557889999987 78899999999999874 45678999888887665 99999999874
Q ss_pred hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcc
Q 022578 141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY 220 (295)
Q Consensus 141 ~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~ 220 (295)
..+++++++||+.+|+.. .+++...++++++|+|++++.++.++...+++|++.++..
T Consensus 152 ~~gi~~~~lrp~~v~~~~----------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~ 209 (267)
T 3ay3_A 152 KFDIETLNIRIGSCFPKP----------------------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANT 209 (267)
T ss_dssp TTCCCEEEEEECBCSSSC----------------------CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCS
T ss_pred HcCCCEEEEeceeecCCC----------------------CCCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCcc
Confidence 468999999999998421 0123456789999999999999988655457899988887
Q ss_pred cCHHHHHHHHHHHhCCC
Q 022578 221 VTFDGLARACAKVTGLL 237 (295)
Q Consensus 221 ~t~~e~~~~i~~~~g~~ 237 (295)
.++.|+.+. +.+|.+
T Consensus 210 ~~~~d~~~~--~~lg~~ 224 (267)
T 3ay3_A 210 ESWWDNDKS--AFLGWV 224 (267)
T ss_dssp SCCBCCGGG--GGGCCC
T ss_pred ccccCHHHH--HHcCCC
Confidence 888888777 777876
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.2e-26 Score=180.67 Aligned_cols=184 Identities=17% Similarity=0.257 Sum_probs=145.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|+||++++++|+++|++|++++|++.+..... ..+++++.+|++|++++.++++ ++|+|||++
T Consensus 9 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a 75 (206)
T 1hdo_A 9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL 75 (206)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred EcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-----------CCceEEEEecCCCHHHHHHHHc--CCCEEEECc
Confidence 699999999999999999999999999877643221 2579999999999999999999 899999999
Q ss_pred cCC---------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cchhhHHHHHHhhhcCCcEEE
Q 022578 81 GRE---------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTS 148 (295)
Q Consensus 81 ~~~---------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~~k~~~E~~~~~~~~~~~i 148 (295)
+.. ..++.+++++++ ++++||++||.++|+.....+. +.. |..+|..+|+++++.++++++
T Consensus 76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-------~~~~y~~~K~~~e~~~~~~~i~~~~ 148 (206)
T 1hdo_A 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP-------RLQAVTDDHIRMHKVLRESGLKYVA 148 (206)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG-------GGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc-------cchhHHHHHHHHHHHHHhCCCCEEE
Confidence 863 346889999987 8889999999999875433211 233 459999999999999999999
Q ss_pred eccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCc
Q 022578 149 LRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219 (295)
Q Consensus 149 ~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~ 219 (295)
+||+.++ ++.. ..+. ..+.+... .++++++|+|++++.++.++...++.|+++++.
T Consensus 149 lrp~~~~-~~~~~~~~~------------~~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 149 VMPPHIG-DQPLTGAYT------------VTLDGRGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp ECCSEEE-CCCCCSCCE------------EESSSCSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred EeCCccc-CCCCCcceE------------ecccCCCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence 9999984 3221 1110 00111110 488999999999999999877778999999874
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-26 Score=190.07 Aligned_cols=197 Identities=12% Similarity=0.016 Sum_probs=165.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|+||++++++|+++|++|++++|++.+.. ..+++++.+|++|.+++.++++ ++|+|||+|
T Consensus 9 TGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~A 72 (267)
T 3rft_A 9 TGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA--GCDGIVHLG 72 (267)
T ss_dssp ESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc--CCCEEEECC
Confidence 799999999999999999999999999976632 1579999999999999999999 999999999
Q ss_pred cC------------ChhcHHHHHHhCC--CCCcEEEeeccccccC-CCCCCCCCCCCCCCCccc-hhhHHHHHHhh----
Q 022578 81 GR------------EADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVLE---- 140 (295)
Q Consensus 81 ~~------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~---- 140 (295)
|. |..++.++++++. +.++||++||..+|+. ....+++|+.+..|.+.| .+|..+|.+++
T Consensus 73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~ 152 (267)
T 3rft_A 73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD 152 (267)
T ss_dssp SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 86 4567889999987 7789999999999975 345678888888887766 99999998874
Q ss_pred hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcc
Q 022578 141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY 220 (295)
Q Consensus 141 ~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~ 220 (295)
+.+++++++||+.+|++. +++....++++++|+++++..++..+...+.++++++++.
T Consensus 153 ~~g~~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~ 210 (267)
T 3rft_A 153 KFGQETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND 210 (267)
T ss_dssp HHCCCEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred HhCCeEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence 579999999999999872 2344566789999999999999988766566888888887
Q ss_pred cCHHHHHHHHHHHhCCC
Q 022578 221 VTFDGLARACAKVTGLL 237 (295)
Q Consensus 221 ~t~~e~~~~i~~~~g~~ 237 (295)
.++.++... +.+|.+
T Consensus 211 ~~~~~~~~~--~~~g~~ 225 (267)
T 3rft_A 211 AGWWDNSHL--GFLGWK 225 (267)
T ss_dssp TCCBCCGGG--GGGCCC
T ss_pred CCcccChhH--HHCCCC
Confidence 777766433 566655
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=177.83 Aligned_cols=192 Identities=17% Similarity=0.196 Sum_probs=141.4
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+|+||++++++|+++| ++|++++|++++...... .+++++.+|++|++++.++++ ++|+|||+
T Consensus 29 tGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-----------~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~ 95 (236)
T 3qvo_A 29 LGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----------TNSQIIMGDVLNHAALKQAMQ--GQDIVYAN 95 (236)
T ss_dssp ETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-----------TTEEEEECCTTCHHHHHHHHT--TCSEEEEE
T ss_pred EeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-----------CCcEEEEecCCCHHHHHHHhc--CCCEEEEc
Confidence 7999999999999999999 999999999877443322 579999999999999999999 99999999
Q ss_pred ccCCh--hcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEeccCeee
Q 022578 80 NGREA--DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY 155 (295)
Q Consensus 80 a~~~~--~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R~~~i~ 155 (295)
++... ..+++++++++ ++++||++||.++|+........... ..+..+...+..+|..++..+++++++|||.++
T Consensus 96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~ 174 (236)
T 3qvo_A 96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNN-AVIGEPLKPFRRAADAIEASGLEYTILRPAWLT 174 (236)
T ss_dssp CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC-----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEE
T ss_pred CCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchh-hcccchHHHHHHHHHHHHHCCCCEEEEeCCccc
Confidence 98642 35788899887 78899999999999865433222111 122234466777888889999999999999999
Q ss_pred cCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC-CCCceEEecCCcc
Q 022578 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKY 220 (295)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~~~~~~i~~~~~ 220 (295)
++..... ............+++++|+|++++.++.++. ..++.|++++++.
T Consensus 175 ~~~~~~~--------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 175 DEDIIDY--------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT 226 (236)
T ss_dssp CCSCCCC--------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred CCCCcce--------------EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence 9743210 0011111112357999999999999998876 5688999999763
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-26 Score=186.28 Aligned_cols=183 Identities=17% Similarity=0.135 Sum_probs=143.6
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+|+||++++++|+++|+ +|++++|++.. . ..+++++.+|++|++++.+++ +|+|||
T Consensus 11 tGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~--------------~~~~~~~~~D~~~~~~~~~~~----~d~vi~ 71 (215)
T 2a35_A 11 AGATGLTGEHLLDRILSEPTLAKVIAPARKALA-E--------------HPRLDNPVGPLAELLPQLDGS----IDTAFC 71 (215)
T ss_dssp ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-C--------------CTTEECCBSCHHHHGGGCCSC----CSEEEE
T ss_pred ECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-c--------------CCCceEEeccccCHHHHHHhh----hcEEEE
Confidence 69999999999999999998 99999998765 1 157888999999888777666 999999
Q ss_pred cccCC--------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhc
Q 022578 79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK 142 (295)
Q Consensus 79 ~a~~~--------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~ 142 (295)
+++.. ..++.++++++. +.++||++||..+|+. .+..|..+|..+|++++..
T Consensus 72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------~~~~y~~sK~~~e~~~~~~ 139 (215)
T 2a35_A 72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------SSIFYNRVKGELEQALQEQ 139 (215)
T ss_dssp CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHHTTS
T ss_pred CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC------------CccHHHHHHHHHHHHHHHc
Confidence 99863 346788999887 7889999999998752 1233559999999999999
Q ss_pred CCc-EEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccc
Q 022578 143 GVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221 (295)
Q Consensus 143 ~~~-~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~ 221 (295)
+++ ++++||+.+|||.....+...+ . +...++ ++ ..+++++++|+|++++.++.++. ++.|++++++.+
T Consensus 140 ~~~~~~~vrp~~v~g~~~~~~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~~ 209 (215)
T 2a35_A 140 GWPQLTIARPSLLFGPREEFRLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALEEG--KGVRFVESDELR 209 (215)
T ss_dssp CCSEEEEEECCSEESTTSCEEGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHHH
T ss_pred CCCeEEEEeCceeeCCCCcchHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHHH
Confidence 999 9999999999997643222211 1 122222 22 26789999999999999998864 679999988766
Q ss_pred CHH
Q 022578 222 TFD 224 (295)
Q Consensus 222 t~~ 224 (295)
++.
T Consensus 210 ~~~ 212 (215)
T 2a35_A 210 KLG 212 (215)
T ss_dssp HHH
T ss_pred Hhh
Confidence 554
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=178.50 Aligned_cols=186 Identities=18% Similarity=0.180 Sum_probs=142.8
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+|+||++++++|+++|+ +|++++|++....... ..++.++.+|++|++++.++++ ++|+|||
T Consensus 24 tGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 90 (242)
T 2bka_A 24 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC 90 (242)
T ss_dssp ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred ECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----------cCCceEEecCcCCHHHHHHHhc--CCCEEEE
Confidence 79999999999999999999 9999999876632111 1468899999999999999998 9999999
Q ss_pred cccCC-------------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcC
Q 022578 79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG 143 (295)
Q Consensus 79 ~a~~~-------------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~ 143 (295)
++|.. ..++.++++++. +.++||++||.++|+. .+..|..+|..+|.+++..+
T Consensus 91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------~~~~Y~~sK~~~e~~~~~~~ 158 (242)
T 2bka_A 91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------SNFLYLQVKGEVEAKVEELK 158 (242)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------CSSHHHHHHHHHHHHHHTTC
T ss_pred CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC------------CcchHHHHHHHHHHHHHhcC
Confidence 99863 456788888886 7789999999998752 12345599999999999999
Q ss_pred C-cEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecC
Q 022578 144 V-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217 (295)
Q Consensus 144 ~-~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~ 217 (295)
+ +++++|||.+|||.........+........+.. ++ ...+++++|+|++++.++.++.. ++.+++.+
T Consensus 159 ~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~ 227 (242)
T 2bka_A 159 FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDS-WA----SGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN 227 (242)
T ss_dssp CSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTT-GG----GGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred CCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCcc-cc----CCcccCHHHHHHHHHHHHhCccc-cCeeEeeH
Confidence 9 5999999999999653333333433333322211 11 12489999999999999988654 34665543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=175.75 Aligned_cols=193 Identities=19% Similarity=0.233 Sum_probs=144.0
Q ss_pred CCcCCcchHHHHHHHH-HCCCeEEEEecCCC-ccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+|+||++++++|+ ++|++|++++|+++ +.... .....+++++.+|++|++++.++++ ++|+|||
T Consensus 11 tGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~ 79 (221)
T 3r6d_A 11 LGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE---------IIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFV 79 (221)
T ss_dssp ESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHH---------HHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred EeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhh---------ccCCCceEEEECCCCCHHHHHHHHc--CCCEEEE
Confidence 7999999999999999 89999999999977 53211 1123679999999999999999999 9999999
Q ss_pred cccC-ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCC-ccchhhHHHHHHhhhcCCcEEEeccCee
Q 022578 79 INGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVLESKGVNWTSLRPVYI 154 (295)
Q Consensus 79 ~a~~-~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~~~~~k~~~E~~~~~~~~~~~i~R~~~i 154 (295)
++|. |.. +++++++++ +.++||++||..+|+..+.....+..+ ... .|..+|..+|.+++..+++++++|||.+
T Consensus 80 ~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~-~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v 157 (221)
T 3r6d_A 80 GAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFD-NLPISYVQGERQARNVLRESNLNYTILRLTWL 157 (221)
T ss_dssp SCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHH-TSCHHHHHHHHHHHHHHHHSCSEEEEEEECEE
T ss_pred cCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccc-ccccHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence 9987 555 899999987 788999999999886432110000000 111 4569999999999999999999999999
Q ss_pred ecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh--cCCC-CCCceEEecCCc
Q 022578 155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL--GNEK-ASRQVFNISGEK 219 (295)
Q Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~--~~~~-~~~~~~~i~~~~ 219 (295)
+++..... .............+++.+|+|++++.++ .++. ..++.+.++++.
T Consensus 158 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 158 YNDPEXTD-------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp ECCTTCCC-------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred cCCCCCcc-------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence 99832111 1011111111124799999999999999 7655 456778887654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.9e-23 Score=170.00 Aligned_cols=200 Identities=19% Similarity=0.155 Sum_probs=138.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC--CCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~ 78 (295)
|||+|+||++++++|+++|++|++++|++++.. . .+.+|+++.+++.+++++. ++|+|||
T Consensus 7 tGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~ 68 (255)
T 2dkn_A 7 TGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------A---DLSTPGGRETAVAAVLDRCGGVLDGLVC 68 (255)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C---CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred eCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------c---cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence 799999999999999999999999999876521 1 1568999999998888654 8999999
Q ss_pred cccCC-------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCC-CC-------CCC-------CCC
Q 022578 79 INGRE-------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLP-HC-------ETD-------TVD 124 (295)
Q Consensus 79 ~a~~~-------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~-~~-------e~~-------~~~ 124 (295)
+||.. ..++.++++++. +.+++|++||..+|+.....+ .. |+. ...
T Consensus 69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
T 2dkn_A 69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ 148 (255)
T ss_dssp CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 99863 335666666542 458999999999986532111 00 000 011
Q ss_pred CCc-cchhhHHHHHHhhh-------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKS-RHKGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~-~~~~k~~~E~~~~~-------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
+.. |..+|..+|.+++. .+++++++|||.++++.. ..++.....+....... + ....+++++|+|
T Consensus 149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~-----~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva 221 (255)
T 2dkn_A 149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL-----QASKADPRYGESTRRFV-A-PLGRGSEPREVA 221 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH-----HHHHHCTTTHHHHHSCC-C-TTSSCBCHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh-----hhcccchhhHHHHHHHH-H-HhcCCCCHHHHH
Confidence 233 44999999987742 589999999999999732 11111000000011111 1 334689999999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCcccCHHH
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEKYVTFDG 225 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~~~t~~e 225 (295)
++++.++.++ ...|+.|+++++..++++|
T Consensus 222 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 222 EAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred HHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 9999999865 3468899999987766544
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.2e-21 Score=159.52 Aligned_cols=212 Identities=15% Similarity=0.124 Sum_probs=148.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ .++ ....++.++.+|++|++++.+++++. ++|+
T Consensus 22 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 95 (278)
T 2bgk_A 22 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-----NNI-GSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 95 (278)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHH-----HHh-CCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999765421100 000 00126899999999999998888642 7999
Q ss_pred EEEcccCC----------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE----------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~----------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|||+||.. ..++.++++++. +..++|++||...|.... .....
T Consensus 96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~~~ 166 (278)
T 2bgk_A 96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---------GVSHV 166 (278)
T ss_dssp EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---------TSCHH
T ss_pred EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC---------CCCcc
Confidence 99999852 123444444432 567999999998875321 01123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch--HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
|..+|...|.+.+ ..+++++++|||.++++...... ............+. ....+++++|+|++
T Consensus 167 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~ 239 (278)
T 2bgk_A 167 YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-------LKGTLLRAEDVADA 239 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-------SCSCCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccc-------cccccCCHHHHHHH
Confidence 5599999988763 35899999999999998643211 12222222221111 12346899999999
Q ss_pred HHHHhcCC--CCCCceEEecCCcccCHHHHHHHHHHHh
Q 022578 199 FVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVT 234 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~~~t~~e~~~~i~~~~ 234 (295)
++.++.++ ...|+.|++.++..+++.|+++.+++.+
T Consensus 240 ~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 240 VAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred HHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 99998753 3458899999999999999999886543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.9e-21 Score=160.45 Aligned_cols=213 Identities=17% Similarity=0.137 Sum_probs=148.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+.+..... ......++.++.+|++|.+++.+++++. ++|+
T Consensus 11 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 11 TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL--------VAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH--------HHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 79999999999999999999999999987663211 1222357999999999999999888754 7999
Q ss_pred EEEcccC--------------------Chhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-c
Q 022578 76 VYDINGR--------------------EADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~ 128 (295)
|||+||. |..+ ++.++..++ +..++|++||...+.. ..+.. |
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y 151 (281)
T 3m1a_A 83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS-----------FAGFSAY 151 (281)
T ss_dssp EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC-----------CCCchHH
Confidence 9999986 2233 555555555 6789999999876532 12233 4
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC------chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
..+|+..|.+.+ ..|+++++++||.++++.... .....+.........+.. ......+.+++|+
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dv 228 (281)
T 3m1a_A 152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQ---GSDGSQPGDPAKA 228 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHH---C-----CBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHh---hccCCCCCCHHHH
Confidence 599999988763 268999999999998874210 011111111111111111 1123456889999
Q ss_pred HHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 196 a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
|++++.++.++.. +..|+++++......+.+..+.+.++.
T Consensus 229 a~a~~~~~~~~~~-~~~~~l~s~~~~~i~g~~~~i~~~~~~ 268 (281)
T 3m1a_A 229 AAAIRLALDTEKT-PLRLALGGDAVDFLTGHLDSVRAELTE 268 (281)
T ss_dssp HHHHHHHHHSSSC-CSEEEESHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC-CeEEecCchHHHHHHHHHHHHHHHHHH
Confidence 9999999988654 568999888777777777777776653
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=154.63 Aligned_cols=199 Identities=14% Similarity=0.123 Sum_probs=140.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++...... ..++.....++.++.+|++|++++.+++++. ++|+
T Consensus 17 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 91 (255)
T 1fmc_A 17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHV-----VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999986542211 1112222357889999999999998887642 7999
Q ss_pred EEEcccCC-------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE-------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~-------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
|||+||.. ..++.++++++ + +..+||++||...+.... ....|..
T Consensus 92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~~ 161 (255)
T 1fmc_A 92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI----------NMTSYAS 161 (255)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT----------TCHHHHH
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC----------CCcccHH
Confidence 99999852 22344455554 2 678999999988764211 1123459
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|...|.+.+ ..+++++++|||.++++.........+......+.+. ..+++++|+|++++.++
T Consensus 162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~ 232 (255)
T 1fmc_A 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFLC 232 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHHh
Confidence 9999988763 2489999999999998742211122333333333332 23578999999999998
Q ss_pred cCCC--CCCceEEecCCcccCH
Q 022578 204 GNEK--ASRQVFNISGEKYVTF 223 (295)
Q Consensus 204 ~~~~--~~~~~~~i~~~~~~t~ 223 (295)
.++. ..|+.|+++++..+|+
T Consensus 233 ~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 233 SPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp SGGGTTCCSCEEEESTTSCCCC
T ss_pred CCccccCCCcEEEECCceeccC
Confidence 7542 3578999999887664
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-20 Score=152.38 Aligned_cols=193 Identities=15% Similarity=0.174 Sum_probs=136.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|+||++++++|+++|++|++++|++..... +.....+++++.+|++|++++.++++.. .+|+|||+
T Consensus 13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 13 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS---------LAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 83 (244)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence 7999999999999999999999999998755211 1111246788899999999999999743 48999999
Q ss_pred ccC--------------------ChhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 80 NGR--------------------EADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 80 a~~--------------------~~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
||. |..++.++++++. + .++||++||...|.... ....|..+|
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~~sK 153 (244)
T 1cyd_A 84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------NLITYSSTK 153 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------TBHHHHHHH
T ss_pred CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC----------CcchhHHHH
Confidence 985 2334445555542 3 57999999988764321 112345999
Q ss_pred HHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 133 ~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+..|.+++ ..+++++++|||.++++.... .....++..+..+.+ ...+++++|+|++++.++.
T Consensus 154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~ 224 (244)
T 1cyd_A 154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDVVNSILFLLS 224 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHHHHHHHHHhC
Confidence 99988764 258999999999999874210 001222233333222 2467999999999999997
Q ss_pred CCC--CCCceEEecCCccc
Q 022578 205 NEK--ASRQVFNISGEKYV 221 (295)
Q Consensus 205 ~~~--~~~~~~~i~~~~~~ 221 (295)
++. ..|+.+++.++..+
T Consensus 225 ~~~~~~~G~~~~v~gG~~~ 243 (244)
T 1cyd_A 225 DRSASTSGGGILVDAGYLA 243 (244)
T ss_dssp GGGTTCCSSEEEESTTGGG
T ss_pred chhhcccCCEEEECCCccC
Confidence 642 35788999887543
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-20 Score=155.65 Aligned_cols=212 Identities=17% Similarity=0.186 Sum_probs=144.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++|++....... ..+.+. ..++.++.+|++|.+++.++++.. .+|
T Consensus 32 TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 106 (302)
T 1w6u_A 32 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-----EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 106 (302)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999875522110 011111 356899999999999998888743 679
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC------C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~------~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+|||+||.. ..++.++++++ + +..++|++||...+.... ....
T Consensus 107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~ 176 (302)
T 1w6u_A 107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG----------FVVP 176 (302)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT----------TCHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC----------Ccch
Confidence 999999852 22344444443 2 457999999987754311 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-H-HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-E-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
|..+|+..|.+.+ ..|++++++|||.++++...... . ...........+. ..+++++|+|++
T Consensus 177 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~ 247 (302)
T 1w6u_A 177 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GRLGTVEELANL 247 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SSCBCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc---------CCCCCHHHHHHH
Confidence 4599999988763 26899999999999987421110 0 0111122222211 236789999999
Q ss_pred HHHHhcCCC--CCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 199 FVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
++.++.... ..|+.|++.++..+++.++++.+.+..|.
T Consensus 248 ~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 248 AAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred HHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence 999987532 35889999999888888888777766553
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=143.09 Aligned_cols=186 Identities=17% Similarity=0.186 Sum_probs=136.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+...... .++.++.+|++|++++.+++++. ++|+
T Consensus 34 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 99 (260)
T 3un1_A 34 TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD--------------PDIHTVAGDISKPETADRIVREGIERFGRIDS 99 (260)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS--------------TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------------CceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence 7999999999999999999999999998765221 36899999999999998888753 8999
Q ss_pred EEEcccC--------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-c
Q 022578 76 VYDINGR--------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~ 128 (295)
+||+||. |..++.++++++ . +..++|++||...+.... ..+.. |
T Consensus 100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y 170 (260)
T 3un1_A 100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMV---------GMPSALA 170 (260)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBT---------TCCCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCC---------CCccHHH
Confidence 9999986 233455555554 2 667999999987653221 11223 3
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|+..+.+.+ ..|+++..++||.++++...... ........+ ...+.+++|+|++++.
T Consensus 171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~p---------~~r~~~~~dva~av~~ 237 (260)
T 3un1_A 171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET----HSTLAGLHP---------VGRMGEIRDVVDAVLY 237 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG----HHHHHTTST---------TSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH----HHHHhccCC---------CCCCcCHHHHHHHHHH
Confidence 489999888763 24899999999999998643221 111222222 1245679999999999
Q ss_pred HhcCCCCCCceEEecCCcccC
Q 022578 202 VLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 202 ~~~~~~~~~~~~~i~~~~~~t 222 (295)
+.......|+.+++.++..++
T Consensus 238 L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 238 LEHAGFITGEILHVDGGQNAG 258 (260)
T ss_dssp HHHCTTCCSCEEEESTTGGGC
T ss_pred hcccCCCCCcEEEECCCeecc
Confidence 966655678999999986543
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.5e-19 Score=145.38 Aligned_cols=196 Identities=13% Similarity=0.190 Sum_probs=136.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++...... ...+.....++.++.+|++|++++.+++++. ++|+
T Consensus 19 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 93 (260)
T 3awd_A 19 TGGAQNIGLACVTALAEAGARVIIADLDEAMATKA-----VEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI 93 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986542211 0111222357899999999999998888642 7999
Q ss_pred EEEcccCCh---------------------hcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCC-Cc
Q 022578 76 VYDINGREA---------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KS 127 (295)
Q Consensus 76 vi~~a~~~~---------------------~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~ 127 (295)
|||+||... .++.++++++. +..++|++||...+.... ..| ..
T Consensus 94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------~~~~~~ 164 (260)
T 3awd_A 94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNR---------PQQQAA 164 (260)
T ss_dssp EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS---------SSCCHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCC---------CCCccc
Confidence 999998522 23444444432 567999999987653211 112 23
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|+..|.+++ ..+++++++|||.++++... ......+...+..+.+. ..+++++|+|+++
T Consensus 165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~ 235 (260)
T 3awd_A 165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM---------GRVGQPDEVASVV 235 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT---------SSCBCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc---------CCCCCHHHHHHHH
Confidence 4599999988764 26899999999999998642 11112233333333221 2367899999999
Q ss_pred HHHhcCC--CCCCceEEecCCc
Q 022578 200 VQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+.++.+. ...|+.|++.++.
T Consensus 236 ~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 236 QFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp HHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhCchhccCCCcEEEECCce
Confidence 9998753 2467899998874
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.6e-19 Score=144.37 Aligned_cols=192 Identities=13% Similarity=0.149 Sum_probs=133.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|+||++++++|+++|++|++++|++++... +.....+++++.+|++|++++.++++.. ++|+|||+
T Consensus 13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 3d3w_A 13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDS---------LVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence 7999999999999999999999999998655221 1111236788899999999999999743 58999999
Q ss_pred ccCC--------------------hhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCCCCCCCCCc-cchh
Q 022578 80 NGRE--------------------ADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKG 131 (295)
Q Consensus 80 a~~~--------------------~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~~ 131 (295)
||.. ..++.++++++. + ..++|++||...+... .+.. |..+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s 152 (244)
T 3d3w_A 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-----------TNHSVYCST 152 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTBHHHHHH
T ss_pred CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC-----------CCCchHHHH
Confidence 9862 223334444432 3 6799999998875321 1223 4599
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
|+..|.+.+ ..+++++++|||.++++..... ...........+.+ ...+++++|+|++++.++
T Consensus 153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~ 223 (244)
T 3d3w_A 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP---------LGKFAEVEHVVNAILFLL 223 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCT---------TCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCC---------CCCCcCHHHHHHHHHHHc
Confidence 999998763 2589999999999999742100 00011122222211 135689999999999999
Q ss_pred cCC--CCCCceEEecCCccc
Q 022578 204 GNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 204 ~~~--~~~~~~~~i~~~~~~ 221 (295)
.+. ...|+.|++.++...
T Consensus 224 ~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 224 SDRSGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp SGGGTTCCSCEEEESTTGGG
T ss_pred CccccCCCCCEEEECCCccC
Confidence 753 236889999887543
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=7.2e-19 Score=146.98 Aligned_cols=210 Identities=16% Similarity=0.170 Sum_probs=132.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh---hhccCCeEEEEecCCChHHHHHhhhcC-----C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAK-----G 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~ 72 (295)
|||+|+||++++++|+++|++|++++|++....... .++ .....++.++.+|++|++++.+++++. +
T Consensus 12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (278)
T 1spx_A 12 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 86 (278)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence 799999999999999999999999999865422110 001 011246889999999999998888643 7
Q ss_pred CcEEEEcccCCh------------------------hcHHHHHHh----CC-CCCcEEEeecccc-ccCCCCCCCCCCCC
Q 022578 73 FDVVYDINGREA------------------------DEVEPILDA----LP-NLEQFIYCSSAGV-YLKSDLLPHCETDT 122 (295)
Q Consensus 73 ~d~vi~~a~~~~------------------------~~~~~ll~~----~~-~~~~~i~~Ss~~v-~~~~~~~~~~e~~~ 122 (295)
+|++||+||... .++.+++++ ++ ...++|++||... +....
T Consensus 87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 157 (278)
T 1spx_A 87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP--------- 157 (278)
T ss_dssp CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT---------
T ss_pred CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCC---------
Confidence 999999998521 122333333 32 2389999999876 43211
Q ss_pred CCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch--HHHH------HHHHHcCCCcccCCCCCcee
Q 022578 123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWF------FHRLKAGRPIPIPGSGIQVT 187 (295)
Q Consensus 123 ~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~ 187 (295)
....|..+|+..+.+.+ ..|+++++++||.++++...... .... ........+ ..
T Consensus 158 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~ 227 (278)
T 1spx_A 158 -DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP---------AG 227 (278)
T ss_dssp -TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT---------TS
T ss_pred -CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC---------Cc
Confidence 11224599999888763 36899999999999998532110 0000 111111111 12
Q ss_pred eeeeHHHHHHHHHHHhcCCC---CCCceEEecCCcccCHHHHHHHHHHHh
Q 022578 188 QLGHVKDLARAFVQVLGNEK---ASRQVFNISGEKYVTFDGLARACAKVT 234 (295)
Q Consensus 188 ~~i~~~D~a~~i~~~~~~~~---~~~~~~~i~~~~~~t~~e~~~~i~~~~ 234 (295)
.+++++|+|++++.++..+. ..|+.|++.++..+++.++++.+++.+
T Consensus 228 ~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 228 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred CCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 36889999999999987543 458899999999999999999998764
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.7e-19 Score=144.47 Aligned_cols=186 Identities=16% Similarity=0.183 Sum_probs=134.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC----CCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~v 76 (295)
|||+|+||++++++|+++|++|++++|++.. .++.++.+|++|++++.+++++. ++|++
T Consensus 8 tGasggiG~~la~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l 70 (242)
T 1uay_A 8 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV 70 (242)
T ss_dssp ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEccCccc-----------------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence 7999999999999999999999999998762 34688999999999999888743 78999
Q ss_pred EEcccCC------------------------hhcHHHHHHhCC----C-----C---CcEEEeeccccccCCCCCCCCCC
Q 022578 77 YDINGRE------------------------ADEVEPILDALP----N-----L---EQFIYCSSAGVYLKSDLLPHCET 120 (295)
Q Consensus 77 i~~a~~~------------------------~~~~~~ll~~~~----~-----~---~~~i~~Ss~~v~~~~~~~~~~e~ 120 (295)
||++|.. ..++.++++++. . . .+||++||...+....
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------- 143 (242)
T 1uay_A 71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI------- 143 (242)
T ss_dssp EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-------
Confidence 9999852 123444555432 1 1 2899999998875321
Q ss_pred CCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 022578 121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 121 ~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (295)
....|..+|...+.+.+ ..+++++++|||.++++.... ....+...+....+. . ..+++++
T Consensus 144 ---~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~--~------~~~~~~~ 211 (242)
T 1uay_A 144 ---GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--P------PRLGRPE 211 (242)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--S------CSCCCHH
T ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCCC--c------ccCCCHH
Confidence 11234589998887753 348999999999999874211 112222333333221 1 2367899
Q ss_pred HHHHHHHHHhcCCCCCCceEEecCCcccC
Q 022578 194 DLARAFVQVLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 194 D~a~~i~~~~~~~~~~~~~~~i~~~~~~t 222 (295)
|+|++++.++.+....|+.|++.++..++
T Consensus 212 dva~~~~~l~~~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 212 EYAALVLHILENPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp HHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence 99999999998755678899999886553
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-19 Score=150.63 Aligned_cols=202 Identities=17% Similarity=0.202 Sum_probs=138.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+.+...+. ..+...++.++.+|++|++++.+++++. ++|+
T Consensus 14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 14 TGSARGIGRAFAEAYVREGATVAIADIDIERARQA--------AAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1222357889999999999998888753 8999
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR--------------------EADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||. |..++.++++++. + ..++|++||...+.... ....|
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 155 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA----------LVAIY 155 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------TBHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC----------CChHH
Confidence 9999986 2234555555543 2 56999999988753211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcC---CCcccCCCCCceeeeeeHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..+|+..+.+.+ ..++++..++||.++++.... ...++...... ......++......+.+++|+|++
T Consensus 156 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 233 (259)
T 4e6p_A 156 CATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG--VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGM 233 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH--HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh--hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHH
Confidence 599999988763 358999999999999984211 11111111111 111111122233467899999999
Q ss_pred HHHHhcCC--CCCCceEEecCCcccC
Q 022578 199 FVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
++.++... ...|+.|++.++..+|
T Consensus 234 v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 234 AIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp HHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred HHHHhCCccCCCCCCEEEECcChhcC
Confidence 99988653 2358999999987654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-19 Score=149.42 Aligned_cols=213 Identities=19% Similarity=0.163 Sum_probs=150.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc---CCeEEEEecCCChHHHHHhhhcC-----C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAK-----G 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~-----~ 72 (295)
|||+|+||++++++|+++|++|++++|+++...... .++.+.. .++.++.+|++|++++.+++++. +
T Consensus 17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (281)
T 3svt_A 17 TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAV-----QELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR 91 (281)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 799999999999999999999999999876532111 1111111 26889999999999998888753 7
Q ss_pred CcEEEEcccC---------------------ChhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGR---------------------EADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 73 ~d~vi~~a~~---------------------~~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+|++||+||. |..++.++++++. +..++|++||...+.... ..
T Consensus 92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~ 161 (281)
T 3svt_A 92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR----------WF 161 (281)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT----------TC
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC----------CC
Confidence 8999999986 2223445555432 445999999988764321 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..++++..++||.++++..... .............+. ..+.+++|+|+
T Consensus 162 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~ 232 (281)
T 3svt_A 162 GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL---------PRQGEVEDVAN 232 (281)
T ss_dssp THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS---------SSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHHH
Confidence 235599999988763 3579999999999998742110 001122222222222 23467999999
Q ss_pred HHHHHhcCCC--CCCceEEecCCcccC-HHHHHHHHHHHhCCC
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEKYVT-FDGLARACAKVTGLL 237 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~~~t-~~e~~~~i~~~~g~~ 237 (295)
+++.++.+.. ..|+.|++.++..++ ..++++.+.+.+|.+
T Consensus 233 ~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 233 MAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred HHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence 9999987633 368999999998776 788999999999876
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-18 Score=142.30 Aligned_cols=195 Identities=14% Similarity=0.238 Sum_probs=134.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++|+++...... ..+ .....++.++.+|++|++++.+++++. ++|
T Consensus 8 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (250)
T 2cfc_A 8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETA-----RTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID 82 (250)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999875522110 000 111246899999999999998888642 799
Q ss_pred EEEEcccCCh-----------------------hcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 75 VVYDINGREA-----------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 75 ~vi~~a~~~~-----------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+|||+||... .++ +.++..+. +.+++|++||...+.... ..
T Consensus 83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~ 152 (250)
T 2cfc_A 83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFP----------GR 152 (250)
T ss_dssp EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TC
T ss_pred EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC----------Cc
Confidence 9999998521 112 23344443 678999999987753211 12
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|...|.+.+ ..+++++++|||.++++...... ...+...+....+. ..+.+++|+|+
T Consensus 153 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~ 223 (250)
T 2cfc_A 153 SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ---------KEIGTAAQVAD 223 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT---------CSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence 234599999988763 24899999999999998642101 11222223222221 23578999999
Q ss_pred HHHHHhcCCC--CCCceEEecCCc
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+++.++.++. ..|+.+++.++.
T Consensus 224 ~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 224 AVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp HHHHHHSTTCTTCCSCEEEESTTG
T ss_pred HHHHHcCchhhcccCCEEEECCce
Confidence 9999997643 358899998874
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.78 E-value=5e-19 Score=146.98 Aligned_cols=197 Identities=13% Similarity=0.119 Sum_probs=124.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc------CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d 74 (295)
|||+|+||++++++|+++|++|++++|++....... .++.....++.++.+|+++.+++.++++. .++|
T Consensus 20 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 94 (266)
T 1xq1_A 20 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD 94 (266)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence 799999999999999999999999999865522110 11122234688999999999998888853 3799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+|||+||.. ..++.++++++ + +.+++|++||...+.... ....|
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y 164 (266)
T 1xq1_A 95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS----------VGSIY 164 (266)
T ss_dssp EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------CCHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCC----------CCchH
Confidence 999999852 23445566665 3 678999999987754211 11235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|+..|.+.+ ..+++++++|||.++++.........+....... .....+++++|+|++++.
T Consensus 165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~ 235 (266)
T 1xq1_A 165 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISR---------KPLGRFGEPEEVSSLVAF 235 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHH
Confidence 599999988763 2589999999999999854221111111111111 111246789999999999
Q ss_pred HhcCC--CCCCceEEecCCccc
Q 022578 202 VLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~~ 221 (295)
++..+ ...|+.+++.++..+
T Consensus 236 l~~~~~~~~~G~~~~v~gG~~~ 257 (266)
T 1xq1_A 236 LCMPAASYITGQTICVDGGLTV 257 (266)
T ss_dssp HTSGGGTTCCSCEEECCCCEEE
T ss_pred HcCccccCccCcEEEEcCCccc
Confidence 98753 235889999988643
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=139.01 Aligned_cols=163 Identities=13% Similarity=0.097 Sum_probs=122.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|+||++++++|+ +|++|++++|++. .+.+|+++++++.+++++. ++|+|||+
T Consensus 9 tGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ 65 (202)
T 3d7l_A 9 IGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------DVTVDITNIDSIKKMYEQVGKVDAIVSA 65 (202)
T ss_dssp ETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred EcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence 7999999999999999 9999999998753 3678999999999998843 48999999
Q ss_pred ccC--------------------ChhcHHHHHHhCC-C---CCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHH
Q 022578 80 NGR--------------------EADEVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNT 135 (295)
Q Consensus 80 a~~--------------------~~~~~~~ll~~~~-~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~ 135 (295)
+|. |..++.++++++. . ..++|++||...+... .....|..+|...
T Consensus 66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~Y~~sK~~~ 135 (202)
T 3d7l_A 66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI----------VQGASAAMANGAV 135 (202)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC----------TTCHHHHHHHHHH
T ss_pred CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC----------CccHHHHHHHHHH
Confidence 984 3345667888876 2 4799999998764321 1112345999999
Q ss_pred HHHhhh------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 136 ESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 136 E~~~~~------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
|.+.+. .+++++++|||.++++.. . . +. ......+++++|+|++++.++.+ ...
T Consensus 136 ~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~------~----~--~~-------~~~~~~~~~~~dva~~~~~~~~~-~~~ 195 (202)
T 3d7l_A 136 TAFAKSAAIEMPRGIRINTVSPNVLEESWD------K----L--EP-------FFEGFLPVPAAKVARAFEKSVFG-AQT 195 (202)
T ss_dssp HHHHHHHTTSCSTTCEEEEEEECCBGGGHH------H----H--GG-------GSTTCCCBCHHHHHHHHHHHHHS-CCC
T ss_pred HHHHHHHHHHccCCeEEEEEecCccCCchh------h----h--hh-------hccccCCCCHHHHHHHHHHhhhc-ccc
Confidence 988743 389999999999998721 1 1 11 11234679999999999988854 345
Q ss_pred CceEEec
Q 022578 210 RQVFNIS 216 (295)
Q Consensus 210 ~~~~~i~ 216 (295)
|+.|++.
T Consensus 196 G~~~~vd 202 (202)
T 3d7l_A 196 GESYQVY 202 (202)
T ss_dssp SCEEEEC
T ss_pred CceEecC
Confidence 7788863
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=144.64 Aligned_cols=201 Identities=15% Similarity=0.142 Sum_probs=129.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-------CCeEEEEecCCChHHHHHhhhcC--
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-------SKILHLKGDRKDYDFVKSSLSAK-- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~D~~~~~~~~~~~~~~-- 71 (295)
|||+|+||.+++++|+++|++|++++|++........ .+.+.. .++.++.+|++|.+++.++++..
T Consensus 13 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (264)
T 2pd6_A 13 TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVR-----LLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQA 87 (264)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----TC------------CCEEEECCTTSHHHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 7999999999999999999999999998765321100 000001 46889999999999998888742
Q ss_pred ---CC-cEEEEcccCC--------------------hhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCCC
Q 022578 72 ---GF-DVVYDINGRE--------------------ADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCET 120 (295)
Q Consensus 72 ---~~-d~vi~~a~~~--------------------~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~ 120 (295)
.+ |+|||+||.. ..++.++++++. + ..+||++||...+....
T Consensus 88 ~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 160 (264)
T 2pd6_A 88 CFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV------- 160 (264)
T ss_dssp HHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT-------
T ss_pred HhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC-------
Confidence 34 9999999852 224555555543 3 56999999986543211
Q ss_pred CCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 022578 121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 121 ~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (295)
....|..+|...+.+.+ ..+++++++|||.++++.... ....+......+. ....+++++
T Consensus 161 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~ 227 (264)
T 2pd6_A 161 ---GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEMI---------PMGHLGDPE 227 (264)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGC---------TTCSCBCHH
T ss_pred ---CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHhC---------CCCCCCCHH
Confidence 11234499998887753 368999999999999985421 1111111111111 112467899
Q ss_pred HHHHHHHHHhcCC--CCCCceEEecCCcccCHHHH
Q 022578 194 DLARAFVQVLGNE--KASRQVFNISGEKYVTFDGL 226 (295)
Q Consensus 194 D~a~~i~~~~~~~--~~~~~~~~i~~~~~~t~~e~ 226 (295)
|+|++++.++.++ ...|+.+++.++..++...+
T Consensus 228 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 228 DVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred HHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence 9999999998753 24688999999876655443
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=143.89 Aligned_cols=199 Identities=14% Similarity=0.150 Sum_probs=135.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++|++++..... .++... ..++.++.+|++|++++.+++++. ++|
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (263)
T 3ai3_A 13 TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA-----RSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD 87 (263)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999865522110 111111 346889999999999998888643 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..++.+++++ +. +..++|++||...+.... ....|
T Consensus 88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 157 (263)
T 3ai3_A 88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW----------YEPIY 157 (263)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TCHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC----------CcchH
Confidence 999999862 2233344444 33 668999999988764321 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch----------HHHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
..+|...+.+.+ ..|++++++|||.+++|...... ...+........ . ....+++
T Consensus 158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----p~~~~~~ 229 (263)
T 3ai3_A 158 NVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH---A-----PIKRFAS 229 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH---C-----TTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC---C-----CCCCCcC
Confidence 599999887763 36899999999999997321100 001111111110 1 1124688
Q ss_pred HHHHHHHHHHHhcCCC--CCCceEEecCCcccC
Q 022578 192 VKDLARAFVQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
++|+|++++.++..+. ..|+.|++.++..++
T Consensus 230 ~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 230 PEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp HHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 9999999999987643 358899999987654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-19 Score=145.45 Aligned_cols=195 Identities=15% Similarity=0.215 Sum_probs=113.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+..... ..++.+...++.++.+|++|++++.+++++. ++|+
T Consensus 15 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 89 (253)
T 3qiv_A 15 TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAV-----AKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY 89 (253)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1112222457889999999999998888753 8999
Q ss_pred EEEcccCC-----------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE-----------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 76 vi~~a~~~-----------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
+||+||.. ..+ ++.++..+. +..++|++||...|.. ..
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------~~ 156 (253)
T 3qiv_A 90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY-------------SN 156 (253)
T ss_dssp EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC-------------Cc
Confidence 99999861 112 333444443 6679999999887621 12
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.|..+|+..+.+.+ ..++++..++||.++++.........+...+.++. ....+.+++|+|+++
T Consensus 157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~ 227 (253)
T 3qiv_A 157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL---------PLSRMGTPDDLVGMC 227 (253)
T ss_dssp ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccC---------CCCCCCCHHHHHHHH
Confidence 25589998887763 34799999999999998543221111222222221 223445689999999
Q ss_pred HHHhcCCC--CCCceEEecCCcccC
Q 022578 200 VQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
+.++.+.. ..|+.|++.++..++
T Consensus 228 ~~l~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 228 LFLLSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp HHHHSGGGTTCCSCEEEC-------
T ss_pred HHHcCccccCCCCCEEEECCCeecC
Confidence 99987533 368999999987543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.1e-18 Score=140.55 Aligned_cols=195 Identities=17% Similarity=0.217 Sum_probs=138.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ ..++.....++.++.+|++|.+++++++++. ++|+
T Consensus 10 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 85 (246)
T 3osu_A 10 TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV----VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV 85 (246)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999888654311111 1112223357889999999999998888753 8999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|.
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 155 (246)
T 3osu_A 86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP----------GQANYV 155 (246)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TCHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC----------CChHHH
Confidence 99999862 23455566654 3 667999999977653321 112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|+++..++||.+.++.... ...........+.+. ..+.+++|+|++++.+
T Consensus 156 ~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~l 225 (246)
T 3osu_A 156 ATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPL---------ARFGQDTDIANTVAFL 225 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence 99998887753 468999999999999986432 223344444444332 2346789999999999
Q ss_pred hcCCC--CCCceEEecCCc
Q 022578 203 LGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~ 219 (295)
+.++. ..|+.|++.++.
T Consensus 226 ~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 226 ASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp TSGGGTTCCSCEEEESTTS
T ss_pred hCccccCCCCCEEEeCCCc
Confidence 87543 358899998874
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.9e-18 Score=139.46 Aligned_cols=194 Identities=14% Similarity=0.169 Sum_probs=132.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++|+++...... ..+.. ...++.++.+|++|++++.+++++. ++|
T Consensus 13 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 87 (248)
T 2pnf_A 13 TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVA-----EEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID 87 (248)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999999999999865421110 01111 2346889999999999998888642 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+|||+||.. ..++.+++++ +. +.+++|++||...+.... ....|
T Consensus 88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y 157 (248)
T 2pnf_A 88 ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV----------GQVNY 157 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT----------TCHHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC----------CCchH
Confidence 999999852 2234334443 32 668999999976543211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+.+ ..+++++++|||.++++.... ....+........+ ...+++++|+|++++.
T Consensus 158 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~ 227 (248)
T 2pnf_A 158 STTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIP---------LGRFGSPEEVANVVLF 227 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCC---------CCCccCHHHHHHHHHH
Confidence 589998887763 358999999999999875321 11122222222211 1246889999999999
Q ss_pred HhcCC--CCCCceEEecCCc
Q 022578 202 VLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~ 219 (295)
++.+. ...|+.|++.++.
T Consensus 228 l~~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 228 LCSELASYITGEVIHVNGGM 247 (248)
T ss_dssp HHSGGGTTCCSCEEEESTTC
T ss_pred HhCchhhcCCCcEEEeCCCc
Confidence 98753 3458899998863
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=6.5e-18 Score=140.59 Aligned_cols=192 Identities=16% Similarity=0.121 Sum_probs=137.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+....... ..+...++.++.+|++|.+++.++++.. .+|+
T Consensus 17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 17 TGACGGIGLETSRVLARAGARVVLADLPETDLAGA--------AASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH--------HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987663211 1222357889999999999998888753 7999
Q ss_pred EEEcccCC----------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE----------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~----------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~ 158 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD----------MSTA 158 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCS----------SCHH
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCC----------CChH
Confidence 99999863 11344455554 3 567999999988753211 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|...+.+.+ ..|+++..++||.++++..................+. ..+.+++|+|++++
T Consensus 159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~dvA~~v~ 229 (271)
T 3tzq_B 159 YACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA---------GRIGEPHEIAELVC 229 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT---------SSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence 4599999987763 3689999999999999865422222333333332221 13467999999999
Q ss_pred HHhcCC--CCCCceEEecCCc
Q 022578 201 QVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~ 219 (295)
.++.+. ...|+.+++.++.
T Consensus 230 ~L~s~~~~~itG~~i~vdGG~ 250 (271)
T 3tzq_B 230 FLASDRAAFITGQVIAADSGL 250 (271)
T ss_dssp HHHSGGGTTCCSCEEEESTTT
T ss_pred HHhCcccCCcCCCEEEECCCc
Confidence 998764 2468899999983
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=6.1e-18 Score=141.55 Aligned_cols=212 Identities=16% Similarity=0.131 Sum_probs=139.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc-------hhhhhccCCeEEEEecCCChHHHHHhhhcC--
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-- 71 (295)
|||+|+||.+++++|+++|++|++++|++............ ..+.....++.++.+|++|++++.+++++.
T Consensus 16 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (281)
T 3s55_A 16 TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAED 95 (281)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 79999999999999999999999999985432111111001 111223457899999999999998888753
Q ss_pred ---CCcEEEEcccC--------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCC
Q 022578 72 ---GFDVVYDINGR--------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (295)
Q Consensus 72 ---~~d~vi~~a~~--------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~ 122 (295)
++|++||+||. |..++.++++++ . +..++|++||...+....
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 166 (281)
T 3s55_A 96 TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF--------- 166 (281)
T ss_dssp HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT---------
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC---------
Confidence 79999999986 223455555553 2 667999999988753211
Q ss_pred CCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHH-HHHHHHcCCC----cccCCCCCceeeee
Q 022578 123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-FFHRLKAGRP----IPIPGSGIQVTQLG 190 (295)
Q Consensus 123 ~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~i 190 (295)
....|..+|+..+.+.+ ..|+++..++||.+++|......... +......... ..+.........+.
T Consensus 167 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (281)
T 3s55_A 167 -AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFL 245 (281)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCB
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCC
Confidence 11234599999887763 36899999999999998653211100 0000000000 00000111224678
Q ss_pred eHHHHHHHHHHHhcCCC--CCCceEEecCCcccC
Q 022578 191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
+++|+|++++.++.+.. ..|+.+++.+|..++
T Consensus 246 ~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 246 KPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred CHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 99999999999997643 358999999987554
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-19 Score=141.27 Aligned_cols=164 Identities=20% Similarity=0.121 Sum_probs=122.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-CCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~d~vi~~ 79 (295)
|||+|+||++++++|+++ +|++++|++...... .+.... +++.+|++|++++.+++++ .++|+|||+
T Consensus 6 tGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~---------~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 73 (207)
T 2yut_A 6 TGATGGLGGAFARALKGH--DLLLSGRRAGALAEL---------AREVGA-RALPADLADELEAKALLEEAGPLDLLVHA 73 (207)
T ss_dssp ETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHH---------HHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred EcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHH---------HHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999998 999999986552111 111122 7889999999999988873 279999999
Q ss_pred ccC--------------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cchhhHHHH
Q 022578 80 NGR--------------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTE 136 (295)
Q Consensus 80 a~~--------------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~~k~~~E 136 (295)
+|. |..++.++++++. +.++||++||...|... .+.. |..+|...|
T Consensus 74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~ 142 (207)
T 2yut_A 74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----------PGFAAYAAAKGALE 142 (207)
T ss_dssp CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------TTBHHHHHHHHHHH
T ss_pred CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCcchHHHHHHHHH
Confidence 985 2335677888887 66899999999887432 1233 449999998
Q ss_pred HHhhh-------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 022578 137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 207 (295)
Q Consensus 137 ~~~~~-------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 207 (295)
.+++. .+++++++|||.++++.. . +.+.....+++++|+|++++.++.++.
T Consensus 143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~-------------~-------~~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 143 AYLEAARKELLREGVHLVLVRLPAVATGLW-------------A-------PLGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCBCSGGG-------------G-------GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHHHhhhCCEEEEEecCcccCCCc-------------c-------ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 87642 589999999999998731 0 111233578999999999999998754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-18 Score=143.00 Aligned_cols=194 Identities=18% Similarity=0.206 Sum_probs=134.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecC-CCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++|+ +...... ..++.....++.++.+|++|++++.+++++. ++|
T Consensus 13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (258)
T 3afn_B 13 TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDET-----IASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID 87 (258)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHH-----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHH-----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999999998 4442111 0111222357899999999999998888743 799
Q ss_pred EEEEcccC-C--------------------hhcHHHHHHhC----C--C--C---CcEEEeeccccccCCCCCCCCCCCC
Q 022578 75 VVYDINGR-E--------------------ADEVEPILDAL----P--N--L---EQFIYCSSAGVYLKSDLLPHCETDT 122 (295)
Q Consensus 75 ~vi~~a~~-~--------------------~~~~~~ll~~~----~--~--~---~~~i~~Ss~~v~~~~~~~~~~e~~~ 122 (295)
+|||+||. . ..++.++++++ . + . .++|++||...+...
T Consensus 88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 157 (258)
T 3afn_B 88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG---------- 157 (258)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC----------
T ss_pred EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC----------
Confidence 99999985 1 11233333332 2 2 2 799999998765410
Q ss_pred CCCC-ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 123 VDPK-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 123 ~~p~-~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
..+. .|..+|...|.+.+ ..+++++++|||.++++..... ...+...+..+.+. ..+++++|
T Consensus 158 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~d 227 (258)
T 3afn_B 158 GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-TQDVRDRISNGIPM---------GRFGTAEE 227 (258)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-CHHHHHHHHTTCTT---------CSCBCGGG
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-CHHHHHHHhccCCC---------CcCCCHHH
Confidence 1122 34599999988763 2489999999999999854321 12233333333221 25688999
Q ss_pred HHHHHHHHhcCC---CCCCceEEecCCc
Q 022578 195 LARAFVQVLGNE---KASRQVFNISGEK 219 (295)
Q Consensus 195 ~a~~i~~~~~~~---~~~~~~~~i~~~~ 219 (295)
+|++++.++.++ ...|+.|++.++.
T Consensus 228 va~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 228 MAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp THHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred HHHHHHHHhCcchhccccCCEEeECCCc
Confidence 999999998753 2358899998875
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-18 Score=141.06 Aligned_cols=195 Identities=19% Similarity=0.188 Sum_probs=132.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++....... ..+. ...++.++.+|++|++++.++++.. .+|+
T Consensus 12 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (251)
T 1zk4_A 12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA-----KSVG-TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHhh-ccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865421110 0000 0147899999999999998888741 5999
Q ss_pred EEEcccCCh--------------------h----cHHHHHHhCC--CC-CcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGREA--------------------D----EVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~~--------------------~----~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||+||... . .++.+++.+. +. .+||++||...+.... ....|
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y 155 (251)
T 1zk4_A 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP----------SLGAY 155 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT----------TCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC----------CCccc
Confidence 999998621 1 1344555555 44 7999999988764321 11234
Q ss_pred chhhHHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|...|.+.+ ..+++++++|||.++++.......... .. .... ......+++++|+|+++
T Consensus 156 ~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~-~~~~-------~~~~~~~~~~~dva~~~ 226 (251)
T 1zk4_A 156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEE-AM-SQRT-------KTPMGHIGEPNDIAYIC 226 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHH-HH-TSTT-------TCTTSSCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhh-hH-HHhh-------cCCCCCCcCHHHHHHHH
Confidence 599999887753 458999999999999873211000000 00 0001 11112468999999999
Q ss_pred HHHhcCCC--CCCceEEecCCcc
Q 022578 200 VQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
+.++.++. ..|+.+++.++..
T Consensus 227 ~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 227 VYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHcCcccccccCcEEEECCCcc
Confidence 99987642 3588999988754
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=144.74 Aligned_cols=195 Identities=17% Similarity=0.147 Sum_probs=132.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecC-CCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++|. +...... ..++.....++.++.+|++|++++.+++++. ++|
T Consensus 27 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 101 (274)
T 1ja9_A 27 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV-----VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD 101 (274)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999999994 3321110 0111222356889999999999998888642 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----CCCCcEEEeeccccc-cCCCCCCCCCCCCCCCCccc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----PNLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~p~~~~ 129 (295)
+|||+||.. ..++.++++++ +...+||++||...+ .... ....|.
T Consensus 102 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------~~~~Y~ 171 (274)
T 1ja9_A 102 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP----------NHALYA 171 (274)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC----------SCHHHH
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC----------CCchHH
Confidence 999999852 22345554443 212699999998876 3211 112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-----------chH-HHHHHHHHcCCCcccCCCCCceeeee
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----------PVE-EWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
.+|+..|.+++ ..+++++++|||.++++.... ... .........+. ....++
T Consensus 172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 242 (274)
T 1ja9_A 172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN---------PLKRIG 242 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS---------TTSSCB
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC---------CCCCcc
Confidence 99999998764 248999999999998863110 000 11111111221 223578
Q ss_pred eHHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 022578 191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+++|+|++++.++.++. ..|+.|+++++.
T Consensus 243 ~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 243 YPADIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence 99999999999997643 368899998863
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=142.56 Aligned_cols=193 Identities=15% Similarity=0.207 Sum_probs=132.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCe-EEEEecCCChHHHHHhhhc----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSA----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~----~~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++++.... ..+...++ .++.+|++|.+++.++++. .++|+
T Consensus 17 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 17 TGAGSGIGLEICRAFAASGARLILIDREAAALDRA--------AQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 79999999999999999999999999986652211 01112345 8899999999999888753 37999
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC-Ccc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~ 128 (295)
|||+||.. ..++ +.+++.++ +.++||++||...+.... ..| ..|
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~~~~Y 159 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNR---------PQFASSY 159 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS---------SSCBHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCC---------CCcchHH
Confidence 99999862 2232 33333443 678999999988764321 112 234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|+..|.+.+ ..+++++++|||.++++...... ...+........+ ...+++++|+|++++
T Consensus 160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~ 230 (254)
T 2wsb_A 160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP---------MGRCGEPSEIAAAAL 230 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST---------TSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence 599999988763 24899999999999997321000 0112222222221 124688999999999
Q ss_pred HHhcCC--CCCCceEEecCCc
Q 022578 201 QVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~ 219 (295)
.++.++ ...|+.+++.++.
T Consensus 231 ~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 231 FLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp HHHSGGGTTCCSCEEEESTTG
T ss_pred HHhCcccccccCCEEEECCCE
Confidence 998653 2468899998874
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.1e-18 Score=139.59 Aligned_cols=195 Identities=15% Similarity=0.109 Sum_probs=131.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++| +.+..... ...+.....++.++.+|++|.+++.+++++. ++|
T Consensus 13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (261)
T 1gee_A 13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV-----LEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD 87 (261)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHH-----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999 54331110 0111222346889999999999988887643 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHh----CC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+|||+||.. ..++.+++++ +. + ..++|++||...+.. ..+..
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~ 156 (261)
T 1gee_A 88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----------WPLFV 156 (261)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------CTTCH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----------CCCcc
Confidence 999999852 1233444444 32 3 679999999876421 12233
Q ss_pred -cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 128 -RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 128 -~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
|..+|+..+.+.+ ..+++++++|||.++++...... .......+....+ ...+++++|+|++
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~ 227 (261)
T 1gee_A 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP---------MGYIGEPEEIAAV 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT---------TSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC---------CCCCcCHHHHHHH
Confidence 4499988877653 35899999999999998431100 0111122221111 1246889999999
Q ss_pred HHHHhcCC--CCCCceEEecCCcc
Q 022578 199 FVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
++.++.+. ...|+.+++.++..
T Consensus 228 ~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 228 AAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHhCccccCCCCcEEEEcCCcc
Confidence 99998753 24688999988864
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.8e-18 Score=140.46 Aligned_cols=190 Identities=12% Similarity=0.067 Sum_probs=130.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.++..+. +.+ .++.++.+|++|.+++.++++.. .+|+
T Consensus 33 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (260)
T 3gem_A 33 TGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE--------LRQ--AGAVALYGDFSCETGIMAFIDLLKTQTSSLRA 102 (260)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH--------HHH--HTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH--------HHh--cCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999987663111 111 25889999999999998888642 7999
Q ss_pred EEEcccCC-------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE-------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~-------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|..
T Consensus 103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~Y~a 172 (260)
T 3gem_A 103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS----------KHIAYCA 172 (260)
T ss_dssp EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS----------SCHHHHH
T ss_pred EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC----------CcHhHHH
Confidence 99999862 22344444443 2 557999999988753211 1123459
Q ss_pred hhHHHHHHhh----h--cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 131 GKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 131 ~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+|+..+.+.+ + .++++..++||.+..+.... ...........+. ..+..++|+|++++.++.
T Consensus 173 sKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p~---------~r~~~~edva~~v~~L~~ 240 (260)
T 3gem_A 173 TKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSAL---------GIEPGAEVIYQSLRYLLD 240 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS---------CCCCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhh
Confidence 9999887763 1 35999999999998764211 1111111111111 123568999999999997
Q ss_pred CCCCCCceEEecCCcccC
Q 022578 205 NEKASRQVFNISGEKYVT 222 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~~~t 222 (295)
.....|+.+++.++..++
T Consensus 241 ~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 241 STYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp CSSCCSCEEEESTTTTTC
T ss_pred CCCCCCCEEEECCCcccC
Confidence 666689999999987654
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-18 Score=140.78 Aligned_cols=199 Identities=15% Similarity=0.108 Sum_probs=138.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+.+...+. ..++.....++.++.+|++|.+++++++++. ++|+
T Consensus 18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 92 (256)
T 3gaf_A 18 TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAV-----AAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV 92 (256)
T ss_dssp CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 89999999999999999999999999987653211 1112233467899999999999988887653 8999
Q ss_pred EEEcccCC-------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE-------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~-------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|..
T Consensus 93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~a 162 (256)
T 3gaf_A 93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV----------RMASYGS 162 (256)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT----------TCHHHHH
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC----------CchHHHH
Confidence 99999862 22344555553 2 567999999988753211 1123459
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|+..+.+.+ ..++++..++||.+.++..................+. ..+.+++|+|++++.++
T Consensus 163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~L~ 233 (256)
T 3gaf_A 163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL---------GRLGEAQDIANAALFLC 233 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHc
Confidence 9999887763 3589999999999988632100011122222222221 24578999999999998
Q ss_pred cCC--CCCCceEEecCCcccCH
Q 022578 204 GNE--KASRQVFNISGEKYVTF 223 (295)
Q Consensus 204 ~~~--~~~~~~~~i~~~~~~t~ 223 (295)
... ...|+.+++.++...++
T Consensus 234 s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 234 SPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp SGGGTTCCSCEEEESTTSCCC-
T ss_pred CCcccCccCCEEEECCCccccC
Confidence 753 34689999999876654
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-18 Score=141.31 Aligned_cols=193 Identities=16% Similarity=0.143 Sum_probs=131.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++....... .....++.++.+|++|++++.+++++. ++|+
T Consensus 18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 18 TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV--------AGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999875522110 111136888999999999998888643 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||+||.. ..++.++++++. + ..++|++||...+.... ....|
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 159 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP----------LLAHY 159 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT----------TCHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC----------CchhH
Confidence 99999852 223334444432 3 68999999987653211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-----H-----HHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----E-----EWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
..+|+..+.+.+ ..|++++++|||.++++...... . ........... ....+++
T Consensus 160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~ 230 (263)
T 3ak4_A 160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT---------PLGRIEE 230 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC---------TTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC---------CCCCCcC
Confidence 599999887763 35899999999999887321000 0 01111111111 1124688
Q ss_pred HHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 192 VKDLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
++|+|++++.++.++ ...|+.|++.++..
T Consensus 231 ~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 231 PEDVADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence 999999999998764 24688999998754
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-17 Score=137.53 Aligned_cols=195 Identities=13% Similarity=0.143 Sum_probs=129.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+... +...++.++.+|++|.+++.+++++. ++|+
T Consensus 13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 13 TGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAA--------ELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999999876433221 11346899999999999998888653 8999
Q ss_pred EEEcccCC------------------------hhcHHHHHHhCC------------CCCcEEEeeccccccCCCCCCCCC
Q 022578 76 VYDINGRE------------------------ADEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHCE 119 (295)
Q Consensus 76 vi~~a~~~------------------------~~~~~~ll~~~~------------~~~~~i~~Ss~~v~~~~~~~~~~e 119 (295)
+||+||.. ..++.++++++. +..++|++||...+....
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~------ 158 (257)
T 3tpc_A 85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI------ 158 (257)
T ss_dssp EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT------
T ss_pred EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC------
Confidence 99999863 112334444432 235799999988764321
Q ss_pred CCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 022578 120 TDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 120 ~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (295)
....|..+|+..+.+.+ ..|+++..++||.+.++..... ........... .+. ...+.++
T Consensus 159 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~--~p~------~~r~~~~ 225 (257)
T 3tpc_A 159 ----GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM-PQDVQDALAAS--VPF------PPRLGRA 225 (257)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CC--SSS------SCSCBCH
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC-CHHHHHHHHhc--CCC------CCCCCCH
Confidence 11235599998887752 3689999999999998843211 11111111111 111 0246789
Q ss_pred HHHHHHHHHHhcCCCCCCceEEecCCcccC
Q 022578 193 KDLARAFVQVLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 193 ~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t 222 (295)
+|+|++++.++.+....|+.+++.++..++
T Consensus 226 ~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 226 EEYAALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred HHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence 999999999998766679999999986554
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.75 E-value=8.9e-18 Score=138.55 Aligned_cols=198 Identities=17% Similarity=0.214 Sum_probs=132.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++.. . ..++.....++.++.+|++|++++.+++++. ++|+
T Consensus 10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--~-----~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 10 TGSTSGIGLGIAQVLARAGANIVLNGFGDPAP--A-----LAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-----HHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH--H-----HHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986521 0 1111222346888999999999998888643 7999
Q ss_pred EEEcccCCh--------------------h----cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||... . .++.++..++ +..++|++||...+.... ....|.
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 152 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGST----------GKAAYV 152 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT----------TBHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCC----------CchhHH
Confidence 999998521 1 1334444444 568999999988753211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHH-HHHcCC-C----cccCCCCCceeeeeeHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGR-P----IPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~-~~~~~~-~----~~~~~~~~~~~~~i~~~D~a 196 (295)
.+|...+.+.+ ..++++++++||.++++... .+.. ....+. . ..+.........+++++|+|
T Consensus 153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA 227 (255)
T 2q2v_A 153 AAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ-----KQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLG 227 (255)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH-----HHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh-----hhcccccccccchHHHHHHHHhccCCCCCCcCHHHHH
Confidence 89999887763 35899999999999987321 1110 000000 0 00001111223578999999
Q ss_pred HHHHHHhcCCC--CCCceEEecCCcc
Q 022578 197 RAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 197 ~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
++++.++..+. ..|+.|++.++..
T Consensus 228 ~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 228 ELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhCCccCCCCCCEEEECCCcc
Confidence 99999987543 3588999988754
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=5.3e-18 Score=139.97 Aligned_cols=197 Identities=12% Similarity=0.064 Sum_probs=131.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++. .... .. ... .++.+|++|++++.+++++. ++|+
T Consensus 12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~--------~~-~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 80 (256)
T 2d1y_A 12 TGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVA--------EA-IGG-AFFQVDLEDERERVRFVEEAAYALGRVDV 80 (256)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHH--------HH-HTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHH--------HH-hhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998765 2111 11 124 78999999999888887642 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ + +..++|++||...+.... ....|.
T Consensus 81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 150 (256)
T 2d1y_A 81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ----------ENAAYN 150 (256)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT----------TBHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC----------CChhHH
Confidence 99999862 22344444443 2 567999999987643211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHH-cCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|+..+.+.+ ..+++++.++||.+.++. ...++.... ................+++++|+|++++.
T Consensus 151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~ 225 (256)
T 2d1y_A 151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-----VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLF 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-----hhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999887763 358999999999988762 111100000 11110000111122357899999999999
Q ss_pred HhcCC--CCCCceEEecCCcccCH
Q 022578 202 VLGNE--KASRQVFNISGEKYVTF 223 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~~t~ 223 (295)
++.++ ...|+.+++.++..+++
T Consensus 226 l~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 226 LASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp HHSGGGTTCCSCEEEESTTGGGBC
T ss_pred HhCchhcCCCCCEEEECCCccccc
Confidence 98764 24688999999876554
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-17 Score=138.97 Aligned_cols=196 Identities=17% Similarity=0.189 Sum_probs=137.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-CCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||.+++++|+++|++|++++|+........ .++.+.. .++.++.+|++|++++.+++++. .+|
T Consensus 47 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 121 (293)
T 3rih_A 47 TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVT-----AELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD 121 (293)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999876632111 1111112 47899999999999988877653 789
Q ss_pred EEEEcccC--------------------ChhcHHHHHHhC----C--CCCcEEEeeccccc-cCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGR--------------------EADEVEPILDAL----P--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~--------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~p~~ 127 (295)
++||+||. |..++.++++++ . +..++|++||...+ ... .....
T Consensus 122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~----------~~~~~ 191 (293)
T 3rih_A 122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGY----------PGWSH 191 (293)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBC----------TTCHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCC----------CCCHH
Confidence 99999986 233566677776 2 67899999997642 111 11123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|+..+.+.+ ..|+++..++||.++++.... ....+........+.. .+..++|+|++++
T Consensus 192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~---------r~~~p~dvA~~v~ 261 (293)
T 3rih_A 192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD-MGEEYISGMARSIPMG---------MLGSPVDIGHLAA 261 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-TCHHHHHHHHTTSTTS---------SCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-ccHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence 4599999887763 368999999999999974211 1122233333333221 2356899999999
Q ss_pred HHhcCC--CCCCceEEecCCccc
Q 022578 201 QVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
.++... ...|+.+++.++..+
T Consensus 262 fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 262 FLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp HHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHhCccccCCCCCEEEECCCccC
Confidence 998753 346899999998654
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.9e-17 Score=134.29 Aligned_cols=193 Identities=13% Similarity=0.079 Sum_probs=123.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++.. . .++.++.+|++|++++.+++++. ++|+
T Consensus 13 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--~-------------~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~ 77 (250)
T 2fwm_X 13 TGAGKGIGYATALAFVEAGAKVTGFDQAFTQE--Q-------------YPFATEVMDVADAAQVAQVCQRLLAETERLDA 77 (250)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS--C-------------CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh--c-------------CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986531 0 23788999999999998888642 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ + +..++|++||...+... .....|.
T Consensus 78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~Y~ 147 (250)
T 2fwm_X 78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR----------IGMSAYG 147 (250)
T ss_dssp EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------TTCHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC----------CCCchHH
Confidence 99999862 22344455554 3 67899999998875321 1112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHH-HHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|...+.+.+ ..++++++++||.++++...... ...... ...... ...........+.+++|+|++++
T Consensus 148 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~p~dvA~~v~ 225 (250)
T 2fwm_X 148 ASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFG--EQFKLGIPLGKIARPQEIANTIL 225 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhh--hcccccCCCCCCcCHHHHHHHHH
Confidence 99999988763 35899999999999988532110 000000 000000 00000011124688999999999
Q ss_pred HHhcCC--CCCCceEEecCCcc
Q 022578 201 QVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~~ 220 (295)
.++.++ ...|+.+++.++..
T Consensus 226 ~l~s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 226 FLASDLASHITLQDIVVDGGST 247 (250)
T ss_dssp HHHSGGGTTCCSCEEEESTTTT
T ss_pred HHhCccccCCCCCEEEECCCcc
Confidence 998763 34688999988754
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=138.09 Aligned_cols=195 Identities=15% Similarity=0.175 Sum_probs=131.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++....+. ..+...++.++.+|++|++++.++++.. .+|+
T Consensus 12 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL--------AAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986552211 0111246889999999999988887642 6899
Q ss_pred EEEcccCCh--------------------h----cHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~----~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||... . .++.++..++ + .++|++||...+.... ....|.
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----------~~~~Y~ 152 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE----------QYAGYS 152 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT----------TBHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCC----------CCccHH
Confidence 999998621 1 2344555554 5 8999999988763211 112345
Q ss_pred hhhHHHHHHhhh-------c--CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 130 KGKLNTESVLES-------K--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 130 ~~k~~~E~~~~~-------~--~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|...+.+.+. . +++++++|||.++++.................... ......+.+++|+|++++
T Consensus 153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-----~~p~~~~~~~~dvA~~~~ 227 (253)
T 1hxh_A 153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK-----LNRAGRAYMPERIAQLVL 227 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTT-----TBTTCCEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhc-----cCccCCCCCHHHHHHHHH
Confidence 999998887642 3 89999999999998731000000000000000000 011134689999999999
Q ss_pred HHhcCCC--CCCceEEecCCc
Q 022578 201 QVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~~ 219 (295)
.++.++. ..|+.+++.++.
T Consensus 228 ~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 228 FLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp HHHSGGGTTCCSCEEEESSSC
T ss_pred HHcCccccCCCCcEEEECCCc
Confidence 9987642 458899998874
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=7.4e-18 Score=138.28 Aligned_cols=191 Identities=14% Similarity=0.118 Sum_probs=131.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|+||++++++|+++|++|++++|++.+.... . ...++.++.+|++|+++++++++.. ++|++||+
T Consensus 12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ 81 (246)
T 2ag5_A 12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQEL---------E-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV 81 (246)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG---------G-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------H-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence 79999999999999999999999999987653211 1 1136889999999999998776543 79999999
Q ss_pred ccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhH
Q 022578 80 NGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL 133 (295)
Q Consensus 80 a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~ 133 (295)
||.. ..++.++++++ . +..++|++||...+.... .....|..+|+
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~Y~~sK~ 152 (246)
T 2ag5_A 82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV---------VNRCVYSTTKA 152 (246)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC---------TTBHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC---------CCCccHHHHHH
Confidence 9862 22333444443 2 667999999987653211 01123459999
Q ss_pred HHHHHhh-------hcCCcEEEeccCeeecCCCCCch-----HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 134 ~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+.+.+ ..+++++++|||.++++...... ............+ ...+.+++|+|++++.
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~v~~ 223 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCVY 223 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC---------CCCCCCHHHHHHHHHH
Confidence 9988764 34899999999999997321000 0111111211111 1136889999999999
Q ss_pred HhcCCC--CCCceEEecCCc
Q 022578 202 VLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~~ 219 (295)
++..+. ..|+.+++.++.
T Consensus 224 l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 224 LASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp HHSGGGTTCCSCEEEECTTG
T ss_pred HhCccccCCCCCEEEECCCc
Confidence 987532 468899998874
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=137.25 Aligned_cols=193 Identities=16% Similarity=0.193 Sum_probs=125.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|+++ .|++...... ...+.....++.++.+|++|++++++++++. ++|
T Consensus 11 tGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 85 (247)
T 2hq1_A 11 TGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDAT-----AEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID 85 (247)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHH-----HHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHH-----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 7999999999999999999999999 4554432110 0111222356899999999999998888643 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeecccc-ccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~p~~ 127 (295)
+|||+||.. ..++.+++++ +. +..+||++||... |+.. ....
T Consensus 86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~ 154 (247)
T 2hq1_A 86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA-----------GQAN 154 (247)
T ss_dssp EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------CHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC-----------CCcH
Confidence 999999862 2233344444 32 6679999999743 3221 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|...|.+.+ ..++++++++||.+.++.... ...........+.+ ...+++++|+|++++
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~ 224 (247)
T 2hq1_A 155 YAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKEMYLNNIP---------LKRFGTPEEVANVVG 224 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTST---------TSSCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cchHHHHHHHhhCC---------CCCCCCHHHHHHHHH
Confidence 5599999888763 348999999999988762111 11112222222221 124688999999999
Q ss_pred HHhcCC--CCCCceEEecCCc
Q 022578 201 QVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~ 219 (295)
.++..+ ...|+.|++.++.
T Consensus 225 ~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 225 FLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp HHHSGGGTTCCSCEEEESTTC
T ss_pred HHcCcccccccCcEEEeCCCc
Confidence 988753 2357899998874
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.2e-18 Score=141.98 Aligned_cols=201 Identities=15% Similarity=0.219 Sum_probs=135.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||+|+||++++++|+++|++|++++|+..+..... .++ .....++.++.+|++|.+++++++++ ..+|
T Consensus 20 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 94 (265)
T 1h5q_A 20 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT-----EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS 94 (265)
T ss_dssp ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH-----HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHH-----HHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999999999999765422110 011 11235789999999999999888764 2599
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+|||+||.. ..++.++++++. + ..+||++||...+..... ...+..+..
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~ 170 (265)
T 1h5q_A 95 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSLTQV 170 (265)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEECSCH
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccccccccc
Confidence 999999862 223445555542 2 478999999876533211 011122333
Q ss_pred -cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 -RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 -~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|+..|.+.+ ..+++++++|||.++++..... ............+. ..+++++|+|+++
T Consensus 171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~dva~~~ 240 (265)
T 1h5q_A 171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-DKKIRDHQASNIPL---------NRFAQPEEMTGQA 240 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHHHTCTT---------SSCBCGGGGHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc-chhHHHHHHhcCcc---------cCCCCHHHHHHHH
Confidence 4499999988763 3589999999999998853221 11222222222211 2357899999999
Q ss_pred HHHhcCCC--CCCceEEecCCcc
Q 022578 200 VQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
+.++.++. ..|+.|++.++..
T Consensus 241 ~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 241 ILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp HHHHSGGGTTCCSCEEEECTTGG
T ss_pred HhhccCchhcCcCcEEEecCCEe
Confidence 99987632 4688999998854
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-17 Score=138.12 Aligned_cols=194 Identities=18% Similarity=0.180 Sum_probs=135.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|......... ...+.....++.++.+|++|.+++++++++. .+|+
T Consensus 34 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~ 109 (269)
T 4dmm_A 34 TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEV----VAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV 109 (269)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999998654321111 1112223357899999999999998888753 8999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|.
T Consensus 110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 179 (269)
T 4dmm_A 110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP----------GQANYS 179 (269)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT----------TCHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC----------CchhHH
Confidence 99999872 22344455543 2 667999999987653221 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|+++..++||.+.++..... .........+. ..+.+++|+|++++.+
T Consensus 180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~~~~p~---------~r~~~~~dvA~~v~~l 246 (269)
T 4dmm_A 180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL----AAEKLLEVIPL---------GRYGEAAEVAGVVRFL 246 (269)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH----HHHHHGGGCTT---------SSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc----cHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence 99998887653 4689999999999998754221 11222222221 2356799999999999
Q ss_pred hcCCC---CCCceEEecCCccc
Q 022578 203 LGNEK---ASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~~---~~~~~~~i~~~~~~ 221 (295)
+.++. ..|+.+++.+|..+
T Consensus 247 ~s~~~~~~itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 247 AADPAAAYITGQVINIDGGLVM 268 (269)
T ss_dssp HHCGGGGGCCSCEEEESTTSCC
T ss_pred hCCcccCCCcCCEEEECCCeec
Confidence 98732 35889999988654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.74 E-value=5e-18 Score=139.06 Aligned_cols=194 Identities=17% Similarity=0.185 Sum_probs=130.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|+++ .|++...... ...+.....++.++.+|++|++++.++++.. ++|
T Consensus 7 TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEV-----SKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-----HHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999995 6765442111 0112222356889999999999998888742 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+|||+||.. ..++.++++++. +..+||++||...+.... ....|
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y 151 (244)
T 1edo_A 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI----------GQANY 151 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCHHH
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC----------CCccc
Confidence 999999852 223444454432 567999999986643211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+.+ ..+++++++|||.++++.... ....+........+ ...+++++|+|++++.
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~ 221 (244)
T 1edo_A 152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIP---------LGRTGQPENVAGLVEF 221 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCT---------TCSCBCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhcCC---------CCCCCCHHHHHHHHHH
Confidence 589998877653 358999999999999873211 11112222222111 1246789999999999
Q ss_pred HhcCCC---CCCceEEecCCc
Q 022578 202 VLGNEK---ASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~~---~~~~~~~i~~~~ 219 (295)
++..+. ..|+.|++.++.
T Consensus 222 l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 222 LALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHCSGGGGCCSCEEEESTTT
T ss_pred HhCCCccCCcCCCEEEeCCCc
Confidence 984432 358899998874
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.2e-18 Score=143.19 Aligned_cols=198 Identities=19% Similarity=0.219 Sum_probs=135.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ ...+.....++.++.+|++|++++.+++++. .+|+
T Consensus 53 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 128 (291)
T 3ijr_A 53 TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANET----KQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI 128 (291)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876421111 0111222357899999999999988887653 7999
Q ss_pred EEEcccCC---------------------hhcHHHHHHhC----CCCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE---------------------ADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+||.. ..++.++++++ +...++|++||...+..... ...|..
T Consensus 129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~a 198 (291)
T 3ijr_A 129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET----------LIDYSA 198 (291)
T ss_dssp EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT----------CHHHHH
T ss_pred EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC----------ChhHHH
Confidence 99998852 22344555553 34469999999887643211 123559
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|+..+.+.+ ..|+++..++||.++++.............. ........+.+++|+|++++.++
T Consensus 199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L~ 269 (291)
T 3ijr_A 199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF---------GSNVPMQRPGQPYELAPAYVYLA 269 (291)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHT---------TTTSTTSSCBCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHH---------HccCCCCCCcCHHHHHHHHHHHh
Confidence 9999887763 3589999999999998731100001111111 11222234678999999999998
Q ss_pred cCC--CCCCceEEecCCccc
Q 022578 204 GNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 204 ~~~--~~~~~~~~i~~~~~~ 221 (295)
... ...|+.+++.+|..+
T Consensus 270 s~~~~~itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 270 SSDSSYVTGQMIHVNGGVIV 289 (291)
T ss_dssp SGGGTTCCSCEEEESSSCCC
T ss_pred CCccCCCcCCEEEECCCccc
Confidence 753 346889999888543
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=136.97 Aligned_cols=196 Identities=17% Similarity=0.179 Sum_probs=135.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-CCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||.+++++|+++|++|++++|+.+...+.. .++.+.. .++.++.+|++|+++++++++.. ++|
T Consensus 16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (262)
T 3pk0_A 16 TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACV-----ADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID 90 (262)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999876632111 1111112 47899999999999998887643 899
Q ss_pred EEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccc-cCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~p~~ 127 (295)
++||+||.. ..++.+++++ +. +..++|++||...+ .. ......
T Consensus 91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~~ 160 (262)
T 3pk0_A 91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG----------YPGWSH 160 (262)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC----------CTTCHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------CCCChh
Confidence 999999862 2234444444 33 66899999997642 11 011123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|...+.+.+ ..|+++..++||.++++..... ...+........+. ..+.+++|+|++++
T Consensus 161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~---------~r~~~p~dva~~v~ 230 (262)
T 3pk0_A 161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN-GEEYIASMARSIPA---------GALGTPEDIGHLAA 230 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT-CHHHHHHHHTTSTT---------SSCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc-CHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence 4599999988763 3689999999999998742111 12223333332221 13467999999999
Q ss_pred HHhcCC--CCCCceEEecCCccc
Q 022578 201 QVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
.++... ...|+.+++.++..+
T Consensus 231 ~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 231 FLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp HHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHhCccccCCcCCEEEECCCeec
Confidence 998754 246889999998654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7e-18 Score=139.54 Aligned_cols=188 Identities=16% Similarity=0.166 Sum_probs=132.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++++..... .....++.++.+|++|++++.++++.. ++|+
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA--------AELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999875522110 111134888999999999998888642 7999
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++ +.++..++ +..++|++||...+.... ....|.
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 154 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----------ACHGYT 154 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC----------CchhHH
Confidence 99999852 1223 34445454 678999999988764211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..|++++++|||.++++... . ....+. ......+.+++|+|++++.+
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~---------~~~~~~----~~~~~~~~~~~dvA~~v~~l 219 (260)
T 1nff_A 155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--W---------VPEDIF----QTALGRAAEPVEVSNLVVYL 219 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--T---------SCTTCS----CCSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--c---------chhhHH----hCccCCCCCHHHHHHHHHHH
Confidence 99999888763 36899999999999998421 0 001110 01112468899999999999
Q ss_pred hcCCC--CCCceEEecCCccc
Q 022578 203 LGNEK--ASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~~~ 221 (295)
+.... ..|+.|++.++...
T Consensus 220 ~s~~~~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 220 ASDESSYSTGAEFVVDGGTVA 240 (260)
T ss_dssp HSGGGTTCCSCEEEESTTGGG
T ss_pred hCccccCCcCCEEEECCCeec
Confidence 87532 35889999988543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=135.58 Aligned_cols=192 Identities=15% Similarity=0.126 Sum_probs=131.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|+||+++++.|+++|++|++++|+.+..... ......++.++.+|+++.+++.+++++. ++|++||+
T Consensus 20 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 91 (249)
T 3f9i_A 20 TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL--------GNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN 91 (249)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 79999999999999999999999999987653211 1222357899999999999999998865 69999999
Q ss_pred ccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhH
Q 022578 80 NGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL 133 (295)
Q Consensus 80 a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~ 133 (295)
||.. ..++.++++++ . +..++|++||...+.... ....|..+|+
T Consensus 92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~~sK~ 161 (249)
T 3f9i_A 92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP----------GQANYCASKA 161 (249)
T ss_dssp CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS----------CSHHHHHHHH
T ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC----------CCchhHHHHH
Confidence 9862 22344454443 2 567999999987753321 1123459999
Q ss_pred HHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 134 ~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
..+.+.+ ..++++..++||.+.++..... ..........+.+ ...+.+++|+|++++.++.++
T Consensus 162 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~ 231 (249)
T 3f9i_A 162 GLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL-NEKQREAIVQKIP---------LGTYGIPEDVAYAVAFLASNN 231 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBC------C-CHHHHHHHHHHCT---------TCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc-CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCCc
Confidence 8887753 3689999999999998753221 1122222222221 134677999999999999764
Q ss_pred C--CCCceEEecCCcc
Q 022578 207 K--ASRQVFNISGEKY 220 (295)
Q Consensus 207 ~--~~~~~~~i~~~~~ 220 (295)
. ..|+.+++.++..
T Consensus 232 ~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 232 ASYITGQTLHVNGGML 247 (249)
T ss_dssp GTTCCSCEEEESTTSS
T ss_pred cCCccCcEEEECCCEe
Confidence 3 3688999988754
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.4e-17 Score=137.30 Aligned_cols=196 Identities=12% Similarity=0.095 Sum_probs=131.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc------CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d 74 (295)
|||+|+||++++++|+++|++|++++|+++..... ..++.....++.++.+|++|++++.++++. ..+|
T Consensus 27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 101 (273)
T 1ae1_A 27 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC-----LEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 101 (273)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 79999999999999999999999999987552211 011122235788999999999998888743 3799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..++.++++++ + +..++|++||...+.... ....|
T Consensus 102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~Y 171 (273)
T 1ae1_A 102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP----------SVSLY 171 (273)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT----------TCHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC----------Ccchh
Confidence 999999862 22344455543 2 567999999988764321 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchH-----HHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
..+|...+.+.+ ..|+++++++||.++++....... ...........+. ..+.+++|+|
T Consensus 172 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dvA 242 (273)
T 1ae1_A 172 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEVS 242 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence 599999887763 358999999999999985321100 1111122111111 1357899999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCcc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
++++.++... ...|+.+++.++..
T Consensus 243 ~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 243 ALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhCccccCcCCCEEEECCCcc
Confidence 9999998753 23688999988854
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-17 Score=140.54 Aligned_cols=219 Identities=16% Similarity=0.131 Sum_probs=140.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc-------hhhhhccCCeEEEEecCCChHHHHHhhhcC--
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-- 71 (295)
|||+|+||.+++++|+++|++|++++|+............. ..+.....++.++.+|++|.+++.+++++.
T Consensus 16 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 95 (287)
T 3pxx_A 16 TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVA 95 (287)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred eCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 79999999999999999999999999985432211111001 112223457899999999999998887653
Q ss_pred ---CCcEEEEcccCC------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 72 ---GFDVVYDINGRE------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 72 ---~~d~vi~~a~~~------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
++|++||+||.. ..++.++++++. +..++|++||...+......+..+..+..+.
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~ 175 (287)
T 3pxx_A 96 EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGG 175 (287)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHH
T ss_pred HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCcc
Confidence 799999999862 224555555543 4569999999887654332233333222222
Q ss_pred c-cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcC---CC-----cccCCCCCceeeee
Q 022578 127 S-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP-----IPIPGSGIQVTQLG 190 (295)
Q Consensus 127 ~-~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~i 190 (295)
. |..+|...+.+.+ ..|+++..++||.+.++........ ...... .. ............+.
T Consensus 176 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (287)
T 3pxx_A 176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMY---RQFRPDLEAPSRADALLAFPAMQAMPTPYV 252 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHH---HHHCTTSSSCCHHHHHHHGGGGCSSSCSCB
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchh---hhhccccccchhHHHHhhhhhhcccCCCCC
Confidence 2 4489999887763 3589999999999999854321110 111000 00 00000111124678
Q ss_pred eHHHHHHHHHHHhcCC--CCCCceEEecCCcccC
Q 022578 191 HVKDLARAFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
+++|+|++++.++.+. ...|+.+++.+|..++
T Consensus 253 ~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 253 EASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred CHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 9999999999998653 3468999999986543
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.5e-18 Score=139.41 Aligned_cols=194 Identities=12% Similarity=0.191 Sum_probs=130.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhccCCeEE-EEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILH-LKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+|+||.+++++|+++|++|+++ +|+++..... ...+.....++.. +.+|++|.+++.+++++ .++
T Consensus 7 TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 2ph3_A 7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEV-----AEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL 81 (245)
T ss_dssp TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHH-----HHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-----HHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999998 6765542111 0111112245666 89999999998888653 279
Q ss_pred cEEEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|+|||+||.. ..+ ++.+++.++ +.++||++||...+.... ....
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~ 151 (245)
T 2ph3_A 82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP----------GQAN 151 (245)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS----------SBHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC----------CCcc
Confidence 9999999852 123 444555554 678999999976543211 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|...+.+.+ ..+++++++|||.++++.... ....+........+ ...+++++|+|++++
T Consensus 152 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~ 221 (245)
T 2ph3_A 152 YVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIP---------AGRFGRPEEVAEAVA 221 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence 4589998887653 348999999999999874211 11122222222221 124679999999999
Q ss_pred HHhcCCC--CCCceEEecCCc
Q 022578 201 QVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~~ 219 (295)
.++.++. ..|+.|++.++.
T Consensus 222 ~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 222 FLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp HHTSGGGTTCCSCEEEESTTC
T ss_pred HHhCcccccccCCEEEECCCC
Confidence 9987632 358899998874
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=137.98 Aligned_cols=199 Identities=14% Similarity=0.189 Sum_probs=136.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ ...+.....++.++.+|++|++++.+++++. ++|+
T Consensus 13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 88 (264)
T 3i4f_A 13 TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETM----KETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF 88 (264)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999988765522111 0111222357899999999999999888754 8999
Q ss_pred EEEcccC----------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCC-
Q 022578 76 VYDINGR----------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK- 126 (295)
Q Consensus 76 vi~~a~~----------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~- 126 (295)
+||+||. |..++.++++++ + +..++|++||.+.++... ..+.
T Consensus 89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------~~~~~ 159 (264)
T 3i4f_A 89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG---------WIYRS 159 (264)
T ss_dssp EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC---------CTTCH
T ss_pred EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC---------CCCCc
Confidence 9999992 223455555554 3 667999999885542211 1122
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.|..+|+..+.+.+ ..++++..++||.++++..... ........... .....+.+++|+|+++
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~---------~p~~r~~~~~dva~~v 229 (264)
T 3i4f_A 160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHN---------TPIGRSGTGEDIARTI 229 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC-----------------CCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhc---------CCCCCCcCHHHHHHHH
Confidence 34599999887763 3689999999999999854322 12111111111 1122457899999999
Q ss_pred HHHhcCCC--CCCceEEecCCcccC
Q 022578 200 VQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
+.++.+.. ..|+.+++.+|....
T Consensus 230 ~~l~s~~~~~itG~~i~vdGG~~~~ 254 (264)
T 3i4f_A 230 SFLCEDDSDMITGTIIEVTGAVDVI 254 (264)
T ss_dssp HHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred HHHcCcccCCCCCcEEEEcCceeec
Confidence 99997643 468999999986543
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.7e-17 Score=134.15 Aligned_cols=196 Identities=15% Similarity=0.151 Sum_probs=137.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+.....+. ...+.+...++.++.+|++|++++++++++. .+|+
T Consensus 11 TGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (247)
T 3lyl_A 11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKF-----ENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI 85 (247)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1112222357899999999999998888753 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|.
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 155 (247)
T 3lyl_A 86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP----------GQTNYC 155 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCHHHH
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC----------CcHHHH
Confidence 99999862 22344444443 2 556999999987653321 122345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..++++..++||.+.++..... ............ ....+.+++|+|++++.+
T Consensus 156 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~dva~~i~~l 225 (247)
T 3lyl_A 156 AAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL-TDEQKSFIATKI---------PSGQIGEPKDIAAAVAFL 225 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS-CHHHHHHHHTTS---------TTCCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc-cHHHHHHHhhcC---------CCCCCcCHHHHHHHHHHH
Confidence 99998877653 4689999999999998754321 122222222221 123467899999999999
Q ss_pred hcCCC--CCCceEEecCCccc
Q 022578 203 LGNEK--ASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~~~ 221 (295)
+.+.. ..|+.+++.++..+
T Consensus 226 ~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 226 ASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp HSGGGTTCCSCEEEESTTSSC
T ss_pred hCCCcCCccCCEEEECCCEec
Confidence 87532 46899999988654
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-18 Score=141.95 Aligned_cols=198 Identities=14% Similarity=0.120 Sum_probs=134.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc------CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d 74 (295)
|||+|+||++++++|+++|++|++++|+++...... .++.....++.++.+|++|++++.++++. .++|
T Consensus 15 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 89 (260)
T 2ae2_A 15 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 89 (260)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 799999999999999999999999999876522110 11122234688999999999998888753 3799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..++.++++++ . +..++|++||...+.... ....|
T Consensus 90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 159 (260)
T 2ae2_A 90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP----------YEAVY 159 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT----------TCHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC----------CcchH
Confidence 999999852 22344555554 2 567999999987653211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCC----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..+|...+.+.+ ..++++++++||.+.++... .......+....... ....+++++|+|+
T Consensus 160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~ 230 (260)
T 2ae2_A 160 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---------ALRRMGEPKELAA 230 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---------TTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---------CCCCCCCHHHHHH
Confidence 599999988764 34899999999999876210 000000000111111 1124688999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCcccC
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
+++.++..+ ...|+.+++.++..++
T Consensus 231 ~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 231 MVAFLCFPAASYVTGQIIYVDGGLMAN 257 (260)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHcCccccCCCCCEEEECCCcccc
Confidence 999998753 2368899999886543
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.3e-18 Score=139.50 Aligned_cols=197 Identities=13% Similarity=0.132 Sum_probs=134.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++..... ..++.....++.++.+|++|.+++..+++.. ++|+
T Consensus 20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 94 (260)
T 2zat_A 20 TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRT-----VATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI 94 (260)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987552211 0111222346889999999999888877642 7999
Q ss_pred EEEcccCC---------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCC-c
Q 022578 76 VYDINGRE---------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S 127 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~ 127 (295)
+||+||.. ..++.+++++ ++ +..++|++||...|... .+. .
T Consensus 95 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 163 (260)
T 2zat_A 95 LVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF-----------PNLGP 163 (260)
T ss_dssp EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC-----------CCchh
Confidence 99999852 1233334444 32 56799999998876421 122 3
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|...+.+.+ ..++++++++||.+.++...... ........... . ....+.+++|+|+++
T Consensus 164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~v 234 (260)
T 2zat_A 164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES--L-------RIRRLGNPEDCAGIV 234 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH--H-------TCSSCBCGGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc--C-------CCCCCCCHHHHHHHH
Confidence 4489999888764 34899999999999987421100 00000111111 1 112467899999999
Q ss_pred HHHhcCCC--CCCceEEecCCcccC
Q 022578 200 VQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
+.++.++. ..|+.+++.++...+
T Consensus 235 ~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 235 SFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp HHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred HHHcCcccCCccCCEEEECCCcccc
Confidence 99987643 368899999987665
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=139.44 Aligned_cols=205 Identities=18% Similarity=0.205 Sum_probs=132.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||.+++++|+++|++|++++|+........ ..++... ..++.++.+|++|.+++.+++++. ++|
T Consensus 31 TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 106 (281)
T 3v2h_A 31 TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTV----TDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD 106 (281)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHH----HHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence 799999999999999999999999999543311110 0011111 357889999999999998888653 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..++.++++++ . +..++|++||...+.... ....|
T Consensus 107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 176 (281)
T 3v2h_A 107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASP----------FKSAY 176 (281)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TCHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCC----------CchHH
Confidence 999999862 23445555553 3 667999999987653211 11235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHH-HHHHcCCC-cccCCCCCceeeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-HRLKAGRP-IPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|+..+.+.+ ..|+++..++||.+.++........... ........ ......+.....+++++|+|+++
T Consensus 177 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v 256 (281)
T 3v2h_A 177 VAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLA 256 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence 599999887763 3589999999999999853211100000 00000000 01112333445689999999999
Q ss_pred HHHhcCCC--CCCceEEecCCc
Q 022578 200 VQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+.++.+.. ..|+.+++.+|.
T Consensus 257 ~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 257 LYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp HHHHSSGGGGCCSCEEEESTTG
T ss_pred HHHcCCCcCCCCCcEEEECCCc
Confidence 99987643 468899998874
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=1e-17 Score=142.73 Aligned_cols=227 Identities=15% Similarity=0.081 Sum_probs=136.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.....................++.++.+|++|++++.+++++. ++|+
T Consensus 11 TGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~ 90 (324)
T 3u9l_A 11 TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDV 90 (324)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999975331110000000111222357899999999999998888754 8999
Q ss_pred EEEcccC--------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGR--------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||. |..++.++++++ + +..++|++||...+.... .....|.
T Consensus 91 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~---------~~~~~Y~ 161 (324)
T 3u9l_A 91 LIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP---------PYLAPYF 161 (324)
T ss_dssp EEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC---------SSCHHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC---------CcchhHH
Confidence 9999995 334566666665 3 678999999988653211 1112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCC---C--chHHHHHHHHHcCCCcccCCCC-----CceeeeeeH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---N--PVEEWFFHRLKAGRPIPIPGSG-----IQVTQLGHV 192 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~---~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~ 192 (295)
.+|...|.+.+ ..|+++++++||.+.++... . ..................+..- ....+..++
T Consensus 162 asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p 241 (324)
T 3u9l_A 162 AAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADV 241 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCT
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCH
Confidence 99999988763 35899999999999865321 0 0001111111111000000000 000112578
Q ss_pred HHHHHHHHHHhcCCCCC-CceEEecCCcccC-------HHHHHHHHHHHhCCC
Q 022578 193 KDLARAFVQVLGNEKAS-RQVFNISGEKYVT-------FDGLARACAKVTGLL 237 (295)
Q Consensus 193 ~D~a~~i~~~~~~~~~~-~~~~~i~~~~~~t-------~~e~~~~i~~~~g~~ 237 (295)
+|+|++++.++..+... ...+.+ ++.... .+++.+.+.+.+|.+
T Consensus 242 ~~vA~aiv~~~~~~~~~~~~~~~~-gp~~~~~~~~~~~~~~~~~~~~~~~g~~ 293 (324)
T 3u9l_A 242 SLVADAIVRVVGTASGKRPFRVHV-DPAEDGADVGFSVLDRLRAEMLHRVGLS 293 (324)
T ss_dssp HHHHHHHHHHHTSCTTCCCSEEEE-CTTCCSHHHHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHhcCCCCCCCeEEEe-CCcchHHHHHHHHHHHHHHHHHHHcChH
Confidence 99999999999876432 334444 443345 344444555555655
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.3e-17 Score=135.81 Aligned_cols=196 Identities=17% Similarity=0.193 Sum_probs=136.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+. ..++.+...++.++.+|++|++++.+++++. .+|+
T Consensus 17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 91 (264)
T 3ucx_A 17 SGVGPALGTTLARRCAEQGADLVLAARTVERLEDV-----AKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV 91 (264)
T ss_dssp ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 79999999999999999999999999987653211 1112223457899999999999998888653 7999
Q ss_pred EEEcccCC---------------------hhcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE---------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++. +..++|++||...+.... ....|.
T Consensus 92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 161 (264)
T 3ucx_A 92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA----------KYGAYK 161 (264)
T ss_dssp EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT----------TCHHHH
T ss_pred EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC----------ccHHHH
Confidence 99999752 224555666543 337999999988653211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch----------HHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (295)
.+|+..+.+.+ ..|+++..++||.++++...... ...+......+. ....+.++
T Consensus 162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p 232 (264)
T 3ucx_A 162 MAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS---------DLKRLPTE 232 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS---------SSSSCCBH
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC---------CcccCCCH
Confidence 99999887763 36899999999999987321000 011112222221 22346789
Q ss_pred HHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 193 KDLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 193 ~D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+|+|++++.++.+. ...|+.+++.++..
T Consensus 233 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 233 DEVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred HHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 99999999998753 34689999998864
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=139.58 Aligned_cols=194 Identities=16% Similarity=0.215 Sum_probs=130.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||+++++.|+++|++|++++|+++...... ..+.....++.++.+|++|.+++.+++++ .++|+
T Consensus 50 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~ 124 (285)
T 2c07_A 50 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI 124 (285)
T ss_dssp ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred ECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999888765422110 11122235688999999999999888854 27999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+||.. ..++.+++++ +. +..++|++||...+.... ....|.
T Consensus 125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~ 194 (285)
T 2c07_A 125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV----------GQANYS 194 (285)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCHHHH
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC----------CCchHH
Confidence 99999862 2233333443 33 668999999987653221 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..++++++++||.+.++.... ....+........+. ..+++++|+|++++.+
T Consensus 195 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~l 264 (285)
T 2c07_A 195 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPA---------GRMGTPEEVANLACFL 264 (285)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCCC---------CCCCCHHHHHHHHHHH
Confidence 89998887653 358999999999999875322 112222222222111 1368899999999999
Q ss_pred hcCCC--CCCceEEecCCc
Q 022578 203 LGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~ 219 (295)
+.++. ..|+.+++.++.
T Consensus 265 ~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 265 SSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp HSGGGTTCCSCEEEESTTS
T ss_pred hCCCcCCCCCCEEEeCCCc
Confidence 87632 368899998874
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=138.57 Aligned_cols=185 Identities=16% Similarity=0.151 Sum_probs=128.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++.. ..++.++.+|++|++++.++++.. ++|+
T Consensus 14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 77 (264)
T 2dtx_A 14 TGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV 77 (264)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998765 146889999999999998887642 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ +. +..++|++||...+.... ....|.
T Consensus 78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 147 (264)
T 2dtx_A 78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK----------NASAYV 147 (264)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT----------TBHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC----------CchhHH
Confidence 99999862 2233333433 33 567999999988753211 112344
Q ss_pred hhhHHHHHHhhh----cC--CcEEEeccCeeecCCCCCch------HH----HHHHHHHcCCCcccCCCCCceeeeeeHH
Q 022578 130 KGKLNTESVLES----KG--VNWTSLRPVYIYGPLNYNPV------EE----WFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 130 ~~k~~~E~~~~~----~~--~~~~i~R~~~i~g~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (295)
.+|+..+.+.+. .+ +++++++||.+.++...... .. .......... ....+++++
T Consensus 148 ~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~p~ 218 (264)
T 2dtx_A 148 TSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH---------PMQRIGKPQ 218 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHS---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcC---------CCCCCcCHH
Confidence 999999887632 22 89999999998776210000 00 0111111111 112468899
Q ss_pred HHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 194 DLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 194 D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
|+|++++.++..+ ...|+.+++.++..
T Consensus 219 dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 247 (264)
T 2dtx_A 219 EVASAVAFLASREASFITGTCLYVDGGLS 247 (264)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence 9999999998753 24688999988753
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-18 Score=143.52 Aligned_cols=205 Identities=16% Similarity=0.164 Sum_probs=137.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||++++++|+++|++|++++|+++...... ..+.+. ..++.++.+|++|++++.++++.. .+
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (267)
T 2gdz_A 13 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCK-----AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL 87 (267)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999865421100 001110 235889999999999998888742 68
Q ss_pred cEEEEcccCCh------------h----cHHHHHHhCC--C---CCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 74 DVVYDINGREA------------D----EVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 74 d~vi~~a~~~~------------~----~~~~ll~~~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
|++||+||... . .++.+++++. + ..++|++||...+.... ....|..+|
T Consensus 88 d~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~~sK 157 (267)
T 2gdz_A 88 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA----------QQPVYCASK 157 (267)
T ss_dssp CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----------TCHHHHHHH
T ss_pred CEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC----------CCchHHHHH
Confidence 99999998631 1 2455666665 2 57999999988764321 112345899
Q ss_pred HHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCccc---CCCCCceeeeeeHHHHHHHHH
Q 022578 133 LNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI---PGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 133 ~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~D~a~~i~ 200 (295)
...+.+.+ ..++++++++||.+.++.... +......+..... .........+++++|+|++++
T Consensus 158 ~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~ 232 (267)
T 2gdz_A 158 HGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-----IEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI 232 (267)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-----GGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-----cccccccchhhhHHHHHHHHhccccCCCHHHHHHHHH
Confidence 98877654 358999999999998762100 0000000000000 000001124678999999999
Q ss_pred HHhcCCCCCCceEEecCCcccCHHH
Q 022578 201 QVLGNEKASRQVFNISGEKYVTFDG 225 (295)
Q Consensus 201 ~~~~~~~~~~~~~~i~~~~~~t~~e 225 (295)
.++.++...|+.+++.+++.+++.|
T Consensus 233 ~l~s~~~~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 233 TLIEDDALNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp HHHHCTTCSSCEEEEETTTEEEECC
T ss_pred HHhcCcCCCCcEEEecCCCcccccC
Confidence 9998766789999999988776654
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4e-17 Score=134.85 Aligned_cols=197 Identities=14% Similarity=0.140 Sum_probs=135.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|+++ .|+.....+. ..++.....++.++.+|++|.+++++++++. ++|
T Consensus 10 TGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (258)
T 3oid_A 10 TGSSRGVGKAAAIRLAENGYNIVINYARSKKAALET-----AEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD 84 (258)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred ecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999997 6665442111 1112222357899999999999998888753 789
Q ss_pred EEEEcccC--------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGR--------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~--------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||. |..++.++++++ . +..++|++||...+.... ....|
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~Y 154 (258)
T 3oid_A 85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLE----------NYTTV 154 (258)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCT----------TCHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCC----------CcHHH
Confidence 99999985 223444455543 2 567999999987653211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|+..+.+.+ ..++++..++||.+.++..... ....+........+. ..+.+++|+|++++
T Consensus 155 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~ 225 (258)
T 3oid_A 155 GVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA---------GRMVEIKDMVDTVE 225 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT---------SSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence 599999888763 3589999999999988743211 112222322222221 23577999999999
Q ss_pred HHhcCCC--CCCceEEecCCccc
Q 022578 201 QVLGNEK--ASRQVFNISGEKYV 221 (295)
Q Consensus 201 ~~~~~~~--~~~~~~~i~~~~~~ 221 (295)
.++.+.. ..|+.+++.+|...
T Consensus 226 ~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 226 FLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp HHTSSTTTTCCSCEEEESTTGGG
T ss_pred HHhCcccCCccCCEEEECCCccC
Confidence 9987643 46899999998654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-16 Score=133.64 Aligned_cols=211 Identities=13% Similarity=0.121 Sum_probs=139.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc-------hhhhhccCCeEEEEecCCChHHHHHhhhcC--
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-- 71 (295)
|||+|+||.+++++|+++|++|++++|+............. ..+.....++.++.+|++|++++.+++++.
T Consensus 19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 98 (278)
T 3sx2_A 19 TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLD 98 (278)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 79999999999999999999999999884321111110000 111223467999999999999998888753
Q ss_pred ---CCcEEEEcccCC----------------hhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 72 ---GFDVVYDINGRE----------------ADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 72 ---~~d~vi~~a~~~----------------~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
.+|++||+||.. ..++.++++++. + ..++|++||...+..... +..+
T Consensus 99 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------~~~~ 171 (278)
T 3sx2_A 99 ELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS-------ADPG 171 (278)
T ss_dssp HHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC-------SSHH
T ss_pred HcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc-------CCCC
Confidence 799999999872 234455555532 2 568999999876532210 1011
Q ss_pred C-ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHH-HHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 126 K-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 126 ~-~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
. .|..+|+..+.+.+ ..|+++..++||.+.++..........+. ...........+.... ..+++++|+|
T Consensus 172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA 250 (278)
T 3sx2_A 172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVA 250 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHH
T ss_pred chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHH
Confidence 2 24499999887763 35799999999999998654322222221 2222222222222222 5678999999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++++.++.+. ...|+.+++.++.
T Consensus 251 ~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 251 NAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHhCcccccccCCEEeECCCc
Confidence 9999998753 3468899998875
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.9e-17 Score=134.85 Aligned_cols=198 Identities=15% Similarity=0.170 Sum_probs=135.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.+...+.. .++.+...++.++.+|++|++++.+++++. ++|+
T Consensus 12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 86 (257)
T 3imf_A 12 TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK-----LEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI 86 (257)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876532111 111222357899999999999998888753 7999
Q ss_pred EEEcccC--------------------ChhcHHHHHHhC-----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR--------------------EADEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||. |..++.++++++ + +..++|++||...+.... ....|
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 156 (257)
T 3imf_A 87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP----------GVIHS 156 (257)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT----------TCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC----------CcHHH
Confidence 9999985 222344444443 2 467999999987653211 11234
Q ss_pred chhhHHHHHHhh--------hcCCcEEEeccCeeecCCCCCch--HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 129 HKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 129 ~~~k~~~E~~~~--------~~~~~~~i~R~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..+|+..+.+.+ ..|+++..++||.+.++...... ...+........ ....+.+++|+|++
T Consensus 157 ~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~ 227 (257)
T 3imf_A 157 AAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV---------PLGRLGTPEEIAGL 227 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS---------TTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC---------CCCCCcCHHHHHHH
Confidence 489998877652 35899999999999988542211 000111111111 11246789999999
Q ss_pred HHHHhcCCC--CCCceEEecCCcccC
Q 022578 199 FVQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
++.++.+.. ..|+.+++.++..++
T Consensus 228 v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 228 AYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred HHHHcCchhcCccCCEEEECCCcccC
Confidence 999987643 368899999987554
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=135.81 Aligned_cols=192 Identities=17% Similarity=0.138 Sum_probs=131.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++...+.. .+...++.++.+|++|++++.+++++. ++|+
T Consensus 11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA--------RELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999875522111 111246889999999999988887642 7999
Q ss_pred EEEcccCCh--------------------hcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||... .++ +.++..++ +..++|++||...+.... ....|.
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 152 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA----------LTSSYG 152 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TCHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC----------CchhHH
Confidence 999998621 122 34555554 678999999988753211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeee-eHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG-HVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~D~a~~i~~ 201 (295)
.+|...+.+.+ ..++++++++||.++++.. ... ................+. +++|+|++++.
T Consensus 153 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---------~~~-~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~ 222 (254)
T 1hdc_A 153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT---------AET-GIRQGEGNYPNTPMGRVGNEPGEIAGAVVK 222 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---------HHH-TCCCSTTSCTTSTTSSCB-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc---------ccc-chhHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 99999887763 3589999999999988721 111 111100000111112356 89999999999
Q ss_pred HhcCC--CCCCceEEecCCcc
Q 022578 202 VLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~ 220 (295)
++.++ ...|+.+++.++..
T Consensus 223 l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 223 LLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp HHSGGGTTCCSCEEEESTTTT
T ss_pred HhCchhcCCCCCEEEECCCcc
Confidence 98764 24688999988753
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.3e-17 Score=137.04 Aligned_cols=207 Identities=15% Similarity=0.087 Sum_probs=135.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCC-CCCC-------chhhhhccCCeEEEEecCCChHHHHHhhhcC-
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-PGES-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~-------~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~- 71 (295)
|||+|+||.+++++|+++|++|++++|......... .... ...+.....++.++.+|++|++++.+++++.
T Consensus 21 TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (280)
T 3pgx_A 21 TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGM 100 (280)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 799999999999999999999999998643211000 0000 0111222357889999999999998888653
Q ss_pred ----CCcEEEEcccCC--------------------hhcHHHHHHhC----C--C-CCcEEEeeccccccCCCCCCCCCC
Q 022578 72 ----GFDVVYDINGRE--------------------ADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCET 120 (295)
Q Consensus 72 ----~~d~vi~~a~~~--------------------~~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~ 120 (295)
++|++||+||.. ..++.++++++ . + ..++|++||...+....
T Consensus 101 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 173 (280)
T 3pgx_A 101 EQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATP------- 173 (280)
T ss_dssp HHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT-------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCC-------
Confidence 799999999862 22344455553 2 3 56899999988753211
Q ss_pred CCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHc-CCCcccCCCCCceeeeeeH
Q 022578 121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 121 ~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~ 192 (295)
....|..+|+..+.+.+ ..|+++..++||.++++..........+..... ...+.. .. .....++++
T Consensus 174 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~r~~~p 248 (280)
T 3pgx_A 174 ---GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP-MP-VQPNGFMTA 248 (280)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC-BT-TBCSSCBCH
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh-cc-cCCCCCCCH
Confidence 11234599999887753 368999999999999986432111111111000 011111 11 112247899
Q ss_pred HHHHHHHHHHhcCCC--CCCceEEecCCc
Q 022578 193 KDLARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 193 ~D~a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+|+|++++.++.+.. ..|+.+++.++.
T Consensus 249 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 249 DEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp HHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred HHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 999999999987543 468899998875
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.3e-17 Score=137.40 Aligned_cols=196 Identities=17% Similarity=0.189 Sum_probs=124.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.+......... ...+.....++.++.+|++|.+++.+++++. ++|+
T Consensus 32 TGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 107 (272)
T 4e3z_A 32 TGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV----VAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG 107 (272)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 799999999999999999999988744433211111 1112223357899999999999998888753 7999
Q ss_pred EEEcccCC---------------------hhcHHHHHHh----CC-----CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE---------------------ADEVEPILDA----LP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~----~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|||+||.. ..++.+++++ +. +..++|++||...+..... ..
T Consensus 108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------~~ 178 (272)
T 4e3z_A 108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT---------QY 178 (272)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT---------TC
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC---------Cc
Confidence 99999862 1223333333 22 2458999999877533210 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..|..+|+..+.+.+ ..+++++.++||.+.++.................. ....+.+++|+|++
T Consensus 179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~edvA~~ 249 (272)
T 4e3z_A 179 VDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSV---------PMQRAGMPEEVADA 249 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CC---------TTSSCBCHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcC---------CcCCCcCHHHHHHH
Confidence 235599999887753 35899999999999998532211111111111111 12234679999999
Q ss_pred HHHHhcCCC--CCCceEEecCC
Q 022578 199 FVQVLGNEK--ASRQVFNISGE 218 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~ 218 (295)
++.++.... ..|+.|++.+|
T Consensus 250 i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 250 ILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCCccccccCCEEeecCC
Confidence 999987532 46889999886
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.7e-18 Score=140.87 Aligned_cols=195 Identities=14% Similarity=0.089 Sum_probs=133.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+.....+. ..+...++.++.+|++|++++.+++++. ++|+
T Consensus 35 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 35 TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA--------ATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1222357899999999999988887653 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|.
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~----------~~~~Y~ 176 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVG----------GTGAYG 176 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT----------TBHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC----------CchhHH
Confidence 99999862 22344444443 2 556899999987643211 112344
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCC--Cc-ccCCC---CCceeeeeeHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR--PI-PIPGS---GIQVTQLGHVKDLA 196 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~--~~-~~~~~---~~~~~~~i~~~D~a 196 (295)
.+|+..+.+.+ ..|+++..++||.++++.. ....... .. ..... ......+.+++|+|
T Consensus 177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA 247 (277)
T 3gvc_A 177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ---------QTAMAMFDGALGAGGARSMIARLQGRMAAPEEMA 247 (277)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---------HHHHTCC------CCHHHHHHHHHSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH---------HHhhhcchhhHHHHhhhhhhhccccCCCCHHHHH
Confidence 99999887763 4689999999999988721 1110000 00 00000 00112467899999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCcccC
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
++++.++.+. ...|+.+++.+|...+
T Consensus 248 ~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 248 GIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred HHHHHHcCCccCCccCcEEEECCcchhc
Confidence 9999998753 3468999999986543
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=137.18 Aligned_cols=197 Identities=19% Similarity=0.193 Sum_probs=137.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+. ..+...++.++.+|++|.+++..+++.. .+|+
T Consensus 14 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 14 IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARI--------REEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999987653211 1222357899999999999888777542 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||+||.. ..++.++++++. ...++|++||...+.... ....|..+
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~as 155 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP----------GMSVYSAS 155 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT----------TBHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC----------CchHHHHH
Confidence 99999862 224455555543 345899999988753221 11224499
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-ch----HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|...+.+.+ ..|+++..++||.+.++.... .. ...+........+. ..+.+++|+|+++
T Consensus 156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v 226 (255)
T 4eso_A 156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNGTADEVARAV 226 (255)
T ss_dssp HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCcCHHHHHHHH
Confidence 999887763 358999999999999985321 11 11122222222221 2346799999999
Q ss_pred HHHhcC-CCCCCceEEecCCcccCHH
Q 022578 200 VQVLGN-EKASRQVFNISGEKYVTFD 224 (295)
Q Consensus 200 ~~~~~~-~~~~~~~~~i~~~~~~t~~ 224 (295)
+.++.+ ....|+.+++.++...++.
T Consensus 227 ~~L~s~~~~itG~~i~vdGG~~~~l~ 252 (255)
T 4eso_A 227 LFLAFEATFTTGAKLAVDGGLGQKLS 252 (255)
T ss_dssp HHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred HHHcCcCcCccCCEEEECCCccccCc
Confidence 998875 2346889999998766543
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.3e-18 Score=140.60 Aligned_cols=196 Identities=14% Similarity=0.067 Sum_probs=124.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC--CCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~ 78 (295)
|||+|+||.+++++|+++|++|++++|++.+.. . . +.+|+++.+++++++++. ++|++||
T Consensus 7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~--~-~~~Dl~~~~~v~~~~~~~~~~id~lv~ 68 (257)
T 1fjh_A 7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------A--D-LSTAEGRKQAIADVLAKCSKGMDGLVL 68 (257)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C--C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------c--c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence 799999999999999999999999999876521 1 1 568999999999998743 6799999
Q ss_pred cccCCh-------------hcHHHHHHhC-----C-CCCcEEEeeccccccCCCCCCCCCC-----------------CC
Q 022578 79 INGREA-------------DEVEPILDAL-----P-NLEQFIYCSSAGVYLKSDLLPHCET-----------------DT 122 (295)
Q Consensus 79 ~a~~~~-------------~~~~~ll~~~-----~-~~~~~i~~Ss~~v~~~~~~~~~~e~-----------------~~ 122 (295)
+||... .++.++++++ + +..++|++||...+......+..+. .+
T Consensus 69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T 1fjh_A 69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE 148 (257)
T ss_dssp CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence 998743 2444555553 2 5589999999988732111111000 11
Q ss_pred CCCCc-cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 123 VDPKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 123 ~~p~~-~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
..+.. |..+|...+.+.+ ..++++++++||.+.++................. +.. ....+++++|
T Consensus 149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~d 221 (257)
T 1fjh_A 149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK--FVP-----PMGRRAEPSE 221 (257)
T ss_dssp THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCC-----STTSCCCTHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHh--ccc-----ccCCCCCHHH
Confidence 11222 4489999888763 3589999999999988743211000000000000 000 1123678999
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
+|++++.++..+ ...|+.+++.++..+
T Consensus 222 vA~~~~~l~~~~~~~~tG~~~~vdgG~~~ 250 (257)
T 1fjh_A 222 MASVIAFLMSPAASYVHGAQIVIDGGIDA 250 (257)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred HHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence 999999998764 346889999887543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=132.71 Aligned_cols=186 Identities=15% Similarity=0.182 Sum_probs=130.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+..... ..+..+.+|++|.+++.+++++. .+|+
T Consensus 20 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 20 TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------------NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---------------TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---------------CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876631 35678999999999998888653 8999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ +. +..++|++||...+..... ...|.
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~ 154 (269)
T 3vtz_A 85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN----------AAAYV 154 (269)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT----------CHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC----------ChhHH
Confidence 99999862 2234444444 32 5679999999887643211 12345
Q ss_pred hhhHHHHHHhh----h--cCCcEEEeccCeeecCCCCC----------chHHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 022578 130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 130 ~~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (295)
.+|+..+.+.+ + .++++..++||.+.++.... ..............+ ...+.+++
T Consensus 155 asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pe 225 (269)
T 3vtz_A 155 TSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP---------MGRIGRPE 225 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST---------TSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC---------CCCCcCHH
Confidence 99999988763 2 27999999999998863100 000111111111111 12457899
Q ss_pred HHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 194 DLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 194 D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
|+|++++.++... ...|+.+++.++..
T Consensus 226 dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 226 EVAEVVAFLASDRSSFITGACLTVDGGLL 254 (269)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence 9999999998753 34688999999854
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=140.24 Aligned_cols=211 Identities=16% Similarity=0.122 Sum_probs=140.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccC---CeEEEEecCCChHHHHHhhhcC-----C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~-----~ 72 (295)
|||+|+||.+++++|+++|++|++++|+++...... .++..... ++.++.+|++|++++.+++++. +
T Consensus 32 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 106 (297)
T 1xhl_A 32 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK 106 (297)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 799999999999999999999999999876522110 11111122 6889999999999988887642 7
Q ss_pred CcEEEEcccCCh----------------------hcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGREA----------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 73 ~d~vi~~a~~~~----------------------~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+|++||+||... .++.++++++ . ...++|++||...+.... ...
T Consensus 107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~---------~~~ 177 (297)
T 1xhl_A 107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH---------SGY 177 (297)
T ss_dssp CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC---------TTS
T ss_pred CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCC---------CCc
Confidence 999999998521 1223444443 2 227999999987753210 111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc---hH-----HHHHHHHHcCCCcccCCCCCceeeee
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---VE-----EWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
..|..+|+..+.+.+ ..|+++++++||.+.++..... .. ....... ....+ ...+.
T Consensus 178 ~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~~p-------~~r~~ 248 (297)
T 1xhl_A 178 PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR--KECIP-------VGHCG 248 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC--TTTCT-------TSSCB
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHH--HhcCC-------CCCCc
Confidence 234599999887763 4689999999999998732100 00 0011111 01111 12468
Q ss_pred eHHHHHHHHHHHhcCC---CCCCceEEecCCcccCHHHHHHHHHHHh
Q 022578 191 HVKDLARAFVQVLGNE---KASRQVFNISGEKYVTFDGLARACAKVT 234 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~---~~~~~~~~i~~~~~~t~~e~~~~i~~~~ 234 (295)
+++|+|++++.++..+ ...|+.+++.++..+.+.+.+..+.+.+
T Consensus 249 ~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~ 295 (297)
T 1xhl_A 249 KPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSVL 295 (297)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHHT
T ss_pred CHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhhh
Confidence 8999999999998754 3568899999998777666655555443
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.8e-17 Score=133.73 Aligned_cols=194 Identities=13% Similarity=0.124 Sum_probs=129.2
Q ss_pred CCcCC-cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+| .||.+++++|+++|++|++++|+........ .++.+. ..++.++.+|++|.++++++++.. .+
T Consensus 28 TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 102 (266)
T 3o38_A 28 TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR-----DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL 102 (266)
T ss_dssp SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence 79998 5999999999999999999999876532111 111111 257999999999999998888753 78
Q ss_pred cEEEEcccCC--------------------hhcHHHHHHhCC-------CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGRE--------------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
|++||+||.. ..++.++++++. +..++|++||...+... .+.
T Consensus 103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~ 171 (266)
T 3o38_A 103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ-----------HSQ 171 (266)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC-----------TTC
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC-----------CCC
Confidence 9999999862 223444444432 34589999998765321 122
Q ss_pred c-cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 127 S-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 127 ~-~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
. |..+|+..+.+.+ ..++++..++||.+.++.............. ........+.+++|+|++
T Consensus 172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~dva~~ 242 (266)
T 3o38_A 172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRL---------ASDEAFGRAAEPWEVAAT 242 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------CCTTSSCCCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHH---------HhcCCcCCCCCHHHHHHH
Confidence 3 4499999888763 3689999999999988743211111111111 111122346789999999
Q ss_pred HHHHhcCC--CCCCceEEecCCc
Q 022578 199 FVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++.++.+. ...|+.+++.++.
T Consensus 243 i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 243 IAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp HHHHHSGGGTTCCSCEEEESSCC
T ss_pred HHHHcCccccCccCCEEEEcCCc
Confidence 99998763 3468899998874
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-17 Score=136.45 Aligned_cols=195 Identities=16% Similarity=0.163 Sum_probs=134.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+. ..+...++.++.+|++|.+++++++++. ++|+
T Consensus 33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 33 TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV--------ANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1122357899999999999998888753 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ ++ +..++|++||...+.... ....|.
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 174 (277)
T 4dqx_A 105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA----------DRTAYV 174 (277)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT----------TBHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC----------CChhHH
Confidence 99999962 2234444444 33 556999999988753211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
.+|+..+.+.+ ..|+++..++||.+.++... ............... ....+.+++|+|+
T Consensus 175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~~pedvA~ 245 (277)
T 4dqx_A 175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA---------VMDRMGTAEEIAE 245 (277)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS---------TTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC---------cccCCcCHHHHHH
Confidence 99999887763 35899999999999876200 000011111111111 2234578999999
Q ss_pred HHHHHhcCCC--CCCceEEecCCcccC
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
+++.++.+.. ..|+.+++.+|..++
T Consensus 246 ~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 246 AMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp HHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred HHHHHhCCccCCCcCCEEEECCchhhh
Confidence 9999987543 468999999986543
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-17 Score=136.85 Aligned_cols=199 Identities=17% Similarity=0.112 Sum_probs=127.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+. ..+...++.++.+|++|.+++.+++++. ++|+
T Consensus 15 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 15 TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV--------AGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999987663211 1222357899999999999998888753 7899
Q ss_pred EEEcccCC---------------------hhcHHHHHHhC----C--C----CCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE---------------------ADEVEPILDAL----P--N----LEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~----~--~----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
+||+||.. ..++.++++++ . + ..++|++||...+.... .
T Consensus 87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~ 156 (261)
T 3n74_A 87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP----------N 156 (261)
T ss_dssp EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT----------T
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC----------C
Confidence 99999862 12233344443 2 1 44699999987653211 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
...|..+|+..+.+.+ ..++++..++||.+.++...... ... ................+++++|+|+
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~dva~ 230 (261)
T 3n74_A 157 LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM-----GED-SEEIRKKFRDSIPMGRLLKPDDLAE 230 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc-----ccC-cHHHHHHHhhcCCcCCCcCHHHHHH
Confidence 1224599999888763 36899999999999887432110 000 0000000111122235688999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCcccCH
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKYVTF 223 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~~t~ 223 (295)
+++.++... ...|+.+++.++..++.
T Consensus 231 ~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 231 AAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred HHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 999998643 34689999999876654
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=8.4e-17 Score=133.16 Aligned_cols=200 Identities=12% Similarity=0.072 Sum_probs=134.9
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+ |+||++++++|+++|++|++++|++.. .+. ..++.+...++.++.+|++|++++.++++.. ++
T Consensus 14 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~-----~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (261)
T 2wyu_A 14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL-RPE-----AEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL 87 (261)
T ss_dssp ESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG-HHH-----HHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred ECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHH-----HHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 7998 999999999999999999999998641 100 0111221234789999999999998887643 78
Q ss_pred cEEEEcccCCh------------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .++.++++++. +..++|++||...+.... ..
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~ 157 (261)
T 2wyu_A 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP----------KY 157 (261)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT----------TC
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC----------Cc
Confidence 99999998532 13455666654 235999999977653211 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..++++++++||.++++..... ....+...+....+. ..+.+++|+|+
T Consensus 158 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~ 228 (261)
T 2wyu_A 158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVGN 228 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------SSCCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------CCCCCHHHHHH
Confidence 234589999887763 3489999999999999853211 112222322222221 12467999999
Q ss_pred HHHHHhcCCC--CCCceEEecCCcccCHHH
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEKYVTFDG 225 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~~~t~~e 225 (295)
+++.++.... ..|+.|++.++..++..|
T Consensus 229 ~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~ 258 (261)
T 2wyu_A 229 LGLFLLSPLASGITGEVVYVDAGYHIMGME 258 (261)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred HHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence 9999986532 358899999986655333
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-17 Score=139.34 Aligned_cols=200 Identities=14% Similarity=0.054 Sum_probs=134.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|+||.+++++|+++|++|++++|+..+..... .+...++.++.+|++|.+++++++++. ++|++||+
T Consensus 22 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n 93 (291)
T 3rd5_A 22 TGANSGLGAVTARELARRGATVIMAVRDTRKGEAAA--------RTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN 93 (291)
T ss_dssp ECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------TTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999999999999999976632211 111257899999999999999999865 78999999
Q ss_pred ccC------------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCC-CCCC-CCCCCCCCc-cchhhHHHH
Q 022578 80 NGR------------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPHC-ETDTVDPKS-RHKGKLNTE 136 (295)
Q Consensus 80 a~~------------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~-~~~~-e~~~~~p~~-~~~~k~~~E 136 (295)
||. |..++.++++++. ..+++|++||...+..... .... +..+..+.. |..+|+..+
T Consensus 94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~ 173 (291)
T 3rd5_A 94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANL 173 (291)
T ss_dssp CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHH
Confidence 986 2345677777765 4459999999887754221 1111 112223333 449999988
Q ss_pred HHhh-------hcC--CcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 022578 137 SVLE-------SKG--VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 207 (295)
Q Consensus 137 ~~~~-------~~~--~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 207 (295)
.+.+ ..+ +++..++||.+..+..... ...+.... ...+ ..+-..+++|+|++++.++.++.
T Consensus 174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~-----~~~~----~~~~~~~~~~~A~~~~~l~~~~~ 243 (291)
T 3rd5_A 174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS-GRKLGDAL-----MSAA----TRVVATDADFGARQTLYAASQDL 243 (291)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc-chHHHHHH-----HHHH----HHHHhCCHHHHHHHHHHHHcCCC
Confidence 7763 235 9999999999988743211 00010000 0000 11122458999999999998866
Q ss_pred CCCceEEecCC
Q 022578 208 ASRQVFNISGE 218 (295)
Q Consensus 208 ~~~~~~~i~~~ 218 (295)
..|+.+.+.++
T Consensus 244 ~~G~~~~vdgG 254 (291)
T 3rd5_A 244 PGDSFVGPRFG 254 (291)
T ss_dssp CTTCEEEETTS
T ss_pred CCCceeCCccc
Confidence 67888887664
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.1e-17 Score=136.05 Aligned_cols=186 Identities=18% Similarity=0.177 Sum_probs=130.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+..... ....+.+|++|.+++..+++.. ++|+
T Consensus 34 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~ 97 (266)
T 3uxy_A 34 TGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------ADLHLPGDLREAAYADGLPGAVAAGLGRLDI 97 (266)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999876522 2234578999998887776542 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-c
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~ 128 (295)
+||+||.. ..++.++++++ + +..++|++||...+... .+.. |
T Consensus 98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 166 (266)
T 3uxy_A 98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG-----------PGHALY 166 (266)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC-----------TTBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-----------CCChHH
Confidence 99999862 23455555554 3 67799999998765321 1223 4
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC------chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
..+|+..+.+.+ ..|+++..++||.+.++.... .............. ....+.+++|+
T Consensus 167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedv 237 (266)
T 3uxy_A 167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV---------PLGRIAEPEDI 237 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS---------TTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC---------CCCCCcCHHHH
Confidence 599999887763 358999999999998873100 00011111121211 22346789999
Q ss_pred HHHHHHHhcCCC--CCCceEEecCCcccC
Q 022578 196 ARAFVQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 196 a~~i~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
|++++.++.+.. ..|+.+++.++..++
T Consensus 238 A~~v~~L~s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 238 ADVVLFLASDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence 999999987643 468999999987553
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.5e-17 Score=136.71 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=137.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+.. .++.....++.++.+|++|++++..+++.. ++|+
T Consensus 14 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 88 (280)
T 3tox_A 14 TGASSGIGRAAALLFAREGAKVVVTARNGNALAELT-----DEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT 88 (280)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876532111 111222357889999999999998887642 7999
Q ss_pred EEEcccCC---------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE---------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++.++++++ . +..++|++||...+... ......|
T Consensus 89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~~Y 159 (280)
T 3tox_A 89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG---------FAGVAPY 159 (280)
T ss_dssp EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC---------CTTCHHH
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC---------CCCchhH
Confidence 99999852 22344444443 2 45699999998765210 0111234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc---hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..+|+..+.+.+ ..|+++..++||.+.++..... .............+. ..+.+++|+|++
T Consensus 160 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~ 230 (280)
T 3tox_A 160 AASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL---------KRIARPEEIAEA 230 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT---------SSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc---------CCCcCHHHHHHH
Confidence 599999887763 3589999999999999853210 011122222222221 235789999999
Q ss_pred HHHHhcCCC--CCCceEEecCCcccCHH
Q 022578 199 FVQVLGNEK--ASRQVFNISGEKYVTFD 224 (295)
Q Consensus 199 i~~~~~~~~--~~~~~~~i~~~~~~t~~ 224 (295)
++.++.+.. ..|+.+++.+|..++..
T Consensus 231 v~~L~s~~a~~itG~~i~vdGG~~~~~~ 258 (280)
T 3tox_A 231 ALYLASDGASFVTGAALLADGGASVTKA 258 (280)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGGCC-
T ss_pred HHHHhCccccCCcCcEEEECCCcccccc
Confidence 999987642 46899999999766543
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=135.88 Aligned_cols=200 Identities=18% Similarity=0.172 Sum_probs=130.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++..... ...+.....++.++.+|++|++++.+++++. ++|+
T Consensus 8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (256)
T 1geg_A 8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAV-----ASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 82 (256)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999987552211 0111222346889999999999998888642 7999
Q ss_pred EEEcccCC--------------------hhcHHHHH----HhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPIL----DALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll----~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++.+++ ..+. + ..++|++||...+.... ....|
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 152 (256)
T 1geg_A 83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP----------ELAVY 152 (256)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------TBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC----------CchhH
Confidence 99999852 11233333 3333 4 57999999987542211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHc-----CCC-cccCCCCCceeeeeeHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-----GRP-IPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~D~ 195 (295)
..+|...+.+.+ ..++++++++||.+.++.. ..+...... ... ............+.+++|+
T Consensus 153 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv 227 (256)
T 1geg_A 153 SSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW-----AEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDV 227 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH-----HHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchh-----hhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHH
Confidence 589998887763 3589999999999988621 111100000 000 0000000011246889999
Q ss_pred HHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 196 ARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 196 a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
|++++.++..+ ...|+.+.+.++..
T Consensus 228 A~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 228 AACVSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 99999998754 34688999988753
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.9e-17 Score=132.94 Aligned_cols=200 Identities=16% Similarity=0.220 Sum_probs=130.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhc----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~----~~~d 74 (295)
|||+|+||++++++|+++|++|++++|+++...... .++... ..++.++.+|++|++++..++++ .++|
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid 87 (260)
T 2z1n_A 13 TAGSSGLGFASALELARNGARLLLFSRNREKLEAAA-----SRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD 87 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999999999999875522110 011111 12688999999999998888763 2599
Q ss_pred EEEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..++ +.++..+. +..++|++||...+.... ....|
T Consensus 88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 157 (260)
T 2z1n_A 88 ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ----------DLALS 157 (260)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC----------CCchh
Confidence 999999852 2223 44444444 678999999988764211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHH-----HHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
..+|...+.+.+ ..|+++++++||.++++........ .+........ + ........+.+++|+|
T Consensus 158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~p~~r~~~~~dva 233 (260)
T 2z1n_A 158 NIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKS-M---ASRIPMGRVGKPEELA 233 (260)
T ss_dssp HHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC---------------------------CCTTSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHH-H---HhcCCCCCccCHHHHH
Confidence 489998887753 3589999999999999854210000 0000000000 0 0000112357899999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++++.++..+ ...|+.+++.++.
T Consensus 234 ~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 234 SVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHhCccccCCCCCEEEeCCCc
Confidence 9999998753 3468899998874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.4e-18 Score=140.09 Aligned_cols=195 Identities=19% Similarity=0.237 Sum_probs=131.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++..... ..++.+...++.++.+|++|++++.+++++. ++|+
T Consensus 28 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (277)
T 2rhc_B 28 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTT-----LKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV 102 (277)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999987552211 0111222356889999999999988887642 6999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC--------CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP--------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~--------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||+||.. ..++.++++++. +..++|++||...+... .....
T Consensus 103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~ 172 (277)
T 2rhc_B 103 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV----------VHAAP 172 (277)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC----------TTCHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC----------CCCcc
Confidence 99999852 223444444432 35799999998764221 11123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchH----------HHHHHHHHcCCCcccCCCCCceeeee
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----------EWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
|..+|...+.+.+ ..++++++++||.++++....... ........... ....++
T Consensus 173 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~ 243 (277)
T 2rhc_B 173 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV---------PIGRYV 243 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHS---------TTSSCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcC---------CCCCCc
Confidence 4599999887763 247999999999998873110000 00011111111 112468
Q ss_pred eHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 191 HVKDLARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+++|+|++++.++.++ ...|+.+++.++.
T Consensus 244 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 244 QPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 8999999999998764 2468899998874
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.4e-17 Score=132.93 Aligned_cols=193 Identities=14% Similarity=0.144 Sum_probs=127.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCC-CccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||+|+||.+++++|+++|++|++++|++ +...+ .+.+...++.++.+|++|++++.+++++ .++|
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 13 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--------AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--------HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--------HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 79999999999999999999999999987 43211 1222235688999999999998887653 2799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..++.+++++ ++ +..++|++||...+.... ....|
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 154 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE----------AYTHY 154 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS----------SCHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC----------CchhH
Confidence 999999862 2233333333 43 668999999988764311 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+.+ ..|+++++++||.+.++.......... ..... . +.. ....+.+++|+|++++.
T Consensus 155 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~-~-~~~-----~~~~~~~p~dva~~~~~ 226 (249)
T 2ew8_A 155 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVLP-N-MLQ-----AIPRLQVPLDLTGAAAF 226 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------C-TTS-----SSCSCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHHH-H-hhC-----ccCCCCCHHHHHHHHHH
Confidence 589999887763 358999999999999874320000000 00000 1 101 11246789999999999
Q ss_pred HhcCC--CCCCceEEecCCc
Q 022578 202 VLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~ 219 (295)
++... ...|+.+++.++.
T Consensus 227 l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 227 LASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp HTSGGGTTCCSCEEEESSSC
T ss_pred HcCcccCCCCCcEEEECCCc
Confidence 98753 3468889998874
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.6e-17 Score=133.35 Aligned_cols=187 Identities=14% Similarity=0.108 Sum_probs=130.9
Q ss_pred CCcCCcchHHHHHHHHHCCC-------eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--- 70 (295)
|||+|+||++++++|+++|+ +|++++|++...... ...+.....++.++.+|++|++++.++++.
T Consensus 8 TGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (244)
T 2bd0_A 8 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKI-----SLECRAEGALTDTITADISDMADVRRLTTHIVE 82 (244)
T ss_dssp ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHH-----HHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHH-----HHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence 79999999999999999999 999999986542111 011111134688999999999999888864
Q ss_pred --CCCcEEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCC
Q 022578 71 --KGFDVVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (295)
Q Consensus 71 --~~~d~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~ 122 (295)
.++|+|||+||.. ..++.++++++ . +..++|++||...+....
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------- 153 (244)
T 2bd0_A 83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR--------- 153 (244)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCC---------
Confidence 2699999999852 23445555554 2 668999999988764211
Q ss_pred CCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 123 ~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
....|..+|...+.+.+ ..+++++++|||.++++...... . .. ...+++++|+
T Consensus 154 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~------~~--~~~~~~~~dv 213 (244)
T 2bd0_A 154 -HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-----------D------EM--QALMMMPEDI 213 (244)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-----------S------TT--GGGSBCHHHH
T ss_pred -CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-----------c------cc--cccCCCHHHH
Confidence 11234599999887762 46899999999999998532100 0 00 1257899999
Q ss_pred HHHHHHHhcCCCC--CCceEEecCCccc
Q 022578 196 ARAFVQVLGNEKA--SRQVFNISGEKYV 221 (295)
Q Consensus 196 a~~i~~~~~~~~~--~~~~~~i~~~~~~ 221 (295)
|++++.++..+.. .++.+...+++.+
T Consensus 214 a~~~~~l~~~~~~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 214 AAPVVQAYLQPSRTVVEEIILRPTSGDI 241 (244)
T ss_dssp HHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred HHHHHHHHhCCccccchheEEecccccc
Confidence 9999999986532 3555666555443
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=138.69 Aligned_cols=196 Identities=15% Similarity=0.155 Sum_probs=135.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.....+. ...+.+...++.++.+|++|.+++.+++++. .+|+
T Consensus 34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (270)
T 3ftp_A 34 TGASRGIGRAIALELARRGAMVIGTATTEAGAEGI-----GAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV 108 (270)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1112223357889999999999988888653 7999
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGR--------------------EADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||. |..++.++++++. +..++|++||...+.... ....|.
T Consensus 109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 178 (270)
T 3ftp_A 109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP----------GQVNYA 178 (270)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TBHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC----------CchhHH
Confidence 9999986 2234455555532 567899999987653221 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|+++..++||.+.++.... .............+ ...+.+++|+|++++.+
T Consensus 179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L 248 (270)
T 3ftp_A 179 AAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-LPQEQQTALKTQIP---------LGRLGSPEDIAHAVAFL 248 (270)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-SCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-cCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHH
Confidence 99998887653 368999999999998762110 01111222222221 12457899999999999
Q ss_pred hcCC--CCCCceEEecCCccc
Q 022578 203 LGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~~ 221 (295)
+... ...|+.+++.++..+
T Consensus 249 ~s~~~~~itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 249 ASPQAGYITGTTLHVNGGMFM 269 (270)
T ss_dssp HSGGGTTCCSCEEEESTTSSC
T ss_pred hCCCcCCccCcEEEECCCccc
Confidence 8643 346899999998654
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=132.81 Aligned_cols=198 Identities=16% Similarity=0.206 Sum_probs=133.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||++++++|+++|++|++++|+++...... .++.+. ..++.++.+|++|++++.+++++. ++
T Consensus 19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 93 (267)
T 1iy8_A 19 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI 93 (267)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999875522110 111111 346889999999999998888643 78
Q ss_pred cEEEEcccCChh---------------------c----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 74 d~vi~~a~~~~~---------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
|++||+||.... + ++.++..++ +..++|++||...+.... ...
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~ 163 (267)
T 1iy8_A 94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG----------NQS 163 (267)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS----------SBH
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCC----------CCc
Confidence 999999985311 1 233444444 678999999987653211 112
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-------chHHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (295)
.|..+|...+.+.+ ..|++++.++||.++++.... .............. ....+.++
T Consensus 164 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~~ 234 (267)
T 1iy8_A 164 GYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN---------PSKRYGEA 234 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC---------TTCSCBCH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC---------CCCCCcCH
Confidence 34599999887763 358999999999998862100 00000000111111 11246789
Q ss_pred HHHHHHHHHHhcCC--CCCCceEEecCCcccC
Q 022578 193 KDLARAFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 193 ~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
+|+|++++.++.++ ...|+.+++.++..++
T Consensus 235 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 235 PEIAAVVAFLLSDDASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred HHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence 99999999998754 3468899998886543
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-16 Score=129.91 Aligned_cols=179 Identities=15% Similarity=0.081 Sum_probs=120.7
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcC------
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK------ 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~------ 71 (295)
|||+|+||.+++++|+++| ++|++++|++...... .+ ...++.++.+|++|.+++.+++++.
T Consensus 9 tGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (250)
T 1yo6_A 9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL---------KSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS 79 (250)
T ss_dssp SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH---------HTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred ecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH---------HhccCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 7999999999999999999 9999999987653211 11 1357899999999999998888753
Q ss_pred -CCcEEEEcccCCh---------------------hcHHHHHHhCC-----C------------CCcEEEeeccccccCC
Q 022578 72 -GFDVVYDINGREA---------------------DEVEPILDALP-----N------------LEQFIYCSSAGVYLKS 112 (295)
Q Consensus 72 -~~d~vi~~a~~~~---------------------~~~~~ll~~~~-----~------------~~~~i~~Ss~~v~~~~ 112 (295)
++|+|||+||... .++.++++++. . ..+||++||...+...
T Consensus 80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 159 (250)
T 1yo6_A 80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD 159 (250)
T ss_dssp GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence 7999999998632 23444555543 2 6799999998775432
Q ss_pred CCCCCCCCCCCCCCc-cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCC
Q 022578 113 DLLPHCETDTVDPKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 184 (295)
Q Consensus 113 ~~~~~~e~~~~~p~~-~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (295)
.. +..+..+.. |..+|+..+.+.+ ..++++++++||.+.++....
T Consensus 160 ~~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------- 212 (250)
T 1yo6_A 160 NT----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------- 212 (250)
T ss_dssp CC----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------
T ss_pred cc----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------------
Confidence 11 111112333 4499999888763 248999999999987762110
Q ss_pred ceeeeeeHHHHHHHHHHHhcCCC--CCCceEEecC
Q 022578 185 QVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISG 217 (295)
Q Consensus 185 ~~~~~i~~~D~a~~i~~~~~~~~--~~~~~~~i~~ 217 (295)
..+++++|+|+.++.++..+. ..|..+.+.+
T Consensus 213 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g 245 (250)
T 1yo6_A 213 --NAALTVEQSTAELISSFNKLDNSHNGRFFMRNL 245 (250)
T ss_dssp --------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred --CCCCCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence 135789999999999998754 2455555443
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.2e-17 Score=134.16 Aligned_cols=194 Identities=16% Similarity=0.186 Sum_probs=132.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+..... ..+...++.++.+|++|++++.+++++. ++|+
T Consensus 18 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 18 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--------AKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHH--------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 79999999999999999999999999987653211 1112357899999999999998888643 7999
Q ss_pred EEEcccCC--------------------------hhcHHHHHHhCC------------CCCcEEEeeccccccCCCCCCC
Q 022578 76 VYDINGRE--------------------------ADEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPH 117 (295)
Q Consensus 76 vi~~a~~~--------------------------~~~~~~ll~~~~------------~~~~~i~~Ss~~v~~~~~~~~~ 117 (295)
|||+||.. ..++.++++++. +..++|++||...+....
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---- 165 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV---- 165 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT----
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCC----
Confidence 99999852 112334444432 246899999988764321
Q ss_pred CCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeee
Q 022578 118 CETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 118 ~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
....|..+|...+.+.+ ..++++++++||.+.++.... ............. +.. ..++
T Consensus 166 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~--~~~------~~~~ 230 (265)
T 2o23_A 166 ------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQV--PFP------SRLG 230 (265)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTC--SSS------CSCB
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-cCHHHHHHHHHcC--CCc------CCCC
Confidence 11234589998877653 358999999999998874321 0000111111111 110 2357
Q ss_pred eHHHHHHHHHHHhcCCCCCCceEEecCCccc
Q 022578 191 HVKDLARAFVQVLGNEKASRQVFNISGEKYV 221 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~ 221 (295)
+++|+|++++.++......|+.+++.++..+
T Consensus 231 ~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 231 DPAEYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp CHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred CHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence 8999999999999876667899999888544
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.7e-17 Score=136.67 Aligned_cols=198 Identities=17% Similarity=0.238 Sum_probs=124.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ ..++.....++.++.+|++|++++.+++++. .+|+
T Consensus 35 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 110 (280)
T 4da9_A 35 TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV----IAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC 110 (280)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHH----HHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred ecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999997543311110 1112223357899999999999888887653 8999
Q ss_pred EEEcccCC----------------------hhcHHHHHHhC----C--C---CCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE----------------------ADEVEPILDAL----P--N---LEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 76 vi~~a~~~----------------------~~~~~~ll~~~----~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
+||+||.. ..++.++++++ . + ..++|++||...+.... .
T Consensus 111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----------~ 180 (280)
T 4da9_A 111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP----------E 180 (280)
T ss_dssp EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------------C
T ss_pred EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC----------C
Confidence 99999861 12333344442 2 2 56899999987653211 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
...|..+|+..+.+.+ ..|+++..++||.+.++..... ..........+ ......+.+++|+|+
T Consensus 181 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~--------~~p~~r~~~pedvA~ 251 (280)
T 4da9_A 181 RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV-SGKYDGLIESG--------LVPMRRWGEPEDIGN 251 (280)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CCBCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc-chhHHHHHhhc--------CCCcCCcCCHHHHHH
Confidence 1235599999887763 3689999999999988743211 00011111010 112234578999999
Q ss_pred HHHHHhcCCC--CCCceEEecCCccc
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEKYV 221 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~~~ 221 (295)
+++.++.... ..|+.+++.+|..+
T Consensus 252 ~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 252 IVAGLAGGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp HHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred HHHHHhCccccCCCCCEEEECCCccc
Confidence 9999997654 46899999988543
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=7.8e-17 Score=133.98 Aligned_cols=200 Identities=17% Similarity=0.161 Sum_probs=132.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++.... +.+...++.++.+|++|++++.+++++. ++|+
T Consensus 15 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 85 (270)
T 1yde_A 15 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA---------LEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 85 (270)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998755221 1111235889999999999998887643 7999
Q ss_pred EEEcccCC---------------------hhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE---------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|.
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 155 (270)
T 1yde_A 86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------QAVPYV 155 (270)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----------TCHHHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC----------CCcccH
Confidence 99999852 12334444443 2 457999999976532211 112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-----chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
.+|+..+.+.+ ..|+++++++||.++++.... ......+.......++ ..+..++|+|+
T Consensus 156 asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~ 226 (270)
T 1yde_A 156 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVGA 226 (270)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC---------CCCcCHHHHHH
Confidence 99999887763 368999999999999873100 0000000111111111 12467999999
Q ss_pred HHHHHhcCC-CCCCceEEecCCcccCHHHHHH
Q 022578 198 AFVQVLGNE-KASRQVFNISGEKYVTFDGLAR 228 (295)
Q Consensus 198 ~i~~~~~~~-~~~~~~~~i~~~~~~t~~e~~~ 228 (295)
+++.++.+. ...|+.+++.++..+.+.+...
T Consensus 227 ~v~~L~s~~~~itG~~i~vdGG~~~~~~~~~~ 258 (270)
T 1yde_A 227 AAVFLASEANFCTGIELLVTGGAELGYGCKAS 258 (270)
T ss_dssp HHHHHHHHCTTCCSCEEEESTTTTSCC-----
T ss_pred HHHHHcccCCCcCCCEEEECCCeecccCcCcc
Confidence 999988653 3468899999987666544433
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.3e-17 Score=133.68 Aligned_cols=201 Identities=17% Similarity=0.152 Sum_probs=131.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCc--cccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||.+++++|+++|++|++++|++.. .... ...+.....++.++.+|++|++++.+++++. ++
T Consensus 8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (258)
T 3a28_C 8 TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAET-----IKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF 82 (258)
T ss_dssp ETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 7999999999999999999999999998654 2111 0111222356889999999999988877642 79
Q ss_pred cEEEEcccCC--------------------hhcHHHHHHh----CC--CC-CcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGRE--------------------ADEVEPILDA----LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~~~~ll~~----~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
|++||+||.. ..++.+++++ +. +. .++|++||...+.... ...
T Consensus 83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~ 152 (258)
T 3a28_C 83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFP----------ILS 152 (258)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCT----------TCH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCC----------Cch
Confidence 9999999862 1223334444 32 55 7999999987653211 112
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHH--cCC--C--cccCCCCCceeeeeeHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGR--P--IPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~--~~~--~--~~~~~~~~~~~~~i~~~ 193 (295)
.|..+|...+.+.+ ..++++++++||.+.++.. ........ .+. . ............+.+++
T Consensus 153 ~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 227 (258)
T 3a28_C 153 AYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMW-----EQIDAELSKINGKPIGENFKEYSSSIALGRPSVPE 227 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHH-----HHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhh-----hhhhhhhccccCCchHHHHHHHHhcCCCCCccCHH
Confidence 34599999887763 3589999999999877621 11010000 000 0 00000000112367899
Q ss_pred HHHHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 194 DLARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 194 D~a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
|+|++++.++... ...|+.+++.++..+
T Consensus 228 dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 228 DVAGLVSFLASENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred HHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence 9999999998754 346889999887543
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.7e-17 Score=135.28 Aligned_cols=199 Identities=13% Similarity=0.161 Sum_probs=133.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ ...+.....++.++.+|++|.++++++++.. ++|+
T Consensus 31 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 106 (269)
T 3gk3_A 31 TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTW----LMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV 106 (269)
T ss_dssp TTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHH----HHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999986554321110 0011222357899999999999988887653 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|.
T Consensus 107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 176 (269)
T 3gk3_A 107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF----------GQANYA 176 (269)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TBHHHH
T ss_pred EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC----------CcchHH
Confidence 99999862 22344444443 2 567999999987653211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|+++..++||.+..+...... ......... .......+.+++|+|++++.+
T Consensus 177 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-----~~~~~~~~~----~~~~~~~~~~p~dvA~~v~~L 247 (269)
T 3gk3_A 177 SAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP-----QDVLEAKIL----PQIPVGRLGRPDEVAALIAFL 247 (269)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCSG----GGCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc-----hhHHHHHhh----hcCCcCCccCHHHHHHHHHHH
Confidence 99998887753 35899999999999987532211 111111111 111123456899999999999
Q ss_pred hcCCC--CCCceEEecCCcccC
Q 022578 203 LGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~~~t 222 (295)
+.+.. ..|+.+++.+|..++
T Consensus 248 ~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 248 CSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp TSTTCTTCCSCEEEESTTSCCC
T ss_pred hCCCcCCeeCcEEEECCCEeCc
Confidence 87643 468899999986553
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=132.49 Aligned_cols=196 Identities=17% Similarity=0.202 Sum_probs=131.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++|+........ .++ .....++.++.+|++|++++.+++++. ++|
T Consensus 27 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 101 (267)
T 1vl8_A 27 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-----QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 101 (267)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999865522110 011 112356888999999999988887642 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeecccc-ccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~p~~ 127 (295)
++||+||.. ..++.+++++ ++ +..++|++||..+ +.. ......
T Consensus 102 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~~~ 171 (267)
T 1vl8_A 102 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT----------MPNISA 171 (267)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC----------SSSCHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC----------CCCChh
Confidence 999999862 2233344333 33 5689999999873 211 011123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|+..+.+.+ ..|+++++++||.+.++...... ............+. ..+++++|+|+++
T Consensus 172 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dvA~~v 242 (267)
T 1vl8_A 172 YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL---------GRTGVPEDLKGVA 242 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT---------SSCBCGGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCC---------CCCcCHHHHHHHH
Confidence 4599999988763 35899999999999887421100 01111222222111 1357899999999
Q ss_pred HHHhcCC--CCCCceEEecCCcc
Q 022578 200 VQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+.++... ...|+.+.+.++..
T Consensus 243 ~~l~s~~~~~itG~~i~vdGG~~ 265 (267)
T 1vl8_A 243 VFLASEEAKYVTGQIIFVDGGWT 265 (267)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHcCccccCCcCCeEEECCCCC
Confidence 9998753 24688899988743
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-16 Score=131.57 Aligned_cols=193 Identities=16% Similarity=0.153 Sum_probs=133.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.+......... ...+.+...++.++.+|++|.+++.+++++. .+|+
T Consensus 32 TGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 107 (267)
T 4iiu_A 32 TGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQET----LNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG 107 (267)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 799999999999999999999988765543311110 1112233467999999999999998888653 8999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC------C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~------~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++.++++++ + +..++|++||...+.... ....|
T Consensus 108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 177 (267)
T 4iiu_A 108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR----------GQVNY 177 (267)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT----------TCHHH
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC----------CCchh
Confidence 99999862 23455555553 2 567999999977653221 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|+..+.+.+ ..++++..++||.+.++..... ...........+. ..+.+++|+|++++.
T Consensus 178 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~---------~~~~~~edva~~~~~ 246 (267)
T 4iiu_A 178 SAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPM---------KRMGQAEEVAGLASY 246 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTT---------CSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence 599997776652 3589999999999999864322 2233333333222 134679999999999
Q ss_pred HhcCC--CCCCceEEecCC
Q 022578 202 VLGNE--KASRQVFNISGE 218 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~ 218 (295)
++... ...|+.+++.+|
T Consensus 247 L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 247 LMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCCcccCccCCEEEeCCC
Confidence 98753 346889999886
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-17 Score=137.84 Aligned_cols=198 Identities=15% Similarity=0.163 Sum_probs=136.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+. ..++.....++.++.+|++|.+++.+++++. ++|+
T Consensus 32 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (271)
T 4ibo_A 32 TGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQT-----VQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI 106 (271)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHH-----HHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 79999999999999999999999999987653221 1122233457899999999999998888753 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ +. +..++|++||...+.... ....|.
T Consensus 107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~----------~~~~Y~ 176 (271)
T 4ibo_A 107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARA----------TVAPYT 176 (271)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT----------TCHHHH
T ss_pred EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCC----------CchhHH
Confidence 99999862 2234444444 32 557999999977642211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|...+.+.+ ..|+++..++||.+.++...... ...+........+. ..+.+++|+|++++.
T Consensus 177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~ 247 (271)
T 4ibo_A 177 VAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA---------KRWGKPQELVGTAVF 247 (271)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT---------CSCBCGGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence 99999887763 36899999999999987421100 01122222222222 234668999999999
Q ss_pred HhcCC--CCCCceEEecCCcccC
Q 022578 202 VLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~~t 222 (295)
++... ...|+.+++.+|...+
T Consensus 248 L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 248 LSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp HHSGGGTTCCSCEEEESTTGGGB
T ss_pred HhCccccCCCCcEEEECCCeecc
Confidence 98753 3468899999986543
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=130.78 Aligned_cols=194 Identities=15% Similarity=0.190 Sum_probs=131.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|+++|++|++++| ++....+. ..++.....++.++.+|++|++++.+++++. ++|
T Consensus 10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 84 (246)
T 2uvd_A 10 TGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEV-----VDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD 84 (246)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999 44331110 0111222356889999999999998888642 799
Q ss_pred EEEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..+ ++.++..+. +..++|++||...+.... ....|
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 154 (246)
T 2uvd_A 85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP----------GQANY 154 (246)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TBHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCC----------CCchH
Confidence 999999862 122 333444443 668999999987643211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+.+ ..++++++++||.+.++..... ............+ ...+++++|+|++++.
T Consensus 155 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~ 224 (246)
T 2uvd_A 155 VAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL-DENIKAEMLKLIP---------AAQFGEAQDIANAVTF 224 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC-CTTHHHHHHHTCT---------TCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc-CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence 489998877652 4689999999999988743211 0111111212111 1236889999999999
Q ss_pred HhcCCC--CCCceEEecCCc
Q 022578 202 VLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~~--~~~~~~~i~~~~ 219 (295)
++..+. ..|+.+++.++.
T Consensus 225 l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 225 FASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp HHSGGGTTCCSCEEEESTTS
T ss_pred HcCchhcCCCCCEEEECcCc
Confidence 987532 358899998874
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5e-17 Score=135.26 Aligned_cols=195 Identities=18% Similarity=0.193 Sum_probs=131.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.......+ ...+.....++.++.+|++|.+++.+++++. ++|+
T Consensus 35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 110 (271)
T 4iin_A 35 TGASKGIGAEIAKTLASMGLKVWINYRSNAEVADAL----KNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY 110 (271)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999755422111 1112223357899999999999988888653 8999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ ++ +..++|++||...+.... ....|.
T Consensus 111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 180 (271)
T 4iin_A 111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM----------GQTNYS 180 (271)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TCHHHH
T ss_pred EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC----------CchHhH
Confidence 99999862 2233333333 33 567999999987653211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..++++..++||.+..+.... +...... .. ........+.+++|+|++++.+
T Consensus 181 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~-~~----~~~~~~~~~~~p~dvA~~i~~l 250 (271)
T 4iin_A 181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-----LKDELKA-DY----VKNIPLNRLGSAKEVAEAVAFL 250 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------------C----GGGCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-----hcHHHHH-HH----HhcCCcCCCcCHHHHHHHHHHH
Confidence 99999887763 368999999999998874211 1111100 00 1111223467899999999999
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+.+. ...|+.+++.+|.
T Consensus 251 ~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 251 LSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp HSGGGTTCCSCEEEESTTS
T ss_pred hCCCcCCCcCCEEEeCCCe
Confidence 8753 2468899998875
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-17 Score=134.05 Aligned_cols=204 Identities=16% Similarity=0.142 Sum_probs=129.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCc-cccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+|+||.+++++|+++|++|++++|++.. ..... ..+... ..++.++.+|++|++++.+++++ .++
T Consensus 10 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 84 (260)
T 1x1t_A 10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR-----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI 84 (260)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH-----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred eCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH-----HHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999999998754 22110 111111 34688999999999999888764 279
Q ss_pred cEEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|++||+||.. ..++.++++++ . +..++|++||...+.... ....
T Consensus 85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~ 154 (260)
T 1x1t_A 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA----------NKSA 154 (260)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TCHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCC----------CCch
Confidence 9999999862 12333344443 3 567999999988753211 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHH-c-CCCcccC-CCCCceeeeeeHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-A-GRPIPIP-GSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~i~~~D~a~ 197 (295)
|..+|...+.+.+ ..+++++.++||.+.++...... ........ . ....... ........+.+++|+|+
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~ 233 (260)
T 1x1t_A 155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI-SALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGG 233 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhh-hhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHH
Confidence 4599999887763 34899999999999988432110 00000000 0 0000000 00001134688999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCcc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+++.++... ...|+.+++.++..
T Consensus 234 ~~~~l~s~~~~~~tG~~~~vdgG~~ 258 (260)
T 1x1t_A 234 TAVFLASDAAAQITGTTVSVDGGWT 258 (260)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHhChhhcCCCCCEEEECCCcc
Confidence 999998753 24688999988743
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.1e-17 Score=134.51 Aligned_cols=195 Identities=15% Similarity=0.189 Sum_probs=134.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+.. .++.....++.++.+|++|.+++.+++++. .+|+
T Consensus 30 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 104 (279)
T 3sju_A 30 TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-----DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI 104 (279)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 799999999999999999999999999876532111 112222357899999999999988887653 7899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC------C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL------P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~------~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~----------~~~~ 174 (279)
T 3sju_A 105 LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVM----------YAAP 174 (279)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCT----------TCHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCC----------CChh
Confidence 99999862 22344444432 2 567999999988653211 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC----------chHHHHHHHHHcCCCcccCCCCCceeeee
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
|..+|+..+.+.+ ..|+++..++||.+.++.... ..............+ ...+.
T Consensus 175 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~ 245 (279)
T 3sju_A 175 YTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP---------LGRYS 245 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT---------TSSCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC---------CCCCC
Confidence 5599998887763 368999999999998762100 001112222222211 12457
Q ss_pred eHHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 022578 191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+++|+|++++.++.+.. ..|+.+++.+|.
T Consensus 246 ~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 246 TPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp CHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 79999999999987643 468899998875
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.70 E-value=4.4e-17 Score=135.11 Aligned_cols=191 Identities=16% Similarity=0.214 Sum_probs=130.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+.....+. ..+...++.++.+|++|+++++++++.. ++|+
T Consensus 33 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 33 TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI--------AADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1222357899999999999998887642 7999
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..+ ++.++..+. +..++|++||...+.... ....|.
T Consensus 105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----------~~~~Y~ 174 (266)
T 3grp_A 105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP----------GQTNYC 174 (266)
T ss_dssp EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------------CHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC----------CchhHH
Confidence 99999962 223 333444443 667999999977643211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|+++..++||.+.++..... ............+. ..+.+++|+|++++.+
T Consensus 175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~---------~r~~~~edvA~~v~~L 244 (266)
T 3grp_A 175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL-NEKQKEAIMAMIPM---------KRMGIGEEIAFATVYL 244 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC-CHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc-CHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence 99998877653 3589999999999988632111 11222223233222 2356799999999999
Q ss_pred hcCCC--CCCceEEecCCc
Q 022578 203 LGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~ 219 (295)
+.+.. ..|+.+++.++.
T Consensus 245 ~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 245 ASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp HSGGGTTCCSCEEEESTTC
T ss_pred hCccccCccCCEEEECCCe
Confidence 87542 368899998875
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-17 Score=138.59 Aligned_cols=186 Identities=15% Similarity=0.111 Sum_probs=122.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...... .++.....++.++.+|++|.+++.++++.. ++|+
T Consensus 37 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 111 (301)
T 3tjr_A 37 TGGASGIGLATATEFARRGARLVLSDVDQPALEQAV-----NGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV 111 (301)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence 799999999999999999999999999876632211 112222357899999999999998888653 7999
Q ss_pred EEEcccC--------------------ChhcHHHHHHhC----C--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR--------------------EADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||. |..++.++++++ . + ..++|++||...+.... ....|
T Consensus 112 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 181 (301)
T 3tjr_A 112 VFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA----------GLGTY 181 (301)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT----------TBHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC----------CchHH
Confidence 9999986 223455555553 2 3 56999999988753211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHH-----HHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
..+|...+.+.+ ..|++++.++||.+..+.. ...... .....+...++.......+++++|+|
T Consensus 182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA 256 (301)
T 3tjr_A 182 GVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV-----SNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVA 256 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH-----HHHHHHC----------------------CCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc-----cccccccchhhccccChhhhccccccccCCCCHHHHH
Confidence 599998887652 3589999999999887621 111000 00111111122223345678999999
Q ss_pred HHHHHHhcCC
Q 022578 197 RAFVQVLGNE 206 (295)
Q Consensus 197 ~~i~~~~~~~ 206 (295)
++++.++..+
T Consensus 257 ~~i~~~l~~~ 266 (301)
T 3tjr_A 257 RLTADAILAN 266 (301)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 9999999864
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-16 Score=131.40 Aligned_cols=175 Identities=10% Similarity=0.107 Sum_probs=128.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+..+. ....+.+|++|.+++.+++++. .+|+
T Consensus 28 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-----------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~ 90 (251)
T 3orf_A 28 LGGSGALGAEVVKFFKSKSWNTISIDFRENPN-----------------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDT 90 (251)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------SSEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------cccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999998762 2245788999999998888753 6799
Q ss_pred EEEcccC---------------------ChhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cc
Q 022578 76 VYDINGR---------------------EADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RH 129 (295)
Q Consensus 76 vi~~a~~---------------------~~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~ 129 (295)
|||+||. |..++.++++++. ...++|++||...+... .+.. |.
T Consensus 91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 159 (251)
T 3orf_A 91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT-----------SGMIAYG 159 (251)
T ss_dssp EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTBHHHH
T ss_pred EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC-----------CCCchhH
Confidence 9999985 2223444555543 33589999998875321 1222 44
Q ss_pred hhhHHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 130 ~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|+..+.+.+ ..++++..++||.+.++. ........ ....+++++|+|++++
T Consensus 160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~---------~~~~~~~~---------~~~~~~~~~dva~~i~ 221 (251)
T 3orf_A 160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT---------NRKYMSDA---------NFDDWTPLSEVAEKLF 221 (251)
T ss_dssp HHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH---------HHHHCTTS---------CGGGSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc---------hhhhcccc---------cccccCCHHHHHHHHH
Confidence 99999888763 357999999999987751 12221111 2235678999999999
Q ss_pred HHhcC---CCCCCceEEecCCccc
Q 022578 201 QVLGN---EKASRQVFNISGEKYV 221 (295)
Q Consensus 201 ~~~~~---~~~~~~~~~i~~~~~~ 221 (295)
.++.+ ....|+.+++.+++..
T Consensus 222 ~l~~~~~~~~~tG~~i~v~~g~~~ 245 (251)
T 3orf_A 222 EWSTNSDSRPTNGSLVKFETKSKV 245 (251)
T ss_dssp HHHHCGGGCCCTTCEEEEEEETTE
T ss_pred HHhcCccccCCcceEEEEecCCcc
Confidence 99987 4457888998776543
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.3e-17 Score=135.14 Aligned_cols=196 Identities=14% Similarity=0.139 Sum_probs=133.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----CCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v 76 (295)
|||+|+||.+++++|+++|++|++++|.... .+. ..++.....++.++.+|++|.+++.++.+. .++|++
T Consensus 37 TGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l 110 (273)
T 3uf0_A 37 TGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEV-----ADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL 110 (273)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHH-----HHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence 7999999999999999999999999976432 110 111222235789999999999988777542 279999
Q ss_pred EEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 77 YDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 77 i~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
||+||.. ..++.++++++ . +..++|++||...+.... ....|..
T Consensus 111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~----------~~~~Y~a 180 (273)
T 3uf0_A 111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR----------NVAAYAA 180 (273)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS----------SCHHHHH
T ss_pred EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC----------CChhHHH
Confidence 9999862 23444555543 2 667999999988753211 1123459
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
+|+..+.+.+ ..|+++..++||.++++..... .............+. ..+.+++|+|++++.+
T Consensus 181 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~L 251 (273)
T 3uf0_A 181 SKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA---------GRWATPEDMVGPAVFL 251 (273)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT---------SSCBCGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence 9999887763 3689999999999998742110 001111222222211 2356799999999999
Q ss_pred hcCC--CCCCceEEecCCccc
Q 022578 203 LGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~~ 221 (295)
+.+. ...|+.+++.+|..+
T Consensus 252 ~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 252 ASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp HSGGGTTCCSCEEEESTTGGG
T ss_pred hCchhcCCcCCEEEECcCccC
Confidence 8763 346899999998654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=131.50 Aligned_cols=191 Identities=16% Similarity=0.172 Sum_probs=134.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+. ......+...+.+|++|++++++++++. ++|+
T Consensus 15 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 86 (248)
T 3op4_A 15 TGASRGIGKAIAELLAERGAKVIGTATSESGAQAI--------SDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI 86 (248)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1112245788999999999998888753 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|.
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 156 (248)
T 3op4_A 87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA----------GQANYA 156 (248)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TCHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC----------CChHHH
Confidence 99999862 22344455443 2 567999999977653211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..|+++..++||.+..+..... ............+. ..+.+++|+|++++.+
T Consensus 157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~p~---------~r~~~p~dva~~v~~L 226 (248)
T 3op4_A 157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL-NDEQRTATLAQVPA---------GRLGDPREIASAVAFL 226 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS-CHHHHHHHHHTCTT---------CSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc-CHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence 99998887653 4689999999999988754221 11122222222221 2457899999999999
Q ss_pred hcCCC--CCCceEEecCCc
Q 022578 203 LGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~~--~~~~~~~i~~~~ 219 (295)
+.+.. ..|+.+++.++.
T Consensus 227 ~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 227 ASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp HSGGGTTCCSCEEEESTTS
T ss_pred cCCccCCccCcEEEECCCe
Confidence 87532 368899998875
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.70 E-value=8e-17 Score=133.58 Aligned_cols=179 Identities=17% Similarity=0.138 Sum_probs=125.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+... .++.++.+|++|.+++.++++.. ++|+
T Consensus 22 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 90 (266)
T 3p19_A 22 TGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-----------PNTLCAQVDVTDKYTFDTAITRAEKIYGPADA 90 (266)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-----------TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-----------CCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence 7999999999999999999999999998766432221 47889999999999988888643 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ +. +..++|++||...+.... ....|.
T Consensus 91 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~----------~~~~Y~ 160 (266)
T 3p19_A 91 IVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFP----------DHAAYC 160 (266)
T ss_dssp EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT----------TCHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCC----------CCchHH
Confidence 99999862 2234444433 33 678999999988753211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|+++..++||.+.++................. ..+ ...+++++|+|++++.+
T Consensus 161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~-------~~r~~~pedvA~av~~l 232 (266)
T 3p19_A 161 GTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD-------MGGVLAADDVARAVLFA 232 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH-------TTCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc-------ccCCCCHHHHHHHHHHH
Confidence 99999887653 3689999999999998743211111111111110 011 12357899999999999
Q ss_pred hcCCCC
Q 022578 203 LGNEKA 208 (295)
Q Consensus 203 ~~~~~~ 208 (295)
+.++..
T Consensus 233 ~~~~~~ 238 (266)
T 3p19_A 233 YQQPQN 238 (266)
T ss_dssp HHSCTT
T ss_pred HcCCCC
Confidence 987643
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.70 E-value=1e-16 Score=132.28 Aligned_cols=192 Identities=17% Similarity=0.195 Sum_probs=131.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC----CCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~v 76 (295)
|||+|+||.+++++|+++|++|++++|+.....+ ....++.++.+|++|.+++..+++.. .+|++
T Consensus 15 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l 83 (257)
T 3tl3_A 15 TGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA-----------DLGDRARFAAADVTDEAAVASALDLAETMGTLRIV 83 (257)
T ss_dssp ETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH-----------HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH-----------hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 7999999999999999999999999996554222 22357999999999999988877643 89999
Q ss_pred EEcccCC------------------------hhcHHHHHHhCC--------------CCCcEEEeeccccccCCCCCCCC
Q 022578 77 YDINGRE------------------------ADEVEPILDALP--------------NLEQFIYCSSAGVYLKSDLLPHC 118 (295)
Q Consensus 77 i~~a~~~------------------------~~~~~~ll~~~~--------------~~~~~i~~Ss~~v~~~~~~~~~~ 118 (295)
||+||.. ..++.++++++. +..++|++||...+....
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 158 (257)
T 3tl3_A 84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI----- 158 (257)
T ss_dssp EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH-----
T ss_pred EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC-----
Confidence 9999852 122333444321 234899999987652211
Q ss_pred CCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 119 ETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 119 e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
....|..+|...+.+.+ ..|+++..++||.+..+.... .............+. + ..+.+
T Consensus 159 -----~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--~------~r~~~ 224 (257)
T 3tl3_A 159 -----GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPH--P------SRLGN 224 (257)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSS--S------CSCBC
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCC--C------CCccC
Confidence 01124489998887653 468999999999998875322 112222222222211 1 23578
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEecCCcccC
Q 022578 192 VKDLARAFVQVLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t 222 (295)
++|+|++++.++.++...|+.+++.++..++
T Consensus 225 p~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 225 PDEYGALAVHIIENPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp HHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence 9999999999998866789999999986554
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-16 Score=131.09 Aligned_cols=196 Identities=16% Similarity=0.131 Sum_probs=131.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++++........ ..++.....++.++.+|++|.+++.+++++. .+|+
T Consensus 24 TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 99 (270)
T 3is3_A 24 TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKV----VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI 99 (270)
T ss_dssp SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999887654421111 1122233467899999999999998888753 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cch
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~ 130 (295)
+||+||.. ..++.+++++ +....++|++||..... .+..+.. |..
T Consensus 100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~~Y~a 169 (270)
T 3is3_A 100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD----------FSVPKHSLYSG 169 (270)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT----------CCCTTCHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc----------CCCCCCchhHH
Confidence 99999862 2234444444 33446999999976311 0111223 449
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCC-----------CchHHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (295)
+|+..+.+.+ ..|+++..++||.+.++... ...............+. ..+.++
T Consensus 170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p 240 (270)
T 3is3_A 170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL---------HRNGWP 240 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT---------CSCBCH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC---------CCCCCH
Confidence 9999887763 36899999999999987421 00011111222121111 234679
Q ss_pred HHHHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 193 KDLARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 193 ~D~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+|+|++++.++... ...|+.+++.+|.
T Consensus 241 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 241 QDVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 99999999998653 2468899998874
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.9e-17 Score=137.03 Aligned_cols=197 Identities=12% Similarity=0.161 Sum_probs=132.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-----ccCCeEEEEecCCChHHHHHhhhcC----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAK---- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~~~~~~~---- 71 (295)
|||+|+||++++++|+++|++|++++|+........ .++.. ...++.++.+|++|.+++..+++..
T Consensus 24 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 98 (303)
T 1yxm_A 24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAA-----DELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 98 (303)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 799999999999999999999999999865422110 01111 1357899999999999998888742
Q ss_pred -CCcEEEEcccC--------------------ChhcHHHHHHhCC------CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 72 -GFDVVYDINGR--------------------EADEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 72 -~~d~vi~~a~~--------------------~~~~~~~ll~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
++|+|||+||. |..++.++++++. +..++|++||...++. ..
T Consensus 99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~ 167 (303)
T 1yxm_A 99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF-----------PL 167 (303)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-----------TT
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC-----------Cc
Confidence 69999999984 2334556666532 4578999999873211 01
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch---HHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
...|..+|...+.+.+ ..|++++++|||.++++...... ...+....... . ....+.+++|
T Consensus 168 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----~-----p~~~~~~~~d 238 (303)
T 1yxm_A 168 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK----I-----PAKRIGVPEE 238 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG----S-----TTSSCBCTHH
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc----C-----cccCCCCHHH
Confidence 1224488888776653 35899999999999998421110 01011000000 1 1123688999
Q ss_pred HHHHHHHHhcCCC--CCCceEEecCCcccC
Q 022578 195 LARAFVQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 195 ~a~~i~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
+|++++.++.... ..|+.+++.++..++
T Consensus 239 vA~~i~~l~~~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 239 VSSVVCFLLSPAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence 9999999987532 468899999986543
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-16 Score=129.97 Aligned_cols=194 Identities=14% Similarity=0.126 Sum_probs=130.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhc-cCCeEEEEecCCCh----HHHHHhhhcC---
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY----DFVKSSLSAK--- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~----~~~~~~~~~~--- 71 (295)
|||+|+||.+++++|+++|++|++++| ++...... ..++.+. ..++.++.+|++|. +++..++++.
T Consensus 17 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 91 (276)
T 1mxh_A 17 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRL-----VAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 91 (276)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH-----HHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence 799999999999999999999999999 54432111 0111111 35688999999999 8888877643
Q ss_pred --CCcEEEEcccCCh--------------------h-----------cHHHHHHh----CC-CC------CcEEEeeccc
Q 022578 72 --GFDVVYDINGREA--------------------D-----------EVEPILDA----LP-NL------EQFIYCSSAG 107 (295)
Q Consensus 72 --~~d~vi~~a~~~~--------------------~-----------~~~~ll~~----~~-~~------~~~i~~Ss~~ 107 (295)
++|++||+||... + ++.+++++ +. +. .++|++||..
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~ 171 (276)
T 1mxh_A 92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 171 (276)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence 7999999998521 1 22233333 32 33 7999999988
Q ss_pred cccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccC
Q 022578 108 VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180 (295)
Q Consensus 108 v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 180 (295)
.+.... ....|..+|...+.+.+ ..|+++++++||.++++ .. .............+.
T Consensus 172 ~~~~~~----------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~--~~~~~~~~~~~~~p~--- 235 (276)
T 1mxh_A 172 TDLPLP----------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA--MPQETQEEYRRKVPL--- 235 (276)
T ss_dssp GGSCCT----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS--SCHHHHHHHHTTCTT---
T ss_pred hcCCCC----------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc--CCHHHHHHHHhcCCC---
Confidence 763211 11234599999887763 35899999999999998 31 122222333222111
Q ss_pred CCCCceeeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCcc
Q 022578 181 GSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 181 ~~~~~~~~~i~~~D~a~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
+ +.+.+++|+|++++.++.... ..|+.+++.++..
T Consensus 236 ~-----r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 272 (276)
T 1mxh_A 236 G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272 (276)
T ss_dssp T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence 1 126789999999999987532 3588999988753
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-16 Score=130.34 Aligned_cols=189 Identities=18% Similarity=0.171 Sum_probs=130.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|++++.... .+. .++.++.+|++|++++.++++.. .+|+
T Consensus 11 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 80 (245)
T 1uls_A 11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREA---------AEA-VGAHPVVMDVADPASVERGFAEALAHLGRLDG 80 (245)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHT-TTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHH-cCCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986552211 111 14788999999999998887742 6999
Q ss_pred EEEcccCC--------------------hhcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++ ..+. +..++|++||...++.. ....|.
T Consensus 81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~Y~ 149 (245)
T 1uls_A 81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-----------GQANYA 149 (245)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-----------TCHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC-----------CchhHH
Confidence 99999862 22333343 3333 56799999998743211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..|+++++++||.+..+..... ............+. ..+.+++|+|++++.+
T Consensus 150 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~---------~~~~~~~dvA~~v~~l 219 (245)
T 1uls_A 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-PEKVREKAIAATPL---------GRAGKPLEVAYAALFL 219 (245)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-CHHHHHHHHHTCTT---------CSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-CHHHHHHHHhhCCC---------CCCcCHHHHHHHHHHH
Confidence 89998877653 4689999999999988753221 11122222222111 1257899999999999
Q ss_pred hcCC--CCCCceEEecCCcc
Q 022578 203 LGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~ 220 (295)
+.++ ...|+.+.+.++..
T Consensus 220 ~s~~~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 220 LSDESSFITGQVLFVDGGRT 239 (245)
T ss_dssp HSGGGTTCCSCEEEESTTTT
T ss_pred hCchhcCCcCCEEEECCCcc
Confidence 8753 24688999988754
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-16 Score=129.12 Aligned_cols=167 Identities=17% Similarity=0.123 Sum_probs=113.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++..... +.....++.++.+|++|.+++.++++.. ++|+
T Consensus 11 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 11 TGASRGIGEATARLLHAKGYRVGLMARDEKRLQA---------LAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998655211 1111236889999999999988877642 7899
Q ss_pred EEEcccCCh--------------------hcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||++|... .++ +.+++.++ +.+++|++||...+.... ....|.
T Consensus 82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~ 151 (234)
T 2ehd_A 82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFK----------GGAAYN 151 (234)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCT----------TCHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCC----------CCchhh
Confidence 999998521 122 34455544 678999999987753211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..+++++++|||.+..+.... . . .. ..+++++|+|++++.+
T Consensus 152 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~-~-~~----------~~~~~~~dvA~~~~~l 210 (234)
T 2ehd_A 152 ASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN---------T-P-GQ----------AWKLKPEDVAQAVLFA 210 (234)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc---------c-c-cc----------cCCCCHHHHHHHHHHH
Confidence 99998877652 368999999999987762110 0 0 00 0157899999999999
Q ss_pred hcCCC
Q 022578 203 LGNEK 207 (295)
Q Consensus 203 ~~~~~ 207 (295)
+.++.
T Consensus 211 ~~~~~ 215 (234)
T 2ehd_A 211 LEMPG 215 (234)
T ss_dssp HHSCC
T ss_pred hCCCc
Confidence 87653
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-16 Score=132.94 Aligned_cols=197 Identities=16% Similarity=0.165 Sum_probs=134.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||.+++++|+++|++|++++|+.+...+.. .++.+ ...++.++.+|++|+++++++++.. ++|
T Consensus 26 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 100 (266)
T 4egf_A 26 TGATKGIGADIARAFAAAGARLVLSGRDVSELDAAR-----RALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD 100 (266)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999876532111 11111 2457999999999999888877643 899
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
++||+||.. ..++.++++++ . + ..++|++||...+.... ....
T Consensus 101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~ 170 (266)
T 4egf_A 101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP----------DHYA 170 (266)
T ss_dssp EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------TCHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC----------CChH
Confidence 999999862 22344444443 2 2 46999999988753211 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|+..+.+.+ ..|+++..++||.+.++...... ............+. ..+.+++|+|+++
T Consensus 171 Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~~v 241 (266)
T 4egf_A 171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL---------GRFAVPHEVSDAV 241 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT---------SSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence 4599998887753 35899999999999886310000 01111222222211 2346799999999
Q ss_pred HHHhcCC--CCCCceEEecCCccc
Q 022578 200 VQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
+.++.+. ...|+.+++.++..+
T Consensus 242 ~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 242 VWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHhCchhcCccCcEEEECCCccC
Confidence 9998763 346889999988654
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-17 Score=138.25 Aligned_cols=198 Identities=21% Similarity=0.231 Sum_probs=134.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||+|+||.+++++|+++|++|++++|+..... ... ...+.....++.++.+|++|.+++++++++ .++|
T Consensus 55 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 130 (294)
T 3r3s_A 55 TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQV----KALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD 130 (294)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH----HHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHH----HHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999988743211 000 111222345788999999999988887764 2899
Q ss_pred EEEEcccCC---------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 75 VVYDINGRE---------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 75 ~vi~~a~~~---------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
++||+||.. ..++.++++++. ...++|++||...+.... ....|.
T Consensus 131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~----------~~~~Y~ 200 (294)
T 3r3s_A 131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP----------HLLDYA 200 (294)
T ss_dssp EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT----------TCHHHH
T ss_pred EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC----------CchHHH
Confidence 999999862 223455555543 345999999988764321 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCC-CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|+..+.+.+ ..|+++..++||.++++.. .... ................+..++|+|++++.
T Consensus 201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 271 (294)
T 3r3s_A 201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ---------TQDKIPQFGQQTPMKRAGQPAELAPVYVY 271 (294)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTS---------CGGGSTTTTTTSTTSSCBCGGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCC---------CHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999887763 3589999999999998631 0000 00001111122222346789999999999
Q ss_pred HhcCC--CCCCceEEecCCccc
Q 022578 202 VLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~~ 221 (295)
++... ...|+.+++.+|..+
T Consensus 272 L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 272 LASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp HHSGGGTTCCSCEEEESTTCCC
T ss_pred HhCccccCCCCCEEEECCCccC
Confidence 98753 246899999998654
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=132.60 Aligned_cols=203 Identities=14% Similarity=0.101 Sum_probs=136.8
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+ |+||.+++++|+++|++|++++|+.... .. ..++.+...++.++.+|++|.+++..++++. .+
T Consensus 20 TGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 93 (271)
T 3ek2_A 20 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DR-----ITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL 93 (271)
T ss_dssp CCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HH-----HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred eCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HH-----HHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 7988 9999999999999999999999984331 11 1112222356889999999999999888753 78
Q ss_pred cEEEEcccCCh-------------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA-------------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 74 d~vi~~a~~~~-------------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
|++||+||... .++.++++++. ...++|++||...+.... .
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------~ 163 (271)
T 3ek2_A 94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP----------N 163 (271)
T ss_dssp EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT----------T
T ss_pred CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC----------C
Confidence 99999998632 12444555543 345899999987653211 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|+..+.+.+ ..|+++..++||.+..+...... ...+........+. ..+.+++|+|
T Consensus 164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedva 234 (271)
T 3ek2_A 164 YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQVG 234 (271)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence 1234589999887763 35899999999999987543221 12233333333222 1246799999
Q ss_pred HHHHHHhcC--CCCCCceEEecCCcccCHHHHHH
Q 022578 197 RAFVQVLGN--EKASRQVFNISGEKYVTFDGLAR 228 (295)
Q Consensus 197 ~~i~~~~~~--~~~~~~~~~i~~~~~~t~~e~~~ 228 (295)
++++.++.+ ....|+.+++.++..++..++++
T Consensus 235 ~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 235 NAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp HHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred HHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence 999999875 33578999999998777666543
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-16 Score=132.38 Aligned_cols=195 Identities=15% Similarity=0.175 Sum_probs=130.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++...+.. .++.. ..++.++.+|++|++++.+++++. ++|+
T Consensus 35 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (276)
T 2b4q_A 35 TGGSRGIGQMIAQGLLEAGARVFICARDAEACADTA-----TRLSA-YGDCQAIPADLSSEAGARRLAQALGELSARLDI 108 (276)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----HHHTT-SSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHh-cCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999875522110 01111 126888999999999988887642 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CC----CcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NL----EQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~----~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+||+||.. ..++.+++++ ++ +. .++|++||...+.... ..
T Consensus 109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~----------~~ 178 (276)
T 2b4q_A 109 LVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG----------EQ 178 (276)
T ss_dssp EEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC----------CS
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC----------CC
Confidence 99999852 2233333333 32 33 7999999988764321 11
Q ss_pred C-ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 K-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~-~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
. .|..+|+..+.+.+ ..++++++++||.+.++.... ...............+ ...+.+++|+|+
T Consensus 179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p-------~~r~~~p~dvA~ 250 (276)
T 2b4q_A 179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIP-------MGRWGRPEEMAA 250 (276)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTST-------TSSCCCHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCC-------CCCcCCHHHHHH
Confidence 2 45699999988763 358999999999998874211 0000111111100111 123578999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+++.++..+ ...|+.+++.++.
T Consensus 251 ~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 251 LAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHhCccccCCCCCEEEeCCCc
Confidence 999998754 3468899998874
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=131.72 Aligned_cols=197 Identities=17% Similarity=0.198 Sum_probs=133.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++++......... ...+.+...++.++.+|++|.+++.+++++. ++|+
T Consensus 19 TGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 94 (256)
T 3ezl_A 19 TGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKW----LEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV 94 (256)
T ss_dssp TTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHH----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999884433311110 1112233457899999999999998888753 7899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ +. +..++|++||...+.... ....|.
T Consensus 95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 164 (256)
T 3ezl_A 95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF----------GQTNYS 164 (256)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS----------CCHHHH
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC----------CCcccH
Confidence 99999862 2233334333 33 667999999987653211 112344
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..++++..++||.+.++..... .......+....+. ..+.+++|+|++++.+
T Consensus 165 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l 234 (256)
T 3ezl_A 165 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI-RPDVLEKIVATIPV---------RRLGSPDEIGSIVAWL 234 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-CHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc-CHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence 99998887653 3689999999999987632111 12222333222221 2346799999999999
Q ss_pred hcCC--CCCCceEEecCCccc
Q 022578 203 LGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~~ 221 (295)
+... ...|+.+++.++..+
T Consensus 235 ~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 235 ASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp HSGGGTTCCSCEEEESTTSCC
T ss_pred hCCcccCCcCcEEEECCCEeC
Confidence 8653 346889999888643
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=133.08 Aligned_cols=198 Identities=16% Similarity=0.140 Sum_probs=132.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccC---CeEEEEecCCChHHHHHhhhcC-----C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~-----~ 72 (295)
|||+|+||.+++++|+++|++|++++|+++...... .++..... ++.++.+|++|++++++++++. .
T Consensus 12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (280)
T 1xkq_A 12 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK 86 (280)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 799999999999999999999999999876532110 01111112 6889999999999988887642 7
Q ss_pred CcEEEEcccCC------------------------hhcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGRE------------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (295)
Q Consensus 73 ~d~vi~~a~~~------------------------~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~ 123 (295)
+|++||+||.. ..++.++++++. ...++|++||...+.... .
T Consensus 87 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~ 157 (280)
T 1xkq_A 87 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ---------P 157 (280)
T ss_dssp CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC---------C
T ss_pred CCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCC---------C
Confidence 99999999852 112334444432 127999999987753210 1
Q ss_pred CCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc--hH------HHHHHHHHcCCCcccCCCCCceee
Q 022578 124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VE------EWFFHRLKAGRPIPIPGSGIQVTQ 188 (295)
Q Consensus 124 ~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~ 188 (295)
....|..+|+..+.+.+ ..|++++.++||.++++..... .. ..+..... ...+ ...
T Consensus 158 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-------~~~ 228 (280)
T 1xkq_A 158 DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK--ECIP-------IGA 228 (280)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT--TTCT-------TSS
T ss_pred cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHH--cCCC-------CCC
Confidence 11234599999887763 3689999999999998732100 00 00111110 1111 124
Q ss_pred eeeHHHHHHHHHHHhcCC---CCCCceEEecCCccc
Q 022578 189 LGHVKDLARAFVQVLGNE---KASRQVFNISGEKYV 221 (295)
Q Consensus 189 ~i~~~D~a~~i~~~~~~~---~~~~~~~~i~~~~~~ 221 (295)
+.+++|+|++++.++..+ ...|+.+++.++..+
T Consensus 229 ~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~ 264 (280)
T 1xkq_A 229 AGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 264 (280)
T ss_dssp CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred CCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence 688999999999998653 346889999888543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-15 Score=127.87 Aligned_cols=195 Identities=13% Similarity=0.049 Sum_probs=131.9
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+ |+||.++++.|+++|++|++++|++.. .+. ..++.....++.++.+|++|++++..+++.. ++
T Consensus 27 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 100 (285)
T 2p91_A 27 TGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKR-----VREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL 100 (285)
T ss_dssp CCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHH-----HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred ECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-HHH-----HHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 7998 999999999999999999999998641 110 0111121234788999999999998887643 78
Q ss_pred cEEEEcccCCh------------------------hcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
|++||+||... .++.++++++. +..++|++||...+.... .
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~ 170 (285)
T 2p91_A 101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP----------H 170 (285)
T ss_dssp CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT----------T
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC----------C
Confidence 99999998532 13444555533 347999999977653211 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|+..+.+.+ ..|+++++++||.++++..... ....+........+. ..+.+++|+|
T Consensus 171 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva 241 (285)
T 2p91_A 171 YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------GKPITIEDVG 241 (285)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence 1235599999887763 3589999999999999864221 112222222222221 1246799999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCcc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
++++.++... ...|+.|++.++..
T Consensus 242 ~~~~~l~s~~~~~~tG~~~~vdgg~~ 267 (285)
T 2p91_A 242 DTAVFLCSDWARAITGEVVHVDNGYH 267 (285)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHcCCcccCCCCCEEEECCCcc
Confidence 9999998653 23578899988743
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.9e-16 Score=129.40 Aligned_cols=197 Identities=14% Similarity=0.097 Sum_probs=133.1
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+ |+||.+++++|+++|++|++++|++ ...+. ..++.....+..++.+|++|++++.+++++. ++
T Consensus 15 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 88 (265)
T 1qsg_A 15 TGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGR-----VEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF 88 (265)
T ss_dssp CCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHH-----HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred ECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHH-----HHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 7999 9999999999999999999999986 21111 0111111234578999999999998887643 78
Q ss_pred cEEEEcccCCh-------------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA-------------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 74 d~vi~~a~~~~-------------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
|++||+||... .++.++++++. ...++|++||...+.... .
T Consensus 89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------~ 158 (265)
T 1qsg_A 89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP----------N 158 (265)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT----------T
T ss_pred CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC----------C
Confidence 99999998532 12344555543 235999999987653211 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|+..+.+.+ ..+++++.++||.++++.... .....+........++ ..+.+++|+|
T Consensus 159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva 229 (265)
T 1qsg_A 159 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDVG 229 (265)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence 1235599999988763 248999999999999985321 1112222333222222 1346799999
Q ss_pred HHHHHHhcCCC--CCCceEEecCCcccC
Q 022578 197 RAFVQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 197 ~~i~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
++++.++.+.. ..|+.+++.++..++
T Consensus 230 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 230 NSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 99999987532 358899999986543
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.3e-16 Score=130.17 Aligned_cols=194 Identities=17% Similarity=0.178 Sum_probs=131.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++++........ ..++.+...++.++.+|++|++++++++++. ++|+
T Consensus 37 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 112 (271)
T 3v2g_A 37 TGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV----VSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI 112 (271)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 799999999999999999999999977754321111 1122333457889999999999998888753 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCCC-ccch
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~~~~ 130 (295)
+||+||.. ..++.+++++ ++...++|++||...... +..+. .|..
T Consensus 113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~----------~~~~~~~Y~a 182 (271)
T 3v2g_A 113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV----------PWPGISLYSA 182 (271)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC----------CSTTCHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC----------CCCCchHHHH
Confidence 99999862 2234444444 345579999998654211 11122 3459
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|+..+.+.+ ..|+++..++||.+.++...... ..........+. ..+..++|+|++++.++
T Consensus 183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~---------~r~~~pedvA~~v~fL~ 251 (271)
T 3v2g_A 183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIAT---------GSYGEPQDIAGLVAWLA 251 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTT---------SSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence 9999887753 35899999999999988542110 011122222221 12467999999999998
Q ss_pred cCC--CCCCceEEecCCc
Q 022578 204 GNE--KASRQVFNISGEK 219 (295)
Q Consensus 204 ~~~--~~~~~~~~i~~~~ 219 (295)
... ...|+.+++.+|.
T Consensus 252 s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 252 GPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp SGGGTTCCSCEEEESTTT
T ss_pred CcccCCccCCEEEeCcCc
Confidence 653 3468899998874
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-16 Score=129.72 Aligned_cols=185 Identities=18% Similarity=0.242 Sum_probs=125.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++... .+..+.+|++|++++.+++++. .+|+
T Consensus 21 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 84 (247)
T 1uzm_A 21 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV 84 (247)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------------HhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876521 1224889999999988887642 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ + +..++|++||...+.... ....|.
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 154 (247)
T 1uzm_A 85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG----------NQANYA 154 (247)
T ss_dssp EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------CCHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC----------CChhHH
Confidence 99999862 22334444443 2 567999999986542211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..++++++++||.+.++.... ............ . + ...+.+++|+|++++.+
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~--~--p-----~~~~~~~~dvA~~~~~l 224 (247)
T 1uzm_A 155 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQF--I--P-----AKRVGTPAEVAGVVSFL 224 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGG--C--T-----TCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cCHHHHHHHHhc--C--C-----CCCCcCHHHHHHHHHHH
Confidence 89998887753 358999999999997762100 001111111111 1 1 12368899999999999
Q ss_pred hcCC--CCCCceEEecCCccc
Q 022578 203 LGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~~ 221 (295)
+..+ ...|+.+++.++..+
T Consensus 225 ~s~~~~~~~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 225 ASEDASYISGAVIPVDGGMGM 245 (247)
T ss_dssp HSGGGTTCCSCEEEESTTTTC
T ss_pred cCccccCCcCCEEEECCCccc
Confidence 8753 246889999887543
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.69 E-value=9e-17 Score=132.80 Aligned_cols=201 Identities=15% Similarity=0.118 Sum_probs=128.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++.+......... ..++.+...++.++.+|++|.+++.+++++. ++|+
T Consensus 14 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 89 (259)
T 3edm_A 14 AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATA----VAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG 89 (259)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHH----HHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999855544311110 1112222357899999999999998888653 7999
Q ss_pred EEEcccCC---------------------hhcHHHHHHhCC----CCCcEEEeeccccc-cCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE---------------------ADEVEPILDALP----NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++. ...++|++||...+ .... ....|.
T Consensus 90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~~Y~ 159 (259)
T 3edm_A 90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGP----------GALAYA 159 (259)
T ss_dssp EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCST----------TCHHHH
T ss_pred EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCC----------CcHHHH
Confidence 99999752 234555666654 33589999998775 2111 112345
Q ss_pred hhhHHHHHHhh----h--cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 130 ~~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
.+|+..+.+.+ + .++++..+.||.+..+.............. ........+.+++|+|++++.++
T Consensus 160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~ 230 (259)
T 3edm_A 160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSLKREGSSEDVAGLVAFLA 230 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHc
Confidence 99999888763 2 238999999999988743211101111111 11122234578999999999998
Q ss_pred cCCC--CCCceEEecCCcccCHH
Q 022578 204 GNEK--ASRQVFNISGEKYVTFD 224 (295)
Q Consensus 204 ~~~~--~~~~~~~i~~~~~~t~~ 224 (295)
.+.. ..|+.|++.|+...+..
T Consensus 231 s~~~~~itG~~i~vdGg~~~~~~ 253 (259)
T 3edm_A 231 SDDAAYVTGACYDINGGVLFSEG 253 (259)
T ss_dssp SGGGTTCCSCEEEESBCSSBC--
T ss_pred CccccCccCCEEEECCCcCCCCC
Confidence 7542 36899999988655443
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.1e-16 Score=129.49 Aligned_cols=197 Identities=16% Similarity=0.104 Sum_probs=131.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+........ ...+.....++.++.+|++|.+++..++++ .++|+
T Consensus 35 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 110 (283)
T 1g0o_A 35 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI 110 (283)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999875411100 011122235788999999999988887764 27999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||+||.. ..++.+++++ +++..++|++||...+.... .....|..+
T Consensus 111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~Y~as 181 (283)
T 1g0o_A 111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV---------PKHAVYSGS 181 (283)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC---------SSCHHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC---------CCCcchHHH
Confidence 99999862 2234444444 33557999999987642210 011234599
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc----------hHHHHHHHHHc--CCCcccCCCCCceeeeeeH
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKA--GRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~ 192 (295)
|+..+.+.+ ..|+++++++||.+.++..... ........+.. ..+ ...+.++
T Consensus 182 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p 252 (283)
T 1g0o_A 182 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP---------LRRVGLP 252 (283)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT---------TCSCBCH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC---------CCCCcCH
Confidence 999887763 3589999999999988621000 00111111111 111 1235789
Q ss_pred HHHHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 193 KDLARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 193 ~D~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+|+|++++.++... ...|+.+++.++.
T Consensus 253 ~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 253 IDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 99999999998753 2468899998874
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-16 Score=129.47 Aligned_cols=184 Identities=14% Similarity=0.163 Sum_probs=123.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|+||++++++|+++|++|++++|+++... + ...+.++ +|+ .++++.+++.. ++|++||+
T Consensus 25 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~-~~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~ 88 (249)
T 1o5i_A 25 LAASRGIGRAVADVLSQEGAEVTICARNEELLK------------R-SGHRYVV-CDL--RKDLDLLFEKVKEVDILVLN 88 (249)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH------------H-TCSEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH------------h-hCCeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence 799999999999999999999999999863311 1 1356677 999 33444444433 89999999
Q ss_pred ccCCh--------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhH
Q 022578 80 NGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL 133 (295)
Q Consensus 80 a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~ 133 (295)
||... .+ ++.+++.+. +..++|++||...+.... ....|..+|.
T Consensus 89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~~sK~ 158 (249)
T 1o5i_A 89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE----------NLYTSNSARM 158 (249)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBHHHHHHHH
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCC----------CCchHHHHHH
Confidence 98621 12 334455554 678999999998864311 1123448999
Q ss_pred HHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHH-HHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 134 ~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
..+.+.+ ..|+++++++||.++++.... ....... ......+ ...+.+++|+|++++.++.+
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~i~~l~s~ 228 (249)
T 1o5i_A 159 ALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIP---------MRRMAKPEEIASVVAFLCSE 228 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCc
Confidence 8887653 368999999999999984210 0001111 1211111 12467899999999999875
Q ss_pred C--CCCCceEEecCCcc
Q 022578 206 E--KASRQVFNISGEKY 220 (295)
Q Consensus 206 ~--~~~~~~~~i~~~~~ 220 (295)
. ...|+.|++.++..
T Consensus 229 ~~~~~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 229 KASYLTGQTIVVDGGLS 245 (249)
T ss_dssp GGTTCCSCEEEESTTCC
T ss_pred cccCCCCCEEEECCCcc
Confidence 3 23588999988753
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=3.1e-16 Score=130.90 Aligned_cols=208 Identities=12% Similarity=0.066 Sum_probs=134.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCC-CCCC-------chhhhhccCCeEEEEecCCChHHHHHhhhc--
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-PGES-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSA-- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~-------~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-- 70 (295)
|||+|.||.+++++|+++|++|++++|......... .... ...+.....++.++.+|++|.+++.+++++
T Consensus 17 TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 96 (277)
T 3tsc_A 17 TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGV 96 (277)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 799999999999999999999999998643210000 0000 011122245789999999999999888874
Q ss_pred ---CCCcEEEEcccCC--------------------hhcHHHHHHh----CC--C-CCcEEEeeccccccCCCCCCCCCC
Q 022578 71 ---KGFDVVYDINGRE--------------------ADEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCET 120 (295)
Q Consensus 71 ---~~~d~vi~~a~~~--------------------~~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~ 120 (295)
..+|++||+||.. ..++.+++++ +. + ..++|++||...+....
T Consensus 97 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 169 (277)
T 3tsc_A 97 AALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP------- 169 (277)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCS-------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCC-------
Confidence 3799999999862 2234444444 22 2 46999999988753211
Q ss_pred CCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCc-ccCCCCCceeeeeeH
Q 022578 121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHV 192 (295)
Q Consensus 121 ~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ 192 (295)
....|..+|+..+.+.+ ..|+++..++||.+.++.................... ...... ....+.++
T Consensus 170 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~r~~~p 245 (277)
T 3tsc_A 170 ---FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF-LPDWVAEP 245 (277)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCS-SSCSCBCH
T ss_pred ---CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhc-cCCCCCCH
Confidence 11234599999887763 3589999999999988743221111112111111111 111111 11247899
Q ss_pred HHHHHHHHHHhcCCC--CCCceEEecCCc
Q 022578 193 KDLARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 193 ~D~a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+|+|++++.++.+.. ..|+.+++.++.
T Consensus 246 edvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 246 EDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 999999999987543 468899998875
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.2e-16 Score=130.64 Aligned_cols=195 Identities=17% Similarity=0.155 Sum_probs=134.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+..... ..++.....++.++.+|++|.+++++++++. ++|+
T Consensus 38 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~ 112 (276)
T 3r1i_A 38 TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVV-----ADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI 112 (276)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1122333457899999999999998888753 8999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCCCCCCCCCc-
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS- 127 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~- 127 (295)
+||+||.. ..++.++++++. + ..++|++||...+.... ..+..
T Consensus 113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~---------~~~~~~ 183 (276)
T 3r1i_A 113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI---------PQQVSH 183 (276)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC---------SSCCHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC---------CCCcch
Confidence 99999862 223444444432 2 36899999977642211 11223
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|+..+.+.+ ..++++..++||.+..+..... ...........+. ..+..++|+|++++
T Consensus 184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~p~---------~r~~~pedvA~~v~ 252 (276)
T 3r1i_A 184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL--ADYHALWEPKIPL---------GRMGRPEELTGLYL 252 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG--GGGHHHHGGGSTT---------SSCBCGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc--hHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence 4599999888763 3689999999999998754211 1112222222111 23567899999999
Q ss_pred HHhcCC--CCCCceEEecCCcc
Q 022578 201 QVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~~ 220 (295)
.++.+. ...|+.+++.++..
T Consensus 253 fL~s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 253 YLASAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp HHHSGGGTTCCSCEEEESTTTT
T ss_pred HHcCccccCccCcEEEECcCcc
Confidence 998753 34688999988753
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-15 Score=127.41 Aligned_cols=195 Identities=9% Similarity=0.040 Sum_probs=134.5
Q ss_pred CCcCCc--chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+ ||.+++++|+++|++|++++|+... +. ..++.+...++.++.+|++|.+++.+++++. .+
T Consensus 32 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 104 (280)
T 3nrc_A 32 TGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK--DR-----VEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL 104 (280)
T ss_dssp CCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH--HH-----HHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred ECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH--HH-----HHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 799977 9999999999999999999998711 00 1122233356899999999999998888753 68
Q ss_pred cEEEEcccCCh-------------------------hcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA-------------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (295)
Q Consensus 74 d~vi~~a~~~~-------------------------~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~ 123 (295)
|++||+||... .++.++++++ . +..++|++||...+....
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 174 (280)
T 3nrc_A 105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP---------- 174 (280)
T ss_dssp CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT----------
T ss_pred CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC----------
Confidence 99999998632 1233344443 3 557999999987653211
Q ss_pred CCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 124 ~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
....|..+|+..+.+.+ ..++++..++||.+.++.... ..............+. ..+.+++|+
T Consensus 175 ~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~pedv 245 (280)
T 3nrc_A 175 SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL---------KKNVDIMEV 245 (280)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------CSCCCHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------CCCCCHHHH
Confidence 11234589999887763 368999999999999875321 1112233333222222 124679999
Q ss_pred HHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 196 ARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 196 a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
|++++.++.+. ...|+.+++.++..+
T Consensus 246 A~~v~~l~s~~~~~~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 246 GNTVAFLCSDMATGITGEVVHVDAGYHC 273 (280)
T ss_dssp HHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHhCcccCCcCCcEEEECCCccc
Confidence 99999998753 356899999998653
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.1e-16 Score=128.46 Aligned_cols=185 Identities=13% Similarity=0.159 Sum_probs=131.9
Q ss_pred CCcCCcchHHHHHHHHH-CCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC---CCcEE
Q 022578 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~---~~d~v 76 (295)
|||+|+||.+++++|++ .|++|++.+|+.... ...+.++.+|++|++++.++++.. ++|++
T Consensus 10 TGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l 74 (244)
T 4e4y_A 10 TGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI 74 (244)
T ss_dssp ETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred eCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence 79999999999999999 789999999886631 146789999999999998888543 78999
Q ss_pred EEcccC--------------------ChhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 77 YDINGR--------------------EADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 77 i~~a~~--------------------~~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
||+||. |..++.++++++. ...++|++||...+.... ....|..+|
T Consensus 75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~~~Y~asK 144 (244)
T 4e4y_A 75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP----------NSFAYTLSK 144 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT----------TBHHHHHHH
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC----------CCchhHHHH
Confidence 999986 2334666777765 225899999988753211 112345999
Q ss_pred HHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHH-----------HHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-----------FFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 133 ~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
+..+.+.+ ..|+++..++||.+.++.... .... ......... ....+.+++|
T Consensus 145 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~d 214 (244)
T 4e4y_A 145 GAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN-LIQKYANNVGISFDEAQKQEEKEF---------PLNRIAQPQE 214 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH-HHHHHHHHHTCCHHHHHHHHHTTS---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH-HHHhhhhhcCCCHHHHHHHHhhcC---------CCCCCcCHHH
Confidence 99988763 468999999999998863110 0000 111111111 1234678999
Q ss_pred HHHHHHHHhcCCC--CCCceEEecCCcc
Q 022578 195 LARAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 195 ~a~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
+|++++.++.+.. ..|+.+++.++..
T Consensus 215 vA~~v~~l~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 215 IAELVIFLLSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhcCccccccCCeEeECCCcc
Confidence 9999999997533 4688999988754
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.2e-16 Score=129.61 Aligned_cols=195 Identities=14% Similarity=0.122 Sum_probs=134.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+....... ...+.....++.++.+|++|.+++.+++++ ..+|+
T Consensus 40 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 114 (279)
T 3ctm_A 40 TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKA-----EHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDV 114 (279)
T ss_dssp TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHH-----HHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999987652111 011122235688999999999999888874 15999
Q ss_pred EEEcccCChh----------------------c----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~~~----------------------~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|||+||.... + ++.+++.++ +.++||++||...+... ...+..
T Consensus 115 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~ 185 (279)
T 3ctm_A 115 FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---------IPQLQA 185 (279)
T ss_dssp EEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------CCHH
T ss_pred EEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC---------CCCCcc
Confidence 9999985311 1 456666665 67899999998764220 011223
Q ss_pred -cchhhHHHHHHhhh-------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 -RHKGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 -~~~~k~~~E~~~~~-------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|+..|.+.+. .+ ++++++||.+.++..... ............+. ..+++++|+|+++
T Consensus 186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p~---------~~~~~~~dvA~~~ 254 (279)
T 3ctm_A 186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SKDMKAKWWQLTPL---------GREGLTQELVGGY 254 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CHHHHHHHHHHSTT---------CSCBCGGGTHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-ChHHHHHHHHhCCc---------cCCcCHHHHHHHH
Confidence 44999999987742 46 899999999988753211 11122222111111 1367899999999
Q ss_pred HHHhcCC--CCCCceEEecCCcc
Q 022578 200 VQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+.++..+ ...|+.+++.++..
T Consensus 255 ~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 255 LYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp HHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHhCccccCccCCEEEECCCee
Confidence 9998763 34688999988753
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-16 Score=129.47 Aligned_cols=185 Identities=15% Similarity=0.206 Sum_probs=126.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+++.. ..+.++.+|++|++++.++++.. .+|+
T Consensus 27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~ 90 (253)
T 2nm0_A 27 TGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV 90 (253)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986552 24788999999999998887642 5899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ +. +..++|++||...+.... ....|.
T Consensus 91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 160 (253)
T 2nm0_A 91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA----------GQANYA 160 (253)
T ss_dssp EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH----------HHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC----------CcHHHH
Confidence 99999862 1233444443 32 567999999987542110 012244
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..++++++++||.+..+.... .............+ ...+++++|+|++++.+
T Consensus 161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~~~~~p~dvA~~i~~l 230 (253)
T 2nm0_A 161 ASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQVP---------LGRYARPEEIAATVRFL 230 (253)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTCT---------TCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHH
Confidence 89998887763 358999999999988764211 00001111111111 12368899999999999
Q ss_pred hcCC--CCCCceEEecCCccc
Q 022578 203 LGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~~ 221 (295)
+.++ ...|+.+.+.++..+
T Consensus 231 ~s~~~~~~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 231 ASDDASYITGAVIPVDGGLGM 251 (253)
T ss_dssp HSGGGTTCCSCEEEESTTTTC
T ss_pred hCccccCCcCcEEEECCcccc
Confidence 8764 246889999887543
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=8.6e-17 Score=133.18 Aligned_cols=192 Identities=18% Similarity=0.239 Sum_probs=132.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++...+.. .+...++.++.+|++|.+++.+++++. .+|+
T Consensus 12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAV--------AALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 799999999999999999999999999876522110 111146889999999999998887742 6899
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||+||.. ..++.++++++. ...++|++||...+ ... ....|..+
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~Y~as 152 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF----------GLAHYAAG 152 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH----------HHHHHHHC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC----------CcHHHHHH
Confidence 99999862 223444444432 24699999998875 210 01224488
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|...+.+.+ ..|+++++++||.+.++..... ............+. ..+.+++|+|++++.++.
T Consensus 153 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~s 222 (263)
T 2a4k_A 153 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-PPWAWEQEVGASPL---------GRAGRPEEVAQAALFLLS 222 (263)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-CHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-CHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhC
Confidence 988776653 3589999999999998743221 12222222222211 135789999999999987
Q ss_pred CC--CCCCceEEecCCccc
Q 022578 205 NE--KASRQVFNISGEKYV 221 (295)
Q Consensus 205 ~~--~~~~~~~~i~~~~~~ 221 (295)
.+ ...|+.+++.++..+
T Consensus 223 ~~~~~~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 223 EESAYITGQALYVDGGRSI 241 (263)
T ss_dssp GGGTTCCSCEEEESTTTTT
T ss_pred ccccCCcCCEEEECCCccc
Confidence 53 246889999888644
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=131.83 Aligned_cols=195 Identities=21% Similarity=0.224 Sum_probs=128.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++..++........ ...+.....++.++.+|++|++++++++++. ++|+
T Consensus 33 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 108 (267)
T 3u5t_A 33 TGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEV----AGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV 108 (267)
T ss_dssp ESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999866554321111 1112233457889999999999998888653 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||+||.. ..++.++++++. ...++|++||...+.... ....|..+
T Consensus 109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~as 178 (267)
T 3u5t_A 109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP----------SYGIYAAA 178 (267)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT----------TCHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC----------CchHHHHH
Confidence 99999862 223444554432 345999999987653221 11235599
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|+..+.+.+ ..|+++..++||.+..+..................+ ...+..++|+|++++.++.
T Consensus 179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s 249 (267)
T 3u5t_A 179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAP---------LERLGTPQDIAGAVAFLAG 249 (267)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSST---------TCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhC
Confidence 999988763 358999999999998874211111111122222211 1245779999999999987
Q ss_pred CCC--CCCceEEecCC
Q 022578 205 NEK--ASRQVFNISGE 218 (295)
Q Consensus 205 ~~~--~~~~~~~i~~~ 218 (295)
... ..|+.+++.+|
T Consensus 250 ~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 250 PDGAWVNGQVLRANGG 265 (267)
T ss_dssp TTTTTCCSEEEEESSS
T ss_pred ccccCccCCEEEeCCC
Confidence 643 36888998876
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.1e-16 Score=128.97 Aligned_cols=188 Identities=18% Similarity=0.244 Sum_probs=127.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|++++.. .+. ++.++.+|+++ +++.++++. .++|+
T Consensus 8 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~ 73 (239)
T 2ekp_A 8 TGGSRGIGRAIAEALVARGYRVAIASRNPEEAA-----------QSL--GAVPLPTDLEK-DDPKGLVKRALEALGGLHV 73 (239)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH-----------HHH--TCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------Hhh--CcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999876511 111 37889999998 766665542 27999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ +. +..++|++||...+.... +.....|.
T Consensus 74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------~~~~~~Y~ 145 (239)
T 2ekp_A 74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--------PVPIPAYT 145 (239)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------TSCCHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--------CCCCccHH
Confidence 99999862 1233334444 33 678999999988764321 01112344
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
.+|...+.+.+ ..|++++++|||.+.++...... ...+........+ ...+.+++|+|++++.
T Consensus 146 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~ 216 (239)
T 2ekp_A 146 TAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP---------MGRWARPEEIARVAAV 216 (239)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence 99999887763 35899999999999887421000 0111222222111 1235789999999999
Q ss_pred HhcCC--CCCCceEEecCCc
Q 022578 202 VLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~ 219 (295)
++.++ ...|+.+++.++.
T Consensus 217 l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 217 LCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp HTSGGGTTCCSCEEEESTTT
T ss_pred HcCchhcCCCCCEEEECCCc
Confidence 98753 2468889998874
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-17 Score=137.36 Aligned_cols=199 Identities=13% Similarity=0.175 Sum_probs=136.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|.||.+++++|+++|++|++++|+.....+.. .++ .....++.++.+|++|.+++++++++. .+|
T Consensus 33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 107 (277)
T 4fc7_A 33 TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAA-----RKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID 107 (277)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999876532111 011 112357899999999999988887653 799
Q ss_pred EEEEcccC--------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGR--------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~--------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||. |..++.++++++ . +..++|++||...+.... ....|
T Consensus 108 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 177 (277)
T 4fc7_A 108 ILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA----------LQVHA 177 (277)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT----------TCHHH
T ss_pred EEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC----------CcHHH
Confidence 99999985 223444455443 2 557999999987653221 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc--hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|+..+.+.+ ..|+++..++||.+.++..... .............++ ..+.+++|+|+++
T Consensus 178 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dvA~~v 248 (277)
T 4fc7_A 178 GSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL---------QRLGNKTEIAHSV 248 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT---------SSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC---------CCCcCHHHHHHHH
Confidence 489999887763 3589999999999998731000 001122222222222 2346799999999
Q ss_pred HHHhcCC--CCCCceEEecCCcccCH
Q 022578 200 VQVLGNE--KASRQVFNISGEKYVTF 223 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~~~t~ 223 (295)
+.++... ...|+.+++.+|..+++
T Consensus 249 ~fL~s~~~~~itG~~i~vdGG~~~~~ 274 (277)
T 4fc7_A 249 LYLASPLASYVTGAVLVADGGAWLTF 274 (277)
T ss_dssp HHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred HHHcCCccCCcCCCEEEECCCcccCC
Confidence 9999753 34689999999865543
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.2e-17 Score=139.10 Aligned_cols=213 Identities=16% Similarity=0.124 Sum_probs=142.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCC-C----CCchhhhhccCCeEEEEecCCChHHHHHhhhcC----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-G----ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~----~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~---- 71 (295)
|||+|+||.+++++|+++|++|++++|+......... . ....++.....++.++.+|++|.+++.+++++.
T Consensus 33 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 112 (322)
T 3qlj_A 33 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETF 112 (322)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 7999999999999999999999999987211000000 0 001112223356889999999999988888653
Q ss_pred -CCcEEEEcccCC--------------------hhcHHHHHHhCC--------C----CCcEEEeeccccccCCCCCCCC
Q 022578 72 -GFDVVYDINGRE--------------------ADEVEPILDALP--------N----LEQFIYCSSAGVYLKSDLLPHC 118 (295)
Q Consensus 72 -~~d~vi~~a~~~--------------------~~~~~~ll~~~~--------~----~~~~i~~Ss~~v~~~~~~~~~~ 118 (295)
.+|++||+||.. ..++.++++++. . ..++|++||...+....
T Consensus 113 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~----- 187 (322)
T 3qlj_A 113 GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV----- 187 (322)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBT-----
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCC-----
Confidence 799999999862 223444444432 1 25999999987653221
Q ss_pred CCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 119 ETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 119 e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
....|..+|+..+.+.+ ..|+++..++|| +..+........ .. ........++.
T Consensus 188 -----~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~-~~------------~~~~~~~~~~~ 248 (322)
T 3qlj_A 188 -----GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE-MM------------ATQDQDFDAMA 248 (322)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------------CCTTC
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh-hh------------hccccccCCCC
Confidence 11235599999888763 368999999999 655432111100 00 01111224467
Q ss_pred HHHHHHHHHHHhcCCC--CCCceEEecCCccc-----------------CHHHHHHHHHHHhCCC
Q 022578 192 VKDLARAFVQVLGNEK--ASRQVFNISGEKYV-----------------TFDGLARACAKVTGLL 237 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~~--~~~~~~~i~~~~~~-----------------t~~e~~~~i~~~~g~~ 237 (295)
++|+|++++.++.... ..|+.+++.++... +..|+++.+.+.++.+
T Consensus 249 pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 249 PENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp GGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 9999999999986533 36889999988654 7799999999999865
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=131.38 Aligned_cols=189 Identities=17% Similarity=0.088 Sum_probs=127.5
Q ss_pred CCcCCcchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCCh-HHHHHhhhcC-----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDY-DFVKSSLSAK----- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~-~~~~~~~~~~----- 71 (295)
|||+|+||.+++++|+++|++ |++++|+..... ..++.+. ..++.++.+|++|+ +++.+++++.
T Consensus 11 tGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~-------~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-------LAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-------HHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred ECCCChHHHHHHHHHHHCCCcEEEEEecCchHHH-------HHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 799999999999999999997 999999864210 0111111 23688999999998 8887777642
Q ss_pred CCcEEEEcccC------------ChhcHHHHHHhCC------C---CCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 72 GFDVVYDINGR------------EADEVEPILDALP------N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 72 ~~d~vi~~a~~------------~~~~~~~ll~~~~------~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
++|+|||+||. |..++.++++++. + ..++|++||...+.... ....|..
T Consensus 84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~~ 153 (254)
T 1sby_A 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH----------QVPVYSA 153 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----------TSHHHHH
T ss_pred CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC----------CchHHHH
Confidence 79999999986 3334555555532 1 46799999988763211 1123459
Q ss_pred hhHHHHHHhhh-------cCCcEEEeccCeeecCCCCC--chH--HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 131 GKLNTESVLES-------KGVNWTSLRPVYIYGPLNYN--PVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 131 ~k~~~E~~~~~-------~~~~~~i~R~~~i~g~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
+|...+.+.+. .++++++++||.+.++.... ... ......... ...+.+++|+|+++
T Consensus 154 sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~dvA~~i 221 (254)
T 1sby_A 154 SKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQNF 221 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh------------cCCCCCHHHHHHHH
Confidence 99999887632 68999999999999873100 000 000000000 01234899999999
Q ss_pred HHHhcCCCCCCceEEecCCc
Q 022578 200 VQVLGNEKASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~~~~~~~~~i~~~~ 219 (295)
+.++.. ...|+.|++.++.
T Consensus 222 ~~~~~~-~~~G~~~~v~gG~ 240 (254)
T 1sby_A 222 VKAIEA-NKNGAIWKLDLGT 240 (254)
T ss_dssp HHHHHH-CCTTCEEEEETTE
T ss_pred HHHHHc-CCCCCEEEEeCCc
Confidence 998874 3458899998873
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-15 Score=127.97 Aligned_cols=197 Identities=12% Similarity=0.057 Sum_probs=135.8
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+| .||.+++++|+++|++|++++|+..... . ...+......+.++.+|++|.+++++++++. ++
T Consensus 36 TGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~-~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (296)
T 3k31_A 36 IGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKK-R-----VDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL 109 (296)
T ss_dssp ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-H-----HHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred EeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHH-H-----HHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 69987 9999999999999999999999854311 0 0111222346789999999999999888753 79
Q ss_pred cEEEEcccCCh------------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .++.++++++. ...++|++||...+.... ..
T Consensus 110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~----------~~ 179 (296)
T 3k31_A 110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP----------HY 179 (296)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT----------TT
T ss_pred CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC----------Cc
Confidence 99999998632 23444555543 445999999987653211 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..++++..++||.+.++...... ............+. ..+..++|+|+
T Consensus 180 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~ 250 (296)
T 3k31_A 180 NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------RRNTTLDDVGG 250 (296)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------SSCCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------CCCCCHHHHHH
Confidence 234599999887763 35899999999999998643221 12222222222222 12456899999
Q ss_pred HHHHHhcCC--CCCCceEEecCCcccC
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
+++.++... ...|+.+++.++..+.
T Consensus 251 ~v~fL~s~~a~~itG~~i~vdGG~~~~ 277 (296)
T 3k31_A 251 AALYLLSDLGRGTTGETVHVDCGYHVV 277 (296)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHcCCccCCccCCEEEECCCcccc
Confidence 999999753 3468999999986543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.4e-16 Score=130.98 Aligned_cols=203 Identities=15% Similarity=0.147 Sum_probs=134.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.....+. ..++.....++.++.+|++|++++.+++++. ++|+
T Consensus 34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (283)
T 3v8b_A 34 TGAGSGIGRATALALAADGVTVGALGRTRTEVEEV-----ADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDI 108 (283)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999987653211 1112222357889999999999998888753 7999
Q ss_pred EEEcccCC---------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE---------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++.++++++ + +..++|++||...+.... ......|
T Consensus 109 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~--------~~~~~~Y 180 (283)
T 3v8b_A 109 VVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFT--------TPGATAY 180 (283)
T ss_dssp EEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC--------STTCHHH
T ss_pred EEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCC--------CCCchHH
Confidence 99999862 22344555554 3 667999999987642110 0111234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCce--eeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV--TQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~D~a~~i 199 (295)
..+|+..+.+.+ ..|+++..++||.+..+......... . .....+.......... ..+..++|+|+++
T Consensus 181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~-~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v 257 (283)
T 3v8b_A 181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH--E-EETAIPVEWPKGQVPITDGQPGRSEDVAELI 257 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC--H-HHHSCCCBCTTCSCGGGTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc--c-hhhhhhhhhhhhcCccccCCCCCHHHHHHHH
Confidence 599999887763 35799999999999987542211000 0 0001111111111111 2457899999999
Q ss_pred HHHhcCC--CCCCceEEecCCc
Q 022578 200 VQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+.++.+. ...|+.+++.+|.
T Consensus 258 ~fL~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 258 RFLVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp HHHTSGGGTTCCSCEEEESTTH
T ss_pred HHHcCccccCCcCCEEEECcCc
Confidence 9998753 2468899998874
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-16 Score=131.45 Aligned_cols=179 Identities=18% Similarity=0.152 Sum_probs=117.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+.+...+. ..+...++.++.+|++|++++.++++.. ++|+
T Consensus 34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 34 TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET--------AAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1222357899999999999998888653 8999
Q ss_pred EEEcccCC---------------------hhcHHHHHHh----CC--C--CCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE---------------------ADEVEPILDA----LP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~----~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
+||+||.. ..++.+++++ +. + ..++|++||...+.... ...
T Consensus 106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~----------~~~ 175 (272)
T 4dyv_A 106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP----------YSA 175 (272)
T ss_dssp EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT----------TCH
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC----------Cch
Confidence 99999862 1233333333 33 2 46999999987653211 112
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.|..+|+..+.+.+ ..++++..++||.+..+.... ...+.... ........+++++|+|+++
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---------~~~~~~~~--~~~~~~~~~~~pedvA~~v 244 (272)
T 4dyv_A 176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK---------MKAGVPQA--DLSIKVEPVMDVAHVASAV 244 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh---------hcccchhh--hhcccccCCCCHHHHHHHH
Confidence 34599999888763 368999999999998873211 10110000 0011223468899999999
Q ss_pred HHHhcCCCC
Q 022578 200 VQVLGNEKA 208 (295)
Q Consensus 200 ~~~~~~~~~ 208 (295)
+.++..+..
T Consensus 245 ~fL~s~~~~ 253 (272)
T 4dyv_A 245 VYMASLPLD 253 (272)
T ss_dssp HHHHHSCTT
T ss_pred HHHhCCCCc
Confidence 999987554
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-15 Score=125.90 Aligned_cols=197 Identities=8% Similarity=0.047 Sum_probs=133.6
Q ss_pred CCcCCc--chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-CCeEEEEecCCChHHHHHhhhcC-----C
Q 022578 1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----G 72 (295)
Q Consensus 1 tGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~-----~ 72 (295)
|||+|+ ||.+++++|+++|++|++++|+..... .. .....+.. .++.++.+|++|++++++++++. .
T Consensus 13 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (266)
T 3oig_A 13 MGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SV----HELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV 87 (266)
T ss_dssp ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HH----HHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HH----HHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 799988 999999999999999999998854311 00 00011111 26899999999999998888753 7
Q ss_pred CcEEEEcccCCh------------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGREA------------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 73 ~d~vi~~a~~~~------------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
+|++||+||... .++.++++++. ...++|++||...+.... .
T Consensus 88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------~ 157 (266)
T 3oig_A 88 IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP----------N 157 (266)
T ss_dssp CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT----------T
T ss_pred eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC----------C
Confidence 899999998532 12344555543 346899999987653211 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|+..+.+.+ ..|+++..++||.+..+..... .............+. ..+.+++|+|
T Consensus 158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~dva 228 (266)
T 3oig_A 158 YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRTTTPEEVG 228 (266)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence 1234499999887753 3589999999999988643221 112233333222221 1346799999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCccc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
++++.++.+. ...|+.+++.+|...
T Consensus 229 ~~v~~l~s~~~~~~tG~~i~vdGG~~~ 255 (266)
T 3oig_A 229 DTAAFLFSDMSRGITGENLHVDSGFHI 255 (266)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHcCCchhcCcCCEEEECCCeEE
Confidence 9999999763 356889999988543
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.4e-16 Score=131.70 Aligned_cols=183 Identities=17% Similarity=0.182 Sum_probs=121.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||.+++++|+++|++|++++|++....... ..+... ...+.++.+|++|++++.++++.. ++
T Consensus 38 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 112 (279)
T 1xg5_A 38 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV 112 (279)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-----HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999865522110 011111 135788999999999988887642 79
Q ss_pred cEEEEcccCC--------------------hhc----HHHHHHhCC--CC--CcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGRE--------------------ADE----VEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~----~~~ll~~~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|+|||+||.. ..+ ++.+++.++ +. .++|++||...+... +..+
T Consensus 113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~ 183 (279)
T 1xg5_A 113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------PLSV 183 (279)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------SCGG
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC---------CCCC
Confidence 9999999852 112 566666665 43 799999998875321 1112
Q ss_pred Cc-cchhhHHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 126 KS-RHKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 126 ~~-~~~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
.. |..+|+..+.+.+ ..++++++++||.+.++.. . ............ ......+++++|+
T Consensus 184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~-----~----~~~~~~~~~~~~-~~~~~~~~~~~dv 253 (279)
T 1xg5_A 184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA-----F----KLHDKDPEKAAA-TYEQMKCLKPEDV 253 (279)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH-----H----HHTTTCHHHHHH-HHC---CBCHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh-----h----hhcccChhHHhh-hcccccCCCHHHH
Confidence 22 4489998887652 4579999999999988721 0 000000000000 0011246789999
Q ss_pred HHHHHHHhcCCC
Q 022578 196 ARAFVQVLGNEK 207 (295)
Q Consensus 196 a~~i~~~~~~~~ 207 (295)
|++++.++..+.
T Consensus 254 A~~i~~l~~~~~ 265 (279)
T 1xg5_A 254 AEAVIYVLSTPA 265 (279)
T ss_dssp HHHHHHHHHSCT
T ss_pred HHHHHHHhcCCc
Confidence 999999998654
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.1e-16 Score=131.51 Aligned_cols=207 Identities=12% Similarity=0.110 Sum_probs=134.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCch-------hhhhccCCeEEEEecCCChHHHHHhhhcC--
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLSAK-- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-- 71 (295)
|||+|+||.++++.|+++|++|++++|............... .+.....++.++.+|++|++++.+++++.
T Consensus 52 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 131 (317)
T 3oec_A 52 TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALA 131 (317)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 799999999999999999999999988754321111111111 11223457899999999999998888653
Q ss_pred ---CCcEEEEcccCC--------------------hhcHHHHHHhC----C---CCCcEEEeeccccccCCCCCCCCCCC
Q 022578 72 ---GFDVVYDINGRE--------------------ADEVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETD 121 (295)
Q Consensus 72 ---~~d~vi~~a~~~--------------------~~~~~~ll~~~----~---~~~~~i~~Ss~~v~~~~~~~~~~e~~ 121 (295)
.+|++||+||.. ..++.++++++ . ...++|++||...+....
T Consensus 132 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~-------- 203 (317)
T 3oec_A 132 EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP-------- 203 (317)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC--------
Confidence 799999999862 22344444443 2 246899999987653211
Q ss_pred CCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcC--CC-----cc-cCCCCCce
Q 022578 122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--RP-----IP-IPGSGIQV 186 (295)
Q Consensus 122 ~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~--~~-----~~-~~~~~~~~ 186 (295)
....|..+|+..+.+.+ ..|+++..++||.+.++..... ......... .+ .. +.......
T Consensus 204 --~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 278 (317)
T 3oec_A 204 --GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE---KLLKMFLPHLENPTREDAAELFSQLTLLP 278 (317)
T ss_dssp --TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH---HHHHHHCTTCSSCCHHHHHHHHTTTCSSS
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch---hhhhhhhhhccccchhHHHHHHhhhccCC
Confidence 11234499999887763 3589999999999988632110 011111000 00 00 00001111
Q ss_pred eeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 187 TQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 187 ~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
..+++++|+|++++.++.+. ...|+.+++.+|..
T Consensus 279 ~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314 (317)
T ss_dssp SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence 46789999999999998653 24689999998864
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.8e-17 Score=133.78 Aligned_cols=202 Identities=14% Similarity=0.117 Sum_probs=134.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcC-CCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-GFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi 77 (295)
|||+|+||.+++++|+++|++|++++|+.+...+.. .++... ...+.++.+|+++.+++.+++++. ++|++|
T Consensus 16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv 90 (267)
T 3t4x_A 16 TGSTAGIGKAIATSLVAEGANVLINGRREENVNETI-----KEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI 90 (267)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 799999999999999999999999999876532111 111111 235788999999999999888765 799999
Q ss_pred EcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 78 DINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 78 ~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
|+||.. ..+ ++.++..+. +..++|++||...+.... ....|..+
T Consensus 91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~as 160 (267)
T 3t4x_A 91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQ----------EMAHYSAT 160 (267)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCT----------TCHHHHHH
T ss_pred ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCC----------cchHHHHH
Confidence 999862 223 333344443 557999999988753211 11234499
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcc----------cCCCCCceeeeeeHHH
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP----------IPGSGIQVTQLGHVKD 194 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~~D 194 (295)
|...+.+.+ ..++++..++||.+.++. ...+......+.... -.........+.+++|
T Consensus 161 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ped 235 (267)
T 3t4x_A 161 KTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG-----VETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEE 235 (267)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH-----HHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc-----HHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHH
Confidence 999888763 247899999999988762 111111100000000 0000011235688999
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCCcccC
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
+|++++.++.+. ...|+.+++.+|...+
T Consensus 236 vA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 236 IAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred HHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 999999998753 3468999999986554
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.4e-16 Score=127.91 Aligned_cols=174 Identities=17% Similarity=0.130 Sum_probs=118.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+....... ..++.+...++.++.+|++|.+++.++++.. .+|+
T Consensus 35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 109 (262)
T 3rkr_A 35 TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAV-----EREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV 109 (262)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999987663211 1122233457899999999999998888742 6999
Q ss_pred EEEcccC---------------------ChhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGR---------------------EADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~---------------------~~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|||+||. |..++.+++++ +. +..+||++||...+.... ....|
T Consensus 110 lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 179 (262)
T 3rkr_A 110 LVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA----------DGAAY 179 (262)
T ss_dssp EEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCT----------TCHHH
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC----------CCchH
Confidence 9999986 12234444444 32 567999999987653211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|+..+.+.+ ..++++..++||.+..+.... ... ......++.++|+|++++.
T Consensus 180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------~~~---------~~~~~~~~~p~dvA~~v~~ 241 (262)
T 3rkr_A 180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG---------LSA---------KKSALGAIEPDDIADVVAL 241 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc---------ccc---------ccccccCCCHHHHHHHHHH
Confidence 599998887753 368999999999987763210 000 0112345789999999999
Q ss_pred HhcCCC
Q 022578 202 VLGNEK 207 (295)
Q Consensus 202 ~~~~~~ 207 (295)
++....
T Consensus 242 l~s~~~ 247 (262)
T 3rkr_A 242 LATQAD 247 (262)
T ss_dssp HHTCCT
T ss_pred HhcCcc
Confidence 988643
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.66 E-value=4e-16 Score=130.48 Aligned_cols=195 Identities=17% Similarity=0.180 Sum_probs=134.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----CCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v 76 (295)
|||+|.||.+++++|+++|++|++++|+.+..... ..+...++.++.+|++|.+++.++++. .++|++
T Consensus 36 TGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 36 SGGAGGLGEATVRRLHADGLGVVIADLAAEKGKAL--------ADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHH--------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 79999999999999999999999999987653211 122235799999999999999888864 278999
Q ss_pred EEc-ccCC-------------------------hhcHHHHHHhCC------------CCCcEEEeeccccccCCCCCCCC
Q 022578 77 YDI-NGRE-------------------------ADEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHC 118 (295)
Q Consensus 77 i~~-a~~~-------------------------~~~~~~ll~~~~------------~~~~~i~~Ss~~v~~~~~~~~~~ 118 (295)
||+ ++.. ..++.++++++. +..++|++||...+....
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 182 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI----- 182 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT-----
T ss_pred EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC-----
Confidence 999 4431 112333444321 345899999988753211
Q ss_pred CCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 119 ETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 119 e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
....|..+|+..+.+.+ ..++++..++||.+..+.... .............+. . ..+.+
T Consensus 183 -----~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--~------~~~~~ 248 (281)
T 3ppi_A 183 -----GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPF--P------KRLGT 248 (281)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCS--S------SSCBC
T ss_pred -----CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCC--C------CCCCC
Confidence 11234599998887653 358999999999998763111 111222222222221 0 24578
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEecCCcccC
Q 022578 192 VKDLARAFVQVLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t 222 (295)
++|+|++++.++.+....|+.+++.++..++
T Consensus 249 pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 249 PDEFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp HHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred HHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 9999999999998876789999999987654
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-15 Score=128.05 Aligned_cols=196 Identities=10% Similarity=0.063 Sum_probs=132.4
Q ss_pred CCcCCc--chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+ ||.+++++|+++|++|++++|+..... . ...+.+...++.++.+|++|.+++.++++.. .+
T Consensus 37 TGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (293)
T 3grk_A 37 LGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-R-----VEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL 110 (293)
T ss_dssp ECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-H-----HHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred EcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-H-----HHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 799988 999999999999999999998853211 0 0112222356889999999999998888753 79
Q ss_pred cEEEEcccCCh------------------------hcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .++.+++++ ++...++|++||...+.... ..
T Consensus 111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------~~ 180 (293)
T 3grk_A 111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP----------NY 180 (293)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT----------TT
T ss_pred CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC----------ch
Confidence 99999998632 123334444 33456999999988753211 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..|+++..++||.+.++.... ..............+. ..+..++|+|+
T Consensus 181 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~ 251 (293)
T 3grk_A 181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------RRTVTIDEVGD 251 (293)
T ss_dssp THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------SSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------CCCCCHHHHHH
Confidence 234599999887763 358999999999999874321 1112222222222222 12456999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCccc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
+++.++... ...|+.+++.++..+
T Consensus 252 ~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (293)
T 3grk_A 252 VGLYFLSDLSRSVTGEVHHADSGYHV 277 (293)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHcCccccCCcceEEEECCCccc
Confidence 999998753 346899999998654
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.7e-16 Score=130.95 Aligned_cols=176 Identities=15% Similarity=0.054 Sum_probs=122.7
Q ss_pred CCcCCcchHHHHHHHHH-CCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||++++++|++ .|++|++++|+.+...... ..+.....++.++.+|++|.+++..++++. ++|
T Consensus 10 TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 84 (276)
T 1wma_A 10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD 84 (276)
T ss_dssp SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 79999999999999999 9999999999865422110 111222356889999999999998888753 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCC-C----------CCCCCC
Q 022578 75 VVYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKS-D----------LLPHCE 119 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~-~----------~~~~~e 119 (295)
+|||+||.. ..++.++++++. ...++|++||...+... . ..+++|
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e 164 (276)
T 1wma_A 85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE 164 (276)
T ss_dssp EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence 999999862 223555666654 23599999998776321 0 011111
Q ss_pred CC-------------------CCCCCc-cchhhHHHHHHhh-------h----cCCcEEEeccCeeecCCCCCchHHHHH
Q 022578 120 TD-------------------TVDPKS-RHKGKLNTESVLE-------S----KGVNWTSLRPVYIYGPLNYNPVEEWFF 168 (295)
Q Consensus 120 ~~-------------------~~~p~~-~~~~k~~~E~~~~-------~----~~~~~~i~R~~~i~g~~~~~~~~~~~~ 168 (295)
++ +..|.. |..+|+..|.+.+ . .+++++.++||.+.++....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~------- 237 (276)
T 1wma_A 165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------- 237 (276)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------
T ss_pred hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-------
Confidence 11 112323 4599998887763 2 48999999999988763211
Q ss_pred HHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
..+.+++|+|++++.++..+
T Consensus 238 ------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 ------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp ------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred ------------------cccCChhHhhhhHhhhhcCc
Confidence 13578999999999999754
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.7e-16 Score=127.44 Aligned_cols=181 Identities=15% Similarity=0.088 Sum_probs=115.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC----CCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~v 76 (295)
|||+|+||.+++++|+++|++|++++|+.+..... ..++.+...++.++.+|++|.+++.++++.. ++|++
T Consensus 13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~l 87 (252)
T 3h7a_A 13 IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPL-----VAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVT 87 (252)
T ss_dssp ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH-----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEE
Confidence 79999999999999999999999999987663221 1122222457899999999999999888753 78999
Q ss_pred EEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 77 YDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 77 i~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
||+||.. ..++.+++++ ++ +..++|++||...+.... ....|..
T Consensus 88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~a 157 (252)
T 3h7a_A 88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGS----------GFAAFAS 157 (252)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCT----------TCHHHHH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCC----------CCccHHH
Confidence 9999962 2234444444 33 567999999987653211 1123459
Q ss_pred hhHHHHHHhh-------hcCCcE-EEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 131 GKLNTESVLE-------SKGVNW-TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~-~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
+|+..+.+.+ ..|+++ ..+.||.+..+...... ..... ......... +.+++|+|++++.+
T Consensus 158 sKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~-~~~~~---------~~~~~~~~~-~~~pedvA~~~~~l 226 (252)
T 3h7a_A 158 AKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR-EQMFG---------KDALANPDL-LMPPAAVAGAYWQL 226 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc-hhhhh---------hhhhcCCcc-CCCHHHHHHHHHHH
Confidence 9998887753 358899 89999998876321110 00000 001111122 78999999999999
Q ss_pred hcCCC
Q 022578 203 LGNEK 207 (295)
Q Consensus 203 ~~~~~ 207 (295)
+.++.
T Consensus 227 ~s~~~ 231 (252)
T 3h7a_A 227 YQQPK 231 (252)
T ss_dssp HHCCG
T ss_pred HhCch
Confidence 98654
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.7e-16 Score=130.39 Aligned_cols=207 Identities=16% Similarity=0.141 Sum_probs=134.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCC----CCCCc-------hhhhhccCCeEEEEecCCChHHHHHhhh
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL----PGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLS 69 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 69 (295)
|||+|.||.+++++|+++|++|++++|+........ ..... ..+.....++.++.+|++|++++.++++
T Consensus 17 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 96 (286)
T 3uve_A 17 TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVD 96 (286)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred eCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence 799999999999999999999999999854311100 00000 1112223578999999999999988876
Q ss_pred cC-----CCcEEEEcccCC---------------------hhcHHHHHHhC----C--C-CCcEEEeeccccccCCCCCC
Q 022578 70 AK-----GFDVVYDINGRE---------------------ADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLP 116 (295)
Q Consensus 70 ~~-----~~d~vi~~a~~~---------------------~~~~~~ll~~~----~--~-~~~~i~~Ss~~v~~~~~~~~ 116 (295)
+. .+|++||+||.. ..++.++++++ . + ..++|++||...+....
T Consensus 97 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 173 (286)
T 3uve_A 97 SGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYP--- 173 (286)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---
T ss_pred HHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCC---
Confidence 42 799999999862 22334444443 2 2 46899999988753211
Q ss_pred CCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcC---CCc----c--cC
Q 022578 117 HCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RPI----P--IP 180 (295)
Q Consensus 117 ~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~---~~~----~--~~ 180 (295)
....|..+|+..+.+.+ ..|+++..++||.+..+....... ....... ... . ..
T Consensus 174 -------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 243 (286)
T 3uve_A 174 -------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGT---FKMFRPDLENPGPDDMAPICQM 243 (286)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHHHHHT
T ss_pred -------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccch---hhhccccccccchhhHHHHHHh
Confidence 11234599998887763 368999999999999885432110 0111000 000 0 00
Q ss_pred CCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 181 GSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 181 ~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
... ....+.+++|+|++++.++.+. ...|+.+++.+|..+
T Consensus 244 ~~~-~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 244 FHT-LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp TCS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhc-cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 111 1145678999999999998753 346899999998644
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-15 Score=123.76 Aligned_cols=190 Identities=14% Similarity=0.103 Sum_probs=123.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++..... ..+...++.++.+|++|++++.+++++. ++|+
T Consensus 6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQEL--------KDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 79999999999999999999999999986552211 0111246889999999999999988753 7899
Q ss_pred EEEcccCC---------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE---------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++.+++++ +. +..++|++||...+.... ....|
T Consensus 78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~Y 147 (248)
T 3asu_A 78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA----------GGNVY 147 (248)
T ss_dssp EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT----------TCHHH
T ss_pred EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCC----------CCchH
Confidence 99999853 1123333333 32 668999999987653211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeee-cCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|+..+.+.+ ..|++++.++||.+. .+...... ... ........ ....+++++|+|++++
T Consensus 148 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~----~~~--~~~~~~~~----~~~~~~~p~dvA~~v~ 217 (248)
T 3asu_A 148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF----KGD--DGKAEKTY----QNTVALTPEDVSEAVW 217 (248)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC--------------------------------CCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcc----cCc--hHHHHHHH----hccCCCCHHHHHHHHH
Confidence 599999988763 358999999999998 45321000 000 00000000 0113468999999999
Q ss_pred HHhcCCC-CCCceEEecCC
Q 022578 201 QVLGNEK-ASRQVFNISGE 218 (295)
Q Consensus 201 ~~~~~~~-~~~~~~~i~~~ 218 (295)
.++.++. ..+..+.+...
T Consensus 218 ~l~s~~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 218 WVSTLPAHVNINTLEMMPV 236 (248)
T ss_dssp HHHHSCTTCCCCEEEECCT
T ss_pred HHhcCCccceeeEEEEccc
Confidence 9987643 35666666543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-16 Score=130.90 Aligned_cols=189 Identities=13% Similarity=0.091 Sum_probs=131.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.+...+. ..+...++.++.+|++|++++.+++++. ++|+
T Consensus 12 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 12 TGAAQGIGKAIAARLAADGATVIVSDINAEGAKAA--------AASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 79999999999999999999999999987653211 1222357899999999999998888653 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++.+++++ ++ + ..++|++||...+.... ....|
T Consensus 84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 153 (247)
T 3rwb_A 84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP----------NMAAY 153 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT----------TCHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC----------Cchhh
Confidence 99999862 2234444444 43 3 57999999987654321 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC---chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..+|...+.+.+ ..|+++..++||.+..+.... .....+... ..+ ...+..++|+|++
T Consensus 154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~---~~~---------~~r~~~pedva~~ 221 (247)
T 3rwb_A 154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEM---LQA---------MKGKGQPEHIADV 221 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHH---HSS---------SCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhc---ccc---------cCCCcCHHHHHHH
Confidence 599988887653 368999999999998763110 000011110 011 1234679999999
Q ss_pred HHHHhcCC--CCCCceEEecCCc
Q 022578 199 FVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++.++.+. ...|+.+++.++.
T Consensus 222 v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 222 VSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHhCccccCCCCCEEEECCCc
Confidence 99998764 2468899998874
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.8e-15 Score=126.41 Aligned_cols=210 Identities=12% Similarity=0.145 Sum_probs=134.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCC-------chhhhhccCCeEEEEecCCChHHHHHhhhc---
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSA--- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--- 70 (295)
|||+|.||.+++++|+++|++|++++|++......+.... ..++.....++.++.+|++|.+++.+++++
T Consensus 34 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 113 (299)
T 3t7c_A 34 TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVT 113 (299)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 7999999999999999999999999998543111111000 111223346789999999999998888764
Q ss_pred --CCCcEEEEcccCC---------------------hhcHHHHHHhC----C---CCCcEEEeeccccccCCCCCCCCCC
Q 022578 71 --KGFDVVYDINGRE---------------------ADEVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCET 120 (295)
Q Consensus 71 --~~~d~vi~~a~~~---------------------~~~~~~ll~~~----~---~~~~~i~~Ss~~v~~~~~~~~~~e~ 120 (295)
..+|++||+||.. ..++.++++++ . +..++|++||...+....
T Consensus 114 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------- 186 (299)
T 3t7c_A 114 QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAE------- 186 (299)
T ss_dssp HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCT-------
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC-------
Confidence 2799999999852 22333444442 2 356999999987653211
Q ss_pred CCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcc------cCCCCCcee
Q 022578 121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP------IPGSGIQVT 187 (295)
Q Consensus 121 ~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 187 (295)
....|..+|+..+.+.+ ..|+++..++||.+.++..........+.......... ..... ...
T Consensus 187 ---~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~ 262 (299)
T 3t7c_A 187 ---NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV-LPI 262 (299)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS-SSC
T ss_pred ---CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc-cCc
Confidence 11234599999887763 35899999999999988543211100000000000000 00000 012
Q ss_pred eeeeHHHHHHHHHHHhcCCC--CCCceEEecCCccc
Q 022578 188 QLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV 221 (295)
Q Consensus 188 ~~i~~~D~a~~i~~~~~~~~--~~~~~~~i~~~~~~ 221 (295)
.+..++|+|++++.++.+.. ..|+.+++.+|..+
T Consensus 263 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 263 PYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 46789999999999987542 46899999998643
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.5e-16 Score=125.18 Aligned_cols=178 Identities=16% Similarity=0.131 Sum_probs=127.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||+|+||.+++++|+++|++|++++|+.. +|++|++++++++++. ++|++||+
T Consensus 12 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------~D~~~~~~v~~~~~~~g~id~lv~n 66 (223)
T 3uce_A 12 LGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------LDISDEKSVYHYFETIGAFDHLIVT 66 (223)
T ss_dssp ETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence 799999999999999999999999987633 6999999999888753 78999999
Q ss_pred ccCC---------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHH
Q 022578 80 NGRE---------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN 134 (295)
Q Consensus 80 a~~~---------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~ 134 (295)
||.. ..++.++++++. ...++|++||...+.... ....|..+|..
T Consensus 67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~~~Y~asK~a 136 (223)
T 3uce_A 67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA----------NTYVKAAINAA 136 (223)
T ss_dssp CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT----------TCHHHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC----------CchHHHHHHHH
Confidence 9863 223455555543 335899999988753211 11234599999
Q ss_pred HHHHhh----hc-CCcEEEeccCeeecCCCCCch---HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 135 TESVLE----SK-GVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 135 ~E~~~~----~~-~~~~~i~R~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
.+.+.+ +. .+++..++||.+.++...... ...+........+. ..+.+++|+|++++.++...
T Consensus 137 ~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~l~~~~ 207 (223)
T 3uce_A 137 IEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAMAYLFAIQNS 207 (223)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHHHHHHHccCC
Confidence 888763 22 289999999999987432211 11122222222221 23567999999999999876
Q ss_pred CCCCceEEecCCcccC
Q 022578 207 KASRQVFNISGEKYVT 222 (295)
Q Consensus 207 ~~~~~~~~i~~~~~~t 222 (295)
...|+.+++.++..++
T Consensus 208 ~~tG~~i~vdgG~~~s 223 (223)
T 3uce_A 208 YMTGTVIDVDGGALLG 223 (223)
T ss_dssp TCCSCEEEESTTGGGC
T ss_pred CCCCcEEEecCCeecC
Confidence 6689999999986543
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.64 E-value=9.3e-16 Score=126.90 Aligned_cols=182 Identities=19% Similarity=0.140 Sum_probs=118.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.+...+. ..++.....++.++.+|++|.+++..++++. .+|+
T Consensus 10 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 84 (264)
T 3tfo_A 10 TGASGGIGEGIARELGVAGAKILLGARRQARIEAI-----ATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV 84 (264)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987653211 1112222357889999999999988887653 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.+++++ +. +..++|++||...+.... ....|.
T Consensus 85 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~----------~~~~Y~ 154 (264)
T 3tfo_A 85 LVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVP----------TAAVYC 154 (264)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT----------TCHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCC----------CChhHH
Confidence 99999862 2233333333 33 667999999988753211 112345
Q ss_pred hhhHHHHHHhh----h-cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 130 KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 130 ~~k~~~E~~~~----~-~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
.+|+..+.+.+ + .++++..++||.+..+.... + ........... ....+..++|+|++++.++.
T Consensus 155 asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~-----~----~~~~~~~~~~~--~~~~~~~pedvA~~v~~l~s 223 (264)
T 3tfo_A 155 ATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT-----I----THEETMAAMDT--YRAIALQPADIARAVRQVIE 223 (264)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc-----c----cchhHHHHHHh--hhccCCCHHHHHHHHHHHhc
Confidence 99998887753 2 38999999999988763211 0 00000000000 11124689999999999998
Q ss_pred CCCC
Q 022578 205 NEKA 208 (295)
Q Consensus 205 ~~~~ 208 (295)
.+..
T Consensus 224 ~~~~ 227 (264)
T 3tfo_A 224 APQS 227 (264)
T ss_dssp SCTT
T ss_pred CCcc
Confidence 7653
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.2e-16 Score=129.27 Aligned_cols=193 Identities=12% Similarity=0.098 Sum_probs=131.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC----CCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~v 76 (295)
|||+|.||.+++++|+++|++|++++|+++..... ..++.+...++.++.+|++|.+++..+++.. .+|++
T Consensus 39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~l 113 (275)
T 4imr_A 39 TGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAV-----QQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDIL 113 (275)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHH-----HHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEE
Confidence 79999999999999999999999999987663221 1122233467899999999998888777642 79999
Q ss_pred EEcccC--------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cc
Q 022578 77 YDINGR--------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RH 129 (295)
Q Consensus 77 i~~a~~--------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~ 129 (295)
||+||. |..++.++++++ . +..++|++||...+.. ..+.. |.
T Consensus 114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y~ 182 (275)
T 4imr_A 114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP-----------KSVVTAYA 182 (275)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCCchhhH
Confidence 999986 222344455543 3 6679999999886531 11222 45
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch--HHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.+|+..+.+.+ ..++++..++||.+..+...... ............ ++ ..+..++|+|+++
T Consensus 183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v 253 (275)
T 4imr_A 183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GRAGRPEEMVGAA 253 (275)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CSCBCGGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CCCcCHHHHHHHH
Confidence 99999887763 35899999999999876210000 001111111111 11 1245689999999
Q ss_pred HHHhcCC--CCCCceEEecCC
Q 022578 200 VQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~ 218 (295)
+.++.+. ...|+.+++.+|
T Consensus 254 ~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 254 LFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp HHHHSGGGTTCCSCEEEESSC
T ss_pred HHHcCcccCCCCCCEEEeCCC
Confidence 9998753 246889998876
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.9e-16 Score=131.70 Aligned_cols=191 Identities=11% Similarity=0.094 Sum_probs=118.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccC--CeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS--KILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|+||.+++++|+++|++|++++|+.++..... ..+..... ++.++.+|++|.+++..+++.. .+
T Consensus 14 TGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (319)
T 3ioy_A 14 TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKAL-----ATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV 88 (319)
T ss_dssp ETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred cCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999976632211 11111122 7899999999999998888642 78
Q ss_pred cEEEEcccC--------------------ChhcHHHHHHhCC------------CCCcEEEeeccccccCCCCCCCCCCC
Q 022578 74 DVVYDINGR--------------------EADEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHCETD 121 (295)
Q Consensus 74 d~vi~~a~~--------------------~~~~~~~ll~~~~------------~~~~~i~~Ss~~v~~~~~~~~~~e~~ 121 (295)
|+|||+||. |..++.++++++. +..++|++||...+....
T Consensus 89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~-------- 160 (319)
T 3ioy_A 89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG-------- 160 (319)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS--------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC--------
Confidence 999999995 2234555555432 256899999988764321
Q ss_pred CCCCCccchhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCC-CcccCCCCCceeeeeeH
Q 022578 122 TVDPKSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGR-PIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 122 ~~~p~~~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~ 192 (295)
....|..+|...+.+. ...|+++++++||.+.++..... .....+....... ...+..-.......+++
T Consensus 161 --~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 238 (319)
T 3ioy_A 161 --SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEP 238 (319)
T ss_dssp --SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCH
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCH
Confidence 1123559999655543 34689999999999988743211 1111110000000 00000000111122789
Q ss_pred HHHHHHHHHHhcCC
Q 022578 193 KDLARAFVQVLGNE 206 (295)
Q Consensus 193 ~D~a~~i~~~~~~~ 206 (295)
+|+|+.++.++..+
T Consensus 239 e~vA~~~~~al~~~ 252 (319)
T 3ioy_A 239 DVIGARVIEAMKAN 252 (319)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999875
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.8e-15 Score=123.56 Aligned_cols=178 Identities=17% Similarity=0.163 Sum_probs=125.4
Q ss_pred CCcCCcchHHHHHHHHHCC---CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC------
Q 022578 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------ 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~------ 71 (295)
|||+|+||++++++|+++| ++|++++|+...... ..++.....++.++.+|++|.+++.++++..
T Consensus 27 TGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~------~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 100 (267)
T 1sny_A 27 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE------LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 100 (267)
T ss_dssp SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH------HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred ECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH------HHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 7999999999999999999 999999998765221 0112222357999999999999998888643
Q ss_pred -CCcEEEEcccCCh---------------------hcHHHHHHhCC-----C------------CCcEEEeeccccccCC
Q 022578 72 -GFDVVYDINGREA---------------------DEVEPILDALP-----N------------LEQFIYCSSAGVYLKS 112 (295)
Q Consensus 72 -~~d~vi~~a~~~~---------------------~~~~~ll~~~~-----~------------~~~~i~~Ss~~v~~~~ 112 (295)
++|+|||+||... .++.++++++. . ..+||++||...+...
T Consensus 101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 180 (267)
T 1sny_A 101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 180 (267)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence 6999999998532 23444444432 1 4789999998876432
Q ss_pred CCCCCCCCCCCCCC-ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCC
Q 022578 113 DLLPHCETDTVDPK-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 184 (295)
Q Consensus 113 ~~~~~~e~~~~~p~-~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (295)
. +..+. .|..+|+..+.+.+ ..+++++++|||.+..+....
T Consensus 181 ~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------- 229 (267)
T 1sny_A 181 N--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------------- 229 (267)
T ss_dssp C--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------
T ss_pred C--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------
Confidence 1 11122 34599999988763 258999999999987763210
Q ss_pred ceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecC
Q 022578 185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNISG 217 (295)
Q Consensus 185 ~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~ 217 (295)
..+++++|+|+.++.++... ...|..+.+.+
T Consensus 230 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g 262 (267)
T 1sny_A 230 --SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDG 262 (267)
T ss_dssp --TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTS
T ss_pred --CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCC
Confidence 02467899999999998753 23455555544
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=5.7e-16 Score=126.22 Aligned_cols=175 Identities=12% Similarity=0.097 Sum_probs=122.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-------CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~~~ 73 (295)
|||+|+||++++++|+++|++|++++|++.... ....++.+|++|++++.++++. .++
T Consensus 9 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i 73 (236)
T 1ooe_A 9 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV 73 (236)
T ss_dssp ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 799999999999999999999999999876521 2356788999999888877753 289
Q ss_pred cEEEEcccCC---------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCc-
Q 022578 74 DVVYDINGRE---------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS- 127 (295)
Q Consensus 74 d~vi~~a~~~---------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~- 127 (295)
|+|||+||.. ..++.++++++. ...++|++||...+.. ..+..
T Consensus 74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~ 142 (236)
T 1ooe_A 74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----------TPSMIG 142 (236)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-----------CCCcHH
Confidence 9999999852 112333444432 3359999999887532 11222
Q ss_pred cchhhHHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 128 RHKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 128 ~~~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
|..+|...+.+.+ ..+++++.++||.+.++. ........ ....+++++|+|++
T Consensus 143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~---------~~~~~~~~---------~~~~~~~~~dvA~~ 204 (236)
T 1ooe_A 143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---------NRKWMPNA---------DHSSWTPLSFISEH 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---------HHHHSTTC---------CGGGCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc---------hhhcCCCc---------cccccCCHHHHHHH
Confidence 4489999887763 345999999999988761 11111111 11235678999999
Q ss_pred HHHHhcC---CCCCCceEEecCCc
Q 022578 199 FVQVLGN---EKASRQVFNISGEK 219 (295)
Q Consensus 199 i~~~~~~---~~~~~~~~~i~~~~ 219 (295)
++.++.. ....|+.+++.++.
T Consensus 205 i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 205 LLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred HHHHHcCCCcccccccEEEEecCC
Confidence 9977633 22357888887764
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-15 Score=123.46 Aligned_cols=186 Identities=18% Similarity=0.103 Sum_probs=126.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hccCCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||.+++++|+++|++|++++|+.++..... .++. ....++.++.+|++|++++.+++++. ++|
T Consensus 8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 82 (235)
T 3l77_A 8 TGASRGIGEAIARALARDGYALALGARSVDRLEKIA-----HELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVD 82 (235)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCS
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999999999999876532111 0111 22357899999999999999888753 799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
++||+||.. ..++.++++++ + +..++|++||...+... .....|.
T Consensus 83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~----------~~~~~Y~ 152 (235)
T 3l77_A 83 VVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI----------PYGGGYV 152 (235)
T ss_dssp EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC----------TTCHHHH
T ss_pred EEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC----------CCcchHH
Confidence 999999862 22344455553 3 45677877776543211 1112355
Q ss_pred hhhHHHHHHhhh-----cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 130 KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 130 ~~k~~~E~~~~~-----~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
.+|+..+.+.+. .++++..++||.+..+.... . .. ......++.++|+|++++.++.
T Consensus 153 ~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~---------------~--~~-~~~~~~~~~p~dva~~v~~l~~ 214 (235)
T 3l77_A 153 STKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS---------------K--PG-KPKEKGYLKPDEIAEAVRCLLK 214 (235)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC---------------C--SC-CCGGGTCBCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc---------------c--CC-cccccCCCCHHHHHHHHHHHHc
Confidence 999999887643 58999999999987763211 0 00 1111256789999999999998
Q ss_pred CCCC--CCceEEecCCc
Q 022578 205 NEKA--SRQVFNISGEK 219 (295)
Q Consensus 205 ~~~~--~~~~~~i~~~~ 219 (295)
++.. .++.+...+++
T Consensus 215 ~~~~~~~~~~~~~~~~~ 231 (235)
T 3l77_A 215 LPKDVRVEELMLRSVYQ 231 (235)
T ss_dssp SCTTCCCCEEEECCTTS
T ss_pred CCCCCccceEEEeeccc
Confidence 7543 45555554444
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.9e-15 Score=118.24 Aligned_cols=189 Identities=16% Similarity=0.168 Sum_probs=132.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||++-||..+++.|+++|++|.+.+|+.+...+.. ..++..+.+|++|+++++++++++ ++|++||+
T Consensus 17 TGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNN 85 (242)
T 4b79_A 17 TGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFEALPRLDVLVNN 85 (242)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 799999999999999999999999999987744322 257899999999999999988765 78999999
Q ss_pred ccCC------------------hhcH----HHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHH
Q 022578 80 NGRE------------------ADEV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTE 136 (295)
Q Consensus 80 a~~~------------------~~~~----~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E 136 (295)
||.. ..++ +..+..++ +..++|++||...+.... ....|..+|....
T Consensus 86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~----------~~~~Y~asKaav~ 155 (242)
T 4b79_A 86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSA----------DRPAYSASKGAIV 155 (242)
T ss_dssp CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCS----------SCHHHHHHHHHHH
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCC----------CCHHHHHHHHHHH
Confidence 9973 2222 22333343 447999999987542211 1123459999887
Q ss_pred HHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--
Q 022578 137 SVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-- 206 (295)
Q Consensus 137 ~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~-- 206 (295)
.+.+ .+|+++..+.||.+..|-... ..-....+.+.+..|+. -+..++|+|++++.++.+.
T Consensus 156 ~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~v~fLaSd~a~ 226 (242)
T 4b79_A 156 QLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA---------RWGEAPEVASAAAFLCGPGAS 226 (242)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC---------SCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhc
Confidence 7653 578999999999998874211 11122233333433332 2355899999999998653
Q ss_pred CCCCceEEecCCc
Q 022578 207 KASRQVFNISGEK 219 (295)
Q Consensus 207 ~~~~~~~~i~~~~ 219 (295)
...|+.+.+.+|-
T Consensus 227 ~iTG~~l~VDGG~ 239 (242)
T 4b79_A 227 FVTGAVLAVDGGY 239 (242)
T ss_dssp TCCSCEEEESTTG
T ss_pred CccCceEEECccH
Confidence 2468899998874
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.5e-17 Score=133.17 Aligned_cols=202 Identities=11% Similarity=0.098 Sum_probs=127.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|......... ....++.....++.++.+|++|.+++.+++++. ++|+
T Consensus 17 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 94 (262)
T 3ksu_A 17 AGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTAN--KLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDI 94 (262)
T ss_dssp ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHH--HHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHH--HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999988643311000 001112222357889999999999998888642 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||+||.. ..++.++++++. +..++|++||...+..... ...|..+
T Consensus 95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~----------~~~Y~as 164 (262)
T 3ksu_A 95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF----------YSTYAGN 164 (262)
T ss_dssp EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC----------CCC----
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC----------CchhHHH
Confidence 99999962 234445555543 4468999999877643221 1235588
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|+..+.+.+ ..++++..++||.+..+...... ................+.+++|+|++++.++.
T Consensus 165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s 235 (262)
T 3ksu_A 165 KAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE---------TKESTAFHKSQAMGNQLTKIEDIAPIIKFLTT 235 (262)
T ss_dssp -CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------------CCCCSCCGGGTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---------chHHHHHHHhcCcccCCCCHHHHHHHHHHHcC
Confidence 998887763 35899999999998765210000 00000000111122345778999999999987
Q ss_pred CC-CCCCceEEecCCcccCH
Q 022578 205 NE-KASRQVFNISGEKYVTF 223 (295)
Q Consensus 205 ~~-~~~~~~~~i~~~~~~t~ 223 (295)
+. ...|+.+++.|+.....
T Consensus 236 ~~~~itG~~i~vdGg~~~~~ 255 (262)
T 3ksu_A 236 DGWWINGQTIFANGGYTTRE 255 (262)
T ss_dssp TTTTCCSCEEEESTTCCCC-
T ss_pred CCCCccCCEEEECCCccCCC
Confidence 62 24688999998865444
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.9e-15 Score=121.55 Aligned_cols=197 Identities=17% Similarity=0.204 Sum_probs=132.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC---------
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--------- 71 (295)
|||+|.||.+++++|+++|++|+++.+......... ..++.....++.++.+|+++.++++.+++..
T Consensus 13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 3icc_A 13 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET----VYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG 88 (255)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHH----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred ECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH----HHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence 799999999999999999999998755443311110 1112233457889999999998888877642
Q ss_pred --CCcEEEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 72 --GFDVVYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 72 --~~d~vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
.+|++||+||.. ..++.++++++. +..++|++||...+...+ ..
T Consensus 89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~ 158 (255)
T 3icc_A 89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP----------DF 158 (255)
T ss_dssp SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT----------TB
T ss_pred CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC----------Cc
Confidence 399999999862 234555666644 345899999987653211 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..++++..++||.+..+...... ...+........+. ..+.+++|+|+
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~ 229 (255)
T 3icc_A 159 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF---------NRLGEVEDIAD 229 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT---------SSCBCHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc---------CCCCCHHHHHH
Confidence 234499999887753 35899999999999987542211 11112222222221 23467999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCcc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+++.++... ...|+.+++.++..
T Consensus 230 ~~~~l~s~~~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 230 TAAFLASPDSRWVTGQLIDVSGGSC 254 (255)
T ss_dssp HHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred HHHHHhCcccCCccCCEEEecCCee
Confidence 999998653 34689999988753
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=2e-16 Score=131.72 Aligned_cols=172 Identities=14% Similarity=0.099 Sum_probs=120.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|++...... ..++.....++.++.+|++|.+++.+++++. ++|+
T Consensus 37 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 111 (272)
T 1yb1_A 37 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEET-----AAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI 111 (272)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHH-----HHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence 79999999999999999999999999987552211 0112222357899999999999998887642 7999
Q ss_pred EEEcccCC--------------------hhcHHH----HHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
|||+||.. ..++.+ ++..+. +..++|++||...+.... ....|.
T Consensus 112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~ 181 (272)
T 1yb1_A 112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP----------FLLAYC 181 (272)
T ss_dssp EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH----------HHHHHH
T ss_pred EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC----------CchhHH
Confidence 99999862 122333 333333 667999999988753210 011244
Q ss_pred hhhHHHHHHhh----------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 130 KGKLNTESVLE----------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 130 ~~k~~~E~~~~----------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.+|+..+.+.+ ..+++++++|||.+.++.... . . .....+++++|+|+++
T Consensus 182 ~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-------------~-~------~~~~~~~~~~dva~~i 241 (272)
T 1yb1_A 182 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-------------P-S------TSLGPTLEPEEVVNRL 241 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-------------T-H------HHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-------------c-c------ccccCCCCHHHHHHHH
Confidence 89999887763 237999999999988874211 0 0 0112467899999999
Q ss_pred HHHhcCCC
Q 022578 200 VQVLGNEK 207 (295)
Q Consensus 200 ~~~~~~~~ 207 (295)
+.++.++.
T Consensus 242 ~~~~~~~~ 249 (272)
T 1yb1_A 242 MHGILTEQ 249 (272)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 99998753
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=7.8e-15 Score=122.21 Aligned_cols=195 Identities=11% Similarity=0.033 Sum_probs=131.3
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+ |+||.+++++|+++|++|++++|+... .+. ..++.+...++.++.+|++|++++.++++.. ++
T Consensus 12 TGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~-----~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 85 (275)
T 2pd4_A 12 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKR-----VRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL 85 (275)
T ss_dssp ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHH-----HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred ECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHH-----HHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 7998 999999999999999999999998741 111 1111221235789999999999998887643 78
Q ss_pred cEEEEcccCCh------------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .++.++++++. ...++|++||...+.... ..
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~ 155 (275)
T 2pd4_A 86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA----------HY 155 (275)
T ss_dssp EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT----------TC
T ss_pred CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCC----------Cc
Confidence 99999998532 13444555543 236999999977643211 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|+..+.+.+ ..|++++.++||.+.++..... ....+...+....+. ..+.+++|+|+
T Consensus 156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dva~ 226 (275)
T 2pd4_A 156 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVGN 226 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------CCCCCHHHHHH
Confidence 224599999887763 3489999999999998753211 112222222222221 12457999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCcc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+++.++... ...|+.+++.++..
T Consensus 227 ~~~~l~s~~~~~~tG~~~~vdgg~~ 251 (275)
T 2pd4_A 227 AGMYLLSSLSSGVSGEVHFVDAGYH 251 (275)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHhCccccCCCCCEEEECCCcc
Confidence 999998753 23678899988753
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=5.2e-15 Score=126.30 Aligned_cols=195 Identities=11% Similarity=0.038 Sum_probs=132.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhh-hccCCeEEEEecCCChH----------------
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD---------------- 62 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~---------------- 62 (295)
|||+|+||.+++++|+++|++|++++ |+.+...... .++. ....++.++.+|++|.+
T Consensus 52 TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 126 (328)
T 2qhx_A 52 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 126 (328)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence 79999999999999999999999999 8765422110 1111 12346899999999998
Q ss_pred -HHHHhhhcC-----CCcEEEEcccCCh-----------------------h-----------cHHHHHHh----CC--C
Q 022578 63 -FVKSSLSAK-----GFDVVYDINGREA-----------------------D-----------EVEPILDA----LP--N 96 (295)
Q Consensus 63 -~~~~~~~~~-----~~d~vi~~a~~~~-----------------------~-----------~~~~ll~~----~~--~ 96 (295)
++.++++.. .+|++||+||... + ++.+++++ +. +
T Consensus 127 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 206 (328)
T 2qhx_A 127 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 206 (328)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888877643 7999999998621 1 12233333 22 3
Q ss_pred ------CCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch
Q 022578 97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV 163 (295)
Q Consensus 97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~ 163 (295)
..+||++||...+... .....|..+|+..+.+.+ ..+++++.++||.+.++. .. .
T Consensus 207 ~~~~~~~g~IV~isS~~~~~~~----------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~-~ 274 (328)
T 2qhx_A 207 AKHRGTNYSIINMVDAMTNQPL----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM-P 274 (328)
T ss_dssp GGGSCSCEEEEEECCTTTTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS-C
T ss_pred CcCCCCCcEEEEECchhhccCC----------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc-c
Confidence 5799999998765321 111234599999887763 358999999999999886 22 1
Q ss_pred HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 164 EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
...........++ +. .+..++|+|++++.++... ...|+.+++.++..+
T Consensus 275 -~~~~~~~~~~~p~---~~-----r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 325 (328)
T 2qhx_A 275 -PAVWEGHRSKVPL---YQ-----RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325 (328)
T ss_dssp -HHHHHHHHTTCTT---TT-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred -HHHHHHHHhhCCC---CC-----CCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence 2223333222221 10 2467999999999998642 346889999888543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2e-15 Score=123.38 Aligned_cols=176 Identities=11% Similarity=0.042 Sum_probs=124.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-------CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~~~ 73 (295)
|||+|+||++++++|+++|++|++++|++.... ....++.+|++|++++.+++++ .++
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i 77 (241)
T 1dhr_A 13 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 77 (241)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred ECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 799999999999999999999999999876521 2356788999999988887764 279
Q ss_pred cEEEEcccCCh---------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 74 DVVYDINGREA---------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 74 d~vi~~a~~~~---------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|++||+||... .++.++++++. ...++|++||...+.... ....|
T Consensus 78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 147 (241)
T 1dhr_A 78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----------GMIGY 147 (241)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------TBHHH
T ss_pred CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC----------CchHH
Confidence 99999998521 12333444432 235999999988763211 11234
Q ss_pred chhhHHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|...+.+.+ ..+++++.++||.+-.+. ........ ....+++++|+|+++
T Consensus 148 ~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~---------~~~~~~~~---------~~~~~~~~~~vA~~v 209 (241)
T 1dhr_A 148 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM---------NRKSMPEA---------DFSSWTPLEFLVETF 209 (241)
T ss_dssp HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH---------HHHHSTTS---------CGGGSEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc---------ccccCcch---------hhccCCCHHHHHHHH
Confidence 489999887763 346999999999887651 11111111 122457889999999
Q ss_pred HHHhcCCC--CCCceEEecCCc
Q 022578 200 VQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+.++.... ..|+.+.+.++.
T Consensus 210 ~~l~~~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 210 HDWITGNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp HHHHTTTTCCCTTCEEEEEEET
T ss_pred HHHhcCCCcCccceEEEEeCCC
Confidence 99987543 357888887754
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=5.9e-16 Score=128.10 Aligned_cols=194 Identities=13% Similarity=0.210 Sum_probs=127.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|++...... ..++.....++.++.+|++|++++..++++. ++|+
T Consensus 13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 87 (262)
T 1zem_A 13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKA-----EASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF 87 (262)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999986552211 0111122346889999999999888777643 7999
Q ss_pred EEEcccCC---------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE---------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ....|
T Consensus 88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y 157 (262)
T 1zem_A 88 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP----------NMAAY 157 (262)
T ss_dssp EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT----------TBHHH
T ss_pred EEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC----------CCchH
Confidence 99999853 11233444443 2 567999999987653211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc------------h--HHH-HHHHHHcCCCcccCCCCCce
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------V--EEW-FFHRLKAGRPIPIPGSGIQV 186 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~------------~--~~~-~~~~~~~~~~~~~~~~~~~~ 186 (295)
..+|...+.+.+ ..|++++.++||.+..+..... . ... .........+.
T Consensus 158 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------- 228 (262)
T 1zem_A 158 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--------- 228 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT---------
T ss_pred HHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC---------
Confidence 589988876653 4689999999999877621000 0 000 11111111111
Q ss_pred eeeeeHHHHHHHHHHHhcCC--CCCCceEEecCC
Q 022578 187 TQLGHVKDLARAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 187 ~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
..+..++|+|++++.++... ...|+.+.+.++
T Consensus 229 ~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 229 RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 13467899999999998753 236778887664
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-14 Score=120.46 Aligned_cols=193 Identities=14% Similarity=0.112 Sum_probs=129.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCC-CccccCCCCCCchhhh-hccCCeEEEEecCCC----hHHHHHhhhcC---
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLSAK--- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~----~~~~~~~~~~~--- 71 (295)
|||+|+||.+++++|+++|++|++++|+. +..... ...+. ....++.++.+|++| .+++.++++..
T Consensus 29 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~ 103 (288)
T 2x9g_A 29 TGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSL-----ADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA 103 (288)
T ss_dssp TTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHH-----HHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHH-----HHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence 89999999999999999999999999987 432111 00111 223568899999999 88888777642
Q ss_pred --CCcEEEEcccCCh----------h--------------------cHHHH----HHhCC--C------CCcEEEeeccc
Q 022578 72 --GFDVVYDINGREA----------D--------------------EVEPI----LDALP--N------LEQFIYCSSAG 107 (295)
Q Consensus 72 --~~d~vi~~a~~~~----------~--------------------~~~~l----l~~~~--~------~~~~i~~Ss~~ 107 (295)
++|++||+||... + ++.++ +..+. + ..++|++||..
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~ 183 (288)
T 2x9g_A 104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM 183 (288)
T ss_dssp HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence 7999999998521 1 12223 33343 3 56999999987
Q ss_pred cccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccC
Q 022578 108 VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180 (295)
Q Consensus 108 v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 180 (295)
.+.... ....|..+|+..+.+.+ ..|++++.++||.++++. .. . ...........+.
T Consensus 184 ~~~~~~----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~-~-~~~~~~~~~~~p~--- 247 (288)
T 2x9g_A 184 VDQPCM----------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM-G-EEEKDKWRRKVPL--- 247 (288)
T ss_dssp TTSCCT----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS-C-HHHHHHHHHTCTT---
T ss_pred ccCCCC----------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc-C-hHHHHHHHhhCCC---
Confidence 653211 11224599998877653 358999999999999986 21 1 1112222222221
Q ss_pred CCCCceeee-eeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 181 GSGIQVTQL-GHVKDLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 181 ~~~~~~~~~-i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+ .+ .+++|+|++++.++... ...|+.+++.++..
T Consensus 248 ~------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 248 G------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284 (288)
T ss_dssp T------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred C------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence 1 23 57999999999998753 34688899988754
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-15 Score=124.96 Aligned_cols=198 Identities=16% Similarity=0.148 Sum_probs=131.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-c-cCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|.||.+++++|+++|++|++++|+.+...+.. .++.. . ..++.++.+|++|.+++.++++.. .+
T Consensus 14 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (265)
T 3lf2_A 14 TGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAE-----SALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA 88 (265)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999876532111 11111 1 124889999999999988887643 78
Q ss_pred cEEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|++||+||.. ..++.++++++ . +..++|++||...+.... ....
T Consensus 89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~ 158 (265)
T 3lf2_A 89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP----------HMVA 158 (265)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT----------TBHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC----------Cchh
Confidence 9999999862 22344444443 3 456899999987653211 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc---------hHHHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---------VEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
|..+|+..+.+.+ ..|+++..++||.+.++..... ....+..........+ ...+..
T Consensus 159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~ 231 (265)
T 3lf2_A 159 TSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP-------LGRLGK 231 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT-------TCSCBC
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC-------cCCCcC
Confidence 4499999887763 3589999999999987621000 0011111111111111 123567
Q ss_pred HHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 192 VKDLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
++|+|++++.++.+. ...|+.+++.+|..
T Consensus 232 pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 232 PIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred HHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 999999999998753 34688999988753
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.7e-15 Score=122.35 Aligned_cols=192 Identities=14% Similarity=0.089 Sum_probs=123.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||.+++++|+++|++|++++|+++...... .++... .++.++.+|++|++++.++++.. .+|+
T Consensus 27 TGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~-----~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 100 (272)
T 2nwq_A 27 TGATSGFGEACARRFAEAGWSLVLTGRREERLQALA-----GELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG 100 (272)
T ss_dssp SSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999865522110 001111 36889999999999999998742 5799
Q ss_pred EEEcccCCh---------------------hcH----HHHHHhCC--CCC-cEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGREA---------------------DEV----EPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~~---------------------~~~----~~ll~~~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||+||... .++ +.++..+. +.. ++|++||...+.... ....
T Consensus 101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~----------~~~~ 170 (272)
T 2nwq_A 101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYP----------GSHV 170 (272)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCT----------TCHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCC----------CCch
Confidence 999998632 122 33344443 556 999999987653211 1123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|+..+.+.+ ..|++++.++||.+.++...... ... ......... ...++.++|+|++++
T Consensus 171 Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~----~~~--~~~~~~~~~----~~~~~~pedvA~~v~ 240 (272)
T 2nwq_A 171 YGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRF----GGD--QARYDKTYA----GAHPIQPEDIAETIF 240 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccc----ccc--hHHHHHhhc----cCCCCCHHHHHHHHH
Confidence 5599999988763 35899999999999887321100 000 000000000 012478999999999
Q ss_pred HHhcCCC-CCCceEEecCC
Q 022578 201 QVLGNEK-ASRQVFNISGE 218 (295)
Q Consensus 201 ~~~~~~~-~~~~~~~i~~~ 218 (295)
.++..+. ..+..+.+.++
T Consensus 241 ~l~s~~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 241 WIMNQPAHLNINSLEIMPV 259 (272)
T ss_dssp HHHTSCTTEEEEEEEEEET
T ss_pred HHhCCCccCccceEEEeec
Confidence 9998643 34556666554
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.7e-15 Score=123.41 Aligned_cols=192 Identities=13% Similarity=0.104 Sum_probs=127.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecC--CChHHHHHhhhcC-----C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDR--KDYDFVKSSLSAK-----G 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~--~~~~~~~~~~~~~-----~ 72 (295)
|||+|+||.+++++|+++|++|++++|+.+...+.. ..+.+. ..++.++.+|+ +|.+++.++++.. .
T Consensus 18 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~ 92 (252)
T 3f1l_A 18 TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVA-----SHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR 92 (252)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence 799999999999999999999999999876532111 111111 23788999999 8888888777642 7
Q ss_pred CcEEEEcccCC---------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGRE---------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 73 ~d~vi~~a~~~---------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+|++||+||.. ..++.++++++ + +..++|++||...+.... ..
T Consensus 93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~ 162 (252)
T 3f1l_A 93 LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA----------NW 162 (252)
T ss_dssp CSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCT----------TC
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCC----------CC
Confidence 99999999862 22344444443 2 567999999987653211 11
Q ss_pred CccchhhHHHHHHhh----h--cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 126 KSRHKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..|..+|+..+.+.+ + ..+++..+.||.+..+ +........ ....+.+++|+|+++
T Consensus 163 ~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~p~dva~~~ 224 (252)
T 3f1l_A 163 GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA---------MRASAFPTE---------DPQKLKTPADIMPLY 224 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH---------HHHHHCTTC---------CGGGSBCTGGGHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc---------hhhhhCCcc---------chhccCCHHHHHHHH
Confidence 234599999887763 2 2388999999987665 111111111 112356789999999
Q ss_pred HHHhcCCC--CCCceEEecCCcccCHHH
Q 022578 200 VQVLGNEK--ASRQVFNISGEKYVTFDG 225 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~~~t~~e 225 (295)
+.++.+.. ..|+.+++.+|...++.|
T Consensus 225 ~~L~s~~~~~itG~~i~vdgG~~~~~~q 252 (252)
T 3f1l_A 225 LWLMGDDSRRKTGMTFDAQPGRKPGISQ 252 (252)
T ss_dssp HHHHSGGGTTCCSCEEESSCC-------
T ss_pred HHHcCccccCCCCCEEEeCCCcCCCCCC
Confidence 99987642 468899999988766543
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.3e-15 Score=123.40 Aligned_cols=192 Identities=12% Similarity=0.099 Sum_probs=131.5
Q ss_pred CCcCCcchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcC----
Q 022578 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK---- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~---- 71 (295)
|||+|.||.+++++|+++|+ +|++++|+.+...+.. .++... ..++.++.+|++|.+++++++++.
T Consensus 39 TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 113 (287)
T 3rku_A 39 TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELK-----KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF 113 (287)
T ss_dssp ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 79999999999999999987 9999999876532111 111111 246889999999999999988753
Q ss_pred -CCcEEEEcccCC---------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCC
Q 022578 72 -GFDVVYDINGRE---------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTV 123 (295)
Q Consensus 72 -~~d~vi~~a~~~---------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~ 123 (295)
++|++||+||.. ..++.++++++ + +..++|++||...+....
T Consensus 114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~---------- 183 (287)
T 3rku_A 114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYP---------- 183 (287)
T ss_dssp CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCC----------
Confidence 699999999852 22344455543 3 668999999987653211
Q ss_pred CCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCC---CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 022578 124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 124 ~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (295)
....|..+|+..+.+.+ ..|+++..++||.+..+.. ........ ...... ..++.++
T Consensus 184 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~------------~~p~~pe 250 (287)
T 3rku_A 184 TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQA-KNVYKD------------TTPLMAD 250 (287)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHH-HHHHTT------------SCCEEHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHH-HHhhcc------------cCCCCHH
Confidence 11234599999887763 3689999999999988721 00000000 000000 1234899
Q ss_pred HHHHHHHHHhcCCCC--CCceEEecCCcc
Q 022578 194 DLARAFVQVLGNEKA--SRQVFNISGEKY 220 (295)
Q Consensus 194 D~a~~i~~~~~~~~~--~~~~~~i~~~~~ 220 (295)
|+|++++.++.++.. .++.+.+.+++.
T Consensus 251 dvA~~v~~l~s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 251 DVADLIVYATSRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp HHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred HHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence 999999999987543 477888888764
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.9e-15 Score=122.07 Aligned_cols=181 Identities=17% Similarity=0.144 Sum_probs=121.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+++..... ..++.....++.++.+|++|++++.+++++. ++|+
T Consensus 13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 87 (247)
T 2jah_A 13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRAL-----GDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDI 87 (247)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999986552211 1111222356889999999999988887642 7999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++++++ . + .++|++||...+.... ....|.
T Consensus 88 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----------~~~~Y~ 156 (247)
T 2jah_A 88 LVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVR----------NAAVYQ 156 (247)
T ss_dssp EEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCT----------TCHHHH
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCC----------CCcHHH
Confidence 99999862 22344444443 2 5 7999999987653211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|++++.++||.+.++.......... ...... .++. ..+++++|+|++++.+
T Consensus 157 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~----~~~~----~~~~~pedvA~~v~~l 227 (247)
T 2jah_A 157 ATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTAT-KEMYEQ----RISQ----IRKLQAQDIAEAVRYA 227 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHH-HHHHHH----HTTT----SCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhh-HHHHHh----cccc----cCCCCHHHHHHHHHHH
Confidence 89988876652 468999999999998874211000111 111110 1110 1147899999999999
Q ss_pred hcCC
Q 022578 203 LGNE 206 (295)
Q Consensus 203 ~~~~ 206 (295)
+.++
T Consensus 228 ~s~~ 231 (247)
T 2jah_A 228 VTAP 231 (247)
T ss_dssp HHSC
T ss_pred hCCC
Confidence 8764
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.62 E-value=4e-15 Score=124.59 Aligned_cols=191 Identities=16% Similarity=0.204 Sum_probs=127.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCC--CCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|.||.+++++|+++|++|++++|+..+....... ....++.....++.++.+|++|.+++.+++++. .+
T Consensus 15 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 94 (285)
T 3sc4_A 15 SGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGI 94 (285)
T ss_dssp ESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 79999999999999999999999999998763322110 011122333457899999999999998888753 89
Q ss_pred cEEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|++||+||.. ..++.+++++ ++ +..++|++||...+... ......
T Consensus 95 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~~ 165 (285)
T 3sc4_A 95 DICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK---------WLRPTP 165 (285)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG---------GSCSHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC---------CCCCch
Confidence 9999999862 2234444444 33 55799999997654221 011233
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCe-eecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|+..+.+.+ ..|+++..++||. +-.+ +......... + ...+..++|+|+++
T Consensus 166 Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~---------~~~~~~~~~~-~-------~~r~~~pedvA~~~ 228 (285)
T 3sc4_A 166 YMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA---------AVQNLLGGDE-A-------MARSRKPEVYADAA 228 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH---------HHHHHHTSCC-C-------CTTCBCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH---------HHHhhccccc-c-------ccCCCCHHHHHHHH
Confidence 5599999887753 4689999999984 3222 1222222211 1 12346789999999
Q ss_pred HHHhcCCC-CCCceEEecC
Q 022578 200 VQVLGNEK-ASRQVFNISG 217 (295)
Q Consensus 200 ~~~~~~~~-~~~~~~~i~~ 217 (295)
+.++.++. ..|+.+.+.+
T Consensus 229 ~~l~s~~~~~tG~~i~~dg 247 (285)
T 3sc4_A 229 YVVLNKPSSYTGNTLLCED 247 (285)
T ss_dssp HHHHTSCTTCCSCEEEHHH
T ss_pred HHHhCCcccccceEEEEcC
Confidence 99998753 3455554443
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.3e-15 Score=125.51 Aligned_cols=193 Identities=13% Similarity=0.118 Sum_probs=130.4
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|.||.+++++|+++| +.|+++.|+....... ..+...++.++.+|++|.+++++++++. .+
T Consensus 8 TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKL--------KEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHH--------HHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHH--------HHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence 8999999999999999984 7899888886652211 1122357899999999999998888753 89
Q ss_pred cEEEEcccCC---------------------hhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCC-
Q 022578 74 DVVYDINGRE---------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK- 126 (295)
Q Consensus 74 d~vi~~a~~~---------------------~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~- 126 (295)
|++||+||.. ..++.++++++ + ...++|++||...+... .+.
T Consensus 80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~-----------~~~~ 148 (254)
T 3kzv_A 80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYF-----------SSWG 148 (254)
T ss_dssp CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSS-----------CCSH
T ss_pred cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCC-----------CCcc
Confidence 9999999862 22344454443 3 23799999998765321 122
Q ss_pred ccchhhHHHHHHhhh-----cCCcEEEeccCeeecCCCCCc--------hHHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 022578 127 SRHKGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 127 ~~~~~k~~~E~~~~~-----~~~~~~i~R~~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (295)
.|..+|+..+.+.+. .++++..++||.+.++..... .............+ ...+.+++
T Consensus 149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~ 219 (254)
T 3kzv_A 149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------NNQLLDSS 219 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------TC----CH
T ss_pred hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------cCCcCCcc
Confidence 344999998887632 489999999999998753211 01112222211111 12357799
Q ss_pred HHHHHHHHHhcCCC---CCCceEEecCCccc
Q 022578 194 DLARAFVQVLGNEK---ASRQVFNISGEKYV 221 (295)
Q Consensus 194 D~a~~i~~~~~~~~---~~~~~~~i~~~~~~ 221 (295)
|+|++++.++.+.. ..|+.+++.+++..
T Consensus 220 dva~~v~~L~s~~~~~~itG~~i~vdg~~~~ 250 (254)
T 3kzv_A 220 VPATVYAKLALHGIPDGVNGQYLSYNDPALA 250 (254)
T ss_dssp HHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred cHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence 99999999987652 46888998887643
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.7e-14 Score=116.16 Aligned_cols=186 Identities=18% Similarity=0.209 Sum_probs=130.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.++++.|+++|++|.+.+|+.+...+ +.+...++..+.+|++|++++++++++ .++|+
T Consensus 8 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~---------~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 8 TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD---------FAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998765321 222246788999999999988887754 38999
Q ss_pred EEEcccCC--------------------hhcHHH----HHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE--------------------ADEVEP----ILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~----ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+||.. ..++.. ++..+. +..++|++||...+...+ ....|..
T Consensus 79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~----------~~~~Y~a 148 (247)
T 3ged_A 79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP----------DSEAYAS 148 (247)
T ss_dssp EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT----------TCHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCC----------CCHHHHH
Confidence 99999872 223333 333333 557999999987643211 1123458
Q ss_pred hhHHHHHHhh------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 131 GKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 131 ~k~~~E~~~~------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+|.....+.+ ..++++..+.||.+-.+.... +.+......|+ + -+..++|+|++++.++.
T Consensus 149 sKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~-----~~~~~~~~~Pl---~------R~g~pediA~~v~fL~s 214 (247)
T 3ged_A 149 AKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE-----FTQEDCAAIPA---G------KVGTPKDISNMVLFLCQ 214 (247)
T ss_dssp HHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------CCHHHHHTSTT---S------SCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH-----HHHHHHhcCCC---C------CCcCHHHHHHHHHHHHh
Confidence 9998876653 248999999999987764321 11222222222 1 23568999999999998
Q ss_pred CCCCCCceEEecCCc
Q 022578 205 NEKASRQVFNISGEK 219 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~ 219 (295)
..-..|+.+.+.||-
T Consensus 215 ~~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 215 QDFITGETIIVDGGM 229 (247)
T ss_dssp CSSCCSCEEEESTTG
T ss_pred CCCCCCCeEEECcCH
Confidence 665678999998884
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-15 Score=123.42 Aligned_cols=170 Identities=16% Similarity=0.131 Sum_probs=118.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|+||++++++|+++|++|++++|+.+...+.. .....++.++.+|++|.+++++++++. .+|+
T Consensus 9 TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE--------LLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 799999999999999999999999999876532111 111236899999999999998887653 7899
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+||.. ..++.+++++ ++ ...++|++||...+.... ....|..
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~a 150 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKA----------NESLYCA 150 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCS----------SHHHHHH
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCC----------CCcHHHH
Confidence 99999862 2234334444 33 233999999977643211 1123459
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|+..+.+.+ ..|+++..++||.+..+.... . ... ....+++++|+|++++.++
T Consensus 151 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---------~-~~~---------~~~~~~~pedvA~~v~~l~ 211 (235)
T 3l6e_A 151 SKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN---------T-DHV---------DPSGFMTPEDAAAYMLDAL 211 (235)
T ss_dssp HHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc---------c-CCC---------CCcCCCCHHHHHHHHHHHH
Confidence 9999887763 357999999999997763211 0 000 1124678999999999999
Q ss_pred cCCC
Q 022578 204 GNEK 207 (295)
Q Consensus 204 ~~~~ 207 (295)
.++.
T Consensus 212 ~~~~ 215 (235)
T 3l6e_A 212 EARS 215 (235)
T ss_dssp CCCS
T ss_pred hCCC
Confidence 8654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.7e-15 Score=123.36 Aligned_cols=182 Identities=13% Similarity=0.101 Sum_probs=120.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccC-CeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||.+++++|+++|++|++++|+.+...+.. .++.+... .+.++.+|++|.+++.++++.. .+|
T Consensus 39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 113 (281)
T 4dry_A 39 TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAA-----GEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLD 113 (281)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 899999999999999999999999999876532111 11111112 3589999999999998888653 789
Q ss_pred EEEEcccCC---------------------hhcHHHHH----HhCC--C--CCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 75 VVYDINGRE---------------------ADEVEPIL----DALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 75 ~vi~~a~~~---------------------~~~~~~ll----~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
++||+||.. ..++.+++ ..+. + ..++|++||...+... ...
T Consensus 114 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~~ 183 (281)
T 4dry_A 114 LLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR----------PNS 183 (281)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC----------TTC
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC----------CCC
Confidence 999999862 11222333 3333 2 4699999998764221 111
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..|..+|+..+.+.+ ..++++..++||.+..+.. .....+ .... ........++.++|+|++
T Consensus 184 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~---------~~~~~~-~~~~-~~~~~~~~~~~pedvA~~ 252 (281)
T 4dry_A 184 APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT---------ARMSTG-VLQA-NGEVAAEPTIPIEHIAEA 252 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------CE-EECT-TSCEEECCCBCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh---------hhhcch-hhhh-hhcccccCCCCHHHHHHH
Confidence 234599999887763 4689999999999887632 111111 0000 111122346789999999
Q ss_pred HHHHhcCCCC
Q 022578 199 FVQVLGNEKA 208 (295)
Q Consensus 199 i~~~~~~~~~ 208 (295)
++.++.++..
T Consensus 253 v~fL~s~~~~ 262 (281)
T 4dry_A 253 VVYMASLPLS 262 (281)
T ss_dssp HHHHHHSCTT
T ss_pred HHHHhCCCcc
Confidence 9999987654
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.1e-15 Score=121.33 Aligned_cols=170 Identities=14% Similarity=0.103 Sum_probs=115.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC--CCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~ 78 (295)
|||+|+||.+++++|+++|++|++++|+.+...... .+...++.++.+|+++.+++++++++. ..|++||
T Consensus 7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVT--------NCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH--------HTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 799999999999999999999999999876632111 111357889999999999999999842 2499999
Q ss_pred cccCC--------------------hhcHHHHHHh----CC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhH
Q 022578 79 INGRE--------------------ADEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL 133 (295)
Q Consensus 79 ~a~~~--------------------~~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~ 133 (295)
+||.. ..++.+++++ +. ...++|++||...+.... ....|..+|+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~asKa 148 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA----------QESTYCAVKW 148 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT----------TCHHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC----------CCchhHHHHH
Confidence 99862 2234444444 33 334999999988753211 1123459999
Q ss_pred HHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 134 ~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
..+.+.+ ..++++..++||.+..+... .. +.. .....+++++|+|++++.++.++
T Consensus 149 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~--~~~-------~~~~~~~~~~dvA~~i~~l~~~~ 210 (230)
T 3guy_A 149 AVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE---------TS--GKS-------LDTSSFMSAEDAALMIHGALANI 210 (230)
T ss_dssp HHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH---------hc--CCC-------CCcccCCCHHHHHHHHHHHHhCc
Confidence 9888763 35899999999998776311 10 000 11235678999999999998754
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-15 Score=127.80 Aligned_cols=193 Identities=15% Similarity=0.148 Sum_probs=129.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||+|.||.+++++|+++|++|++++|+.+...+. ......++.++.+|+++.+++.+++++. .+|+
T Consensus 11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 11 TGGASGLGRALVDRFVAEGARVAVLDKSAERLREL--------EVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHH--------HHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999987653211 1222357899999999999888887653 7899
Q ss_pred EEEcccCC-------------------------hhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE-------------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 76 vi~~a~~~-------------------------~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+||+||.. ..++.++++++ . +..++|++||...+.... ..
T Consensus 83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~ 152 (281)
T 3zv4_A 83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG----------GG 152 (281)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS----------SC
T ss_pred EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC----------CC
Confidence 99999862 11233344443 2 346999999987653211 11
Q ss_pred CccchhhHHHHHHhhh------cCCcEEEeccCeeecCCCCCc---hHH------HHHHHHHcCCCcccCCCCCceeeee
Q 022578 126 KSRHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP---VEE------WFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~~------~~~~~~i~R~~~i~g~~~~~~---~~~------~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
..|..+|+..+.+.+. .++++..+.||.+..+..... ... .+........+. ..+.
T Consensus 153 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~ 223 (281)
T 3zv4_A 153 PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI---------GRMP 223 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT---------SSCC
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC---------CCCC
Confidence 2245999998887631 248999999999988732110 000 011112222221 2346
Q ss_pred eHHHHHHHHHHHhcCCC---CCCceEEecCCcc
Q 022578 191 HVKDLARAFVQVLGNEK---ASRQVFNISGEKY 220 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~~---~~~~~~~i~~~~~ 220 (295)
.++|+|++++.++.++. ..|+.+++.++..
T Consensus 224 ~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 224 ALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp CGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred CHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 78999999999998332 4688999998854
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.6e-14 Score=121.24 Aligned_cols=195 Identities=11% Similarity=0.037 Sum_probs=130.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhh-hccCCeEEEEecCCChH----------------
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD---------------- 62 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~---------------- 62 (295)
|||+|.||.+++++|+++|++|++++ |+.+...... ..+. ....++.++.+|+++.+
T Consensus 15 TGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 89 (291)
T 1e7w_A 15 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 89 (291)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred ECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-----HHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence 79999999999999999999999999 8765422110 1111 22357899999999998
Q ss_pred -HHHHhhhcC-----CCcEEEEcccCCh-----------------------h-----------cHHHHHHh----CC--C
Q 022578 63 -FVKSSLSAK-----GFDVVYDINGREA-----------------------D-----------EVEPILDA----LP--N 96 (295)
Q Consensus 63 -~~~~~~~~~-----~~d~vi~~a~~~~-----------------------~-----------~~~~ll~~----~~--~ 96 (295)
++.++++.. .+|++||+||... + ++.+++++ +. +
T Consensus 90 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~ 169 (291)
T 1e7w_A 90 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 169 (291)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 888877643 7999999998621 1 12233333 22 3
Q ss_pred ------CCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch
Q 022578 97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV 163 (295)
Q Consensus 97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~ 163 (295)
..++|++||...+.... ....|..+|...+.+.+ ..+++++.++||.+..+. . .
T Consensus 170 ~~~~~~~g~Iv~isS~~~~~~~~----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~ 236 (291)
T 1e7w_A 170 AKHRGTNYSIINMVDAMTNQPLL----------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--M 236 (291)
T ss_dssp GGGSCSCEEEEEECCTTTTSCCT----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--S
T ss_pred CCCCCCCcEEEEEechhhcCCCC----------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--C
Confidence 57999999987653211 11234599998887653 358999999999987764 1 1
Q ss_pred HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 164 EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
............+. +. .+..++|+|++++.++... ...|+.+++.++..+
T Consensus 237 ~~~~~~~~~~~~p~---~~-----r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 288 (291)
T 1e7w_A 237 PPAVWEGHRSKVPL---YQ-----RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288 (291)
T ss_dssp CHHHHHHHHTTCTT---TT-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CHHHHHHHHhhCCC---CC-----CCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence 12222222222111 10 2467999999999998753 346888999887543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.57 E-value=8e-15 Score=120.40 Aligned_cols=185 Identities=17% Similarity=0.192 Sum_probs=122.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc---cCCeEEEEecCCChHHHHHhhhcC-----C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAK-----G 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~-----~ 72 (295)
|||+|.||.+++++|+++|++|++++|+.+...+.. .++.+. ..++.++.+|++|.+++.+++++. .
T Consensus 13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (250)
T 3nyw_A 13 TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVH-----DEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA 87 (250)
T ss_dssp ESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHH-----HHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 799999999999999999999999999876532111 011111 156889999999999988887642 7
Q ss_pred CcEEEEcccCC-------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 73 FDVVYDINGRE-------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 73 ~d~vi~~a~~~-------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+|++||+||.. ..++.++++++ + +..++|++||...+... .....
T Consensus 88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~ 157 (250)
T 3nyw_A 88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF----------ADGGI 157 (250)
T ss_dssp EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------CCTTH
T ss_pred CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC----------CCCcc
Confidence 99999999862 22334444443 3 56799999997754211 11123
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
|..+|+..+.+.+ ..|+++..++||.+..+ +.... .... ....+++++|+|++++
T Consensus 158 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---------~~~~~--~~~~-------~~~~~~~p~dva~~v~ 219 (250)
T 3nyw_A 158 YGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD---------MAKKA--GTPF-------KDEEMIQPDDLLNTIR 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH---------HHHHT--TCCS-------CGGGSBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc---------hhhhc--CCCc-------ccccCCCHHHHHHHHH
Confidence 4599998887753 35899999999998765 11111 1111 1234688999999999
Q ss_pred HHhcCCCC---CCceEEecCC
Q 022578 201 QVLGNEKA---SRQVFNISGE 218 (295)
Q Consensus 201 ~~~~~~~~---~~~~~~i~~~ 218 (295)
.++..+.. .+-.+.+.++
T Consensus 220 ~l~s~~~~~~~~~~~i~vd~~ 240 (250)
T 3nyw_A 220 CLLNLSENVCIKDIVFEMKKS 240 (250)
T ss_dssp HHHTSCTTEECCEEEEEEHHH
T ss_pred HHHcCCCceEeeEEEEEeecc
Confidence 99986542 2234555444
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-14 Score=117.96 Aligned_cols=198 Identities=16% Similarity=0.120 Sum_probs=133.8
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhcC-----C
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----G 72 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~ 72 (295)
|||+ |.||.+++++|+++|++|++++|+........ ..++ .....++.++.+|++|.+++++++++. .
T Consensus 26 TGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 101 (267)
T 3gdg_A 26 TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEEN----VKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ 101 (267)
T ss_dssp TTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHH----HHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred ECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHH----HHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 7999 89999999999999999999998876531110 0111 122357899999999999998888753 7
Q ss_pred CcEEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 73 ~d~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
+|++||+||.. ..++.++++++ . +..++|++||...+.... +....
T Consensus 102 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------~~~~~ 173 (267)
T 3gdg_A 102 IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF--------PQEQT 173 (267)
T ss_dssp CSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS--------SSCCH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC--------CCCCC
Confidence 89999999862 22344455554 3 667999999977642210 01112
Q ss_pred ccchhhHHHHHHhh----h--cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 127 SRHKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 127 ~~~~~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.|..+|+..+.+.+ + ..+++..+.||.+..+.... .............+ ...+.+++|+|++++
T Consensus 174 ~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~r~~~~~dva~~~~ 243 (267)
T 3gdg_A 174 SYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF-VPKETQQLWHSMIP---------MGRDGLAKELKGAYV 243 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG-SCHHHHHHHHTTST---------TSSCEETHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh-CCHHHHHHHHhcCC---------CCCCcCHHHHHhHhh
Confidence 34599999888763 2 22789999999998764321 11222222222211 224577999999999
Q ss_pred HHhcCC--CCCCceEEecCCcc
Q 022578 201 QVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~~ 220 (295)
.++... ...|+.+++.+|..
T Consensus 244 ~l~s~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 244 YFASDASTYTTGADLLIDGGYT 265 (267)
T ss_dssp HHHSTTCTTCCSCEEEESTTGG
T ss_pred eeecCccccccCCEEEECCcee
Confidence 998763 34688999988854
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=129.26 Aligned_cols=198 Identities=16% Similarity=0.119 Sum_probs=132.4
Q ss_pred CCcCCcchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~ 75 (295)
|||+|+||..++++|+++|++ |++++|+....... . ....++.....++.++.+|++|.+++..+++.. .+|+
T Consensus 232 TGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~-~-~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~ 309 (486)
T 2fr1_A 232 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGA-G-ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA 309 (486)
T ss_dssp ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTH-H-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred ECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHH-H-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcE
Confidence 799999999999999999995 99999987531100 0 001112333457899999999999999999843 4599
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhH
Q 022578 76 VYDINGR--------------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL 133 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~ 133 (295)
|||+||. |+.++.++.+++. +.++||++||...+.+..+ ...|..+|.
T Consensus 310 VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g----------~~~Yaaaka 379 (486)
T 2fr1_A 310 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG----------LGGYAPGNA 379 (486)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT----------CTTTHHHHH
T ss_pred EEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC----------CHHHHHHHH
Confidence 9999986 3446778888877 7789999999755322211 134558888
Q ss_pred HHHHHh---hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 022578 134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210 (295)
Q Consensus 134 ~~E~~~---~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 210 (295)
..+.+. +..|+++++++||.+++++.... ... ..+ . .....+++.+|+++++..++..+..
T Consensus 380 ~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~--------~~~-~~~---~--~~g~~~i~~e~~a~~l~~~l~~~~~-- 443 (486)
T 2fr1_A 380 YLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--------PVA-DRF---R--RHGVIEMPPETACRALQNALDRAEV-- 443 (486)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECCBC---------------------C---T--TTTEECBCHHHHHHHHHHHHHTTCS--
T ss_pred HHHHHHHHHHhcCCeEEEEECCeeCCCcccch--------hHH-HHH---H--hcCCCCCCHHHHHHHHHHHHhCCCC--
Confidence 887665 45799999999999887642110 000 011 1 1224679999999999999987543
Q ss_pred ceEEecCCcccCHHHHHHHH
Q 022578 211 QVFNISGEKYVTFDGLARAC 230 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i 230 (295)
.+.+.. +.|..+...+
T Consensus 444 -~~~v~~---~d~~~~~~~~ 459 (486)
T 2fr1_A 444 -CPIVID---VRWDRFLLAY 459 (486)
T ss_dssp -SCEECE---ECHHHHHHHH
T ss_pred -eEEEEe---CCHHHHhhhh
Confidence 222322 5676665543
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-14 Score=121.20 Aligned_cols=173 Identities=15% Similarity=0.095 Sum_probs=118.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-CCeEEEEecCCChHHHHHhhhcC-----CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~-----~~d 74 (295)
|||+|+||.+++++|+++|++|++++|++....... ..+.+.. .++.++.+|++|.+++.++++.. ++|
T Consensus 34 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD 108 (286)
T 1xu9_A 34 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV-----SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD 108 (286)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999876532110 0111111 36889999999999888877642 799
Q ss_pred EEEEc-ccC-------------------ChhcHHHHHHhC----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 75 VVYDI-NGR-------------------EADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 75 ~vi~~-a~~-------------------~~~~~~~ll~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
++||+ ++. |..++.++++++ + +..++|++||...+.... ....|.
T Consensus 109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~ 178 (286)
T 1xu9_A 109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP----------MVAAYS 178 (286)
T ss_dssp EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT----------TCHHHH
T ss_pred EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC----------CccHHH
Confidence 99999 554 122344444443 2 447999999987653211 112345
Q ss_pred hhhHHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 130 ~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|...+.+.+ ..++++++++||.+.++. ......+ .....+++++|+|+.++
T Consensus 179 asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~---------~~~~~~~---------~~~~~~~~~~~vA~~i~ 240 (286)
T 1xu9_A 179 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET---------AMKAVSG---------IVHMQAAPKEECALEII 240 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH---------HHHHSCG---------GGGGGCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh---------HHHhccc---------cccCCCCCHHHHHHHHH
Confidence 89998887652 348999999999887651 1111011 11234688999999999
Q ss_pred HHhcCC
Q 022578 201 QVLGNE 206 (295)
Q Consensus 201 ~~~~~~ 206 (295)
..+..+
T Consensus 241 ~~~~~~ 246 (286)
T 1xu9_A 241 KGGALR 246 (286)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 998764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.9e-14 Score=120.94 Aligned_cols=191 Identities=14% Similarity=0.121 Sum_probs=128.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCC--CchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|.||.+++++|+++|++|++++|+..+........ ...++.....++.++.+|++|.+++.+++++. ++
T Consensus 51 TGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 130 (346)
T 3kvo_A 51 TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGI 130 (346)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred eCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999987643222110 11122333457889999999999998888753 89
Q ss_pred cEEEEcccC--------------------ChhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCC-
Q 022578 74 DVVYDINGR--------------------EADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK- 126 (295)
Q Consensus 74 d~vi~~a~~--------------------~~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~- 126 (295)
|++||+||. |..++.++++++ + +..++|++||...+... ...+.
T Consensus 131 DilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~---------~~~~~~ 201 (346)
T 3kvo_A 131 DILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV---------WFKQHC 201 (346)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---------GTSSSH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---------CCCCch
Confidence 999999986 334455555553 3 56799999998765321 01122
Q ss_pred ccchhhHHHHHHhh----h--cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 127 SRHKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 127 ~~~~~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.|..+|+..+.+.+ + .++++..+.||.+.... +.+.+.... ....+..++|+|++++
T Consensus 202 ~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~--------~~~~~~~~~---------~~~r~~~pedvA~~v~ 264 (346)
T 3kvo_A 202 AYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA--------AMDMLGGPG---------IESQCRKVDIIADAAY 264 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--------HHHHHCC-----------CGGGCBCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--------HHHhhcccc---------ccccCCCHHHHHHHHH
Confidence 24499998887753 2 58999999998633321 112211111 1223467899999999
Q ss_pred HHhcCCC-CCCceEEecCC
Q 022578 201 QVLGNEK-ASRQVFNISGE 218 (295)
Q Consensus 201 ~~~~~~~-~~~~~~~i~~~ 218 (295)
.++.+.. ..|+.+ +.++
T Consensus 265 ~L~s~~~~itG~~i-vdgg 282 (346)
T 3kvo_A 265 SIFQKPKSFTGNFV-IDEN 282 (346)
T ss_dssp HHHTSCTTCCSCEE-EHHH
T ss_pred HHHhcCCCCCceEE-ECCc
Confidence 9998733 245544 5443
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=2.8e-14 Score=117.43 Aligned_cols=193 Identities=15% Similarity=0.116 Sum_probs=120.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhh-hc-CCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SA-KGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~-~~-~~~d~vi~ 78 (295)
|||+|+||.+++++|+++|++|++++|+++..... ..+.....++..+ |..+.+.+.+.+ +. .++|++||
T Consensus 7 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH------HHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence 79999999999999999999999999987652211 0011112334333 554443332221 11 27999999
Q ss_pred cccCC-h--------------------hcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 79 INGRE-A--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 79 ~a~~~-~--------------------~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||.. . .++.++++++ . +..++|++||...+.... ....|..+
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~~s 148 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK----------ELSTYTSA 148 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT----------TCHHHHHH
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCC----------CchHHHHH
Confidence 99864 1 1233444443 2 567999999987653211 11234599
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHH-------HHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-------FHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
|...+.+.+ ..+++++.++||.++|+.........+ ........+ ...+.+++|+|+
T Consensus 149 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p---------~~~~~~p~dvA~ 219 (254)
T 1zmt_A 149 RAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA---------LQRLGTQKELGE 219 (254)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS---------SSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC---------CCCCcCHHHHHH
Confidence 999887753 358999999999998875422111111 111111111 113578999999
Q ss_pred HHHHHhcCCC--CCCceEEecCCcc
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
+++.++.... ..|+.+++.++..
T Consensus 220 ~v~~l~s~~~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 220 LVAFLASGSCDYLTGQVFWLAGGFP 244 (254)
T ss_dssp HHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred HHHHHhCcccCCccCCEEEECCCch
Confidence 9999987643 3688999988753
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-15 Score=124.32 Aligned_cols=180 Identities=16% Similarity=0.133 Sum_probs=109.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHH---HHhhhcC-CCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---KSSLSAK-GFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~---~~~~~~~-~~d~v 76 (295)
|||+|+||.+++++|++ |++|++++|++...... .+ ..++.++.+|+++.+.. .+.+++. ++|++
T Consensus 11 TGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~---------~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 79 (245)
T 3e9n_A 11 TGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAAL---------AE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL 79 (245)
T ss_dssp ESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------HT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred EcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHH---------Hh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence 79999999999999988 99999999987653211 11 25789999999887442 2222222 79999
Q ss_pred EEcccCC--------------------hhcHHHHHHh----CC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 77 YDINGRE--------------------ADEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 77 i~~a~~~--------------------~~~~~~ll~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
||+||.. ..++.+++++ ++ ...++|++||...+..... ...|..+
T Consensus 80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~as 149 (245)
T 3e9n_A 80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPG----------NTIYAAS 149 (245)
T ss_dssp EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC--------------------CHHHHHH
T ss_pred EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCC----------chHHHHH
Confidence 9999862 2233333333 33 3479999999887643211 1234599
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|+..+.+.+ ..|+++..++||.+.++.... +.... +. ......+++++|+|++++.++.
T Consensus 150 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~--~~-------~~~~~~~~~p~dvA~~i~~l~~ 215 (245)
T 3e9n_A 150 KHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-----LMDSQ--GT-------NFRPEIYIEPKEIANAIRFVID 215 (245)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-----hhhhh--hc-------ccccccCCCHHHHHHHHHHHHc
Confidence 999988763 368999999999998873211 11100 01 0112346789999999999998
Q ss_pred CCCCCCceEEec
Q 022578 205 NEKASRQVFNIS 216 (295)
Q Consensus 205 ~~~~~~~~~~i~ 216 (295)
.+.. +.++++.
T Consensus 216 ~~~~-~~~~~i~ 226 (245)
T 3e9n_A 216 AGET-TQITNVD 226 (245)
T ss_dssp SCTT-EEEEEEE
T ss_pred CCCc-cceeeeE
Confidence 7653 5577764
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.9e-14 Score=127.39 Aligned_cols=200 Identities=18% Similarity=0.196 Sum_probs=135.7
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|||+|+||..++++|+++|+ +|++++|+........ ....++.....++.++.+|++|.+++.++++...+|+|||+
T Consensus 265 TGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~--~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~ 342 (511)
T 2z5l_A 265 TGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAA--ELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHT 342 (511)
T ss_dssp ETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHH--HHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHH--HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEEC
Confidence 79999999999999999999 6888999864311000 00111222235689999999999999999985569999999
Q ss_pred ccC--------------------ChhcHHHHHHhCC---CCCcEEEeecccc-ccCCCCCCCCCCCCCCCCccchhhHHH
Q 022578 80 NGR--------------------EADEVEPILDALP---NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKGKLNT 135 (295)
Q Consensus 80 a~~--------------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~p~~~~~~k~~~ 135 (295)
+|. |..++.++.+++. +.++||++||... ++.. ....|..+|...
T Consensus 343 AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~-----------g~~~YaaaKa~l 411 (511)
T 2z5l_A 343 AGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA-----------GQGAYAAANAAL 411 (511)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT-----------TBHHHHHHHHHH
T ss_pred CcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC-----------CCHHHHHHHHHH
Confidence 986 2345677888876 5679999999754 3321 112355899998
Q ss_pred HHHh---hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCce
Q 022578 136 ESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212 (295)
Q Consensus 136 E~~~---~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~ 212 (295)
+.+. +..|+++++++||.+-+.+....... ..+.. ....+++++|+++++..++..+.. .
T Consensus 412 d~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~---~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~~---~ 474 (511)
T 2z5l_A 412 DALAERRRAAGLPATSVAWGLWGGGGMAAGAGE---ESLSR-----------RGLRAMDPDAAVDALLGAMGRNDV---C 474 (511)
T ss_dssp HHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHH---HHHHH-----------HTBCCBCHHHHHHHHHHHHHHTCS---E
T ss_pred HHHHHHHHHcCCcEEEEECCcccCCcccccccH---HHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC---E
Confidence 8876 35799999999998744332222111 11110 112458899999999999986532 2
Q ss_pred EEecCCcccCHHHHHHHHHHH
Q 022578 213 FNISGEKYVTFDGLARACAKV 233 (295)
Q Consensus 213 ~~i~~~~~~t~~e~~~~i~~~ 233 (295)
+.+.. +.|..+...+...
T Consensus 475 v~v~~---~d~~~~~~~~~~~ 492 (511)
T 2z5l_A 475 VTVVD---VDWERFAPATNAI 492 (511)
T ss_dssp EEECC---BCHHHHHHHHHHH
T ss_pred EEEEe---CCHHHHHhhhccc
Confidence 33332 5677776655443
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-13 Score=112.93 Aligned_cols=196 Identities=13% Similarity=0.108 Sum_probs=133.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||..+++.|+++|.+|.+.+|+.+...+. ..++.+...++..+.+|++|++++++++++ -.+|+
T Consensus 13 TGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~-----~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi 87 (254)
T 4fn4_A 13 TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQI-----VQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDV 87 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 79999999999999999999999999987663221 122344456789999999999998887765 38999
Q ss_pred EEEcccCC---------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE---------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~---------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..+ ++.++..+. +..++|++||...+.... ....|
T Consensus 88 LVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~----------~~~~Y 157 (254)
T 4fn4_A 88 LCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF----------AGAPY 157 (254)
T ss_dssp EEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSS----------SCHHH
T ss_pred EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCC----------CChHH
Confidence 99999852 112 333444444 667999999987542211 11235
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCC--chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|.....+. ..+|+++..+.||.+-.|.... .......+...+..+ ..+ -+..++|+|+++
T Consensus 158 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~------R~g~pediA~~v 229 (254)
T 4fn4_A 158 TVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS--LSS------RLAEPEDIANVI 229 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT--TCC------CCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC--CCC------CCcCHHHHHHHH
Confidence 58999887765 3578999999999998764211 101111111111111 001 234689999999
Q ss_pred HHHhcCC--CCCCceEEecCCc
Q 022578 200 VQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+.++.+. ...|+.+.+.||-
T Consensus 230 ~fLaSd~a~~iTG~~i~VDGG~ 251 (254)
T 4fn4_A 230 VFLASDEASFVNGDAVVVDGGL 251 (254)
T ss_dssp HHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhCchhcCCcCCEEEeCCCc
Confidence 9998753 2468899998874
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=5e-14 Score=116.33 Aligned_cols=186 Identities=16% Similarity=0.078 Sum_probs=117.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc------CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d 74 (295)
|||+|+||.+++++|+++|++|++++|+++..... ..++.....++.++.+|++|++++..+++. ..+|
T Consensus 11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id 85 (260)
T 2qq5_A 11 TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVV-----AQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLD 85 (260)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence 79999999999999999999999999986552211 011122234688999999999988877653 2689
Q ss_pred EEEEcccC---------------------------ChhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC
Q 022578 75 VVYDINGR---------------------------EADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD 121 (295)
Q Consensus 75 ~vi~~a~~---------------------------~~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~ 121 (295)
++||+||. |..++ +.++..+. +..++|++||...+...
T Consensus 86 ~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 156 (260)
T 2qq5_A 86 VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM--------- 156 (260)
T ss_dssp EEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC---------
T ss_pred EEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC---------
Confidence 99999941 11122 22333333 56799999998765311
Q ss_pred CCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 122 ~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
....|..+|...+.+.+ ..|+++++++||.+..+......... ............. .......++|
T Consensus 157 --~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~pe~ 229 (260)
T 2qq5_A 157 --FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE---EVLQDPVLKQFKS--AFSSAETTEL 229 (260)
T ss_dssp --SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHHH
T ss_pred --CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc---cccchhHHHHHHh--hhccCCCHHH
Confidence 11234599999988763 35899999999999887421110000 0000000000000 0111357899
Q ss_pred HHHHHHHHhcCCC
Q 022578 195 LARAFVQVLGNEK 207 (295)
Q Consensus 195 ~a~~i~~~~~~~~ 207 (295)
+|++++.++..+.
T Consensus 230 va~~v~~l~s~~~ 242 (260)
T 2qq5_A 230 SGKCVVALATDPN 242 (260)
T ss_dssp HHHHHHHHHTCTT
T ss_pred HHHHHHHHhcCcc
Confidence 9999999987653
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.6e-14 Score=118.12 Aligned_cols=186 Identities=17% Similarity=0.132 Sum_probs=122.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCC--CchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~ 73 (295)
|||+|.||.+++++|+++|++|++++|+..+........ ....+.....++.++.+|++|++++.+++++. .+
T Consensus 12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 91 (274)
T 3e03_A 12 TGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGI 91 (274)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999987633221110 01112223457889999999999988887653 79
Q ss_pred cEEEEcccC--------------------ChhcHHHHHHh----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 74 DVVYDINGR--------------------EADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 74 d~vi~~a~~--------------------~~~~~~~ll~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
|++||+||. |..++.+++++ +. +..++|++||...+.... ......
T Consensus 92 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------~~~~~~ 163 (274)
T 3e03_A 92 DILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW--------WGAHTG 163 (274)
T ss_dssp CEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH--------HHHCHH
T ss_pred CEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC--------CCCCch
Confidence 999999986 23334444444 33 567999999977542200 000122
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCe-eecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|..+|+..+.+.+ ..|+++..+.||. +-.+.. . ...+.+ ...+..++|+|+++
T Consensus 164 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~---------~-~~~~~~---------~~~~~~pedvA~~v 224 (274)
T 3e03_A 164 YTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI---------N-MLPGVD---------AAACRRPEIMADAA 224 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------CCC---------GGGSBCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh---------h-hccccc---------ccccCCHHHHHHHH
Confidence 4599999887753 4689999999985 333310 1 111111 11256799999999
Q ss_pred HHHhcCCC--CCCceE
Q 022578 200 VQVLGNEK--ASRQVF 213 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~ 213 (295)
+.++.... ..|+.+
T Consensus 225 ~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 225 HAVLTREAAGFHGQFL 240 (274)
T ss_dssp HHHHTSCCTTCCSCEE
T ss_pred HHHhCccccccCCeEE
Confidence 99997643 245555
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-13 Score=114.28 Aligned_cols=192 Identities=16% Similarity=0.167 Sum_probs=131.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||..+++.|+++|++|++.+|+.+...+ ...+...++..+.+|++|++++++++++ -++|+
T Consensus 35 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~--------~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 35 TGATSGIGLAAAKRFVAEGARVFITGRRKDVLDA--------AIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999998766322 1233346788999999999998887765 27999
Q ss_pred EEEcccCC--------------------hhcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||+||.. ..++..+.+++. +..++|++||...+...+ ....|..+
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~----------~~~~Y~as 176 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP----------AFSVYAAS 176 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT----------TCHHHHHH
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC----------CchHHHHH
Confidence 99999872 233444444432 445899999977542211 11235599
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc------hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
|+....+.+ .+|+++..+.||.+..|..... ....+...+....|+. -+..++|+|++
T Consensus 177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~ 247 (273)
T 4fgs_A 177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG---------RVGRAEEVAAA 247 (273)
T ss_dssp HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS---------SCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence 998887653 4689999999999987642111 1112233333332321 23458999999
Q ss_pred HHHHhcCC--CCCCceEEecCCc
Q 022578 199 FVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++.++.+. ...|+.+.+.||.
T Consensus 248 v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 248 ALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhCchhcCccCCeEeECcCh
Confidence 99998753 3468899998874
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.4e-14 Score=117.02 Aligned_cols=195 Identities=14% Similarity=0.130 Sum_probs=132.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||..+++.|+++|++|.+.+|+.+...+. ..++.+...++..+.+|++|++++++++++ .++|+
T Consensus 15 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~-----~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 89 (255)
T 4g81_D 15 TGSARGLGFAYAEGLAAAGARVILNDIRATLLAES-----VDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDI 89 (255)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHH-----HHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence 89999999999999999999999999987653221 112333346788999999999998887765 27999
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC---CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++ +.++..+. +..++|++||...+...+ ....|
T Consensus 90 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~----------~~~~Y 159 (255)
T 4g81_D 90 LINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP----------TVAPY 159 (255)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT----------TCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC----------CchhH
Confidence 99999972 2233 33444442 456999999987643211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|.....+.+ .+|+++..+.||.+..|...... -..+...+....|+. -+..++|+|++++
T Consensus 160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~pediA~~v~ 230 (255)
T 4g81_D 160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQ---------RWGRPEELIGTAI 230 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTC---------SCBCGGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCC---------CCcCHHHHHHHHH
Confidence 589998877653 57899999999999876321000 011222222222221 2345899999999
Q ss_pred HHhcCC--CCCCceEEecCCc
Q 022578 201 QVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~ 219 (295)
.++.+. ...|+.+.+.||-
T Consensus 231 fL~S~~a~~iTG~~i~VDGG~ 251 (255)
T 4g81_D 231 FLSSKASDYINGQIIYVDGGW 251 (255)
T ss_dssp HHHSGGGTTCCSCEEEESTTG
T ss_pred HHhCchhCCCcCCEEEECCCe
Confidence 998653 3468899998873
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=8.1e-14 Score=114.13 Aligned_cols=182 Identities=15% Similarity=0.122 Sum_probs=121.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecC--CChHHHHHhhhcC-----C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDR--KDYDFVKSSLSAK-----G 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~--~~~~~~~~~~~~~-----~ 72 (295)
|||+|+||.+++++|+++|++|++++|+........ .++... ..++.++.+|+ ++.+++.++++.. .
T Consensus 20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~ 94 (247)
T 3i1j_A 20 TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVS-----DQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR 94 (247)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHH-----HHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence 799999999999999999999999999876532111 111111 14677888888 8888888777643 8
Q ss_pred CcEEEEcccCC---------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGRE---------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 73 ~d~vi~~a~~~---------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+|++||+||.. ..++.++++++ + +..++|++||...+.... ..
T Consensus 95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~ 164 (247)
T 3i1j_A 95 LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRA----------NW 164 (247)
T ss_dssp CSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCT----------TC
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCC----------Cc
Confidence 99999999862 22344444443 4 567999999977643211 11
Q ss_pred CccchhhHHHHHHhh-------h-cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~-~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|...+.+.+ . .++++..++||.+..+ +........ ....+..++|+|+
T Consensus 165 ~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~p~dva~ 226 (247)
T 3i1j_A 165 GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG---------MRAQAYPDE---------NPLNNPAPEDIMP 226 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH---------HHHHHSTTS---------CGGGSCCGGGGTH
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc---------cchhccccc---------CccCCCCHHHHHH
Confidence 234599999887763 2 5788999999987664 111111111 1123466899999
Q ss_pred HHHHHhcCC--CCCCceEEe
Q 022578 198 AFVQVLGNE--KASRQVFNI 215 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i 215 (295)
+++.++.+. ...|+.+++
T Consensus 227 ~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 227 VYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp HHHHHHSGGGTTCCSCEEEC
T ss_pred HHHHHhCchhccccCeeecC
Confidence 999998753 235666553
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=111.96 Aligned_cols=193 Identities=18% Similarity=0.153 Sum_probs=132.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||++-||..+++.|+++|.+|.+.+|+..+.. ...+.+...++..+.+|++|+++++.+++..++|++||+|
T Consensus 15 TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-------~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA 87 (247)
T 4hp8_A 15 TGANTGLGQAIAVGLAAAGAEVVCAARRAPDET-------LDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA 87 (247)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred eCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHH-------HHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence 899999999999999999999999999764311 1223444567899999999999999988877899999999
Q ss_pred cCC--------------------hhcH----HHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhH
Q 022578 81 GRE--------------------ADEV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL 133 (295)
Q Consensus 81 ~~~--------------------~~~~----~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~ 133 (295)
|.. ..++ +..+..+. + ..++|++||...+.... ....|..+|.
T Consensus 88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~----------~~~~Y~asKa 157 (247)
T 4hp8_A 88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI----------RVPSYTAAKH 157 (247)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS----------SCHHHHHHHH
T ss_pred CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC----------CChHHHHHHH
Confidence 972 2233 33333332 3 46999999987642211 1123459999
Q ss_pred HHHHHh-------hhcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 022578 134 NTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205 (295)
Q Consensus 134 ~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~ 205 (295)
....+. ..+|+++..+.||.+..|...... -....+.+.+..|+. -+..++|+|.+++.++.+
T Consensus 158 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~v~fLaSd 228 (247)
T 4hp8_A 158 GVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG---------RWGHSEDIAGAAVFLSSA 228 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS---------SCBCTHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhCc
Confidence 887765 357899999999998876321000 011122222332221 234589999999999875
Q ss_pred CC--CCCceEEecCCc
Q 022578 206 EK--ASRQVFNISGEK 219 (295)
Q Consensus 206 ~~--~~~~~~~i~~~~ 219 (295)
.. ..|+.+.+.+|-
T Consensus 229 ~a~~iTG~~i~VDGG~ 244 (247)
T 4hp8_A 229 AADYVHGAILNVDGGW 244 (247)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred hhcCCcCCeEEECccc
Confidence 33 368899998873
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.50 E-value=7.5e-14 Score=115.88 Aligned_cols=194 Identities=15% Similarity=0.074 Sum_probs=125.8
Q ss_pred CCc--CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-------
Q 022578 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------- 71 (295)
Q Consensus 1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~------- 71 (295)
||| +|.||.+++++|+++|++|++++|+......... .+...++.++.+|++|++++.+++++.
T Consensus 13 TGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 13 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT-------DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp CCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH-------TTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred ECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH-------HhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 788 9999999999999999999999998754211000 111246889999999999998888753
Q ss_pred -CCcEEEEcccCCh-------------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCC
Q 022578 72 -GFDVVYDINGREA-------------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETD 121 (295)
Q Consensus 72 -~~d~vi~~a~~~~-------------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~ 121 (295)
++|++||+||... .++.++++++. ...++|++||...++.
T Consensus 86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~---------- 155 (269)
T 2h7i_A 86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM---------- 155 (269)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC----------
T ss_pred CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc----------
Confidence 7999999998532 12334455543 2259999998764211
Q ss_pred CCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCC-------CchH----HHHHHHHHcCCCcccCCCC
Q 022578 122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-------NPVE----EWFFHRLKAGRPIPIPGSG 183 (295)
Q Consensus 122 ~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~-------~~~~----~~~~~~~~~~~~~~~~~~~ 183 (295)
.....|..+|+..+.+.+ ..|+++..++||.+..+... .... ..+........+. +
T Consensus 156 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~-- 229 (269)
T 2h7i_A 156 -PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---G-- 229 (269)
T ss_dssp -TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---C--
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc---c--
Confidence 011224489999887753 35899999999988765210 0000 0001111111111 1
Q ss_pred CceeeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCcc
Q 022578 184 IQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 184 ~~~~~~i~~~D~a~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
+.+..++|+|++++.++.... ..|+.+.+.++..
T Consensus 230 ---rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 265 (269)
T 2h7i_A 230 ---WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH 265 (269)
T ss_dssp ---CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred ---cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence 024568999999999997532 3678899888743
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=5.8e-13 Score=109.52 Aligned_cols=185 Identities=15% Similarity=0.149 Sum_probs=124.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||.++++.|+++|++|++.+|+..+.. .....+.+|++++++++.+++. -.+|+
T Consensus 17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 81 (261)
T 4h15_A 17 TAGTKGAGAATVSLFLELGAQVLTTARARPEGL---------------PEELFVEADLTTKEGCAIVAEATRQRLGGVDV 81 (261)
T ss_dssp SCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred eccCcHHHHHHHHHHHHcCCEEEEEECCchhCC---------------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 899999999999999999999999999765421 2344789999999888877764 27999
Q ss_pred EEEcccCC----------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE----------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~----------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||+||.. ..+ ++.++..+. +..++|++||...+... .....
T Consensus 82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~----------~~~~~ 151 (261)
T 4h15_A 82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL----------PESTT 151 (261)
T ss_dssp EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTTCH
T ss_pred EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC----------CCccH
Confidence 99998852 112 333444443 66799999997753211 01123
Q ss_pred cc-hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-------------hHHHHHHHHHcCCCcccCCCCCce
Q 022578 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-------------VEEWFFHRLKAGRPIPIPGSGIQV 186 (295)
Q Consensus 128 ~~-~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 186 (295)
+| .+|...+.+.+ .+|+++..+.||.+-.+..... ....+........|+
T Consensus 152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------- 222 (261)
T 4h15_A 152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL--------- 222 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT---------
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC---------
Confidence 45 89998887653 4789999999999876521000 000011111111111
Q ss_pred eeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 022578 187 TQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 187 ~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
.-+..++|+|++++.++.+. ...|+.+.+.||-
T Consensus 223 gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 223 GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 12466999999999998653 2468899998874
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.50 E-value=5.3e-13 Score=109.83 Aligned_cols=195 Identities=10% Similarity=0.075 Sum_probs=129.4
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhc-----CC
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG 72 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-----~~ 72 (295)
|||+| -||..+++.|+++|++|.+.+|+.....+. ...+.+. ..++.++.+|+++++++.+++++ -+
T Consensus 12 TGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (256)
T 4fs3_A 12 MGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKEL-----EKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGN 86 (256)
T ss_dssp ECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHH-----HHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred ECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 68876 899999999999999999999987653211 1111222 24688999999999888877754 38
Q ss_pred CcEEEEcccCChh------------------------cHHHHH----HhCCCCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGREAD------------------------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 73 ~d~vi~~a~~~~~------------------------~~~~ll----~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
+|++||++|.... +...+. ..+++..++|++||....... ..
T Consensus 87 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~----------~~ 156 (256)
T 4fs3_A 87 IDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV----------QN 156 (256)
T ss_dssp CSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC----------TT
T ss_pred CCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc----------cc
Confidence 9999999986210 111111 112244689999997753211 11
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|...+.+.+ .+|+++..+.||.+-.+.... .......+.+....|+. -+..++|+|
T Consensus 157 ~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~peevA 227 (256)
T 4fs3_A 157 YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK---------RNVDQVEVG 227 (256)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS---------SCCCHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence 1234489998877653 478999999999988764321 11233444444433332 124589999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++++.++.+. ...|+.+.+.||-
T Consensus 228 ~~v~fL~Sd~a~~iTG~~i~VDGG~ 252 (256)
T 4fs3_A 228 KTAAYLLSDLSSGVTGENIHVDSGF 252 (256)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCchhcCccCCEEEECcCH
Confidence 9999998653 2468899998873
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=4e-13 Score=110.19 Aligned_cols=195 Identities=17% Similarity=0.159 Sum_probs=132.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||..+++.|+++|.+|.+.+|+.+... . ..++.+...++.++.+|++|++++++++++ -.+|+
T Consensus 13 TGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi 86 (258)
T 4gkb_A 13 TGGASGIGGAISMRLAEERAIPVVFARHAPDGA-F-----LDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG 86 (258)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-H-----HHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-H-----HHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999876521 1 112344456899999999999888877765 38999
Q ss_pred EEEcccCC-------------------hhc----HHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGRE-------------------ADE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~-------------------~~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||+||.. ..+ ++..+..++ +..++|++||...+...+ ....|..+
T Consensus 87 LVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~----------~~~~Y~as 156 (258)
T 4gkb_A 87 LVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG----------NTSGYCAS 156 (258)
T ss_dssp EEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS----------SCHHHHHH
T ss_pred EEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC----------CchHHHHH
Confidence 99999872 122 233333444 447999999987643221 11234589
Q ss_pred hHHHHHHh-------hhcCCcEEEeccCeeecCCCCCch-----HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 132 KLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 132 k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|...+.+. ..+|+++..+.||.+..|...... ............|+ + .-+..++|+|+++
T Consensus 157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~g~peeiA~~v 228 (258)
T 4gkb_A 157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRFTTPDEIADTA 228 (258)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCCcCHHHHHHHH
Confidence 99888765 357899999999999877432110 01112222222221 1 1245699999999
Q ss_pred HHHhcCCC--CCCceEEecCCc
Q 022578 200 VQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i~~~~ 219 (295)
+.++.+.. ..|+.+.+.||-
T Consensus 229 ~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 229 VFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp HHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhCchhcCccCCeEEECCCc
Confidence 99987532 478899998874
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.48 E-value=8.1e-14 Score=123.69 Aligned_cols=192 Identities=16% Similarity=0.123 Sum_probs=126.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC------CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~------~~d 74 (295)
|||+|.||..++++|+++|++|++++|+..... + ..... ..++.++.+|++|.+++++++++. .+|
T Consensus 219 TGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~--l-----~~~~~-~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id 290 (454)
T 3u0b_A 219 TGAARGIGATIAEVFARDGATVVAIDVDGAAED--L-----KRVAD-KVGGTALTLDVTADDAVDKITAHVTEHHGGKVD 290 (454)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH--H-----HHHHH-HHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred eCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH--H-----HHHHH-HcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence 799999999999999999999999998653310 0 00011 125679999999999988887642 499
Q ss_pred EEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+|||+||.. ..++.++.+++ . +..+||++||...+.... ....|
T Consensus 291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~----------g~~~Y 360 (454)
T 3u0b_A 291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR----------GQTNY 360 (454)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT----------TCHHH
T ss_pred EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC----------CCHHH
Confidence 999999872 33455555553 2 567999999977653321 12235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+.+ ..|++++.+.||.+..+..... ............+ ...+..++|+|++++.
T Consensus 361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~---------l~r~g~pedvA~~v~f 430 (454)
T 3u0b_A 361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PLATREVGRRLNS---------LFQGGQPVDVAELIAY 430 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSBT---------TSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-chhhHHHHHhhcc---------ccCCCCHHHHHHHHHH
Confidence 589997776652 4689999999999987732110 0000000011111 1123578999999999
Q ss_pred HhcCC--CCCCceEEecCCcc
Q 022578 202 VLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~ 220 (295)
++... ...|+.++++++..
T Consensus 431 L~s~~a~~itG~~i~vdGG~~ 451 (454)
T 3u0b_A 431 FASPASNAVTGNTIRVCGQAM 451 (454)
T ss_dssp HHCGGGTTCCSCEEEESSSBS
T ss_pred HhCCccCCCCCcEEEECCccc
Confidence 98753 34688999988753
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.46 E-value=8.2e-13 Score=111.74 Aligned_cols=187 Identities=15% Similarity=0.105 Sum_probs=120.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCCh-HHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY-DFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~-~~~~~~~~~-----~~~ 73 (295)
|||+|+||.+++++|+++|++|++++|+..+..+.. .++.+. ..++.++.+|++|. +++..+++. ..+
T Consensus 18 TGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~i 92 (311)
T 3o26_A 18 TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAV-----EKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKL 92 (311)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSC
T ss_pred ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999999999976532111 111111 24689999999998 777766653 289
Q ss_pred cEEEEcccCC--------------------------------------------------hhcHHHHHH----hCC--CC
Q 022578 74 DVVYDINGRE--------------------------------------------------ADEVEPILD----ALP--NL 97 (295)
Q Consensus 74 d~vi~~a~~~--------------------------------------------------~~~~~~ll~----~~~--~~ 97 (295)
|++||+||.. ..++.++++ .++ +.
T Consensus 93 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~ 172 (311)
T 3o26_A 93 DILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS 172 (311)
T ss_dssp CEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred CEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCC
Confidence 9999999853 112333333 333 56
Q ss_pred CcEEEeeccccccCCCC--------------------------------CCCCCCCCCCCCc-cchhhHHHHHHhhh---
Q 022578 98 EQFIYCSSAGVYLKSDL--------------------------------LPHCETDTVDPKS-RHKGKLNTESVLES--- 141 (295)
Q Consensus 98 ~~~i~~Ss~~v~~~~~~--------------------------------~~~~e~~~~~p~~-~~~~k~~~E~~~~~--- 141 (295)
.++|++||...+..... ....+.....+.. |..+|+..+.+.+.
T Consensus 173 ~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~ 252 (311)
T 3o26_A 173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN 252 (311)
T ss_dssp CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHh
Confidence 79999999776432110 0000111111222 45999999887632
Q ss_pred --cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC-CCceEEecC
Q 022578 142 --KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-SRQVFNISG 217 (295)
Q Consensus 142 --~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~-~~~~~~i~~ 217 (295)
.++++..+.||.+..+-.. + ......++.++.++.++..+.. .++.|..++
T Consensus 253 e~~~i~v~~v~PG~v~T~~~~-------------~------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s 306 (311)
T 3o26_A 253 KIPKFQVNCVCPGLVKTEMNY-------------G------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDCS 306 (311)
T ss_dssp HCTTSEEEEECCCSBCSGGGT-------------T------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred hcCCceEEEecCCceecCCcC-------------C------------CCCCCHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence 3689999999998776210 0 0124688999999998876433 334454444
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.44 E-value=3.6e-13 Score=114.84 Aligned_cols=143 Identities=16% Similarity=0.103 Sum_probs=103.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc------cCCeEEEEecCCChHHHHHhhhcC---
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF------SSKILHLKGDRKDYDFVKSSLSAK--- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~--- 71 (295)
|||+|+||.+++++|+++|++|+++.|+....... ...+... ..++.++.+|++|.+++.+++++.
T Consensus 8 TGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g 82 (327)
T 1jtv_A 8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ-----GRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (327)
T ss_dssp SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT-----HHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred ECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHH-----HHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence 89999999999999999999999888875542211 0111111 246899999999999999998842
Q ss_pred CCcEEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 72 GFDVVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 72 ~~d~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
.+|++||+||.. ..++.++++++ . +..+||++||...+.... ..
T Consensus 83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~----------~~ 152 (327)
T 1jtv_A 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP----------FN 152 (327)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT----------TC
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCC----------CC
Confidence 599999999852 22445555553 3 678999999987653211 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCC
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~ 158 (295)
..|..+|...+.+.+ ..|+++++++||.+..+.
T Consensus 153 ~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 153 DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 234599999987763 368999999999998874
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.43 E-value=2e-12 Score=105.70 Aligned_cols=189 Identities=13% Similarity=0.127 Sum_probs=116.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEE-e--cCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHH-HhhhcC-CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLF-T--RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-SSLSAK-GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-~~~~~~-~~d~ 75 (295)
|||+|+||.+++++|+++|++|+++ + |+++...... ... .+.++. |..+.+.+. ++.+.. ++|+
T Consensus 7 TGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~--------~~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~ 75 (244)
T 1zmo_A 7 THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE--------SEN-PGTIAL--AEQKPERLVDATLQHGEAIDT 75 (244)
T ss_dssp SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH--------HHS-TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHH--------HHh-CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence 7999999999999999999999999 5 8765422110 111 233332 444443332 222222 7899
Q ss_pred EEEcccCChh-----------------------cHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 76 VYDINGREAD-----------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 76 vi~~a~~~~~-----------------------~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
+||+||.... ++.++++++ . +..++|++||...+.... ...
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~ 145 (244)
T 1zmo_A 76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA----------YNP 145 (244)
T ss_dssp EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT----------TCT
T ss_pred EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC----------Cch
Confidence 9999985321 233344433 2 567999999987754211 112
Q ss_pred ccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCC--CchH-HHHHHHHHc-CCCcccCCCCCceeeeeeHHHH
Q 022578 127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY--NPVE-EWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 127 ~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
.|..+|...+.+.+ ..+++++.++||.+..+... .... ......... ..+. ..+..++|+
T Consensus 146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pe~v 216 (244)
T 1zmo_A 146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL---------GRLGRPDEM 216 (244)
T ss_dssp THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTT---------CSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCC---------CCCcCHHHH
Confidence 35599999887753 35899999999998877420 0000 001111111 1111 135679999
Q ss_pred HHHHHHHhcCCC--CCCceEEecCCc
Q 022578 196 ARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 196 a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
|++++.++.... ..|+.+.+.++.
T Consensus 217 A~~v~~l~s~~~~~~tG~~i~vdgG~ 242 (244)
T 1zmo_A 217 GALITFLASRRAAPIVGQFFAFTGGY 242 (244)
T ss_dssp HHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred HHHHHHHcCccccCccCCEEEeCCCC
Confidence 999999987643 357888887763
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=7.3e-13 Score=109.26 Aligned_cols=195 Identities=14% Similarity=0.086 Sum_probs=118.4
Q ss_pred CCcCCcchHHHHHHHHH---CCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhcC----
Q 022578 1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK---- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~---- 71 (295)
|||+|.||.+++++|++ +|++|++++|+.+...... .++... ..++.++.+|++|++++.++++..
T Consensus 12 TGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (259)
T 1oaa_A 12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP 86 (259)
T ss_dssp SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred eCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence 79999999999999999 8999999999875522111 111111 246889999999999988877542
Q ss_pred ---CCc--EEEEcccCCh---------h--------------cHHHHHHh----CC-C---CCcEEEeeccccccCCCCC
Q 022578 72 ---GFD--VVYDINGREA---------D--------------EVEPILDA----LP-N---LEQFIYCSSAGVYLKSDLL 115 (295)
Q Consensus 72 ---~~d--~vi~~a~~~~---------~--------------~~~~ll~~----~~-~---~~~~i~~Ss~~v~~~~~~~ 115 (295)
.+| ++||+||... . ++.+++++ +. . ..++|++||...+....
T Consensus 87 ~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 164 (259)
T 1oaa_A 87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK-- 164 (259)
T ss_dssp CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT--
T ss_pred ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC--
Confidence 467 9999998521 1 12233333 33 2 25799999988753211
Q ss_pred CCCCCCCCCCCccchhhHHHHHHhhh-----cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeee
Q 022578 116 PHCETDTVDPKSRHKGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 116 ~~~e~~~~~p~~~~~~k~~~E~~~~~-----~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
....|..+|+..+.+.+. .++++..+.||.+-.+. ...+.....................+.
T Consensus 165 --------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~ 231 (259)
T 1oaa_A 165 --------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM-----QQLARETSKDPELRSKLQKLKSDGALV 231 (259)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH-----HHHHHHHCSCHHHHHHHHHHHHTTCSB
T ss_pred --------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch-----HHHHhhccCChhHHHHHHHhhhcCCcC
Confidence 112345999999887642 24888899998876541 111110000000000000000012357
Q ss_pred eHHHHHHHHHHHhcCCC-CCCceEEe
Q 022578 191 HVKDLARAFVQVLGNEK-ASRQVFNI 215 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~~-~~~~~~~i 215 (295)
+++|+|++++.++.... ..|+.+++
T Consensus 232 ~p~dvA~~v~~l~~~~~~itG~~i~v 257 (259)
T 1oaa_A 232 DCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp CHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred CHHHHHHHHHHHHhhccccCCcEEec
Confidence 89999999999886432 34555554
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.8e-12 Score=114.66 Aligned_cols=182 Identities=18% Similarity=0.149 Sum_probs=125.8
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~ 75 (295)
|||+|.||..++++|+++|+ +|+++.|+....... .....++.+...++.++.+|++|.+++..++++. .+|+
T Consensus 245 TGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~--~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~ 322 (496)
T 3mje_A 245 TGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGA--AELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTA 322 (496)
T ss_dssp ETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTH--HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEE
T ss_pred ECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHH--HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeE
Confidence 79999999999999999998 788888875431110 0011123333457999999999999999999753 5899
Q ss_pred EEEcccC---------------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 76 VYDINGR---------------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 76 vi~~a~~---------------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
|||+||. |..++.++.+++. ...+||++||...+-+..+ ...|..+|
T Consensus 323 vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g----------~~~YaAaK 392 (496)
T 3mje_A 323 VFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGG----------QPGYAAAN 392 (496)
T ss_dssp EEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTT----------CHHHHHHH
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCC----------cHHHHHHH
Confidence 9999986 3346777888876 6789999999665432211 12355899
Q ss_pred HHHHHHh---hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 022578 133 LNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 207 (295)
Q Consensus 133 ~~~E~~~---~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 207 (295)
...+.+. +..|++++.+.||.+.+.+.... ......+.. .....+..++.++++..++..+.
T Consensus 393 a~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~--~~~~~~l~~-----------~g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 393 AYLDALAEHRRSLGLTASSVAWGTWGEVGMATD--PEVHDRLVR-----------QGVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECEESSSCC--------CHHHHH-----------TTEEEECHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCeEEEEECCcccCCccccC--hHHHHHHHh-----------cCCCCCCHHHHHHHHHHHHcCCC
Confidence 9887765 46799999999999877654211 000111111 11345789999999999988654
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1e-12 Score=111.57 Aligned_cols=184 Identities=11% Similarity=0.059 Sum_probs=114.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCC----CchhhhhccCCeEEEEecCCChHHHHHhhhc-----C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~ 71 (295)
|||+|+||.++++.|+++|++|++.+|............ ...++... +. ...+|+.+.+++.++++. .
T Consensus 15 TGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~~-~~~~D~~~~~~~~~~~~~~~~~~g 91 (319)
T 1gz6_A 15 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GG-KAVANYDSVEAGEKLVKTALDTFG 91 (319)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TC-EEEEECCCGGGHHHHHHHHHHHTS
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--CC-eEEEeCCCHHHHHHHHHHHHHHcC
Confidence 799999999999999999999999876432100000000 00011111 11 235899998876665542 2
Q ss_pred CCcEEEEcccCC--------------------hhcHHHHHHh----CC--CCCcEEEeecccc-ccCCCCCCCCCCCCCC
Q 022578 72 GFDVVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVD 124 (295)
Q Consensus 72 ~~d~vi~~a~~~--------------------~~~~~~ll~~----~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~ 124 (295)
.+|++||+||.. ..++.+++++ ++ +..++|++||... ++.. .
T Consensus 92 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~-----------~ 160 (319)
T 1gz6_A 92 RIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-----------G 160 (319)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-----------C
Confidence 799999999852 2233344444 33 5679999999654 3321 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
...|..+|...+.+.+ ..|++++.++||.+ .+....... .....+++++|+|+
T Consensus 161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~-------------------~~~~~~~~p~dvA~ 220 (319)
T 1gz6_A 161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP-------------------EDLVEALKPEYVAP 220 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC-------------------HHHHHHSCGGGTHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC-------------------hhhhccCCHHHHHH
Confidence 2235599998887653 35899999999986 331100000 01123467899999
Q ss_pred HHHHHhcCCC-CCCceEEecCC
Q 022578 198 AFVQVLGNEK-ASRQVFNISGE 218 (295)
Q Consensus 198 ~i~~~~~~~~-~~~~~~~i~~~ 218 (295)
+++.++..+. ..|+.|++.++
T Consensus 221 ~~~~l~s~~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 221 LVLWLCHESCEENGGLFEVGAG 242 (319)
T ss_dssp HHHHHTSTTCCCCSCEEEEETT
T ss_pred HHHHHhCchhhcCCCEEEECCC
Confidence 9999987643 35777877655
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-13 Score=116.66 Aligned_cols=147 Identities=13% Similarity=0.113 Sum_probs=97.7
Q ss_pred CCcCCcchHHHHHHHHHCCC-------eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 73 (295)
|||+||||++++..|+++|+ +|+++++.+...... . ....+. ...+.++ +|+.+.+.+.++++ ++
T Consensus 10 tGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~-g--~~~dl~--~~~~~~~-~di~~~~~~~~a~~--~~ 81 (327)
T 1y7t_A 10 TGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALE-G--VVMELE--DCAFPLL-AGLEATDDPKVAFK--DA 81 (327)
T ss_dssp SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHH-H--HHHHHH--TTTCTTE-EEEEEESCHHHHTT--TC
T ss_pred ECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhcc-c--hhhhhh--ccccccc-CCeEeccChHHHhC--CC
Confidence 79999999999999999986 899998864210000 0 000000 0112233 57776667778888 99
Q ss_pred cEEEEcccC--------------ChhcHHHHHHhCC--C-CC-cEEEeecccc-ccCCCCCCCC-CCC-CCCCCc-cchh
Q 022578 74 DVVYDINGR--------------EADEVEPILDALP--N-LE-QFIYCSSAGV-YLKSDLLPHC-ETD-TVDPKS-RHKG 131 (295)
Q Consensus 74 d~vi~~a~~--------------~~~~~~~ll~~~~--~-~~-~~i~~Ss~~v-~~~~~~~~~~-e~~-~~~p~~-~~~~ 131 (295)
|+|||+||. |+.+++++++++. + .+ +++++|+..- .. +.. |.. ...|.. |..+
T Consensus 82 D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p~~~yg~t 156 (327)
T 1y7t_A 82 DYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNPRNFTAMT 156 (327)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCGGGEEECC
T ss_pred CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCChhheeccc
Confidence 999999986 4456888999987 4 44 7777776541 10 011 111 123333 4489
Q ss_pred hHHHHHHh----hhcCCcEEEeccCeeecCCCC
Q 022578 132 KLNTESVL----ESKGVNWTSLRPVYIYGPLNY 160 (295)
Q Consensus 132 k~~~E~~~----~~~~~~~~i~R~~~i~g~~~~ 160 (295)
|...|++. +..+++.+++|++++|||+..
T Consensus 157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred hHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 99998875 456999999999999999763
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-10 Score=98.27 Aligned_cols=199 Identities=9% Similarity=-0.040 Sum_probs=118.5
Q ss_pred CCcC--CcchHHHHHHHHHCCCeEEEEecCCCc-------cccCCCCCCchhhhhcc--CCeEEEEec--------CC--
Q 022578 1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAP-------IAQQLPGESDQEFAEFS--SKILHLKGD--------RK-- 59 (295)
Q Consensus 1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~--~~v~~~~~D--------~~-- 59 (295)
|||+ |+||.+++++|+++|++|++++|++.. ....+... .++.... .....+.+| +.
T Consensus 14 TGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dv~~D 91 (297)
T 1d7o_A 14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS--RVLPDGSLMEIKKVYPLDAVFDNPEDVPED 91 (297)
T ss_dssp ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG--GBCTTSSBCCEEEEEEECTTCCSGGGSCHH
T ss_pred ECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh--hhhccccccccccccccceeccchhhhhhh
Confidence 7998 999999999999999999999864210 00000000 0000000 002333443 22
Q ss_pred --C--------hHHHHHhhhc-----CCCcEEEEcccCC----------------------hhcHHHHHHhCC----CCC
Q 022578 60 --D--------YDFVKSSLSA-----KGFDVVYDINGRE----------------------ADEVEPILDALP----NLE 98 (295)
Q Consensus 60 --~--------~~~~~~~~~~-----~~~d~vi~~a~~~----------------------~~~~~~ll~~~~----~~~ 98 (295)
| +++++.+++. ..+|++||+||.. ..++.++++++. ...
T Consensus 92 v~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g 171 (297)
T 1d7o_A 92 VKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGG 171 (297)
T ss_dssp HHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred hhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCc
Confidence 1 3344444432 1799999999742 223445555543 236
Q ss_pred cEEEeeccccccCCCCCCCCCCCCCCC-CccchhhHHHHHHhh--------hcCCcEEEeccCeeecCCCCCc-hHHHHH
Q 022578 99 QFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNP-VEEWFF 168 (295)
Q Consensus 99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~--------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~ 168 (295)
++|++||...+.... .. ..|..+|+..+.+.+ ..|++++.++||.+.++..... ....+.
T Consensus 172 ~iv~isS~~~~~~~~----------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~ 241 (297)
T 1d7o_A 172 ASISLTYIASERIIP----------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI 241 (297)
T ss_dssp EEEEEECGGGTSCCT----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred eEEEEeccccccCCC----------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHH
Confidence 999999987643211 11 235599998887652 2689999999999999864321 222222
Q ss_pred HHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
.......+. ..+.+++|+|++++.++... ...|+.+++.++..
T Consensus 242 ~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~ 286 (297)
T 1d7o_A 242 EYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286 (297)
T ss_dssp HHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence 222222221 12457999999999998653 23688999988753
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-11 Score=111.18 Aligned_cols=200 Identities=15% Similarity=0.094 Sum_probs=127.1
Q ss_pred CCcCCcchHHHHHHHHHCCCe-EEEE-ecCCCccc--------cCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ-VTLF-TRGKAPIA--------QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~~~--------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 70 (295)
|||+|.||..++++|+++|++ |+++ +|++.... .........++.+...++.++.+|++|.+++..++++
T Consensus 257 TGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~ 336 (525)
T 3qp9_A 257 TGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAG 336 (525)
T ss_dssp SSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHT
T ss_pred ECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHH
Confidence 799999999999999999997 5555 67743200 0000001122333346799999999999999999985
Q ss_pred C----CCcEEEEcccC--------------------ChhcHHHHHHhCC------C-CCcEEEeeccccccCCCCCCCCC
Q 022578 71 K----GFDVVYDINGR--------------------EADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCE 119 (295)
Q Consensus 71 ~----~~d~vi~~a~~--------------------~~~~~~~ll~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e 119 (295)
. .+|+|||+||. |+.++.++.+++. + ..+||++||...+-+..
T Consensus 337 i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~------ 410 (525)
T 3qp9_A 337 VSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA------ 410 (525)
T ss_dssp SCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCT------
T ss_pred HHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCC------
Confidence 3 57999999986 2345666666643 2 68999999977643221
Q ss_pred CCCCCCCccchhhHHHHHHh---hhcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 120 TDTVDPKSRHKGKLNTESVL---ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 120 ~~~~~p~~~~~~k~~~E~~~---~~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
....|..+|...+.+. +..|++++.+.||.+ +-+.. ... ....+... + ...+..+++
T Consensus 411 ----g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~~~---~~~~~~~~------g-----~~~l~pee~ 471 (525)
T 3qp9_A 411 ----GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVTEGA---TGERLRRL------G-----LRPLAPATA 471 (525)
T ss_dssp ----TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGGSSH---HHHHHHHT------T-----BCCBCHHHH
T ss_pred ----CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccccccchh---hHHHHHhc------C-----CCCCCHHHH
Confidence 1233558999888876 346899999999988 22211 111 11111110 1 234779999
Q ss_pred HHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHH
Q 022578 196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA 231 (295)
Q Consensus 196 a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~ 231 (295)
++++..++..+.. ...+.. +.|..+...+.
T Consensus 472 a~~l~~~l~~~~~---~v~v~~---~dw~~~~~~~~ 501 (525)
T 3qp9_A 472 LTALDTALGHGDT---AVTIAD---VDWSSFAPGFT 501 (525)
T ss_dssp HHHHHHHHHHTCS---EEEECC---BCHHHHHHHHH
T ss_pred HHHHHHHHhCCCC---eEEEEe---CCHHHHHhhcc
Confidence 9999999986532 222222 45665555443
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.17 E-value=2.7e-10 Score=97.12 Aligned_cols=145 Identities=7% Similarity=-0.111 Sum_probs=92.7
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCC---------CccccCCCCCCchhhhhccCCeEEEEecCCCh--H-----
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGK---------APIAQQLPGESDQEFAEFSSKILHLKGDRKDY--D----- 62 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~----- 62 (295)
|||++ .||.+++++|+++|++|++.+|++ ++....... ..........+.++.+|+++. +
T Consensus 8 TGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~ 85 (329)
T 3lt0_A 8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDM--IIDKDKKMNILDMLPFDASFDTANDIDEE 85 (329)
T ss_dssp ECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGG--BCSSSCBCCEEEEEECCTTCSSGGGCCHH
T ss_pred ECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHH--HHhhcccccccccccccccccchhhhhhh
Confidence 68764 999999999999999999877664 110000000 000001113478888999877 6
Q ss_pred -------------HHHHhhhc-----CCCcEEEEcccCC----------------------hhcHHHHHHhC----CCCC
Q 022578 63 -------------FVKSSLSA-----KGFDVVYDINGRE----------------------ADEVEPILDAL----PNLE 98 (295)
Q Consensus 63 -------------~~~~~~~~-----~~~d~vi~~a~~~----------------------~~~~~~ll~~~----~~~~ 98 (295)
++.++++. ..+|++||+||.. ..++..+.+++ +...
T Consensus 86 ~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g 165 (329)
T 3lt0_A 86 TKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQS 165 (329)
T ss_dssp HHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred hcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC
Confidence 66665543 2799999999852 12333444443 3226
Q ss_pred cEEEeeccccccCCCCCCCCCCCCCCCC-ccchhhHHHHHHh-------hh-cCCcEEEeccCeeecC
Q 022578 99 QFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVL-------ES-KGVNWTSLRPVYIYGP 157 (295)
Q Consensus 99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~p~-~~~~~k~~~E~~~-------~~-~~~~~~i~R~~~i~g~ 157 (295)
++|++||...+.... ... .|..+|+..+.+. .. .++++..+.||.+..+
T Consensus 166 ~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 166 SIISLTYHASQKVVP----------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp EEEEEECGGGTSCCT----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred eEEEEeCccccCCCC----------cchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 999999987542211 111 4559999887765 24 6999999999998765
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.9e-09 Score=91.26 Aligned_cols=200 Identities=15% Similarity=0.034 Sum_probs=114.7
Q ss_pred CCc--CCcchHHHHHHHHHCCCeEEEEecCCC-------ccccCCCCCCchhhhhcc--CCeEEEEecC-----------
Q 022578 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-------PIAQQLPGESDQEFAEFS--SKILHLKGDR----------- 58 (295)
Q Consensus 1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~--~~v~~~~~D~----------- 58 (295)
||| +|.||.+++++|+++|++|++++|++. .....+.. ...+.... ..+.++.+|+
T Consensus 15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (315)
T 2o2s_A 15 AGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDE--DRKLPDGSLIEFAGVYPLDAAFDKPEDVPQD 92 (315)
T ss_dssp ECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHH--HHBCTTSCBCCCSCEEECCTTCSSTTSSCHH
T ss_pred eCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhh--hhhhhccccccccccccccccccccchhhhh
Confidence 687 899999999999999999999987531 00000000 00000000 0124444443
Q ss_pred -CC--------hHHHHHhhhc-----CCCcEEEEcccCC----------------------hhcHHHHHHhCC----CCC
Q 022578 59 -KD--------YDFVKSSLSA-----KGFDVVYDINGRE----------------------ADEVEPILDALP----NLE 98 (295)
Q Consensus 59 -~~--------~~~~~~~~~~-----~~~d~vi~~a~~~----------------------~~~~~~ll~~~~----~~~ 98 (295)
+| .+++..++++ ..+|++||+||.. ..++.++++++. ...
T Consensus 93 v~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g 172 (315)
T 2o2s_A 93 IKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGG 172 (315)
T ss_dssp HHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEE
T ss_pred hhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC
Confidence 22 3344444432 2799999999842 123445555543 226
Q ss_pred cEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh--------hcCCcEEEeccCeeecCCCC-------Cch
Q 022578 99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNY-------NPV 163 (295)
Q Consensus 99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~--------~~~~~~~i~R~~~i~g~~~~-------~~~ 163 (295)
++|++||...+....+ ....|..+|+..+.+.+ ..|+++..++||.+..+... ..+
T Consensus 173 ~Iv~isS~~~~~~~~~---------~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~ 243 (315)
T 2o2s_A 173 SAVTLSYLAAERVVPG---------YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSF 243 (315)
T ss_dssp EEEEEEEGGGTSCCTT---------CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCH
T ss_pred EEEEEecccccccCCC---------ccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchh
Confidence 9999999876432111 01235599998877652 26899999999998765100 001
Q ss_pred HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 164 EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
...+........+. ..+..++|+|++++.++... ...|+.+.+.++..
T Consensus 244 ~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 293 (315)
T 2o2s_A 244 IDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH 293 (315)
T ss_dssp HHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence 11111111111111 12457999999999998752 24688898888753
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.6e-11 Score=110.02 Aligned_cols=204 Identities=12% Similarity=0.025 Sum_probs=118.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCC----chhhhhccCCeEEEEecCCChHHHHHhhhcC-----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES----DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----- 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----- 71 (295)
|||+|.||.+++++|+++|++|++++|............. ..++... +. .+.+|+.+.+++.++++..
T Consensus 25 TGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~--~~-~~~~D~~d~~~~~~~~~~~~~~~g 101 (613)
T 3oml_A 25 TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA--GG-EAVADYNSVIDGAKVIETAIKAFG 101 (613)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT--TC-CEEECCCCGGGHHHHHC-------
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh--CC-eEEEEeCCHHHHHHHHHHHHHHCC
Confidence 7999999999999999999999999883321100000000 0111111 12 2348999988888777642
Q ss_pred CCcEEEEcccCC--------------------hhcHHHHHHhC----C--CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 72 GFDVVYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 72 ~~d~vi~~a~~~--------------------~~~~~~ll~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
.+|++||+||.. ..++.++++++ + +..++|++||...+.... ..
T Consensus 102 ~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~----------~~ 171 (613)
T 3oml_A 102 RVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF----------GQ 171 (613)
T ss_dssp ---CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT----------TC
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC----------CC
Confidence 689999999962 22344445443 3 557999999976542211 12
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..|..+|+..+.+.+ ..|+++..+.||.+-... .+. . .......+.++|+|.+
T Consensus 172 ~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~--------------~~~-~-----~~~~~~~~~pedvA~~ 231 (613)
T 3oml_A 172 VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMT--------------EGI-L-----PDILFNELKPKLIAPV 231 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------CCC-C-----CHHHHTTCCGGGTHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhh--------------hhc-c-----chhhhhcCCHHHHHHH
Confidence 235599998887653 468999999998531110 000 0 0111223478999999
Q ss_pred HHHHhcCCC-CCCceEEecCC--------------------cccCHHHHHHHHHHHhCCC
Q 022578 199 FVQVLGNEK-ASRQVFNISGE--------------------KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 199 i~~~~~~~~-~~~~~~~i~~~--------------------~~~t~~e~~~~i~~~~g~~ 237 (295)
++.++.... ..|+.+++.++ ...+.+++.+.+.+..+..
T Consensus 232 v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~ 291 (613)
T 3oml_A 232 VAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMS 291 (613)
T ss_dssp HHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCT
T ss_pred HHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccc
Confidence 999887642 35677776543 1246677777777776654
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.05 E-value=6.4e-10 Score=94.40 Aligned_cols=205 Identities=12% Similarity=-0.006 Sum_probs=100.5
Q ss_pred CCc--CCcchHHHHHHHHHCCCeEEEEecCC-----------CccccC--CCC----CCchhhhhccC---CeEEEEecC
Q 022578 1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGK-----------APIAQQ--LPG----ESDQEFAEFSS---KILHLKGDR 58 (295)
Q Consensus 1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~--~~~----~~~~~~~~~~~---~v~~~~~D~ 58 (295)
||| +|.||.++++.|+++|++|++++|++ ...... +.. ....++.+... ...++.+|+
T Consensus 15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 94 (319)
T 2ptg_A 15 AGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDA 94 (319)
T ss_dssp ECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEEECCT
T ss_pred eCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccccccc
Confidence 687 89999999999999999999998642 111100 000 00000110000 134454443
Q ss_pred ------------CC--------hHHHHHhhhc-----CCCcEEEEcccCC----------------------hhcHHHHH
Q 022578 59 ------------KD--------YDFVKSSLSA-----KGFDVVYDINGRE----------------------ADEVEPIL 91 (295)
Q Consensus 59 ------------~~--------~~~~~~~~~~-----~~~d~vi~~a~~~----------------------~~~~~~ll 91 (295)
++ .+++..++++ ..+|++||+||.. ..++.+++
T Consensus 95 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 174 (319)
T 2ptg_A 95 VFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLL 174 (319)
T ss_dssp TCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred cccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHH
Confidence 22 2244444432 2799999998742 12344455
Q ss_pred HhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCC-CccchhhHHHHHHhh-------h-cCCcEEEeccCeeecCC
Q 022578 92 DALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPL 158 (295)
Q Consensus 92 ~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~-------~-~~~~~~i~R~~~i~g~~ 158 (295)
+++. ...++|++||...+.... .. ..|..+|+..+.+.+ . .|+++..++||.+..+.
T Consensus 175 ~~~~~~m~~~g~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~ 244 (319)
T 2ptg_A 175 QHFLPLMKEGGSALALSYIASEKVIP----------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA 244 (319)
T ss_dssp HHHGGGEEEEEEEEEEEECC----------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred HHHHHHHhcCceEEEEeccccccccC----------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence 5543 236999999987542211 11 235588888776652 2 68999999999988763
Q ss_pred CCCch---HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 159 NYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 159 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
..... ...+...... ..........+..++|+|++++.++... ...|+.+.+.++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~-----~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~ 306 (319)
T 2ptg_A 245 ASAIGKAGDKTFIDLAID-----YSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH 306 (319)
T ss_dssp ---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred hhhcccccchhhHHHHHH-----HHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence 21100 0000000000 0000001123467999999999998752 34688899988753
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.4e-09 Score=101.24 Aligned_cols=183 Identities=17% Similarity=0.146 Sum_probs=123.5
Q ss_pred CCcCCcchHHHHHHHH-HCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC----CCc
Q 022578 1 MGGTRFIGVFLSRLLV-KEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d 74 (295)
|||+|.||..++++|. ++|. +|++++|+........ ....++.+...++.++.+|++|.+++.+++++. .+|
T Consensus 536 tGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~--~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id 613 (795)
T 3slk_A 536 TGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAA--ELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLT 613 (795)
T ss_dssp ETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHH--HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEE
T ss_pred ccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHH--HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCE
Confidence 6999999999999999 7898 5888999854321100 001122333457899999999999999998753 589
Q ss_pred EEEEcccC--------------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhH
Q 022578 75 VVYDINGR--------------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL 133 (295)
Q Consensus 75 ~vi~~a~~--------------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~ 133 (295)
+|||+||. |..++.++.+++. .. +||++||...+-+..+ ...|..+|.
T Consensus 614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~g----------~~~YaAaka 682 (795)
T 3slk_A 614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSGG----------QGNYAAANS 682 (795)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCSS----------CHHHHHHHH
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCCC----------CHHHHHHHH
Confidence 99999986 4567888888877 55 9999999776432211 233558888
Q ss_pred HHHHHh---hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 022578 134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 207 (295)
Q Consensus 134 ~~E~~~---~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 207 (295)
..+.+. +..|++++.+.||.+-.++............+... ....+..++....+..++..+.
T Consensus 683 ~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~-----------g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 683 FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARS-----------GLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHT-----------TBCCCCHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhc-----------CCCCCCHHHHHHHHHHHHhCCC
Confidence 776654 46799999999998765532110001111111111 1233668888888888887654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.89 E-value=8.3e-09 Score=94.71 Aligned_cols=200 Identities=13% Similarity=0.108 Sum_probs=125.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecC-CChHHH-HHhhhc-CCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KDYDFV-KSSLSA-KGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~-~~~~~~-~~~~~~-~~~d~vi 77 (295)
|||++-||..+++.|+++|++|++.+|..... ...++.+...++..+.+|+ .+.+.+ +.+.++ -.+|++|
T Consensus 328 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~-------~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV 400 (604)
T 2et6_A 328 TGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK-------TVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV 400 (604)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH-------HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred ECcchHHHHHHHHHHHHCCCEEEEEeCccHHH-------HHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence 79999999999999999999999987632110 0112222223466677788 554433 223222 2799999
Q ss_pred EcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 78 DINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 78 ~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
|+||.. ..+ ++.++..++ +..++|++||...+-... ....|..+
T Consensus 401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~----------~~~~Y~as 470 (604)
T 2et6_A 401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF----------GQANYSSS 470 (604)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT----------TBHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC----------CChhHHHH
Confidence 999962 122 333444443 456999999976432111 11235589
Q ss_pred hHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|+....+. ..+|+++..+.||. ..+ ...... ... ......++|+|.+++.++.
T Consensus 471 Kaal~~lt~~la~El~~~gIrVn~v~PG~-~T~-----m~~~~~----~~~----------~~~~~~pe~vA~~v~~L~s 530 (604)
T 2et6_A 471 KAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA-----MTLSIM----REQ----------DKNLYHADQVAPLLVYLGT 530 (604)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC-----C-----------------------CCSSCGGGTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc-----cccccC----chh----------hccCCCHHHHHHHHHHHhC
Confidence 99887664 35789999999983 222 111000 000 0123478999999999886
Q ss_pred CCC-CCCceEEecCC-----------------cccCHHHHHHHHHHHhCCC
Q 022578 205 NEK-ASRQVFNISGE-----------------KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 205 ~~~-~~~~~~~i~~~-----------------~~~t~~e~~~~i~~~~g~~ 237 (295)
... ..|+.+.+.++ ..++.+++.+.+.+.....
T Consensus 531 ~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 581 (604)
T 2et6_A 531 DDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT 581 (604)
T ss_dssp TTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred CccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence 532 46778887765 2368899999998887765
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.7e-09 Score=103.84 Aligned_cols=203 Identities=11% Similarity=0.074 Sum_probs=119.5
Q ss_pred CCcCCc-chHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc--------
Q 022578 1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------- 70 (295)
Q Consensus 1 tGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------- 70 (295)
|||+|. ||.++++.|+++|++|++++ |+.......... ....+.....++.++.+|++|.+++..+++.
T Consensus 482 TGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~e-L~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~ 560 (1688)
T 2pff_A 482 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQS-IYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG 560 (1688)
T ss_dssp CSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHH-TTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSS
T ss_pred ECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHH-HHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhcccc
Confidence 799998 99999999999999999984 554432111000 0000001124688999999999988887753
Q ss_pred -C--CCcEEEEcccCChh-----------------------cHHHHHHhC------C--CCCcEEEeeccccccCCCCCC
Q 022578 71 -K--GFDVVYDINGREAD-----------------------EVEPILDAL------P--NLEQFIYCSSAGVYLKSDLLP 116 (295)
Q Consensus 71 -~--~~d~vi~~a~~~~~-----------------------~~~~ll~~~------~--~~~~~i~~Ss~~v~~~~~~~~ 116 (295)
. .+|++||+||.... ++.++++++ . +..+||++||...+..
T Consensus 561 GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G----- 635 (1688)
T 2pff_A 561 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG----- 635 (1688)
T ss_dssp SCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-----
T ss_pred ccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-----
Confidence 2 49999999986211 122233333 2 2358999999764321
Q ss_pred CCCCCCCCCCccchhhHHHHHHh-h----h--cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeee
Q 022578 117 HCETDTVDPKSRHKGKLNTESVL-E----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL 189 (295)
Q Consensus 117 ~~e~~~~~p~~~~~~k~~~E~~~-~----~--~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
....|..+|+..+.+. + + ..++++.+.||++.+....... .. ..... . ......
T Consensus 636 -------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~------e~-~~~~l---~--~iplR~ 696 (1688)
T 2pff_A 636 -------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN------NI-IAEGI---E--KMGVRT 696 (1688)
T ss_dssp -------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT------TT-CSTTT---S--SSSCCC
T ss_pred -------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc------hH-HHHHH---H--hCCCCC
Confidence 1234569999998872 1 1 1278888999988742211100 00 00000 0 011123
Q ss_pred eeHHHHHHHHHHHhcCCC---CCCceEEec--CCcc--cCHHHHHH
Q 022578 190 GHVKDLARAFVQVLGNEK---ASRQVFNIS--GEKY--VTFDGLAR 228 (295)
Q Consensus 190 i~~~D~a~~i~~~~~~~~---~~~~~~~i~--~~~~--~t~~e~~~ 228 (295)
..++|+|++++.++.... ..|+.+.+. ++.. ..+.++..
T Consensus 697 ~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella 742 (1688)
T 2pff_A 697 FSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTA 742 (1688)
T ss_dssp CCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHH
Confidence 478999999999987651 246666553 4422 24444443
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.2e-09 Score=76.09 Aligned_cols=87 Identities=22% Similarity=0.185 Sum_probs=69.2
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+|+ |++|+.+++.|.+.| ++|++++|++.+..... ..++.++.+|+.+.+.+.++++ ++|+|||+
T Consensus 11 ~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~ 76 (118)
T 3ic5_A 11 VGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----------RMGVATKQVDAKDEAGLAKALG--GFDAVISA 76 (118)
T ss_dssp ECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----------TTTCEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred ECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----------hCCCcEEEecCCCHHHHHHHHc--CCCEEEEC
Confidence 588 999999999999999 99999999876632111 2478889999999999999998 99999999
Q ss_pred ccCChhcHHHHHHhCC--CCCcEEEee
Q 022578 80 NGREADEVEPILDALP--NLEQFIYCS 104 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~--~~~~~i~~S 104 (295)
++. ....++++++. ++ +++.+|
T Consensus 77 ~~~--~~~~~~~~~~~~~g~-~~~~~~ 100 (118)
T 3ic5_A 77 APF--FLTPIIAKAAKAAGA-HYFDLT 100 (118)
T ss_dssp SCG--GGHHHHHHHHHHTTC-EEECCC
T ss_pred CCc--hhhHHHHHHHHHhCC-CEEEec
Confidence 964 35677888876 55 444344
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=5.8e-09 Score=104.43 Aligned_cols=202 Identities=12% Similarity=0.051 Sum_probs=121.1
Q ss_pred CCcCCc-chHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc--------
Q 022578 1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------- 70 (295)
Q Consensus 1 tGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------- 70 (295)
|||+|. ||.++++.|++.|++|++++ |+.......... ....+.....++.++.+|++|.+++..+++.
T Consensus 681 TGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~e-L~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~ 759 (1887)
T 2uv8_A 681 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQS-IYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG 759 (1887)
T ss_dssp ESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-HHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTT
T ss_pred ECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHH-HHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhcccc
Confidence 799998 99999999999999999984 554432110000 0000001124688999999999998887753
Q ss_pred -C--CCcEEEEcccCChh-----------------------cHHHHHHhC---C-----CCCcEEEeeccccccCCCCCC
Q 022578 71 -K--GFDVVYDINGREAD-----------------------EVEPILDAL---P-----NLEQFIYCSSAGVYLKSDLLP 116 (295)
Q Consensus 71 -~--~~d~vi~~a~~~~~-----------------------~~~~ll~~~---~-----~~~~~i~~Ss~~v~~~~~~~~ 116 (295)
. .+|++||+||.... ++..+++++ . +..+||++||...+..
T Consensus 760 G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g----- 834 (1887)
T 2uv8_A 760 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG----- 834 (1887)
T ss_dssp SCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----
T ss_pred ccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----
Confidence 2 49999999986311 122333333 2 2358999999765321
Q ss_pred CCCCCCCCCCccchhhHHHHHH-hh----hc--CCcEEEeccCeeec-CCCC-CchHHHHHHHHHcCCCcccCCCCCcee
Q 022578 117 HCETDTVDPKSRHKGKLNTESV-LE----SK--GVNWTSLRPVYIYG-PLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVT 187 (295)
Q Consensus 117 ~~e~~~~~p~~~~~~k~~~E~~-~~----~~--~~~~~i~R~~~i~g-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (295)
....|..+|+..+.+ .+ +. .++++.+.||++.+ +-.. ...... .....+ .
T Consensus 835 -------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~----~~~~~p----------l 893 (1887)
T 2uv8_A 835 -------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE----GIEKMG----------V 893 (1887)
T ss_dssp -------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHH----HHHTTS----------C
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHH----HHHhcC----------C
Confidence 123456999998887 21 11 28899999999984 3111 011111 111111 1
Q ss_pred eeeeHHHHHHHHHHHhcCC---CCCCceEEec--CCcc--cCHHHHHHH
Q 022578 188 QLGHVKDLARAFVQVLGNE---KASRQVFNIS--GEKY--VTFDGLARA 229 (295)
Q Consensus 188 ~~i~~~D~a~~i~~~~~~~---~~~~~~~~i~--~~~~--~t~~e~~~~ 229 (295)
.+..++|+|++++.++... ...|..+.+. ++.. ..+.++...
T Consensus 894 r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~ 942 (1887)
T 2uv8_A 894 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAK 942 (1887)
T ss_dssp CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHH
Confidence 2357999999999988754 1246667663 5422 345555443
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=2.2e-08 Score=100.18 Aligned_cols=204 Identities=11% Similarity=0.048 Sum_probs=122.6
Q ss_pred CCcCCc-chHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-------C
Q 022578 1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K 71 (295)
Q Consensus 1 tGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~ 71 (295)
|||+|. ||.++++.|++.|++|++++ |+.......... ...++.....++.++.+|++|.+++..+++. +
T Consensus 658 TGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~e-L~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~ 736 (1878)
T 2uv9_A 658 TGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQG-IYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGL 736 (1878)
T ss_dssp ESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-HHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSC
T ss_pred ECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHH-HHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhccc
Confidence 799999 99999999999999999986 444331110000 0000011124688999999999999888763 2
Q ss_pred --CCcEEEEcccCChh-----------------------cHHHHHHh------CC--CCCcEEEeeccccccCCCCCCCC
Q 022578 72 --GFDVVYDINGREAD-----------------------EVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHC 118 (295)
Q Consensus 72 --~~d~vi~~a~~~~~-----------------------~~~~ll~~------~~--~~~~~i~~Ss~~v~~~~~~~~~~ 118 (295)
.+|++||+||.... ++.+++++ +. +..+||++||...+.+
T Consensus 737 G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g------- 809 (1878)
T 2uv9_A 737 GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG------- 809 (1878)
T ss_dssp CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS-------
T ss_pred CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC-------
Confidence 48999999986311 11122222 22 2368999999764321
Q ss_pred CCCCCCCCccchhhHHHHHHhh----h---cCCcEEEeccCeee-cCCCCCchHHHHHHHHHcCCCcccCCCCCceeeee
Q 022578 119 ETDTVDPKSRHKGKLNTESVLE----S---KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 119 e~~~~~p~~~~~~k~~~E~~~~----~---~~~~~~i~R~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
....|..+|+..+.+.+ . .+++++.+.||++- .+.... ...........++ .+.
T Consensus 810 -----g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~---~~~~~~~~~~~pl----------r~~ 871 (1878)
T 2uv9_A 810 -----NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA---NNLVAEGVEKLGV----------RTF 871 (1878)
T ss_dssp -----CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH---HHHTHHHHHTTTC----------CCB
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc---chhhHHHHHhcCC----------CCC
Confidence 12346699998887642 1 13889999999987 442211 0111111111111 224
Q ss_pred eHHHHHHHHHHHhcCCC---CCCceEEec--CCcc--cCHHHHHHHH
Q 022578 191 HVKDLARAFVQVLGNEK---ASRQVFNIS--GEKY--VTFDGLARAC 230 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~~---~~~~~~~i~--~~~~--~t~~e~~~~i 230 (295)
.++|+|++++.++.... ..|..+.+. ++.. ..+.++...+
T Consensus 872 sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l 918 (1878)
T 2uv9_A 872 SQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL 918 (1878)
T ss_dssp CHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence 79999999999886532 246677663 5432 3455555443
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=1.3e-08 Score=88.78 Aligned_cols=147 Identities=9% Similarity=-0.085 Sum_probs=97.5
Q ss_pred CCcCCcchHH--HHHHHHHCCCeEEEEecCCCccccCCC-------CCCchhhhhccCCeEEEEecCCChHHHHHhhhc-
Q 022578 1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA- 70 (295)
Q Consensus 1 tGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~- 70 (295)
|||++-||.+ +++.|.++|++|++++|+......... ........+....+..+.+|+++.++++++++.
T Consensus 66 TGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i 145 (418)
T 4eue_A 66 VGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYI 145 (418)
T ss_dssp ESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence 7999999999 999999999999999998665322110 000111122335688999999999888877754
Q ss_pred ----CCCcEEEEcccCCh-------------------------------------------hc---H---------HHHH
Q 022578 71 ----KGFDVVYDINGREA-------------------------------------------DE---V---------EPIL 91 (295)
Q Consensus 71 ----~~~d~vi~~a~~~~-------------------------------------------~~---~---------~~ll 91 (295)
..+|++||+||... +. + ..++
T Consensus 146 ~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~ 225 (418)
T 4eue_A 146 KDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWC 225 (418)
T ss_dssp HHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHH
T ss_pred HHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHHHHHH
Confidence 27899999987630 00 0 0222
Q ss_pred HhCC------CCCcEEEeeccccccCCCCCCCCCCCCCCC--CccchhhHHHHHHh-------hh-cCCcEEEeccCeee
Q 022578 92 DALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDP--KSRHKGKLNTESVL-------ES-KGVNWTSLRPVYIY 155 (295)
Q Consensus 92 ~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p--~~~~~~k~~~E~~~-------~~-~~~~~~i~R~~~i~ 155 (295)
.++. +..++|.+||.+.... .+.. ..|..+|+..+.+. .. .|+++..+.||.+-
T Consensus 226 ~~l~~~~~~~~gg~IV~iSSi~~~~~----------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~ 295 (418)
T 4eue_A 226 EELLYEDCFSDKATTIAYSYIGSPRT----------YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALV 295 (418)
T ss_dssp HHHHHTTCEEEEEEEEEEECCCCGGG----------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred HHHHHHhhhcCCcEEEEEeCchhcCC----------CCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCc
Confidence 2211 3358999998764211 0111 33558999887764 35 78999999999887
Q ss_pred cC
Q 022578 156 GP 157 (295)
Q Consensus 156 g~ 157 (295)
.+
T Consensus 296 T~ 297 (418)
T 4eue_A 296 TK 297 (418)
T ss_dssp CH
T ss_pred Ch
Confidence 75
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.1e-08 Score=88.67 Aligned_cols=187 Identities=12% Similarity=0.007 Sum_probs=114.1
Q ss_pred CCcCCcchHHHHHHHHH-CCCeEEEEecCCCccccCCCC-------CCchhhhhccCCeEEEEecCCChHHHHHhhhc--
Q 022578 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-- 70 (295)
|||++-||.++++.|++ .|++|.+++|+.......... .....+.+....+..+.+|++|++++.++++.
T Consensus 67 TGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~ 146 (422)
T 3s8m_A 67 IGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIK 146 (422)
T ss_dssp ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred ECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 79999999999999999 999999999987653221100 00012233345688899999999887776643
Q ss_pred --C--CCcEEEEcccCC-----------------h----------------------h-------------cH---HHHH
Q 022578 71 --K--GFDVVYDINGRE-----------------A----------------------D-------------EV---EPIL 91 (295)
Q Consensus 71 --~--~~d~vi~~a~~~-----------------~----------------------~-------------~~---~~ll 91 (295)
. .+|++||+||.. . + .. ..++
T Consensus 147 ~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~ 226 (422)
T 3s8m_A 147 TEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWI 226 (422)
T ss_dssp HHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHH
T ss_pred HHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHH
Confidence 2 689999998751 0 0 01 1223
Q ss_pred HhC-----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCC
Q 022578 92 DAL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPL 158 (295)
Q Consensus 92 ~~~-----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~ 158 (295)
.++ . +..++|++||.+..-..+. .....|..+|+..+.+.+ ..|+++..+.||.+-.+.
T Consensus 227 ~a~~~~~m~~~gG~IVniSSi~g~~~~p~--------~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~ 298 (422)
T 3s8m_A 227 DALEGAGVLADGARSVAFSYIGTEITWPI--------YWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA 298 (422)
T ss_dssp HHHHHTTCEEEEEEEEEEEECCCGGGHHH--------HTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred HHHHHHHHhhCCCEEEEEeCchhhccCCC--------ccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence 332 1 2358999999764311000 001234589998887653 468999999999998874
Q ss_pred CCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 159 NYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 159 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
... +..+....... +++.-.|. .+|+++++.+++.+.
T Consensus 299 ~~~ip~~~~~~~~~~--~~m~r~G~---------pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 299 SAAIPVMPLYISMVY--KIMKEKGL---------HEGTIEQLDRLFRER 336 (422)
T ss_dssp GGGSTHHHHHHHHHH--HHHHHTTC---------CCCHHHHHHHHHHHT
T ss_pred hhcCCCChHHHHHHH--hhhcCCcC---------hHHHHHHHHHHhcch
Confidence 321 11111111111 12221232 568888888887653
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.70 E-value=5.2e-08 Score=89.47 Aligned_cols=204 Identities=12% Similarity=0.050 Sum_probs=119.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCC--C--CCCchhhhhccCCeEEEEecCCChHHHHHhh----hc-C
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--P--GESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SA-K 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~--~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~----~~-~ 71 (295)
|||++.||+.+++.|+++|++|++.+|+........ . .....++.+. +.+ ..+|+.|.+++++++ +. -
T Consensus 14 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~-~~~d~~d~~~~~~~v~~~~~~~G 90 (604)
T 2et6_A 14 TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGV-AVADYNNVLDGDKIVETAVKNFG 90 (604)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCE-EEEECCCTTCHHHHHHHHHHHHS
T ss_pred eCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCe-EEEEcCCHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999887652100000 0 0000111111 112 235666654333332 22 2
Q ss_pred CCcEEEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 72 GFDVVYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 72 ~~d~vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
.+|++||+||.. ..+ ++.++..++ +..++|++||...+-... ..
T Consensus 91 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~----------~~ 160 (604)
T 2et6_A 91 TVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF----------GQ 160 (604)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TB
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC----------Cc
Confidence 799999999962 122 333344443 557999999976532211 11
Q ss_pred CccchhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 126 KSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 126 ~~~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..|..+|+....+. ..+|+++..+.|+. .. .. .. ...+ ........++|+|.+
T Consensus 161 ~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~T-----~m----~~---~~~~-------~~~~~~~~pe~vA~~ 220 (604)
T 2et6_A 161 ANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-RS-----RM----TE---SIMP-------PPMLEKLGPEKVAPL 220 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CC-----HH----HH---TTSC-------HHHHTTCSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-cC-----cc----cc---ccCC-------hhhhccCCHHHHHHH
Confidence 23558999887665 35689999999962 11 11 11 0000 001122478999999
Q ss_pred HHHHhcCCC-CCCceEEecCC------------------cccCHHHHHHHHHHHhCCC
Q 022578 199 FVQVLGNEK-ASRQVFNISGE------------------KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 199 i~~~~~~~~-~~~~~~~i~~~------------------~~~t~~e~~~~i~~~~g~~ 237 (295)
++.++.... ..|+.+.+.++ ..++..++.+.+.+.....
T Consensus 221 v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 278 (604)
T 2et6_A 221 VLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYD 278 (604)
T ss_dssp HHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCCC
T ss_pred HHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhchh
Confidence 999987642 35677777654 3367889998888876543
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.2e-07 Score=79.92 Aligned_cols=149 Identities=13% Similarity=-0.035 Sum_probs=98.2
Q ss_pred CCcCCcchHHHHHHHHH-CCCeEEEEecCCCccccCCCC-------CCchhhhhccCCeEEEEecCCChHHHHHhhhc--
Q 022578 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-- 70 (295)
|||++-||.++++.|++ .|++|.+++|+.......... .....+.+....+..+.+|++|++++.++++.
T Consensus 53 TGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~ 132 (405)
T 3zu3_A 53 IGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIK 132 (405)
T ss_dssp ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred eCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 79999999999999999 999999999876553211100 00111222335678899999999888877754
Q ss_pred ---CCCcEEEEcccCCh--------------------------------------h----------------cHH-HHHH
Q 022578 71 ---KGFDVVYDINGREA--------------------------------------D----------------EVE-PILD 92 (295)
Q Consensus 71 ---~~~d~vi~~a~~~~--------------------------------------~----------------~~~-~ll~ 92 (295)
-.+|++||+||... . +.- .++.
T Consensus 133 ~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~ 212 (405)
T 3zu3_A 133 QDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWID 212 (405)
T ss_dssp HHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHH
T ss_pred HHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHHHHHH
Confidence 27899999987520 0 011 2222
Q ss_pred hC-----C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------hc-CCcEEEeccCeeecC
Q 022578 93 AL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SK-GVNWTSLRPVYIYGP 157 (295)
Q Consensus 93 ~~-----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~-~~~~~i~R~~~i~g~ 157 (295)
++ . +..++|++||.+....... .....|..+|...+.+.+ .. |+++..+.||.+-.+
T Consensus 213 ~~~~~~m~~~gG~IVniSSi~~~~~~p~--------~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 213 ALLDAGVLAEGAQTTAFTYLGEKITHDI--------YWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp HHHHHTCEEEEEEEEEEECCCCGGGTTT--------TTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred HHHHHhhhhCCcEEEEEeCchhhCcCCC--------ccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 21 1 2358999999764311100 001335599999887653 46 899999999988775
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.6e-07 Score=69.49 Aligned_cols=92 Identities=12% Similarity=0.089 Sum_probs=66.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~ 79 (295)
+|+ |.+|..+++.|.+.|++|++++|++........ .+..++.+|.++.+.+.++ +. ++|+||++
T Consensus 12 ~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-----------~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~ 77 (144)
T 2hmt_A 12 IGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----------YATHAVIANATEENELLSLGIR--NFEYVIVA 77 (144)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-----------TCSEEEECCTTCHHHHHTTTGG--GCSEEEEC
T ss_pred ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------hCCEEEEeCCCCHHHHHhcCCC--CCCEEEEC
Confidence 476 999999999999999999999998765322111 2456788999998888776 66 89999999
Q ss_pred ccCChhcHHHHHHhCC--CCCcEEEeecc
Q 022578 80 NGREADEVEPILDALP--NLEQFIYCSSA 106 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~--~~~~~i~~Ss~ 106 (295)
++........++..++ +..++|..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 78 IGANIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 8865344444555555 55566655543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=5.3e-07 Score=94.60 Aligned_cols=144 Identities=17% Similarity=0.149 Sum_probs=98.4
Q ss_pred CCcCCcchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~ 75 (295)
|||+|.||..+++.|+++|++ |++++|+..+...... ...++.....++.++.+|++|.+++.++++. ..+|+
T Consensus 1890 TGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~--~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~ 1967 (2512)
T 2vz8_A 1890 TGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQAR--QVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGG 1967 (2512)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHH--HHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEE
T ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHH--HHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcE
Confidence 799999999999999999997 7778887654210000 0011122234688899999999988887754 26899
Q ss_pred EEEcccC--------------------ChhcHHHHHHh----CCCCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGR--------------------EADEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
|||+||. |..++.++.++ +....+||++||....-+.. ....|..+
T Consensus 1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~----------g~~~Y~aa 2037 (2512)
T 2vz8_A 1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA----------GQANYGFA 2037 (2512)
T ss_dssp EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT----------TCHHHHHH
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC----------CcHHHHHH
Confidence 9999986 34456665444 33457999999976542211 12335599
Q ss_pred hHHHHHHhh---hcCCcEEEeccCeeec
Q 022578 132 KLNTESVLE---SKGVNWTSLRPVYIYG 156 (295)
Q Consensus 132 k~~~E~~~~---~~~~~~~i~R~~~i~g 156 (295)
|...+.+.+ ..|++...+-.+.+-+
T Consensus 2038 Kaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2038 NSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp HHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred HHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence 999888764 5788877777765543
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.28 E-value=9.8e-07 Score=65.20 Aligned_cols=86 Identities=26% Similarity=0.237 Sum_probs=63.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~ 81 (295)
|.|.+|+.+++.|.+.|++|++++++++..... . ..++.++.+|.++++.+.++ +. ++|+||.+.+
T Consensus 13 G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~---------~--~~~~~~~~gd~~~~~~l~~~~~~--~~d~vi~~~~ 79 (141)
T 3llv_A 13 GSEAAGVGLVRELTAAGKKVLAVDKSKEKIELL---------E--DEGFDAVIADPTDESFYRSLDLE--GVSAVLITGS 79 (141)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH---------H--HTTCEEEECCTTCHHHHHHSCCT--TCSEEEECCS
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH---------H--HCCCcEEECCCCCHHHHHhCCcc--cCCEEEEecC
Confidence 349999999999999999999999987663211 1 14688999999999988876 34 8999999887
Q ss_pred CChhcHHHHHHhCC--CCCcEEE
Q 022578 82 READEVEPILDALP--NLEQFIY 102 (295)
Q Consensus 82 ~~~~~~~~ll~~~~--~~~~~i~ 102 (295)
+......++..++ +..++|-
T Consensus 80 -~~~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 80 -DDEFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp -CHHHHHHHHHHHHHHCCCCEEE
T ss_pred -CHHHHHHHHHHHHHhCCceEEE
Confidence 4444444455554 5445554
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.2e-06 Score=73.01 Aligned_cols=74 Identities=19% Similarity=0.203 Sum_probs=58.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|.+|++++..|++.|++|++++|+.++..+.. ..+... .++.++.+|+++.+++.++++ ++|+|||++
T Consensus 125 tGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~-----~~~~~~-~~~~~~~~D~~~~~~~~~~~~--~~DvlVn~a 196 (287)
T 1lu9_A 125 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA-----DSVNKR-FKVNVTAAETADDASRAEAVK--GAHFVFTAG 196 (287)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHH-HTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH-----HHHHhc-CCcEEEEecCCCHHHHHHHHH--hCCEEEECC
Confidence 699999999999999999999999999865522111 011111 246788899999999999998 899999999
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
+.
T Consensus 197 g~ 198 (287)
T 1lu9_A 197 AI 198 (287)
T ss_dssp CT
T ss_pred Cc
Confidence 75
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.15 E-value=3.9e-06 Score=61.62 Aligned_cols=90 Identities=17% Similarity=0.216 Sum_probs=62.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~ 79 (295)
+| .|++|..+++.|.+.|++|++++|+++.... +.. ..++.++.+|..+++.+.+. ++ ++|+||++
T Consensus 10 iG-~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~---------~~~-~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~ 76 (140)
T 1lss_A 10 AG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKK---------ASA-EIDALVINGDCTKIKTLEDAGIE--DADMYIAV 76 (140)
T ss_dssp EC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHH-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEEC
T ss_pred EC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHH---------HHH-hcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEe
Confidence 35 4999999999999999999999997655211 111 12567888999988877655 55 89999999
Q ss_pred ccCChhcHHHHHHhCC--CCCcEEEee
Q 022578 80 NGREADEVEPILDALP--NLEQFIYCS 104 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~--~~~~~i~~S 104 (295)
.+.. .....+++.++ +..++|..+
T Consensus 77 ~~~~-~~~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 77 TGKE-EVNLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp CSCH-HHHHHHHHHHHHTTCCCEEEEC
T ss_pred eCCc-hHHHHHHHHHHHcCCCEEEEEe
Confidence 7643 22233444444 555776533
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.09 E-value=4.3e-06 Score=70.78 Aligned_cols=95 Identities=17% Similarity=0.248 Sum_probs=64.5
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+|++|..++..|+++| ++|+++++++.... ...+........+ .+ +.+.+++.++++ ++|+|||
T Consensus 14 iGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~-------~~dL~~~~~~~~v-~~-~~~t~d~~~al~--gaDvVi~ 82 (326)
T 1smk_A 14 LGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV-------TADISHMDTGAVV-RG-FLGQQQLEAALT--GMDLIIV 82 (326)
T ss_dssp ETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHH-------HHHHHTSCSSCEE-EE-EESHHHHHHHHT--TCSEEEE
T ss_pred ECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhH-------HHHhhcccccceE-EE-EeCCCCHHHHcC--CCCEEEE
Confidence 5899999999999999998 89999987765210 0001111111122 22 234567778898 9999999
Q ss_pred cccC--------------ChhcHHHHHHhCC--CCCcEEEeecc
Q 022578 79 INGR--------------EADEVEPILDALP--NLEQFIYCSSA 106 (295)
Q Consensus 79 ~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~ 106 (295)
+++. |...++++++++. +...+|+++|-
T Consensus 83 ~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 83 PAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred cCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 9986 2356788888876 66778887763
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.03 E-value=8.4e-06 Score=72.10 Aligned_cols=70 Identities=16% Similarity=0.139 Sum_probs=56.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+| +|++|+.+++.|++.|++|++.+|++++..+... ...++..+.+|+.|.+++.++++ ++|+|||++
T Consensus 9 iG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~---------~~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a 76 (450)
T 1ff9_A 9 LG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA---------GVQHSTPISLDVNDDAALDAEVA--KHDLVISLI 76 (450)
T ss_dssp EC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT---------TCTTEEEEECCTTCHHHHHHHHT--TSSEEEECC
T ss_pred EC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH---------hcCCceEEEeecCCHHHHHHHHc--CCcEEEECC
Confidence 46 8999999999999999999999998766322211 12357788999999999999998 999999999
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
+.
T Consensus 77 ~~ 78 (450)
T 1ff9_A 77 PY 78 (450)
T ss_dssp C-
T ss_pred cc
Confidence 86
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=4.4e-05 Score=57.19 Aligned_cols=89 Identities=17% Similarity=0.250 Sum_probs=62.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~ 81 (295)
|.|.+|..+++.|.+.|++|++++|++........ ..++.++.+|..+++.+.++ +. ++|+||.+.+
T Consensus 26 G~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~~ 93 (155)
T 2g1u_A 26 GCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGME--KADMVFAFTN 93 (155)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGG--GCSEEEECSS
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCcc--cCCEEEEEeC
Confidence 35999999999999999999999998877432210 13567888999888877765 66 8999999987
Q ss_pred CChhcHHHHHHhCC---CCCcEEEee
Q 022578 82 READEVEPILDALP---NLEQFIYCS 104 (295)
Q Consensus 82 ~~~~~~~~ll~~~~---~~~~~i~~S 104 (295)
. ......+++.++ +..++|...
T Consensus 94 ~-~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 94 D-DSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp C-HHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred C-cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 5 233333334433 444555444
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.96 E-value=6.1e-06 Score=72.06 Aligned_cols=96 Identities=13% Similarity=0.084 Sum_probs=68.6
Q ss_pred CCcCCcchHHHHHHHHHCC---CeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
+|| |++|+.+++.|++.| .+|++.+|+.++..+.. ..+... ..++..+.+|++|.+++.+++++.++|+|
T Consensus 7 iGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la-----~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 7 IGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIA-----QSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp ECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHH-----HHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred ECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHH-----HHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 477 999999999999998 39999999877632111 001100 12588999999999999999994459999
Q ss_pred EEcccCChhcHHHHHHhCC-CCCcEEEee
Q 022578 77 YDINGREADEVEPILDALP-NLEQFIYCS 104 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~-~~~~~i~~S 104 (295)
||+++.. ....++++|. ...+++-++
T Consensus 81 in~ag~~--~~~~v~~a~l~~g~~vvD~a 107 (405)
T 4ina_A 81 LNIALPY--QDLTIMEACLRTGVPYLDTA 107 (405)
T ss_dssp EECSCGG--GHHHHHHHHHHHTCCEEESS
T ss_pred EECCCcc--cChHHHHHHHHhCCCEEEec
Confidence 9999864 3456677765 334555443
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.87 E-value=9.9e-06 Score=69.81 Aligned_cols=86 Identities=15% Similarity=0.083 Sum_probs=67.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|| |++|+.+++.|.+ .++|++.+|+....... ...+..+..|..|.+++.++++ ++|+||+++
T Consensus 22 lGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~------------~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~ 85 (365)
T 3abi_A 22 LGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV------------KEFATPLKVDASNFDKLVEVMK--EFELVIGAL 85 (365)
T ss_dssp ECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH------------TTTSEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred ECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH------------hccCCcEEEecCCHHHHHHHHh--CCCEEEEec
Confidence 476 9999999988865 58999999887663221 2457788999999999999999 999999998
Q ss_pred cCChhcHHHHHHhCC-CCCcEEEee
Q 022578 81 GREADEVEPILDALP-NLEQFIYCS 104 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~-~~~~~i~~S 104 (295)
+.. ....++++|. ..+++|=+|
T Consensus 86 p~~--~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 86 PGF--LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CGG--GHHHHHHHHHHHTCEEEECC
T ss_pred CCc--ccchHHHHHHhcCcceEeee
Confidence 764 4457777776 555887665
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=97.80 E-value=2.7e-06 Score=72.16 Aligned_cols=95 Identities=11% Similarity=0.015 Sum_probs=61.6
Q ss_pred CCcCCcchHHHHHHHHHCCC-------eEEEEecC----CCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhh
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRG----KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS 69 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 69 (295)
|||+|++|++++..|+..|+ +|.++++. .++.... ...+... ...+ ..|+...+++.++++
T Consensus 11 iGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~-----~~dl~~~--~~~~-~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 11 TGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGV-----MMEIDDC--AFPL-LAGMTAHADPMTAFK 82 (329)
T ss_dssp SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHH-----HHHHHTT--TCTT-EEEEEEESSHHHHTT
T ss_pred ECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhh-----HHHHhhh--cccc-cCcEEEecCcHHHhC
Confidence 79999999999999999885 79988877 3211100 0001110 0111 135544455678888
Q ss_pred cCCCcEEEEcccCC--------------hhcHHHHHHhCC--C-CC-cEEEeec
Q 022578 70 AKGFDVVYDINGRE--------------ADEVEPILDALP--N-LE-QFIYCSS 105 (295)
Q Consensus 70 ~~~~d~vi~~a~~~--------------~~~~~~ll~~~~--~-~~-~~i~~Ss 105 (295)
++|+|||++|.+ ...++++++++. . .. +||++|.
T Consensus 83 --~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 83 --DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp --TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred --CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 999999999863 334677777765 3 33 8888886
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.75 E-value=3.9e-05 Score=57.31 Aligned_cols=89 Identities=11% Similarity=0.162 Sum_probs=61.5
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEcccC
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR 82 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~~ 82 (295)
.|.+|+.+++.|.+.|++|+++++++......+. .....++.++.+|.++++.+.++ ++ ++|.||.+.+.
T Consensus 11 ~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~~ 81 (153)
T 1id1_A 11 HSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGID--RCRAILALSDN 81 (153)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEECSSC
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHH-------HhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEecCC
Confidence 5999999999999999999999997532000000 01124689999999999999887 77 99999998764
Q ss_pred ChhcHHHHHHhCC---CCCcEEE
Q 022578 83 EADEVEPILDALP---NLEQFIY 102 (295)
Q Consensus 83 ~~~~~~~ll~~~~---~~~~~i~ 102 (295)
. .....+...++ +..++|-
T Consensus 82 d-~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 82 D-ADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp H-HHHHHHHHHHHHHTSSSCEEE
T ss_pred h-HHHHHHHHHHHHHCCCCEEEE
Confidence 2 22333333343 4445553
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.73 E-value=4.3e-05 Score=67.75 Aligned_cols=70 Identities=21% Similarity=0.161 Sum_probs=56.5
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+|+ |++|+.+++.|++. |++|++++|++++..+ +.+. .++..+.+|+.+.+++.++++ ++|+|||+
T Consensus 29 iGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~---------la~~-~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~ 95 (467)
T 2axq_A 29 LGS-GFVAQPVIDTLAANDDINVTVACRTLANAQA---------LAKP-SGSKAISLDVTDDSALDKVLA--DNDVVISL 95 (467)
T ss_dssp ECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHH---------HHGG-GTCEEEECCTTCHHHHHHHHH--TSSEEEEC
T ss_pred ECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHH---------HHHh-cCCcEEEEecCCHHHHHHHHc--CCCEEEEC
Confidence 476 99999999999998 7899999998766321 1111 356778899999999999998 99999999
Q ss_pred ccCC
Q 022578 80 NGRE 83 (295)
Q Consensus 80 a~~~ 83 (295)
++..
T Consensus 96 tp~~ 99 (467)
T 2axq_A 96 IPYT 99 (467)
T ss_dssp SCGG
T ss_pred Cchh
Confidence 8763
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00011 Score=58.47 Aligned_cols=64 Identities=14% Similarity=0.189 Sum_probs=46.1
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH----HHHHhhhcCCCcEEEEc
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~----~~~~~~~~~~~d~vi~~ 79 (295)
||.+|.+++++|+++|++|++++|...... ..+ .+++.+.. ...+ .+.+.+. ++|++||+
T Consensus 28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~~-----------~~~~~~~v--~s~~em~~~v~~~~~--~~Dili~a 91 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYEVCLITTKRALKP-EPH-----------PNLSIREI--TNTKDLLIEMQERVQ--DYQVLIHS 91 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CCC-----------TTEEEEEC--CSHHHHHHHHHHHGG--GCSEEEEC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCccccc-cCC-----------CCeEEEEH--hHHHHHHHHHHHhcC--CCCEEEEc
Confidence 899999999999999999999999864311 111 35665544 4443 3344445 79999999
Q ss_pred ccCC
Q 022578 80 NGRE 83 (295)
Q Consensus 80 a~~~ 83 (295)
|+..
T Consensus 92 AAvs 95 (232)
T 2gk4_A 92 MAVS 95 (232)
T ss_dssp SBCC
T ss_pred Cccc
Confidence 9973
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=3.7e-05 Score=64.68 Aligned_cols=96 Identities=19% Similarity=0.159 Sum_probs=61.5
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEec--CCCccccCCCCCCchhhh---hcc-CCeEEEEecCCChHHHHHhhhcCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFA---EFS-SKILHLKGDRKDYDFVKSSLSAKG 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~---~~~-~~v~~~~~D~~~~~~~~~~~~~~~ 72 (295)
|||+|++|++++..|+..|. ++.++++ ........ ...+. ... ..+++...+ +++.++++ +
T Consensus 6 ~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~-----~~dl~~~~~~~~~~~~i~~~~----d~l~~al~--g 74 (313)
T 1hye_A 6 IGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGL-----REDIYDALAGTRSDANIYVES----DENLRIID--E 74 (313)
T ss_dssp ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHH-----HHHHHHHHTTSCCCCEEEEEE----TTCGGGGT--T
T ss_pred ECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHH-----HHHHHHhHHhcCCCeEEEeCC----cchHHHhC--C
Confidence 69999999999999998874 5777776 33211000 00001 011 233333322 23456788 9
Q ss_pred CcEEEEcccC--------------ChhcHHHHHHhCC--CCCcEEEeecccc
Q 022578 73 FDVVYDINGR--------------EADEVEPILDALP--NLEQFIYCSSAGV 108 (295)
Q Consensus 73 ~d~vi~~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v 108 (295)
+|+|||+||. |...+++++++++ + ..+|+++|--+
T Consensus 75 aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 9999999986 4456888888887 7 88888887433
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.63 E-value=4e-05 Score=56.36 Aligned_cols=68 Identities=9% Similarity=0.138 Sum_probs=55.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~ 81 (295)
|.|.+|..+++.|.+.|++|++++++++..... . ..++.++.+|.++++.+.++ ++ +.|.||-+.+
T Consensus 14 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~---------~--~~g~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~ 80 (140)
T 3fwz_A 14 GYGRVGSLLGEKLLASDIPLVVIETSRTRVDEL---------R--ERGVRAVLGNAANEEIMQLAHLE--CAKWLILTIP 80 (140)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH---------H--HTTCEEEESCTTSHHHHHHTTGG--GCSEEEECCS
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH---------H--HcCCCEEECCCCCHHHHHhcCcc--cCCEEEEECC
Confidence 469999999999999999999999998763211 1 15788999999999988765 45 8999998876
Q ss_pred CC
Q 022578 82 RE 83 (295)
Q Consensus 82 ~~ 83 (295)
..
T Consensus 81 ~~ 82 (140)
T 3fwz_A 81 NG 82 (140)
T ss_dssp CH
T ss_pred Ch
Confidence 53
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.58 E-value=5.6e-06 Score=69.35 Aligned_cols=93 Identities=18% Similarity=0.171 Sum_probs=59.5
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEec--CCCccccCCCCCCchhhhh---ccCCeEEEEecCCChHHHHHhhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~ 73 (295)
|||+|++|+.++..|+..++ ++.++++ ...+.... ...+.. ...++++... + .++++ ++
T Consensus 6 iGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~-----~~dl~~~~~~~~~~~v~~~---~----~~a~~--~a 71 (303)
T 1o6z_A 6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQ-----AADTNHGIAYDSNTRVRQG---G----YEDTA--GS 71 (303)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHH-----HHHHHHHHTTTCCCEEEEC---C----GGGGT--TC
T ss_pred ECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHH-----HHHHHHHHhhCCCcEEEeC---C----HHHhC--CC
Confidence 68999999999999998875 6777777 43221100 011111 1234444432 2 34577 99
Q ss_pred cEEEEcccC--------------ChhcHHHHHHhCC--CCCcEEEeeccc
Q 022578 74 DVVYDINGR--------------EADEVEPILDALP--NLEQFIYCSSAG 107 (295)
Q Consensus 74 d~vi~~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~ 107 (295)
|+|||+++. |...++++++++. +...+|+++|--
T Consensus 72 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNP 121 (303)
T 1o6z_A 72 DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP 121 (303)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 999999986 2346788888876 566777777643
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.58 E-value=5.2e-05 Score=58.45 Aligned_cols=79 Identities=19% Similarity=0.105 Sum_probs=59.8
Q ss_pred cCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh--hhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~--~~~~~~d~vi~~ 79 (295)
|.|.+|..+++.|.+. |++|++++++++..... . ..++.++.+|.++++.+.++ ++ ++|+||.+
T Consensus 46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~---------~--~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~ 112 (183)
T 3c85_A 46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQH---------R--SEGRNVISGDATDPDFWERILDTG--HVKLVLLA 112 (183)
T ss_dssp CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH---------H--HTTCCEEECCTTCHHHHHTBCSCC--CCCEEEEC
T ss_pred CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH---------H--HCCCCEEEcCCCCHHHHHhccCCC--CCCEEEEe
Confidence 4699999999999999 99999999987663211 1 14678889999999888776 66 89999998
Q ss_pred ccCChhcHHHHHHhCC
Q 022578 80 NGREADEVEPILDALP 95 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~ 95 (295)
.+. ......++..++
T Consensus 113 ~~~-~~~~~~~~~~~~ 127 (183)
T 3c85_A 113 MPH-HQGNQTALEQLQ 127 (183)
T ss_dssp CSS-HHHHHHHHHHHH
T ss_pred CCC-hHHHHHHHHHHH
Confidence 764 344444555554
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0001 Score=57.45 Aligned_cols=93 Identities=16% Similarity=0.154 Sum_probs=62.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHH---HhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK---SSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~---~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|.+|++++|+++..... .+ .+.+. ..|..+.+..+ +.....++|+||
T Consensus 45 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~---------~~--~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 45 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML---------SR--LGVEY-VGDSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH---------HT--TCCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred eeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--cCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence 68999999999999999999999999876552111 11 12222 24666544333 333323699999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
+++|. ......++.++...++|.+++..
T Consensus 113 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 113 NSLAG--EAIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp ECCCT--HHHHHHHHTEEEEEEEEECSCGG
T ss_pred ECCch--HHHHHHHHHhccCCEEEEEcCCC
Confidence 99873 45666777777445899887654
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.37 E-value=8.4e-05 Score=59.02 Aligned_cols=68 Identities=19% Similarity=0.297 Sum_probs=54.9
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEcc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN 80 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a 80 (295)
| .|.+|+.+++.|.+.|++|++++++++..... .. ..++.++.+|.++++.+.++ ++ ++|+||-+.
T Consensus 7 G-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l---------~~-~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~ 73 (218)
T 3l4b_C 7 G-GETTAYYLARSMLSRKYGVVIINKDRELCEEF---------AK-KLKATIIHGDGSHKEILRDAEVS--KNDVVVILT 73 (218)
T ss_dssp C-CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHH---------HH-HSSSEEEESCTTSHHHHHHHTCC--TTCEEEECC
T ss_pred C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH---------HH-HcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEec
Confidence 5 59999999999999999999999988763211 11 13688999999999998876 56 899999887
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
+.
T Consensus 74 ~~ 75 (218)
T 3l4b_C 74 PR 75 (218)
T ss_dssp SC
T ss_pred CC
Confidence 65
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00041 Score=59.73 Aligned_cols=92 Identities=12% Similarity=0.106 Sum_probs=64.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|+ |.+|..+++.|...|++|++++|++.+... ..+. .+.. +.+|..+.+.+.+.+. ++|+||+++
T Consensus 172 iGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~---------~~~~-~g~~-~~~~~~~~~~l~~~~~--~~DvVi~~~ 237 (369)
T 2eez_A 172 LGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQY---------LDDV-FGGR-VITLTATEANIKKSVQ--HADLLIGAV 237 (369)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHH-TTTS-EEEEECCHHHHHHHHH--HCSEEEECC
T ss_pred ECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHHh-cCce-EEEecCCHHHHHHHHh--CCCEEEECC
Confidence 476 999999999999999999999998765211 0110 1122 4567778888999998 899999998
Q ss_pred cCChh-----cHHHHHHhCCCCCcEEEeecc
Q 022578 81 GREAD-----EVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 81 ~~~~~-----~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+.... -.+..++.++....+|.+|+.
T Consensus 238 g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 238 LVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp C-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred CCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence 86431 156677777755689988864
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00076 Score=53.45 Aligned_cols=64 Identities=13% Similarity=0.137 Sum_probs=45.6
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc--CCCcEEEEccc
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING 81 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--~~~d~vi~~a~ 81 (295)
||.+|.+++++|.++|++|+++++.... . .+ .+++ .+|+++.+++.+.+.+ .++|++||+||
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~--~~-----------~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aa 96 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVSGPVSL-P--TP-----------PFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAA 96 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECSCCC-C--CC-----------TTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCB
T ss_pred ccHHHHHHHHHHHHCCCEEEEEECCccc-c--cC-----------CCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCc
Confidence 7999999999999999999998876521 1 11 2344 4577776555443321 17999999999
Q ss_pred CC
Q 022578 82 RE 83 (295)
Q Consensus 82 ~~ 83 (295)
..
T Consensus 97 v~ 98 (226)
T 1u7z_A 97 VA 98 (226)
T ss_dssp CC
T ss_pred cc
Confidence 74
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00033 Score=59.19 Aligned_cols=92 Identities=16% Similarity=0.139 Sum_probs=62.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHH---HHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---~~~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|++|++++|++++... ..+. +.+. ..|..+.+. +.+.....++|+||
T Consensus 147 ~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~---------~~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi 214 (327)
T 1qor_A 147 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS---------ALKA--GAWQ-VINYREEDLVERLKEITGGKKVRVVY 214 (327)
T ss_dssp SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH---------HHHH--TCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHHc--CCCE-EEECCCccHHHHHHHHhCCCCceEEE
Confidence 6899999999999999999999999988655211 1111 2222 235555433 33333334799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+++| .......++.++...+++.+++.
T Consensus 215 ~~~g--~~~~~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 215 DSVG--RDTWERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp ECSC--GGGHHHHHHTEEEEEEEEECCCT
T ss_pred ECCc--hHHHHHHHHHhcCCCEEEEEecC
Confidence 9998 45667777877744588887753
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00054 Score=58.04 Aligned_cols=92 Identities=21% Similarity=0.194 Sum_probs=62.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH---HHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|++|++++|++++... ..+. +.+. ..|..+.+ .+.+.....++|+||
T Consensus 152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~---------~~~~--g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi 219 (333)
T 1wly_A 152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET---------ARKL--GCHH-TINYSTQDFAEVVREITGGKGVDVVY 219 (333)
T ss_dssp TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHH--TCSE-EEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCCE-EEECCCHHHHHHHHHHhCCCCCeEEE
Confidence 6899999999999999999999999998655211 1111 2222 23555443 333333334799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+++|. ......++.++...++|.++..
T Consensus 220 ~~~g~--~~~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 220 DSIGK--DTLQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp ECSCT--TTHHHHHHTEEEEEEEEECCCT
T ss_pred ECCcH--HHHHHHHHhhccCCEEEEEecC
Confidence 99986 5667777777744488877643
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0016 Score=55.68 Aligned_cols=82 Identities=12% Similarity=0.036 Sum_probs=61.6
Q ss_pred CCcCCcchHHHHHHHH-HCCCeEEEEecCCCccccCCCC-------CCchhhhhccCCeEEEEecCCChHHHHHhhhc--
Q 022578 1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-- 70 (295)
|||+.-+|.+.+..|+ ..|..|+++.+........... .......+.......+.+|+++++.++++++.
T Consensus 56 tGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~ 135 (401)
T 4ggo_A 56 LGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAK 135 (401)
T ss_dssp ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHH
Confidence 6999999999999987 6799999999887664333211 01122344456788999999999888887765
Q ss_pred ---CCCcEEEEcccC
Q 022578 71 ---KGFDVVYDINGR 82 (295)
Q Consensus 71 ---~~~d~vi~~a~~ 82 (295)
-++|++||.++.
T Consensus 136 ~~~G~IDiLVhS~A~ 150 (401)
T 4ggo_A 136 KKGIKFDLIVYSLAS 150 (401)
T ss_dssp HTTCCEEEEEECCCC
T ss_pred HhcCCCCEEEEeccc
Confidence 389999999885
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0023 Score=47.83 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=53.3
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh--HHHHHhhhc----CCCcEEE
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSA----KGFDVVY 77 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~~~~~~~~~----~~~d~vi 77 (295)
+|.++...++.|.+.|++|++..|....... .. .......+....+..+.+|++++ +++.++++. .+-|++|
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~-~~-~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV 102 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDA-HP-DEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV 102 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTS-CT-THHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccc-cc-cHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 5789999999999999999988776554211 10 00112222334566778899988 887766643 3449999
Q ss_pred EcccCC
Q 022578 78 DINGRE 83 (295)
Q Consensus 78 ~~a~~~ 83 (295)
||+|..
T Consensus 103 nnAgg~ 108 (157)
T 3gxh_A 103 HCLANY 108 (157)
T ss_dssp ECSBSH
T ss_pred ECCCCC
Confidence 999874
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00041 Score=73.68 Aligned_cols=82 Identities=11% Similarity=0.068 Sum_probs=57.7
Q ss_pred CCcCCc-chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---------
Q 022578 1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------- 70 (295)
Q Consensus 1 tGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--------- 70 (295)
|||++. ||..+++.|++.|.+|++.+|+..............++......+..+.+|++|.++++.+++.
T Consensus 2142 TGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~f 2221 (3089)
T 3zen_D 2142 TGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESL 2221 (3089)
T ss_dssp ESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEE
T ss_pred eCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhc
Confidence 799998 9999999999999999999998765100000000001111123577899999999998887542
Q ss_pred CCCcEEEEcccC
Q 022578 71 KGFDVVYDINGR 82 (295)
Q Consensus 71 ~~~d~vi~~a~~ 82 (295)
-.+|++||+||.
T Consensus 2222 G~IDILVNNAGi 2233 (3089)
T 3zen_D 2222 GPQSIHLKDAQT 2233 (3089)
T ss_dssp SSSEEEECCCCC
T ss_pred CCCCEEEECCCc
Confidence 258999999986
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00035 Score=59.62 Aligned_cols=92 Identities=11% Similarity=0.024 Sum_probs=59.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHH----HhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK----SSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~----~~~~~~~~d~v 76 (295)
+|++|.+|..+++.+...|.+|++++|++++... ..+ .+.+.+ .|+.+.+++. +.... ++|+|
T Consensus 176 ~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~---------~~~--~g~~~~-~d~~~~~~~~~~~~~~~~~-~~D~v 242 (347)
T 2hcy_A 176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL---------FRS--IGGEVF-IDFTKEKDIVGAVLKATDG-GAHGV 242 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH---------HHH--TTCCEE-EETTTCSCHHHHHHHHHTS-CEEEE
T ss_pred ECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH---------HHH--cCCceE-EecCccHhHHHHHHHHhCC-CCCEE
Confidence 5899999999999999999999999988766311 111 122222 3666433333 33333 79999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
|++++. .......++.++...++|.+++.
T Consensus 243 i~~~g~-~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 243 INVSVS-EAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp EECSSC-HHHHHHHTTSEEEEEEEEECCCC
T ss_pred EECCCc-HHHHHHHHHHHhcCCEEEEEeCC
Confidence 999874 23444455555533588877653
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0016 Score=55.38 Aligned_cols=92 Identities=17% Similarity=0.105 Sum_probs=62.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH---HHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~vi 77 (295)
+|++|.+|..+++.+...|++|++++|++++... ..+. +.+.+ .|..+.+ .+.+.....++|+||
T Consensus 173 ~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~---------~~~~--ga~~~-~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR---------AKAL--GADET-VNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp CSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHH--TCSEE-EETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHhc--CCCEE-EcCCcccHHHHHHHHhCCCCceEEE
Confidence 6899999999999999999999999998665221 1111 22222 3665543 333333323799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+++| .......++.++...+++.+++.
T Consensus 241 ~~~g--~~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 241 DHTG--ALYFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp ESSC--SSSHHHHHHHEEEEEEEEESSCC
T ss_pred ECCC--HHHHHHHHHhhccCCEEEEEecC
Confidence 9998 35677788888844488887754
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00028 Score=55.64 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=49.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccC-CeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+||+|++|+.+++.|.+.|++|++++|++++.... .+... .+. ..|+. .+++.++++ ++|+||++
T Consensus 6 iGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~--~~~~~-~~~~~~~~~--~~D~Vi~~ 71 (212)
T 1jay_A 6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK---------AAEYRRIAG--DASIT-GMKNEDAAE--ACDIAVLT 71 (212)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH---------HHHHHHHHS--SCCEE-EEEHHHHHH--HCSEEEEC
T ss_pred EcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHHhccccc--cCCCC-hhhHHHHHh--cCCEEEEe
Confidence 47899999999999999999999999986652211 10000 000 01111 123556677 89999999
Q ss_pred ccCChhcHHHHHHhC
Q 022578 80 NGREADEVEPILDAL 94 (295)
Q Consensus 80 a~~~~~~~~~ll~~~ 94 (295)
... .....+++.+
T Consensus 72 ~~~--~~~~~~~~~l 84 (212)
T 1jay_A 72 IPW--EHAIDTARDL 84 (212)
T ss_dssp SCH--HHHHHHHHHT
T ss_pred CCh--hhHHHHHHHH
Confidence 863 3445555544
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0015 Score=55.85 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=60.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHH---HHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---~~~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|.+|++++|++++... ..+. +.+. ..|..+.+. +.+.....++|+||
T Consensus 169 ~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi 236 (354)
T 2j8z_A 169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM---------AEKL--GAAA-GFNYKKEDFSEATLKFTKGAGVNLIL 236 (354)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHH--TCSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHHc--CCcE-EEecCChHHHHHHHHHhcCCCceEEE
Confidence 6899999999999999999999999988765221 1111 2222 235554433 33333324799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+++|.. .....++.++...+++.++.
T Consensus 237 ~~~G~~--~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 237 DCIGGS--YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp ESSCGG--GHHHHHHHEEEEEEEEECCC
T ss_pred ECCCch--HHHHHHHhccCCCEEEEEec
Confidence 999863 56666777774458887764
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0016 Score=55.09 Aligned_cols=91 Identities=21% Similarity=0.224 Sum_probs=61.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+||+|.+|...++.+...|.+|+++++++++... ..+ .+.+.+ .|..+. +.+.+.....++|+||
T Consensus 155 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~--~ga~~~-~~~~~~~~~~~~~~~~~~~g~D~vi 222 (334)
T 3qwb_A 155 FAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI---------AKE--YGAEYL-INASKEDILRQVLKFTNGKGVDASF 222 (334)
T ss_dssp SSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHH--TTCSEE-EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHH--cCCcEE-EeCCCchHHHHHHHHhCCCCceEEE
Confidence 5889999999999999999999999997665221 111 122222 234333 3344444334799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+++|. ......++.++...++|.++.
T Consensus 223 d~~g~--~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 223 DSVGK--DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp ECCGG--GGHHHHHHHEEEEEEEEECCC
T ss_pred ECCCh--HHHHHHHHHhccCCEEEEEcC
Confidence 99985 566777888874458887764
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0015 Score=54.88 Aligned_cols=94 Identities=20% Similarity=0.178 Sum_probs=56.7
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+||+|++|..++..|+..| .+|.++++++.... ...+.......++... ...++++++++ ++|+||+
T Consensus 6 iGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~-------a~dL~~~~~~~~l~~~--~~t~d~~~a~~--~aDvVvi 74 (314)
T 1mld_A 6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-------AADLSHIETRATVKGY--LGPEQLPDCLK--GCDVVVI 74 (314)
T ss_dssp ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-------HHHHTTSSSSCEEEEE--ESGGGHHHHHT--TCSEEEE
T ss_pred ECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHH-------HHHHhccCcCceEEEe--cCCCCHHHHhC--CCCEEEE
Confidence 5889999999999999888 79999999872110 0011111111111110 01234667888 9999999
Q ss_pred cccCCh--------------hcHHHHHHhCC---CCCcEEEeec
Q 022578 79 INGREA--------------DEVEPILDALP---NLEQFIYCSS 105 (295)
Q Consensus 79 ~a~~~~--------------~~~~~ll~~~~---~~~~~i~~Ss 105 (295)
+++... ...+.+++.+. ...++|++|-
T Consensus 75 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 998632 23555665554 3346776653
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0015 Score=55.14 Aligned_cols=92 Identities=16% Similarity=0.074 Sum_probs=60.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|.+|+++++++++... ..+. +.+.+ .|..+. +.+.+.....++|+||
T Consensus 147 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~--Ga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvi 214 (325)
T 3jyn_A 147 HAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAH---------AKAL--GAWET-IDYSHEDVAKRVLELTDGKKCPVVY 214 (325)
T ss_dssp SSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH---------HHHH--TCSEE-EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCCEE-EeCCCccHHHHHHHHhCCCCceEEE
Confidence 5899999999999999999999999988766221 1111 22222 244443 3344444334799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+++|. ......++.++...+++.++..
T Consensus 215 d~~g~--~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 215 DGVGQ--DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp ESSCG--GGHHHHHTTEEEEEEEEECCCT
T ss_pred ECCCh--HHHHHHHHHhcCCCEEEEEecC
Confidence 99985 4556666767644588877643
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0042 Score=52.89 Aligned_cols=92 Identities=16% Similarity=0.228 Sum_probs=61.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+||+|.+|...++.+...|.+|+++++++++... ..+. +.+.+ .|..+. +.+.+.....++|+||
T Consensus 171 ~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~~--Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~vi 238 (349)
T 3pi7_A 171 TAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL---------LKDI--GAAHV-LNEKAPDFEATLREVMKAEQPRIFL 238 (349)
T ss_dssp SSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHH---------HHHH--TCSEE-EETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCCEE-EECCcHHHHHHHHHHhcCCCCcEEE
Confidence 5899999999999999899999999988766321 1111 22222 233333 3333333324899999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+++|.. .....+++++...++|.++..
T Consensus 239 d~~g~~--~~~~~~~~l~~~G~iv~~G~~ 265 (349)
T 3pi7_A 239 DAVTGP--LASAIFNAMPKRARWIIYGRL 265 (349)
T ss_dssp ESSCHH--HHHHHHHHSCTTCEEEECCCS
T ss_pred ECCCCh--hHHHHHhhhcCCCEEEEEecc
Confidence 999853 346778888855688887653
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0013 Score=52.71 Aligned_cols=76 Identities=12% Similarity=-0.043 Sum_probs=57.3
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEcccC
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR 82 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~~ 82 (295)
.|.+|+.+++.|.+.|+ |++++++++.... .. .++.++.+|.++++.+.++ ++ +.|.||.+.+.
T Consensus 17 ~G~~G~~la~~L~~~g~-v~vid~~~~~~~~----------~~--~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~~ 81 (234)
T 2aef_A 17 WSESTLECLRELRGSEV-FVLAEDENVRKKV----------LR--SGANFVHGDPTRVSDLEKANVR--GARAVIVDLES 81 (234)
T ss_dssp CCHHHHHHHHHSTTSEE-EEEESCGGGHHHH----------HH--TTCEEEESCTTCHHHHHHTTCT--TCSEEEECCSC
T ss_pred CChHHHHHHHHHHhCCe-EEEEECCHHHHHH----------Hh--cCCeEEEcCCCCHHHHHhcCcc--hhcEEEEcCCC
Confidence 49999999999999999 9999988765211 11 4688999999999999877 77 99999988764
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
. .....++..++
T Consensus 82 d-~~n~~~~~~a~ 93 (234)
T 2aef_A 82 D-SETIHCILGIR 93 (234)
T ss_dssp H-HHHHHHHHHHH
T ss_pred c-HHHHHHHHHHH
Confidence 2 23333344444
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0015 Score=56.97 Aligned_cols=79 Identities=15% Similarity=0.222 Sum_probs=61.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~ 81 (295)
|.|.+|+.+++.|.+.|++|+++++++....... ..++.++.+|.++++.+..+ ++ +.|+||-+.+
T Consensus 11 G~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-----------~~g~~vi~GDat~~~~L~~agi~--~A~~viv~~~ 77 (413)
T 3l9w_A 11 GFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-----------KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID 77 (413)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-----------HTTCCCEESCTTCHHHHHHTTTT--TCSEEEECCS
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----------hCCCeEEEcCCCCHHHHHhcCCC--ccCEEEECCC
Confidence 4699999999999999999999999987743211 24788999999999999887 66 8999998876
Q ss_pred CChhcHHHHHHhCC
Q 022578 82 READEVEPILDALP 95 (295)
Q Consensus 82 ~~~~~~~~ll~~~~ 95 (295)
. ......++..++
T Consensus 78 ~-~~~n~~i~~~ar 90 (413)
T 3l9w_A 78 D-PQTNLQLTEMVK 90 (413)
T ss_dssp S-HHHHHHHHHHHH
T ss_pred C-hHHHHHHHHHHH
Confidence 4 344444455554
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0059 Score=52.26 Aligned_cols=92 Identities=20% Similarity=0.135 Sum_probs=60.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH---HHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|.+|+++++++++... ..+ -+.+.+ .|..+.+ .+.+.. ..++|+||
T Consensus 170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~---------~~~--~Ga~~~-~~~~~~~~~~~~~~~~-~~g~D~vi 236 (362)
T 2c0c_A 170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF---------LKS--LGCDRP-INYKTEPVGTVLKQEY-PEGVDVVY 236 (362)
T ss_dssp TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHH--TTCSEE-EETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHH--cCCcEE-EecCChhHHHHHHHhc-CCCCCEEE
Confidence 5899999999999999999999999988655211 111 122222 2433322 222222 23799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
+++|. ......+++++...++|.+++..
T Consensus 237 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~ 264 (362)
T 2c0c_A 237 ESVGG--AMFDLAVDALATKGRLIVIGFIS 264 (362)
T ss_dssp ECSCT--HHHHHHHHHEEEEEEEEECCCGG
T ss_pred ECCCH--HHHHHHHHHHhcCCEEEEEeCCC
Confidence 99985 45667777777445888887654
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0021 Score=54.90 Aligned_cols=93 Identities=15% Similarity=0.150 Sum_probs=60.9
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH---HHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~v 76 (295)
+||+|.+|..+++.+...|. +|+++++++++.... .+. -+.+. ..|..+.+ .+.+.... ++|+|
T Consensus 167 ~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~---------~~~-~g~~~-~~d~~~~~~~~~~~~~~~~-~~d~v 234 (357)
T 2zb4_A 167 SGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILL---------TSE-LGFDA-AINYKKDNVAEQLRESCPA-GVDVY 234 (357)
T ss_dssp SSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH---------HHT-SCCSE-EEETTTSCHHHHHHHHCTT-CEEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH---------HHH-cCCce-EEecCchHHHHHHHHhcCC-CCCEE
Confidence 68999999999999999999 999999886552111 110 12222 24555433 33333332 69999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
|+++|. ......++.++...++|.++...
T Consensus 235 i~~~G~--~~~~~~~~~l~~~G~iv~~G~~~ 263 (357)
T 2zb4_A 235 FDNVGG--NISDTVISQMNENSHIILCGQIS 263 (357)
T ss_dssp EESCCH--HHHHHHHHTEEEEEEEEECCCGG
T ss_pred EECCCH--HHHHHHHHHhccCcEEEEECCcc
Confidence 999984 45566667666445888877543
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.00081 Score=57.22 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=58.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh----HHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~----~~~~~~~~~~~~d~v 76 (295)
+||+|.+|..+++.+...|.+|++++|++.+.... .+. -+.+.+ .|..+. +.+.+... .++|+|
T Consensus 162 ~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~---------~~~-~g~~~~-~d~~~~~~~~~~~~~~~~-~~~d~v 229 (345)
T 2j3h_A 162 SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLL---------KTK-FGFDDA-FNYKEESDLTAALKRCFP-NGIDIY 229 (345)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------HHT-SCCSEE-EETTSCSCSHHHHHHHCT-TCEEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHH-cCCceE-EecCCHHHHHHHHHHHhC-CCCcEE
Confidence 68999999999999999999999999887652211 100 122222 355443 23333222 379999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
|+++|. ......++.++...+++.++..
T Consensus 230 i~~~g~--~~~~~~~~~l~~~G~~v~~G~~ 257 (345)
T 2j3h_A 230 FENVGG--KMLDAVLVNMNMHGRIAVCGMI 257 (345)
T ss_dssp EESSCH--HHHHHHHTTEEEEEEEEECCCG
T ss_pred EECCCH--HHHHHHHHHHhcCCEEEEEccc
Confidence 999985 3555566666644588877653
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0058 Score=51.86 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=59.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-hHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~ 79 (295)
+||+|.+|..+++.+...|.+|+++++++++... ..+. .-..++..+ .+ .+.+.+.....++|+||++
T Consensus 166 ~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~-ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~ 234 (342)
T 4eye_A 166 LGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF---------VKSV-GADIVLPLE-EGWAKAVREATGGAGVDMVVDP 234 (342)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHHH-TCSEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhc-CCcEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence 5899999999999999999999999998766311 1111 122233333 22 2334444443479999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+|.. .....++.++...+++.++.
T Consensus 235 ~g~~--~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 235 IGGP--AFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp CC----CHHHHHHTEEEEEEEEEC--
T ss_pred Cchh--HHHHHHHhhcCCCEEEEEEc
Confidence 9863 56667777774458887764
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0031 Score=53.25 Aligned_cols=93 Identities=14% Similarity=0.246 Sum_probs=59.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---CCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~~~d~vi 77 (295)
+||+|.+|..+++.+...|++|++++|++++.... .+ .+.+. ..|..+.+++.+.+.+ .++|+||
T Consensus 152 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~---------~~--~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi 219 (333)
T 1v3u_A 152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL---------KQ--IGFDA-AFNYKTVNSLEEALKKASPDGYDCYF 219 (333)
T ss_dssp ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------HH--TTCSE-EEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------Hh--cCCcE-EEecCCHHHHHHHHHHHhCCCCeEEE
Confidence 58999999999999999999999999876552111 11 12222 2466552233333221 3699999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
+++|. ......++.++...+++.++...
T Consensus 220 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~~ 247 (333)
T 1v3u_A 220 DNVGG--EFLNTVLSQMKDFGKIAICGAIS 247 (333)
T ss_dssp ESSCH--HHHHHHHTTEEEEEEEEECCCCC
T ss_pred ECCCh--HHHHHHHHHHhcCCEEEEEeccc
Confidence 99985 23455555555445888776543
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0042 Score=52.98 Aligned_cols=91 Identities=16% Similarity=0.139 Sum_probs=60.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|.+|+++++++++... ..+. +.+.+ .|..+. +.+.+.. ..++|+||
T Consensus 174 ~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~~-~~~~~~~~~~~~~~~~-~~g~Dvvi 240 (353)
T 4dup_A 174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA---------CERL--GAKRG-INYRSEDFAAVIKAET-GQGVDIIL 240 (353)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHH--TCSEE-EETTTSCHHHHHHHHH-SSCEEEEE
T ss_pred EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhc--CCCEE-EeCCchHHHHHHHHHh-CCCceEEE
Confidence 5899999999999999999999999998766321 1111 22221 244333 3333333 35899999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+++|.. .....++.++...+++.++..
T Consensus 241 d~~g~~--~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 241 DMIGAA--YFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp ESCCGG--GHHHHHHTEEEEEEEEECCCT
T ss_pred ECCCHH--HHHHHHHHhccCCEEEEEEec
Confidence 999853 556667777744578877643
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0028 Score=53.60 Aligned_cols=94 Identities=18% Similarity=0.265 Sum_probs=60.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhh--cCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~--~~~~d~vi~ 78 (295)
+||+|.+|..+++.+...|.+|++++|++++..... .+ .+.+.+ .|..+.+..+.+.+ ..++|+||+
T Consensus 156 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--------~~--~g~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~ 224 (336)
T 4b7c_A 156 SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV--------EE--LGFDGA-IDYKNEDLAAGLKRECPKGIDVFFD 224 (336)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HT--TCCSEE-EETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HH--cCCCEE-EECCCHHHHHHHHHhcCCCceEEEE
Confidence 689999999999999999999999998876632110 11 122222 34444332222221 237999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
++|. ......++.++...++|.++...
T Consensus 225 ~~g~--~~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 225 NVGG--EILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp SSCH--HHHHHHHTTEEEEEEEEECCCGG
T ss_pred CCCc--chHHHHHHHHhhCCEEEEEeecc
Confidence 9984 34555666666445888887655
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0054 Score=51.97 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=59.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|.+|+++++++++... ..+. +.+.+ .|..+. +.+.+.....++|+||
T Consensus 151 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~l--ga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvi 218 (340)
T 3gms_A 151 NACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE---------LLRL--GAAYV-IDTSTAPLYETVMELTNGIGADAAI 218 (340)
T ss_dssp SSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHH--TCSEE-EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhC--CCcEE-EeCCcccHHHHHHHHhCCCCCcEEE
Confidence 5889999999999988889999999998776321 1111 22222 244433 3344444434899999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+++|.. .....++.++...+++.++..
T Consensus 219 d~~g~~--~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 219 DSIGGP--DGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp ESSCHH--HHHHHHHTEEEEEEEEECCCT
T ss_pred ECCCCh--hHHHHHHHhcCCCEEEEEeec
Confidence 998853 344555666644588877643
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0027 Score=54.12 Aligned_cols=90 Identities=11% Similarity=0.161 Sum_probs=59.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHH---HHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---~~~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|++|++++|++++... ..+ .+.+. ..|..+.+. +.+.....++|+||
T Consensus 177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~--~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQKI---------VLQ--NGAHE-VFNHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHH--TTCSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH---------HHH--cCCCE-EEeCCCchHHHHHHHHcCCCCcEEEE
Confidence 5899999999999999999999999988765321 111 12222 235555433 33333323799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEee
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
+++|. ......++.++...+++.++
T Consensus 245 ~~~G~--~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 245 EMLAN--VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred ECCCh--HHHHHHHHhccCCCEEEEEe
Confidence 99985 24555666666445788766
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0021 Score=53.60 Aligned_cols=89 Identities=16% Similarity=0.129 Sum_probs=58.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|++|.+|..+++.+...|.+|+++++++.+... ..+ .+.+.+ .|..+.+.+.+.+. ++|+||+ +
T Consensus 132 ~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~--~ga~~~-~~~~~~~~~~~~~~--~~d~vid-~ 196 (302)
T 1iz0_A 132 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL---------PLA--LGAEEA-ATYAEVPERAKAWG--GLDLVLE-V 196 (302)
T ss_dssp SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH---------HHH--TTCSEE-EEGGGHHHHHHHTT--SEEEEEE-C
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHh--cCCCEE-EECCcchhHHHHhc--CceEEEE-C
Confidence 5899999999999999999999999997766321 111 123322 35444133444445 8999999 8
Q ss_pred cCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 81 GREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
|. ......++.++...+++.++..
T Consensus 197 g~--~~~~~~~~~l~~~G~~v~~g~~ 220 (302)
T 1iz0_A 197 RG--KEVEESLGLLAHGGRLVYIGAA 220 (302)
T ss_dssp SC--TTHHHHHTTEEEEEEEEEC---
T ss_pred CH--HHHHHHHHhhccCCEEEEEeCC
Confidence 76 4566777777744478876643
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=96.13 E-value=0.027 Score=47.06 Aligned_cols=84 Identities=14% Similarity=0.193 Sum_probs=59.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|++... .++.... ..++++++++ ++|+|+.+...
T Consensus 146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~~~----~~~~l~ell~--~aDiV~l~~Pl 203 (315)
T 3pp8_A 146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSW----------------PGVESYV----GREELRAFLN--QTRVLINLLPN 203 (315)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEEESSCCCC----------------TTCEEEE----SHHHHHHHHH--TCSEEEECCCC
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEcCCchhh----------------hhhhhhc----ccCCHHHHHh--hCCEEEEecCC
Confidence 579999999999999999999999987652 2232222 2367888999 99999988764
Q ss_pred Chh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ + ....+..++...-+|.+|...+
T Consensus 204 t~~t~~li~~~~l~~mk~gailIN~aRG~~ 233 (315)
T 3pp8_A 204 TAQTVGIINSELLDQLPDGAYVLNLARGVH 233 (315)
T ss_dssp CGGGTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred chhhhhhccHHHHhhCCCCCEEEECCCChh
Confidence 322 1 2445555665567888887654
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.019 Score=47.58 Aligned_cols=93 Identities=10% Similarity=0.032 Sum_probs=51.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCC--CchhhhhccCCeEEEEecCCChHHHHHhhhc------CCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD 74 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d 74 (295)
|.|.+|..+++.|++.||+|++.+|++++.......- ......+.....+++..-+.++..+...+.. ..-+
T Consensus 12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~ 91 (297)
T 4gbj_A 12 GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDG 91 (297)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTC
T ss_pred ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCe
Confidence 5799999999999999999999999988754332210 0001112223444555555555444433211 1445
Q ss_pred EEEEcccCChhcHHHHHHhCC
Q 022578 75 VVYDINGREADEVEPILDALP 95 (295)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~ 95 (295)
++|++....+..++.+.+.+.
T Consensus 92 iiid~sT~~p~~~~~~~~~~~ 112 (297)
T 4gbj_A 92 VHVSMSTISPETSRQLAQVHE 112 (297)
T ss_dssp EEEECSCCCHHHHHHHHHHHH
T ss_pred EEEECCCCChHHHHHHHHHHH
Confidence 777777777777777777665
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.00039 Score=58.81 Aligned_cols=94 Identities=13% Similarity=0.041 Sum_probs=55.7
Q ss_pred CCcCCcchHHHHHHHHHCCC--e-----EEEEecCCC--ccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--Q-----VTLFTRGKA--PIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~ 70 (295)
|||+|+||++++..|+..+. + +.++++.+. ..... ...+... .+-.. ++...+...+.++
T Consensus 9 ~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~-----a~DL~~~~~~~~~----~~~~~~~~~~~~~- 78 (333)
T 5mdh_A 9 TGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGV-----LMELQDCALPLLK----DVIATDKEEIAFK- 78 (333)
T ss_dssp SSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHH-----HHHHHHTCCTTEE----EEEEESCHHHHTT-
T ss_pred ECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhh-----HhhhHhhhhcccC----CEEEcCCcHHHhC-
Confidence 69999999999999998764 4 888888642 11000 0011111 01111 1111223456777
Q ss_pred CCCcEEEEcccC--------------ChhcHHHHHHhCC--CCC--cEEEeec
Q 022578 71 KGFDVVYDINGR--------------EADEVEPILDALP--NLE--QFIYCSS 105 (295)
Q Consensus 71 ~~~d~vi~~a~~--------------~~~~~~~ll~~~~--~~~--~~i~~Ss 105 (295)
++|+||++||. |....+++++++. +.. +++.+|-
T Consensus 79 -daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 79 -DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp -TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred -CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 99999999986 3345677777766 332 4666664
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0087 Score=48.12 Aligned_cols=95 Identities=14% Similarity=0.182 Sum_probs=63.6
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhh---hcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~---~~~~~d~v 76 (295)
+|++|.+|+.+++.+.+. ++++.+......... .+.. .+.+ +..|++.++.....+ .+.++++|
T Consensus 6 ~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~---------~~~~--~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~V 73 (245)
T 1p9l_A 6 LGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS---------LLTD--GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV 73 (245)
T ss_dssp ETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH---------HHHH--TTCC-EEEECSCTTTHHHHHHHHHHTTCEEE
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH---------HHhc--cCCc-EEEEccChHHHHHHHHHHHHcCCCEE
Confidence 488999999999999876 899987765443211 1111 2344 567888887766544 33689999
Q ss_pred EEcccCChhcHHHHHHhCC-C-CCcEEEeeccc
Q 022578 77 YDINGREADEVEPILDALP-N-LEQFIYCSSAG 107 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~-~-~~~~i~~Ss~~ 107 (295)
+-+.|.+.+....+.++++ . ...+++.+..+
T Consensus 74 igTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~s 106 (245)
T 1p9l_A 74 VGTTGFTAERFQQVESWLVAKPNTSVLIAPNFA 106 (245)
T ss_dssp ECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCC
T ss_pred EcCCCCCHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 9998887776666666665 3 34566655543
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0043 Score=52.78 Aligned_cols=91 Identities=15% Similarity=0.224 Sum_probs=53.8
Q ss_pred CCcCCcchHHHHHHHHHCC-----C-eEEEEecCCCc---cccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC
Q 022578 1 MGGTRFIGVFLSRLLVKEG-----H-QVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 71 (295)
.||||++|+.+++.|++++ + +|+++.+..+. .....+. +.. ...+.+ .|+ +++ .+.
T Consensus 15 vGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~-----l~~-~~~~~~--~~~-~~~----~~~-- 79 (352)
T 2nqt_A 15 AGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPH-----LTP-LAHRVV--EPT-EAA----VLG-- 79 (352)
T ss_dssp ETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTT-----CGG-GTTCBC--EEC-CHH----HHT--
T ss_pred ECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccc-----ccc-cceeee--ccC-CHH----Hhc--
Confidence 4999999999999999887 3 77777643321 1111110 000 011222 232 232 355
Q ss_pred CCcEEEEcccCChhcHHHHHHhCCCCCcEEEeecccc
Q 022578 72 GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 72 ~~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
++|+||.+.+.. ....++..++...++|-+|+..-
T Consensus 80 ~~DvVf~alg~~--~s~~~~~~~~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 80 GHDAVFLALPHG--HSAVLAQQLSPETLIIDCGADFR 114 (352)
T ss_dssp TCSEEEECCTTS--CCHHHHHHSCTTSEEEECSSTTT
T ss_pred CCCEEEECCCCc--chHHHHHHHhCCCEEEEECCCcc
Confidence 899999998754 34555555562258888888654
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0025 Score=54.04 Aligned_cols=77 Identities=13% Similarity=-0.007 Sum_probs=58.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~ 81 (295)
|.|.+|+.+++.|.+.|+ |++++++++... +. ..++.++.+|.+|++.++++ ++ +.|.|+-+.+
T Consensus 122 G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~----------~~~~~~i~gd~~~~~~L~~a~i~--~a~~vi~~~~ 186 (336)
T 1lnq_A 122 GWSESTLECLRELRGSEV-FVLAEDENVRKK--VL----------RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLE 186 (336)
T ss_dssp SCCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HH----------HTTCEEEESCTTSHHHHHHTCST--TEEEEEECCS
T ss_pred CCcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HH----------hCCcEEEEeCCCCHHHHHhcChh--hccEEEEcCC
Confidence 359999999999999999 999998887632 11 15789999999999999887 77 8999998876
Q ss_pred CChhcHHHHHHhCC
Q 022578 82 READEVEPILDALP 95 (295)
Q Consensus 82 ~~~~~~~~ll~~~~ 95 (295)
.. +....++..++
T Consensus 187 ~d-~~n~~~~~~ar 199 (336)
T 1lnq_A 187 SD-SETIHCILGIR 199 (336)
T ss_dssp SH-HHHHHHHHHHH
T ss_pred cc-HHHHHHHHHHH
Confidence 43 33333333444
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.02 Score=50.46 Aligned_cols=92 Identities=13% Similarity=0.150 Sum_probs=60.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeE-EEEe---cCCC----------------
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKG---DRKD---------------- 60 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~---D~~~---------------- 60 (295)
+||+|.||...++.+...|.+|+++++++.+... ..+. +.+ ++.. |+.+
T Consensus 227 ~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~---------~~~l--Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 227 WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAA---------VRAL--GCDLVINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHT--TCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhc--CCCEEEecccccccccccccccccchhhhHH
Confidence 5899999999999999999999999987655221 1111 222 2211 1110
Q ss_pred hHHHHHhhhcCCCcEEEEcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 61 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
.+.+.+.. ..++|+||+++|. ......++.++...++|.+++.
T Consensus 296 ~~~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~~ 338 (447)
T 4a0s_A 296 AKLVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGGTVVTCGSS 338 (447)
T ss_dssp HHHHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTCEEEESCCT
T ss_pred HHHHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCCEEEEEecC
Confidence 23344443 3479999999985 3566677778855688887754
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.014 Score=48.53 Aligned_cols=93 Identities=11% Similarity=0.069 Sum_probs=59.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCC--CCchhhhhccCCeEEEEecCCChHHHHHhhhcC--------C
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------G 72 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--------~ 72 (295)
|.|.+|..+++.|++.||+|++.+|++++....... .......+...+.+++..-+.+.+.+++++... .
T Consensus 10 GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~ 89 (300)
T 3obb_A 10 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP 89 (300)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC
T ss_pred eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC
Confidence 579999999999999999999999998774321100 000001112234556666667777777666421 1
Q ss_pred CcEEEEcccCChhcHHHHHHhCC
Q 022578 73 FDVVYDINGREADEVEPILDALP 95 (295)
Q Consensus 73 ~d~vi~~a~~~~~~~~~ll~~~~ 95 (295)
=++||++....+..++.+.+.++
T Consensus 90 g~iiId~sT~~p~~~~~~a~~~~ 112 (300)
T 3obb_A 90 GTLVLECSTIAPTSARKIHAAAR 112 (300)
T ss_dssp -CEEEECSCCCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHH
Confidence 25677777777777777777765
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.0035 Score=53.71 Aligned_cols=90 Identities=12% Similarity=0.186 Sum_probs=60.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhcc-CCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+|+ |-+|..+++.|...|.+|++++|++++.... .+.. ..+..+ ..+.+.+.+.+. ++|+||++
T Consensus 173 iGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~---------~~~~~~~~~~~---~~~~~~~~~~~~--~~DvVI~~ 237 (361)
T 1pjc_A 173 LGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYL---------ETLFGSRVELL---YSNSAEIETAVA--EADLLIGA 237 (361)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHHGGGSEEE---ECCHHHHHHHHH--TCSEEEEC
T ss_pred ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH---------HHhhCceeEee---eCCHHHHHHHHc--CCCEEEEC
Confidence 466 9999999999999999999999987662211 1111 122222 234566777887 89999999
Q ss_pred ccCChh-----cHHHHHHhCCCCCcEEEeec
Q 022578 80 NGREAD-----EVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 80 a~~~~~-----~~~~ll~~~~~~~~~i~~Ss 105 (295)
++.... -....++.++....++.++.
T Consensus 238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 238 VLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 875321 14556677775557777664
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.0067 Score=51.10 Aligned_cols=91 Identities=16% Similarity=0.095 Sum_probs=56.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH-HHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~d~vi~~ 79 (295)
+||+|-+|...++.+...|.+|+++++++++... ..+ .+.+.+ .|..+.+ .....+...++|+||++
T Consensus 156 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~---------~~~--lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 156 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY---------LRV--LGAKEV-LAREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH---------HHH--TTCSEE-EECC---------CCSCCEEEEEEC
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHH--cCCcEE-EecCCcHHHHHHHhcCCcccEEEEC
Confidence 5889999999999998899999999998766221 111 122222 2333321 11122222479999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+|. ......++.++...+++.++.
T Consensus 224 ~g~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 224 VGG--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp STT--TTHHHHHHTEEEEEEEEECSC
T ss_pred CcH--HHHHHHHHhhccCCEEEEEee
Confidence 986 356667777774457877654
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.0087 Score=51.29 Aligned_cols=91 Identities=13% Similarity=0.163 Sum_probs=62.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|+ |.+|..+++.+...|.+|+++++++++..... .+ -+.+.+ .|..+.+.+.++.. ++|+||+++
T Consensus 194 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~--------~~--lGa~~v-~~~~~~~~~~~~~~--~~D~vid~~ 259 (366)
T 1yqd_A 194 VGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL--------KN--FGADSF-LVSRDQEQMQAAAG--TLDGIIDTV 259 (366)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH--------HT--SCCSEE-EETTCHHHHHHTTT--CEEEEEECC
T ss_pred ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------Hh--cCCceE-EeccCHHHHHHhhC--CCCEEEECC
Confidence 364 89999999999999999999998876632110 01 123222 36667777776665 899999999
Q ss_pred cCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 81 GREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
|.. ......++.++...++|.+++.
T Consensus 260 g~~-~~~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 260 SAV-HPLLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp SSC-CCSHHHHHHEEEEEEEEECCCC
T ss_pred CcH-HHHHHHHHHHhcCCEEEEEccC
Confidence 853 2345667777744588887753
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.049 Score=45.69 Aligned_cols=84 Identities=12% Similarity=0.090 Sum_probs=59.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|++.... .. . ..+. .++++++++ ++|+|+.+...
T Consensus 144 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~------------~--~~~~-----~~~l~ell~--~aDvV~l~lPl 201 (324)
T 3evt_A 144 GTGQIGQSLAAKASALGMHVIGVNTTGHPAD-HF------------H--ETVA-----FTATADALA--TANFIVNALPL 201 (324)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSCCCCT-TC------------S--EEEE-----GGGCHHHHH--HCSEEEECCCC
T ss_pred CcCHHHHHHHHHHHhCCCEEEEECCCcchhH-hH------------h--hccc-----cCCHHHHHh--hCCEEEEcCCC
Confidence 5799999999999999999999999876521 11 0 1111 235667888 89999988754
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++...-+|.+|...+
T Consensus 202 t~~t~~li~~~~l~~mk~gailIN~aRG~~ 231 (324)
T 3evt_A 202 TPTTHHLFSTELFQQTKQQPMLINIGRGPA 231 (324)
T ss_dssp CGGGTTCBSHHHHHTCCSCCEEEECSCGGG
T ss_pred chHHHHhcCHHHHhcCCCCCEEEEcCCChh
Confidence 322 13456677776668888887665
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.02 Score=47.25 Aligned_cols=81 Identities=16% Similarity=0.036 Sum_probs=58.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|++.... .++ ..++++++++ ++|+|+.+...
T Consensus 129 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~-------~~~~l~ell~--~aDiV~l~~P~ 183 (290)
T 3gvx_A 129 GYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN----------------VDV-------ISESPADLFR--QSDFVLIAIPL 183 (290)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSSCCCTT----------------CSE-------ECSSHHHHHH--HCSEEEECCCC
T ss_pred ccCchhHHHHHHHHhhCcEEEEEeccccccc----------------ccc-------ccCChHHHhh--ccCeEEEEeec
Confidence 5799999999999999999999999876521 111 1235667888 89999988765
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....+|.+|+..+
T Consensus 184 t~~t~~li~~~~l~~mk~gailIN~aRG~~ 213 (290)
T 3gvx_A 184 TDKTRGMVNSRLLANARKNLTIVNVARADV 213 (290)
T ss_dssp CTTTTTCBSHHHHTTCCTTCEEEECSCGGG
T ss_pred cccchhhhhHHHHhhhhcCceEEEeehhcc
Confidence 322 12456667776668888887664
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.0085 Score=50.10 Aligned_cols=73 Identities=10% Similarity=0.109 Sum_probs=50.3
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCC---ccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
+|+ |-+|+.++..|.+.|. +|+++.|+++ +..+. ..++... .+..+...++.+.+.+.+.+. ++|+|
T Consensus 160 lGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~l-----a~~~~~~-~~~~~~~~~~~~~~~l~~~l~--~aDiI 230 (315)
T 3tnl_A 160 CGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKT-----VEKINSK-TDCKAQLFDIEDHEQLRKEIA--ESVIF 230 (315)
T ss_dssp ECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHH-----HHHHHHH-SSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred ECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHH-----HHHhhhh-cCCceEEeccchHHHHHhhhc--CCCEE
Confidence 364 8899999999999998 8999999843 31110 0011111 134455567777778888888 89999
Q ss_pred EEcccC
Q 022578 77 YDINGR 82 (295)
Q Consensus 77 i~~a~~ 82 (295)
|++...
T Consensus 231 INaTp~ 236 (315)
T 3tnl_A 231 TNATGV 236 (315)
T ss_dssp EECSST
T ss_pred EECccC
Confidence 999754
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.0093 Score=51.26 Aligned_cols=92 Identities=15% Similarity=0.106 Sum_probs=56.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||+|-+|..+++.+...|.+|+++++ +.+.. ...+ -+.+.+ .|..+.+..+.+.+..++|+||+++
T Consensus 190 ~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~---------~~~~--lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~ 256 (375)
T 2vn8_A 190 LGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE---------LVRK--LGADDV-IDYKSGSVEEQLKSLKPFDFILDNV 256 (375)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH---------HHHH--TTCSEE-EETTSSCHHHHHHTSCCBSEEEESS
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH---------HHHH--cCCCEE-EECCchHHHHHHhhcCCCCEEEECC
Confidence 488999999999999889999998873 33311 1111 123322 2444443333333324899999999
Q ss_pred cCChhcHHHHHHhCCCCCcEEEeec
Q 022578 81 GREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|.........++.++...++|.+++
T Consensus 257 g~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 257 GGSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp CTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred CChhhhhHHHHHhhcCCcEEEEeCC
Confidence 8653322334444555568887764
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.038 Score=44.53 Aligned_cols=102 Identities=12% Similarity=0.121 Sum_probs=61.0
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCC-------CCC----CchhhhhccCCeE--EEEecCCChHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQL-------PGE----SDQEFAEFSSKIL--HLKGDRKDYDFVK 65 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~-------~~~----~~~~~~~~~~~v~--~~~~D~~~~~~~~ 65 (295)
|.|-+|+.+++.|...|. +|++++++.-.. ..+. .+. ....+....+.++ .+..+++ .+.+.
T Consensus 38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~ 116 (249)
T 1jw9_B 38 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-DAELA 116 (249)
T ss_dssp CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-HHHHH
T ss_pred eeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-HhHHH
Confidence 468899999999999997 899999886321 1111 000 0011222234444 4444454 45667
Q ss_pred HhhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccc
Q 022578 66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGV 108 (295)
Q Consensus 66 ~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v 108 (295)
+.++ ++|+||.+.. +...-..+.+++. ....+|+.+..+.
T Consensus 117 ~~~~--~~DvVi~~~d-~~~~~~~l~~~~~~~~~p~i~~~~~g~ 157 (249)
T 1jw9_B 117 ALIA--EHDLVLDCTD-NVAVRNQLNAGCFAAKVPLVSGAAIRM 157 (249)
T ss_dssp HHHH--TSSEEEECCS-SHHHHHHHHHHHHHHTCCEEEEEEEBT
T ss_pred HHHh--CCCEEEEeCC-CHHHHHHHHHHHHHcCCCEEEeeeccc
Confidence 7888 9999999875 3444344555555 3346777655443
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.028 Score=46.61 Aligned_cols=29 Identities=24% Similarity=0.450 Sum_probs=26.2
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCC
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 30 (295)
||.|.+|..++..|.+.|++|++.+|++.
T Consensus 28 Gg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 28 GGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp TTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred cCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 57999999999999999999999988754
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=95.45 E-value=0.025 Score=48.67 Aligned_cols=90 Identities=12% Similarity=0.113 Sum_probs=61.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-ccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+|+ |.+|..+++.+...|.+|++++|++.+... ..+ ....+ ..+..+.+.+.+.+. ++|+||++
T Consensus 174 iG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~---------~~~~~g~~~---~~~~~~~~~l~~~l~--~aDvVi~~ 238 (377)
T 2vhw_A 174 IGA-GTAGYNAARIANGMGATVTVLDINIDKLRQ---------LDAEFCGRI---HTRYSSAYELEGAVK--RADLVIGA 238 (377)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHTTTSS---EEEECCHHHHHHHHH--HCSEEEEC
T ss_pred ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH---------HHHhcCCee---EeccCCHHHHHHHHc--CCCEEEEC
Confidence 365 999999999999999999999998765211 011 11122 123345667888888 89999998
Q ss_pred ccCChh-----cHHHHHHhCCCCCcEEEeec
Q 022578 80 NGREAD-----EVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 80 a~~~~~-----~~~~ll~~~~~~~~~i~~Ss 105 (295)
++.... -.+..++.++....+|.+|+
T Consensus 239 ~~~p~~~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 239 VLVPGAKAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CCCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence 764321 14666777775568888884
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.0089 Score=52.56 Aligned_cols=31 Identities=23% Similarity=0.432 Sum_probs=28.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA 33 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 33 (295)
|+|++|..++..|++.|++|++.+|++++..
T Consensus 15 GlG~vG~~~A~~La~~G~~V~~~D~~~~kv~ 45 (446)
T 4a7p_A 15 GTGYVGLVSGACFSDFGHEVVCVDKDARKIE 45 (446)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCSTTHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 6899999999999999999999999998743
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.036 Score=40.25 Aligned_cols=76 Identities=12% Similarity=0.125 Sum_probs=48.5
Q ss_pred CcC---CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 2 Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+| |.+|+.+++.|++.|++|+.++++.... .++..+ .++.++.+ .+|+++-
T Consensus 21 GaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i----------------~G~~~~-------~s~~el~~--~vDlvii 75 (138)
T 1y81_A 21 GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLKCY-------RSVRELPK--DVDVIVF 75 (138)
T ss_dssp TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEECB-------SSGGGSCT--TCCEEEE
T ss_pred eecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE----------------CCeeec-------CCHHHhCC--CCCEEEE
Confidence 554 8999999999999999988777654331 122211 22334445 7999998
Q ss_pred cccCChhcHHHHHHhCC--CCCcEEEee
Q 022578 79 INGREADEVEPILDALP--NLEQFIYCS 104 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~--~~~~~i~~S 104 (295)
+.. ......+++.+. +++.++..+
T Consensus 76 ~vp--~~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 76 VVP--PKVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp CSC--HHHHHHHHHHHHHTTCCEEEECT
T ss_pred EeC--HHHHHHHHHHHHHcCCCEEEEcC
Confidence 875 355555555443 666655544
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.0059 Score=53.67 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=27.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|++|..++..|.+.|++|++++|++++.
T Consensus 7 G~G~vG~~~A~~la~~G~~V~~~d~~~~~~ 36 (436)
T 1mv8_A 7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKI 36 (436)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 489999999999999999999999987663
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.017 Score=49.36 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=27.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|++.|++|++.+|++++.
T Consensus 29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~~ 58 (358)
T 4e21_A 29 GLGRMGADMVRRLRKGGHECVVYDLNVNAV 58 (358)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CchHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 489999999999999999999999988763
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.26 E-value=0.017 Score=48.48 Aligned_cols=83 Identities=18% Similarity=0.211 Sum_probs=53.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|..+++.|.+.|++|++.+|++++...... .++... .++.++++ ++|+||-+...
T Consensus 38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g~~~~-------~~~~e~~~--~aDvVi~~vp~ 97 (320)
T 4dll_A 38 GTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-----------LGATIH-------EQARAAAR--DADIVVSMLEN 97 (320)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TTCEEE-------SSHHHHHT--TCSEEEECCSS
T ss_pred CccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------CCCEee-------CCHHHHHh--cCCEEEEECCC
Confidence 57999999999999999999999999876322111 133221 23456677 89999988753
Q ss_pred ChhcHHHH------HHhCCCCCcEEEeecc
Q 022578 83 EADEVEPI------LDALPNLEQFIYCSSA 106 (295)
Q Consensus 83 ~~~~~~~l------l~~~~~~~~~i~~Ss~ 106 (295)
....+.+ ++.+...+.+|..||.
T Consensus 98 -~~~~~~v~~~~~~~~~l~~~~~vi~~st~ 126 (320)
T 4dll_A 98 -GAVVQDVLFAQGVAAAMKPGSLFLDMASI 126 (320)
T ss_dssp -HHHHHHHHTTTCHHHHCCTTCEEEECSCC
T ss_pred -HHHHHHHHcchhHHhhCCCCCEEEecCCC
Confidence 2233333 3344444456666654
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.033 Score=45.82 Aligned_cols=83 Identities=16% Similarity=0.223 Sum_probs=52.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|..+++.|.+.|++|++.+|++++.... .+ .++.. .+++.++++ ++|+||-+...
T Consensus 8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~---------~~--~g~~~-------~~~~~~~~~--~aDvvi~~vp~ 67 (287)
T 3pef_A 8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEEL---------AA--LGAER-------AATPCEVVE--SCPVTFAMLAD 67 (287)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH---------HH--TTCEE-------CSSHHHHHH--HCSEEEECCSS
T ss_pred eecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH---------HH--CCCee-------cCCHHHHHh--cCCEEEEEcCC
Confidence 479999999999999999999999988773211 11 12221 123445666 78998887653
Q ss_pred ChhcHHHHH-------HhCCCCCcEEEeecc
Q 022578 83 EADEVEPIL-------DALPNLEQFIYCSSA 106 (295)
Q Consensus 83 ~~~~~~~ll-------~~~~~~~~~i~~Ss~ 106 (295)
....+.++ ..++..+.+|..||.
T Consensus 68 -~~~~~~v~~~~~~l~~~l~~~~~vi~~st~ 97 (287)
T 3pef_A 68 -PAAAEEVCFGKHGVLEGIGEGRGYVDMSTV 97 (287)
T ss_dssp -HHHHHHHHHSTTCHHHHCCTTCEEEECSCC
T ss_pred -HHHHHHHHcCcchHhhcCCCCCEEEeCCCC
Confidence 22333333 444443455555543
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=95.21 E-value=0.027 Score=49.77 Aligned_cols=92 Identities=12% Similarity=0.191 Sum_probs=59.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-------------h------
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-------------Y------ 61 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-------------~------ 61 (295)
+||+|-+|...++.+...|.+|+++++++.+... ..+. +.+.+ .|..+ +
T Consensus 235 ~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~---------~~~l--Ga~~v-i~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 235 WGASGGLGSYATQFALAGGANPICVVSSPQKAEI---------CRAM--GAEAI-IDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHH--TCCEE-EETTTTTCCSEEETTEECHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHH---------HHhh--CCcEE-EecCcCcccccccccccchHHHHHH
Confidence 5889999999999999999999999986655211 1111 22222 12221 1
Q ss_pred -HHHHHhhhcCCCcEEEEcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 62 -DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 62 -~~~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
+.+.++....++|+||+++|. ......++.++...+++.+++.
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~~ 346 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGGTITTCAST 346 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEEEEEESCCT
T ss_pred HHHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCcEEEEEecC
Confidence 344444443589999999985 4566677777744578876643
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.058 Score=45.64 Aligned_cols=84 Identities=15% Similarity=0.107 Sum_probs=59.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|.+..... ..+++++ ++++++++ ++|+|+.+...
T Consensus 180 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-------------~~g~~~~-------~~l~ell~--~sDvV~l~~Pl 237 (345)
T 4g2n_A 180 GMGRIGRAIATRARGFGLAIHYHNRTRLSHAL-------------EEGAIYH-------DTLDSLLG--ASDIFLIAAPG 237 (345)
T ss_dssp SCSHHHHHHHHHHHTTTCEEEEECSSCCCHHH-------------HTTCEEC-------SSHHHHHH--TCSEEEECSCC
T ss_pred EeChhHHHHHHHHHHCCCEEEEECCCCcchhh-------------hcCCeEe-------CCHHHHHh--hCCEEEEecCC
Confidence 57999999999999999999999988644110 0122221 35677888 99999988765
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....+|.+|...+
T Consensus 238 t~~T~~li~~~~l~~mk~gailIN~aRG~~ 267 (345)
T 4g2n_A 238 RPELKGFLDHDRIAKIPEGAVVINISRGDL 267 (345)
T ss_dssp CGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred CHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence 432 13456677776668888887665
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.016 Score=48.37 Aligned_cols=68 Identities=15% Similarity=0.167 Sum_probs=45.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|..+++.|.+.|++|++.+|++++.... .+ .++.. ..++.++++ ++|+||-+...
T Consensus 28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l---------~~--~g~~~-------~~~~~~~~~--~aDvvi~~vp~ 87 (310)
T 3doj_A 28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDEL---------VE--HGASV-------CESPAEVIK--KCKYTIAMLSD 87 (310)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH---------HH--TTCEE-------CSSHHHHHH--HCSEEEECCSS
T ss_pred CccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH---------HH--CCCeE-------cCCHHHHHH--hCCEEEEEcCC
Confidence 579999999999999999999999998763211 11 12221 123445666 78888887653
Q ss_pred ChhcHHHHH
Q 022578 83 EADEVEPIL 91 (295)
Q Consensus 83 ~~~~~~~ll 91 (295)
...++.++
T Consensus 88 -~~~~~~v~ 95 (310)
T 3doj_A 88 -PCAALSVV 95 (310)
T ss_dssp -HHHHHHHH
T ss_pred -HHHHHHHH
Confidence 22344444
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.02 Score=48.55 Aligned_cols=90 Identities=17% Similarity=0.329 Sum_probs=57.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-hHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~ 79 (295)
+||+|.+|..+++.+...|.+|+++ +++++.. ...+ .+.+.+. +-.+ .+.+.+.....++|+||++
T Consensus 157 ~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~---------~~~~--lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~ 223 (343)
T 3gaz_A 157 QGGGGGVGHVAIQIALARGARVFAT-ARGSDLE---------YVRD--LGATPID-ASREPEDYAAEHTAGQGFDLVYDT 223 (343)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH---------HHHH--HTSEEEE-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH---------HHHH--cCCCEec-cCCCHHHHHHHHhcCCCceEEEEC
Confidence 4889999999999999999999998 6554421 1111 1344432 2222 2334444443589999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+|. ......++.++...++|.++.
T Consensus 224 ~g~--~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 224 LGG--PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp SCT--HHHHHHHHHEEEEEEEEESCC
T ss_pred CCc--HHHHHHHHHHhcCCeEEEEcc
Confidence 984 456667777774457776654
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.10 E-value=0.06 Score=44.73 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=25.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~ 30 (295)
+||..|.+++++++++|++|+.+.+..+
T Consensus 63 SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 63 SSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 3599999999999999999999998754
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.0064 Score=53.81 Aligned_cols=68 Identities=15% Similarity=0.273 Sum_probs=53.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|.|-+|+++++.|.++||+|++++++++..... .. .-++..+.||.++++.++++=- .++|.+|-+.+
T Consensus 10 G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~---------~~-~~~~~~i~Gd~~~~~~L~~Agi-~~ad~~ia~t~ 77 (461)
T 4g65_A 10 GAGQVGGTLAENLVGENNDITIVDKDGDRLREL---------QD-KYDLRVVNGHASHPDVLHEAGA-QDADMLVAVTN 77 (461)
T ss_dssp CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHH---------HH-HSSCEEEESCTTCHHHHHHHTT-TTCSEEEECCS
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH---------HH-hcCcEEEEEcCCCHHHHHhcCC-CcCCEEEEEcC
Confidence 679999999999999999999999998763211 11 1368899999999999987732 28999986544
|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=95.08 E-value=0.064 Score=44.56 Aligned_cols=80 Identities=18% Similarity=0.120 Sum_probs=55.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|++.. . +. ....++.++++ .+|+|+.+...
T Consensus 131 G~G~IG~~~A~~l~~~G~~V~~~dr~~~~-~----------------~~-------~~~~~l~ell~--~aDvV~l~~P~ 184 (303)
T 1qp8_A 131 GLGEIGTRVGKILAALGAQVRGFSRTPKE-G----------------PW-------RFTNSLEEALR--EARAAVCALPL 184 (303)
T ss_dssp SCSTHHHHHHHHHHHTTCEEEEECSSCCC-S----------------SS-------CCBSCSHHHHT--TCSEEEECCCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCccc-c----------------Cc-------ccCCCHHHHHh--hCCEEEEeCcC
Confidence 57999999999999999999999987652 1 00 11123456787 89999988755
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. -....+..++...-+|.+|+..+
T Consensus 185 ~~~t~~~i~~~~l~~mk~gailin~srg~~ 214 (303)
T 1qp8_A 185 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV 214 (303)
T ss_dssp STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred chHHHHHhCHHHHhhCCCCCEEEECCCCcc
Confidence 321 12345666775668888887554
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.056 Score=45.12 Aligned_cols=79 Identities=16% Similarity=0.131 Sum_probs=55.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|++... . .+ ..++.++++ ++|+|+.+...
T Consensus 151 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-----------------~-----~~---~~~l~ell~--~aDvV~l~~p~ 203 (311)
T 2cuk_A 151 GMGRIGQAVAKRALAFGMRVVYHARTPKPL-----------------P-----YP---FLSLEELLK--EADVVSLHTPL 203 (311)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCSS-----------------S-----SC---BCCHHHHHH--HCSEEEECCCC
T ss_pred EECHHHHHHHHHHHHCCCEEEEECCCCccc-----------------c-----cc---cCCHHHHHh--hCCEEEEeCCC
Confidence 579999999999999999999999887651 1 12 224566787 89999988655
Q ss_pred Chh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. . ....+..++....+|.+|+..+
T Consensus 204 ~~~t~~li~~~~l~~mk~ga~lin~srg~~ 233 (311)
T 2cuk_A 204 TPETHRLLNRERLFAMKRGAILLNTARGAL 233 (311)
T ss_dssp CTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred ChHHHhhcCHHHHhhCCCCcEEEECCCCCc
Confidence 321 1 1245556665567888887554
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.0054 Score=54.09 Aligned_cols=29 Identities=14% Similarity=0.351 Sum_probs=27.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|++|..++..|.+.|++|++++|++++
T Consensus 9 G~G~vG~~lA~~La~~G~~V~~~D~~~~~ 37 (450)
T 3gg2_A 9 GIGYVGLVSATCFAELGANVRCIDTDRNK 37 (450)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CcCHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence 57999999999999999999999999866
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.017 Score=45.42 Aligned_cols=59 Identities=24% Similarity=0.256 Sum_probs=42.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|+|.+|+.+++.|.+.|++|++.+|+++....... .++... ++.++++ ++|+||.+...
T Consensus 35 G~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g~~~~--------~~~~~~~--~~DvVi~av~~ 93 (215)
T 2vns_A 35 GSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP-----------SAAQVT--------FQEEAVS--SPEVIFVAVFR 93 (215)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB-----------TTSEEE--------EHHHHTT--SCSEEEECSCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cCCcee--------cHHHHHh--CCCEEEECCCh
Confidence 38999999999999999999999998765321110 234332 2445677 89999998764
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=94.97 E-value=0.01 Score=50.39 Aligned_cols=92 Identities=13% Similarity=0.150 Sum_probs=57.0
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHH---HHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---~~~~~~~~~~d~v 76 (295)
+|++|-+|..+++.+... |.+|+++++++++... ..+. +.+.+ .|..+.+. +.+.....++|+|
T Consensus 177 ~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~---------~~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA---------AKRA--GADYV-INASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH---------HHHH--TCSEE-EETTTSCHHHHHHHHTTTSCEEEE
T ss_pred ECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHH---------HHHh--CCCEE-ecCCCccHHHHHHHHhcCCCceEE
Confidence 588889999999999999 9999999988765211 1111 22222 34544333 3433321279999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|+++|. .......++.++...+++.++.
T Consensus 245 i~~~g~-~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 245 IDLNNS-EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EESCCC-HHHHTTGGGGEEEEEEEEECCS
T ss_pred EECCCC-HHHHHHHHHHHhcCCEEEEECC
Confidence 999984 2233444455553347777664
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=94.95 E-value=0.23 Score=39.99 Aligned_cols=105 Identities=18% Similarity=0.149 Sum_probs=61.6
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCC-------CCC----CchhhhhccCCeEEEEecC-CChHHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQL-------PGE----SDQEFAEFSSKILHLKGDR-KDYDFVKS 66 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~-------~~~----~~~~~~~~~~~v~~~~~D~-~~~~~~~~ 66 (295)
|.|-+|+.+++.|...|. ++++++++.-.. ..++ .+. ....+.+..+.+++...+. .+.+.+.+
T Consensus 35 G~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~ 114 (251)
T 1zud_1 35 GLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKD 114 (251)
T ss_dssp CCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccCCHHHHHH
Confidence 457799999999999996 788887765331 1111 000 0111223334555443322 24566778
Q ss_pred hhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccccc
Q 022578 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
.++ ++|+||++.. +...-..+.++|. ....+|+.+..+.+|
T Consensus 115 ~~~--~~DvVi~~~d-~~~~r~~l~~~~~~~~~p~i~~~~~g~~G 156 (251)
T 1zud_1 115 AVA--RADVVLDCTD-NMATRQEINAACVALNTPLITASAVGFGG 156 (251)
T ss_dssp HHH--HCSEEEECCS-SHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred HHh--cCCEEEECCC-CHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence 888 8999999875 4443334444455 445678776554433
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=94.93 E-value=0.055 Score=45.38 Aligned_cols=83 Identities=14% Similarity=0.106 Sum_probs=56.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|++.... .+.-. ....+++++++ ++|+|+.+...
T Consensus 147 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~~~----~~~~~l~ell~--~aDvV~l~lPl 204 (324)
T 3hg7_A 147 GTGSIGQHIAHTGKHFGMKVLGVSRSGRERA----------------GFDQV----YQLPALNKMLA--QADVIVSVLPA 204 (324)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCCCT----------------TCSEE----ECGGGHHHHHH--TCSEEEECCCC
T ss_pred EECHHHHHHHHHHHhCCCEEEEEcCChHHhh----------------hhhcc----cccCCHHHHHh--hCCEEEEeCCC
Confidence 5799999999999999999999998874421 11111 12456788898 99999988764
Q ss_pred ChhcHHHH-----HHhCCCCCcEEEeecccc
Q 022578 83 EADEVEPI-----LDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~~~~l-----l~~~~~~~~~i~~Ss~~v 108 (295)
+. .++.+ +..++...-+|.+|...+
T Consensus 205 t~-~T~~li~~~~l~~mk~gailIN~aRG~~ 234 (324)
T 3hg7_A 205 TR-ETHHLFTASRFEHCKPGAILFNVGRGNA 234 (324)
T ss_dssp CS-SSTTSBCTTTTTCSCTTCEEEECSCGGG
T ss_pred CH-HHHHHhHHHHHhcCCCCcEEEECCCchh
Confidence 32 22332 333445557888887665
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=94.92 E-value=0.018 Score=48.95 Aligned_cols=91 Identities=14% Similarity=0.088 Sum_probs=58.8
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH---HHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~v 76 (295)
+|+ |.+|..+++.+...|. +|+++++++++... ..+ .+.+.+ .|..+.+ .+.++....++|+|
T Consensus 174 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~---------~~~--~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 174 TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL---------AKK--VGADYV-INPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH---------HHH--HTCSEE-ECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH---------HHH--hCCCEE-ECCCCcCHHHHHHHHcCCCCCCEE
Confidence 478 9999999999999999 99999988665211 111 122222 2444332 33333332379999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|++++. .......++.++...+++.+++
T Consensus 241 id~~g~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 241 LEFSGA-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC-HHHHHHHHHHHhcCCEEEEEcc
Confidence 999884 3455667777774458888765
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=94.92 E-value=0.016 Score=47.67 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=47.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+|++|.+|..+++.|.+.|++|++.+|+++.... +.+ .++. ..+ ..++++ ++|+||.+.
T Consensus 17 IG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~---------~~~--~g~~-----~~~---~~~~~~--~aDvVi~av 75 (286)
T 3c24_A 17 LGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDR---------LQG--MGIP-----LTD---GDGWID--EADVVVLAL 75 (286)
T ss_dssp ETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHH---------HHH--TTCC-----CCC---SSGGGG--TCSEEEECS
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHh--cCCC-----cCC---HHHHhc--CCCEEEEcC
Confidence 3667999999999999999999999988665221 111 1221 112 234566 899999987
Q ss_pred cCChhcHHHHHHhC
Q 022578 81 GREADEVEPILDAL 94 (295)
Q Consensus 81 ~~~~~~~~~ll~~~ 94 (295)
... ....+++.+
T Consensus 76 ~~~--~~~~v~~~l 87 (286)
T 3c24_A 76 PDN--IIEKVAEDI 87 (286)
T ss_dssp CHH--HHHHHHHHH
T ss_pred Cch--HHHHHHHHH
Confidence 643 355555544
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=94.91 E-value=0.095 Score=44.29 Aligned_cols=82 Identities=16% Similarity=0.150 Sum_probs=59.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|.+.... . ..+.+. +++++++ ++|+|+.+...
T Consensus 155 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~-----------~~~~~~--------~l~ell~--~aDvV~l~~Pl 210 (343)
T 2yq5_A 155 GVGHIGSAVAEIFSAMGAKVIAYDVAYNPEF---E-----------PFLTYT--------DFDTVLK--EADIVSLHTPL 210 (343)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCGGG---T-----------TTCEEC--------CHHHHHH--HCSEEEECCCC
T ss_pred ecCHHHHHHHHHHhhCCCEEEEECCChhhhh---h-----------cccccc--------CHHHHHh--cCCEEEEcCCC
Confidence 5799999999999999999999999876511 0 122221 4667888 89999988765
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++...-+|.+|...+
T Consensus 211 t~~t~~li~~~~l~~mk~gailIN~aRg~~ 240 (343)
T 2yq5_A 211 FPSTENMIGEKQLKEMKKSAYLINCARGEL 240 (343)
T ss_dssp CTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred CHHHHHHhhHHHHhhCCCCcEEEECCCChh
Confidence 322 13456777886668999887665
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.033 Score=45.87 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=45.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|..+++.|.+.|++|++.+|++++.... .+ .++.. ..+..++++ ++|+||-+...
T Consensus 8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~---------~~--~g~~~-------~~~~~~~~~--~advvi~~v~~ 67 (287)
T 3pdu_A 8 GLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPL---------VA--LGARQ-------ASSPAEVCA--ACDITIAMLAD 67 (287)
T ss_dssp CCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHH---------HH--HTCEE-------CSCHHHHHH--HCSEEEECCSS
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH---------HH--CCCee-------cCCHHHHHH--cCCEEEEEcCC
Confidence 589999999999999999999999998763211 11 12221 123445666 78999888754
Q ss_pred ChhcHHHHH
Q 022578 83 EADEVEPIL 91 (295)
Q Consensus 83 ~~~~~~~ll 91 (295)
. ..++.++
T Consensus 68 ~-~~~~~v~ 75 (287)
T 3pdu_A 68 P-AAAREVC 75 (287)
T ss_dssp H-HHHHHHH
T ss_pred H-HHHHHHH
Confidence 2 2344444
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=94.72 E-value=0.04 Score=46.63 Aligned_cols=87 Identities=18% Similarity=0.139 Sum_probs=48.9
Q ss_pred CCcCCcchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.||+|++|+.+++.|+++++ ++.++...... .... . ..+.++...|. +++ .++ ++|+||
T Consensus 12 iGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~-g~~~---------~-~~g~~i~~~~~-~~~----~~~--~~DvV~ 73 (340)
T 2hjs_A 12 VGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRM---------G-FAESSLRVGDV-DSF----DFS--SVGLAF 73 (340)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEE---------E-ETTEEEECEEG-GGC----CGG--GCSEEE
T ss_pred ECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCcc---------c-cCCcceEEecC-CHH----Hhc--CCCEEE
Confidence 48999999999999997654 55655422111 0000 0 01222222222 222 245 899999
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALP-NLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~ 107 (295)
.+.+.. ....++..+. ...++|.+|+..
T Consensus 74 ~a~g~~--~s~~~a~~~~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 74 FAAAAE--VSRAHAERARAAGCSVIDLSGAL 102 (340)
T ss_dssp ECSCHH--HHHHHHHHHHHTTCEEEETTCTT
T ss_pred EcCCcH--HHHHHHHHHHHCCCEEEEeCCCC
Confidence 998743 3455555544 333678778654
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.71 E-value=0.17 Score=42.93 Aligned_cols=91 Identities=10% Similarity=-0.019 Sum_probs=58.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC----hHHHHHhhh---cCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLS---AKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~~~~~~~---~~~~ 73 (295)
+|+ |-+|...++.+...|.+|+++++++++... ..+ .+.+.+ .|..+ .+.+.+... ..++
T Consensus 175 ~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~--lGa~~~-~~~~~~~~~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 175 IGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV---------AKN--CGADVT-LVVDPAKEEESSIIERIRSAIGDLP 241 (352)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHH--TTCSEE-EECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred ECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH---------HHH--hCCCEE-EcCcccccHHHHHHHHhccccCCCC
Confidence 365 899999999888899999999887765211 111 122221 23332 344544443 2479
Q ss_pred cEEEEcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 74 DVVYDINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 74 d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|+||++++. .......++.++...++|.++.
T Consensus 242 D~vid~~g~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 242 NVTIDCSGN-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SEEEECSCC-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CEEEECCCC-HHHHHHHHHHHhcCCEEEEEec
Confidence 999999874 2345667788885568887753
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=94.67 E-value=0.033 Score=47.57 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=60.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeE-EEEecCCC-hHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~-~~~~~~~~~~~~~d~vi~ 78 (295)
+| +|.+|...++.+...|.+|+++++++++... ..+. +.+ ++..+-.+ .+.+.+.....++|+||+
T Consensus 196 ~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~vi~~~~~~~~~~v~~~~~g~g~D~vid 263 (363)
T 3uog_A 196 QG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR---------AFAL--GADHGINRLEEDWVERVYALTGDRGADHILE 263 (363)
T ss_dssp ES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHH--TCSEEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred EC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH---------HHHc--CCCEEEcCCcccHHHHHHHHhCCCCceEEEE
Confidence 36 8999999999998899999999988766221 1111 222 23211112 234444544458999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
++| .......++.++...+++.++..
T Consensus 264 ~~g--~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 264 IAG--GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp ETT--SSCHHHHHHHEEEEEEEEEECCC
T ss_pred CCC--hHHHHHHHHHhhcCCEEEEEecC
Confidence 998 34667778888844588877643
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=94.66 E-value=0.0061 Score=44.63 Aligned_cols=82 Identities=16% Similarity=0.076 Sum_probs=50.3
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccCC
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~ 83 (295)
+|.+|+.+++.|.+.|++|++.+|++++... +.+.. +.... .. +++.+.++ ++|+||.+.+..
T Consensus 29 ~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~---------~a~~~-~~~~~--~~---~~~~~~~~--~~Divi~at~~~ 91 (144)
T 3oj0_A 29 NGMLASEIAPYFSYPQYKVTVAGRNIDHVRA---------FAEKY-EYEYV--LI---NDIDSLIK--NNDVIITATSSK 91 (144)
T ss_dssp CSHHHHHHGGGCCTTTCEEEEEESCHHHHHH---------HHHHH-TCEEE--EC---SCHHHHHH--TCSEEEECSCCS
T ss_pred CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHH---------HHHHh-CCceE--ee---cCHHHHhc--CCCEEEEeCCCC
Confidence 6999999999999999999999998776321 11111 22222 12 23456677 899999998754
Q ss_pred hhcHHHHHHhCCCCCcEEEee
Q 022578 84 ADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 84 ~~~~~~ll~~~~~~~~~i~~S 104 (295)
.... -.+.++....++.++
T Consensus 92 ~~~~--~~~~l~~g~~vid~~ 110 (144)
T 3oj0_A 92 TPIV--EERSLMPGKLFIDLG 110 (144)
T ss_dssp SCSB--CGGGCCTTCEEEECC
T ss_pred CcEe--eHHHcCCCCEEEEcc
Confidence 2110 013344444566554
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=94.61 E-value=0.15 Score=43.32 Aligned_cols=94 Identities=11% Similarity=0.072 Sum_probs=60.0
Q ss_pred CCcCCcchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhh----hcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~----~~~~~d~ 75 (295)
+|+ |.+|...++.+...|.+ |+++++++++... ..+....+.....|-.+.+.+.+.+ ...++|+
T Consensus 186 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv 255 (363)
T 3m6i_A 186 CGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKF---------AKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV 255 (363)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHH---------HHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH---------HHHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence 366 99999999988889987 9988887766211 1122223333333333344443333 3347999
Q ss_pred EEEcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 76 VYDINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
||+++|. .......++.++...+++.++.
T Consensus 256 vid~~g~-~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 256 ALECTGV-ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EEECSCC-HHHHHHHHHHSCTTCEEEECCC
T ss_pred EEECCCC-hHHHHHHHHHhcCCCEEEEEcc
Confidence 9999884 3355677788885568887764
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=94.55 E-value=0.023 Score=50.30 Aligned_cols=28 Identities=21% Similarity=0.388 Sum_probs=26.9
Q ss_pred cCCcchHHHHHHHHHC-CC-eEEEEecCCC
Q 022578 3 GTRFIGVFLSRLLVKE-GH-QVTLFTRGKA 30 (295)
Q Consensus 3 atG~iG~~l~~~L~~~-g~-~V~~~~r~~~ 30 (295)
|+|++|..++..|++. |+ +|++++|+++
T Consensus 25 GlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 25 GMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5899999999999999 99 9999999998
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=94.49 E-value=0.078 Score=45.50 Aligned_cols=61 Identities=13% Similarity=0.126 Sum_probs=48.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+|.+|+.+++.+.+.|++|++++..+....... --+.+..|+.|.+.+.++.+ .+|+|..
T Consensus 19 G~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvi~~ 79 (377)
T 3orq_A 19 GGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------------AHEFIQAKYDDEKALNQLGQ--KCDVITY 79 (377)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--HCSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------------CCEEEECCCCCHHHHHHHHH--hCCccee
Confidence 4688999999999999999999988766522221 12467789999999999998 7998865
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.034 Score=46.96 Aligned_cols=89 Identities=10% Similarity=0.045 Sum_probs=58.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+|+ |.+|..+++.+...|.+|++++|++.+... ..+ .+.+.+ .|..+. +.+.+... ++|+||
T Consensus 171 ~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~--lGa~~~-~d~~~~~~~~~~~~~~~--~~d~vi 235 (339)
T 1rjw_A 171 YGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL---------AKE--LGADLV-VNPLKEDAAKFMKEKVG--GVHAAV 235 (339)
T ss_dssp ECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH---------HHH--TTCSEE-ECTTTSCHHHHHHHHHS--SEEEEE
T ss_pred ECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHH--CCCCEE-ecCCCccHHHHHHHHhC--CCCEEE
Confidence 477 669999999999999999999988766321 111 123322 355543 23333333 899999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+++|. .......++.++...+++.++.
T Consensus 236 d~~g~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 236 VTAVS-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp ESSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred ECCCC-HHHHHHHHHHhhcCCEEEEecc
Confidence 99874 3456667777774448887764
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=94.46 E-value=0.012 Score=48.13 Aligned_cols=28 Identities=18% Similarity=0.099 Sum_probs=22.3
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecC
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG 28 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~ 28 (295)
+|++|.+|+.+++.+.+. ++++.++.+.
T Consensus 11 ~Ga~G~mG~~~~~~~~~~~~~elva~~d~ 39 (273)
T 1dih_A 11 AGAGGRMGRQLIQAALALEGVQLGAALER 39 (273)
T ss_dssp TTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 588999999999998864 7888855443
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=94.44 E-value=0.042 Score=46.84 Aligned_cols=93 Identities=20% Similarity=0.278 Sum_probs=52.8
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
.||+|++|+.+++.|.+++ .++.++.+..+. ...+. .....+ .+.. ..|+.-.+ .+.++ ++|+||.+
T Consensus 22 iGAtG~iG~~llr~L~~~p~~elvai~~~~~~-g~~~~----~~~~~~-~~~v--~~dl~~~~--~~~~~--~vDvVf~a 89 (359)
T 1xyg_A 22 LGASGYTGAEIVRLLANHPHFQVTLMTADRKA-GQSME----SVFPHL-RAQK--LPTLVSVK--DADFS--TVDAVFCC 89 (359)
T ss_dssp ECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTT-TSCHH----HHCGGG-TTSC--CCCCBCGG--GCCGG--GCSEEEEC
T ss_pred ECcCCHHHHHHHHHHHcCCCcEEEEEeCchhc-CCCHH----HhCchh-cCcc--cccceecc--hhHhc--CCCEEEEc
Confidence 4899999999999999875 488887764322 11110 000000 1110 12332222 34455 89999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
++.. .+...+..++...++|-+|+..
T Consensus 90 tp~~--~s~~~a~~~~aG~~VId~sa~~ 115 (359)
T 1xyg_A 90 LPHG--TTQEIIKELPTALKIVDLSADF 115 (359)
T ss_dssp CCTT--THHHHHHTSCTTCEEEECSSTT
T ss_pred CCch--hHHHHHHHHhCCCEEEECCccc
Confidence 8653 3344444446234788888754
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=94.44 E-value=0.026 Score=47.83 Aligned_cols=90 Identities=10% Similarity=0.071 Sum_probs=56.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~ 78 (295)
+||+|.+|...++.+...|.+|+++++++++... ..+. +.+.+ .|..+ .+.+.+. ...++|+||+
T Consensus 157 ~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~v-i~~~~~~~~~~~~~-~~~g~Dvv~d 223 (346)
T 3fbg_A 157 INGAGGVGSIATQIAKAYGLRVITTASRNETIEW---------TKKM--GADIV-LNHKESLLNQFKTQ-GIELVDYVFC 223 (346)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHH---------HHHH--TCSEE-ECTTSCHHHHHHHH-TCCCEEEEEE
T ss_pred EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhc--CCcEE-EECCccHHHHHHHh-CCCCccEEEE
Confidence 4899999999999999999999999987665211 1111 22222 12222 2333333 3347999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEee
Q 022578 79 INGREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
+++. .......+++++...++|.++
T Consensus 224 ~~g~-~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 224 TFNT-DMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp SSCH-HHHHHHHHHHEEEEEEEEESS
T ss_pred CCCc-hHHHHHHHHHhccCCEEEEEC
Confidence 9874 233456677777445777554
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=94.43 E-value=0.014 Score=47.68 Aligned_cols=30 Identities=17% Similarity=0.022 Sum_probs=26.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
+|+ |.+|+.++..|++.|.+|++..|+.++
T Consensus 125 iGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~ 154 (271)
T 1nyt_A 125 IGA-GGASRGVLLPLLSLDCAVTITNRTVSR 154 (271)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred ECC-cHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence 476 679999999999999999999998765
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.055 Score=44.74 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=57.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.+++.|...|.+|++.+|++.+... ..+ .+++.+ +.+++.++++ ++|+|+.+...
T Consensus 162 G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~---------~~~--~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~ 223 (293)
T 3d4o_A 162 GLGRVGMSVARKFAALGAKVKVGARESDLLAR---------IAE--MGMEPF-----HISKAAQELR--DVDVCINTIPA 223 (293)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHH--TTSEEE-----EGGGHHHHTT--TCSEEEECCSS
T ss_pred eeCHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHH--CCCeec-----ChhhHHHHhc--CCCEEEECCCh
Confidence 47999999999999999999999998755210 011 234332 1245677788 99999999865
Q ss_pred ChhcHHHHHHhCCCCCcEEEeec
Q 022578 83 EADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
... ....++.++....+|.++.
T Consensus 224 ~~i-~~~~l~~mk~~~~lin~ar 245 (293)
T 3d4o_A 224 LVV-TANVLAEMPSHTFVIDLAS 245 (293)
T ss_dssp CCB-CHHHHHHSCTTCEEEECSS
T ss_pred HHh-CHHHHHhcCCCCEEEEecC
Confidence 332 2346677775557777764
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.39 E-value=0.034 Score=47.11 Aligned_cols=91 Identities=11% Similarity=0.003 Sum_probs=51.0
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
.||+|++|+.+++.|.+++ .++.++.+..+. ...+... ...+ .+.. ...+.+.+ . +. ++|+||.+
T Consensus 10 iGAtG~iG~~llr~L~~~p~~elv~v~s~~~~-g~~~~~~----~~~~-~g~~--~~~~~~~~---~-~~--~vDvV~~a 75 (345)
T 2ozp_A 10 VGASGYAGGEFLRLALSHPYLEVKQVTSRRFA-GEPVHFV----HPNL-RGRT--NLKFVPPE---K-LE--PADILVLA 75 (345)
T ss_dssp ETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT-TSBGGGT----CGGG-TTTC--CCBCBCGG---G-CC--CCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHcCCCcEEEEEECchhh-CchhHHh----Cchh-cCcc--cccccchh---H-hc--CCCEEEEc
Confidence 4899999999999999875 488887764332 1111100 0000 1100 01122322 2 45 89999999
Q ss_pred ccCChhcHHHHHHh-CCCCCcEEEeeccc
Q 022578 80 NGREADEVEPILDA-LPNLEQFIYCSSAG 107 (295)
Q Consensus 80 a~~~~~~~~~ll~~-~~~~~~~i~~Ss~~ 107 (295)
++.. ....++.. ++...++|-+|+..
T Consensus 76 ~g~~--~s~~~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 76 LPHG--VFAREFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp CCTT--HHHHTHHHHHTTCSEEEECSSTT
T ss_pred CCcH--HHHHHHHHHHHCCCEEEEcCccc
Confidence 8754 23444433 34334788888754
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=94.37 E-value=0.026 Score=47.33 Aligned_cols=91 Identities=16% Similarity=0.174 Sum_probs=58.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||+|.+|...++.+...|.+|+++++++++... ..+. +.+.+. |..+.+.+ +.+...++|+||+++
T Consensus 153 ~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~vi-~~~~~~~~-~~~~~~~~d~v~d~~ 219 (324)
T 3nx4_A 153 TGASGGVGSTAVALLHKLGYQVAAVSGRESTHGY---------LKSL--GANRIL-SRDEFAES-RPLEKQLWAGAIDTV 219 (324)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH---------HHHH--TCSEEE-EGGGSSCC-CSSCCCCEEEEEESS
T ss_pred ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhc--CCCEEE-ecCCHHHH-HhhcCCCccEEEECC
Confidence 5889999999999999999999999988766321 1111 222221 23222222 222234799999998
Q ss_pred cCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 81 GREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
|.. .....+++++...+++.++..
T Consensus 220 g~~--~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 220 GDK--VLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp CHH--HHHHHHHTEEEEEEEEECCCT
T ss_pred CcH--HHHHHHHHHhcCCEEEEEecC
Confidence 742 556666666644588877643
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.061 Score=45.39 Aligned_cols=81 Identities=17% Similarity=0.075 Sum_probs=53.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|.+... .+... ..++.++++ ++|+|+.+...
T Consensus 178 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~-------~~sl~ell~--~aDvVil~vP~ 232 (340)
T 4dgs_A 178 GLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VDWIA-------HQSPVDLAR--DSDVLAVCVAA 232 (340)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SCCEE-------CSSHHHHHH--TCSEEEECC--
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cCcee-------cCCHHHHHh--cCCEEEEeCCC
Confidence 579999999999999999999999887651 11211 134667888 99999988654
Q ss_pred Chh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ . ....+..++....+|.+|...+
T Consensus 233 t~~t~~li~~~~l~~mk~gailIN~aRG~v 262 (340)
T 4dgs_A 233 SAATQNIVDASLLQALGPEGIVVNVARGNV 262 (340)
T ss_dssp --------CHHHHHHTTTTCEEEECSCC--
T ss_pred CHHHHHHhhHHHHhcCCCCCEEEECCCCcc
Confidence 321 1 2345566775568888887655
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.06 Score=46.69 Aligned_cols=92 Identities=16% Similarity=0.125 Sum_probs=57.6
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~v 76 (295)
+|+ |.+|...++.+...|. +|+++++++.+... ..++ +.+.+ .|..+. +.+.++....++|+|
T Consensus 220 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------~~~l--Ga~~v-i~~~~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 220 LGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL---------AKEL--GADHV-IDPTKENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp ECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH---------HHHH--TCSEE-ECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH---------HHHc--CCCEE-EcCCCCCHHHHHHHHhCCCCCCEE
Confidence 366 8999999998888998 89998887766211 1111 23322 233332 344444443479999
Q ss_pred EEcccCChhcHHHHHHhC----CCCCcEEEeec
Q 022578 77 YDINGREADEVEPILDAL----PNLEQFIYCSS 105 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~----~~~~~~i~~Ss 105 (295)
|+++|........+++++ +...+++.++.
T Consensus 287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 287 LEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp EECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred EECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 999986533444455554 65568887664
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=94.28 E-value=0.025 Score=46.51 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=26.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|.+|+.++..|++.|++|++.+|+++.
T Consensus 11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~ 39 (283)
T 4e12_A 11 GTGVLGSQIAFQTAFHGFAVTAYDINTDA 39 (283)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence 47999999999999999999999998766
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=94.25 E-value=0.094 Score=44.16 Aligned_cols=81 Identities=19% Similarity=0.174 Sum_probs=55.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|++... .++.. ..++.++++ ++|+|+.+...
T Consensus 171 G~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----------------~g~~~-------~~~l~ell~--~aDvVil~vP~ 225 (333)
T 3ba1_A 171 GLGRIGLAVAERAEAFDCPISYFSRSKKPN----------------TNYTY-------YGSVVELAS--NSDILVVACPL 225 (333)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEECSSCCTT----------------CCSEE-------ESCHHHHHH--TCSEEEECSCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCchhc----------------cCcee-------cCCHHHHHh--cCCEEEEecCC
Confidence 579999999999999999999999887651 12221 123556788 89999988765
Q ss_pred Chh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. . ....+..++....+|.+|+..+
T Consensus 226 ~~~t~~li~~~~l~~mk~gailIn~srG~~ 255 (333)
T 3ba1_A 226 TPETTHIINREVIDALGPKGVLINIGRGPH 255 (333)
T ss_dssp CGGGTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred ChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence 421 1 1345566665557777776543
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=94.23 E-value=0.045 Score=45.43 Aligned_cols=84 Identities=17% Similarity=0.234 Sum_probs=56.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.+++.|...|.+|++.+|++.+... +.+ .+++.+. .+++.++++ ++|+|+.+...
T Consensus 164 G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~---------~~~--~g~~~~~-----~~~l~~~l~--~aDvVi~~~p~ 225 (300)
T 2rir_A 164 GLGRTGMTIARTFAALGANVKVGARSSAHLAR---------ITE--MGLVPFH-----TDELKEHVK--DIDICINTIPS 225 (300)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHH--TTCEEEE-----GGGHHHHST--TCSEEEECCSS
T ss_pred cccHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHH--CCCeEEc-----hhhHHHHhh--CCCEEEECCCh
Confidence 46999999999999999999999998755211 011 1333322 245677888 99999999876
Q ss_pred ChhcHHHHHHhCCCCCcEEEeec
Q 022578 83 EADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
.... ...+..++....+|.++.
T Consensus 226 ~~i~-~~~~~~mk~g~~lin~a~ 247 (300)
T 2rir_A 226 MILN-QTVLSSMTPKTLILDLAS 247 (300)
T ss_dssp CCBC-HHHHTTSCTTCEEEECSS
T ss_pred hhhC-HHHHHhCCCCCEEEEEeC
Confidence 4322 345566665557777664
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.22 E-value=0.06 Score=44.97 Aligned_cols=84 Identities=14% Similarity=0.022 Sum_probs=58.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|+++.... . ..++.. . ++.++++ ++|+|+.+...
T Consensus 149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~----------~--~~g~~~--~------~l~ell~--~aDvVvl~~P~ 206 (313)
T 2ekl_A 149 GFGRIGTKVGIIANAMGMKVLAYDILDIREKA----------E--KINAKA--V------SLEELLK--NSDVISLHVTV 206 (313)
T ss_dssp SCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH----------H--HTTCEE--C------CHHHHHH--HCSEEEECCCC
T ss_pred eeCHHHHHHHHHHHHCCCEEEEECCCcchhHH----------H--hcCcee--c------CHHHHHh--hCCEEEEeccC
Confidence 57999999999999999999999988765210 0 123432 1 3456777 89999988765
Q ss_pred Chhc----HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EADE----VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~----~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+. ....+..++....+|.+|+..+
T Consensus 207 ~~~t~~li~~~~l~~mk~ga~lIn~arg~~ 236 (313)
T 2ekl_A 207 SKDAKPIIDYPQFELMKDNVIIVNTSRAVA 236 (313)
T ss_dssp CTTSCCSBCHHHHHHSCTTEEEEESSCGGG
T ss_pred ChHHHHhhCHHHHhcCCCCCEEEECCCCcc
Confidence 3321 2456677775567888887554
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=94.20 E-value=0.081 Score=44.04 Aligned_cols=84 Identities=17% Similarity=0.065 Sum_probs=58.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|++..... . ..+++.. ++.++++ ++|+|+.+...
T Consensus 149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~----------~--~~g~~~~--------~l~ell~--~aDvV~l~~p~ 206 (307)
T 1wwk_A 149 GFGRIGYQVAKIANALGMNILLYDPYPNEERA----------K--EVNGKFV--------DLETLLK--ESDVVTIHVPL 206 (307)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH----------H--HTTCEEC--------CHHHHHH--HCSEEEECCCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCChhhH----------h--hcCcccc--------CHHHHHh--hCCEEEEecCC
Confidence 57999999999999999999999988765110 0 1233321 2556777 89999988765
Q ss_pred Chh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ . ....+..++....+|.+|+..+
T Consensus 207 ~~~t~~li~~~~l~~mk~ga~lin~arg~~ 236 (307)
T 1wwk_A 207 VESTYHLINEERLKLMKKTAILINTSRGPV 236 (307)
T ss_dssp STTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred ChHHhhhcCHHHHhcCCCCeEEEECCCCcc
Confidence 332 1 2456677876668888887554
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=94.04 E-value=0.11 Score=40.44 Aligned_cols=53 Identities=13% Similarity=0.152 Sum_probs=40.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.++..|.+.|++|++.+|++. .++ ++|+||-+..
T Consensus 26 G~G~mG~~la~~l~~~g~~V~~~~~~~~------------------------------------~~~--~aD~vi~av~- 66 (209)
T 2raf_A 26 GKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------------------------ATT--LGEIVIMAVP- 66 (209)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECTTCC------------------------------------CSS--CCSEEEECSC-
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------------------------Hhc--cCCEEEEcCC-
Confidence 4899999999999999999999877532 344 7888888875
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
...++.+++.+.
T Consensus 67 -~~~~~~v~~~l~ 78 (209)
T 2raf_A 67 -YPALAALAKQYA 78 (209)
T ss_dssp -HHHHHHHHHHTH
T ss_pred -cHHHHHHHHHHH
Confidence 445566666553
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=94.03 E-value=0.099 Score=43.98 Aligned_cols=85 Identities=18% Similarity=0.120 Sum_probs=56.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.+++.|...|++|++.+|++...... . ..++... ++.++++ ++|+|+.+...
T Consensus 162 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~---------~--~~g~~~~--------~l~e~l~--~aDvVi~~vp~ 220 (330)
T 2gcg_A 162 GLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA---------A--EFQAEFV--------STPELAA--QSDFIVVACSL 220 (330)
T ss_dssp CCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH---------H--TTTCEEC--------CHHHHHH--HCSEEEECCCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH---------H--hcCceeC--------CHHHHHh--hCCEEEEeCCC
Confidence 469999999999999999999999887542110 0 0123221 2456677 89999988765
Q ss_pred Chh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. . ...++..++...-+|.+|+..+
T Consensus 221 ~~~t~~~i~~~~~~~mk~gailIn~srg~~ 250 (330)
T 2gcg_A 221 TPATEGLCNKDFFQKMKETAVFINISRGDV 250 (330)
T ss_dssp CTTTTTCBSHHHHHHSCTTCEEEECSCGGG
T ss_pred ChHHHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence 322 1 1456677775557777776543
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=93.99 E-value=0.042 Score=46.64 Aligned_cols=86 Identities=14% Similarity=0.090 Sum_probs=58.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|++...... .. .+++.+ ++++++++ .+|+|+.+...
T Consensus 171 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---------~~--~g~~~~-------~~l~ell~--~aDvV~l~~Pl 230 (351)
T 3jtm_A 171 GAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE---------KE--TGAKFV-------EDLNEMLP--KCDVIVINMPL 230 (351)
T ss_dssp CCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH---------HH--HCCEEC-------SCHHHHGG--GCSEEEECSCC
T ss_pred EeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH---------Hh--CCCeEc-------CCHHHHHh--cCCEEEECCCC
Confidence 579999999999999999999999886441100 00 123221 34677888 89999988764
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....+|.+|...+
T Consensus 231 t~~t~~li~~~~l~~mk~gailIN~aRG~~ 260 (351)
T 3jtm_A 231 TEKTRGMFNKELIGKLKKGVLIVNNARGAI 260 (351)
T ss_dssp CTTTTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred CHHHHHhhcHHHHhcCCCCCEEEECcCchh
Confidence 322 13566777886668888887654
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=93.93 E-value=0.12 Score=44.06 Aligned_cols=87 Identities=10% Similarity=0.079 Sum_probs=49.3
Q ss_pred CCcCCcchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.||||++|..|++.|.++++ ++..+....+. ...+. ..+.+....++. ++ .++ ++|+||
T Consensus 8 vGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa-G~~~~----------~~~~~~~~~~~~-~~----~~~--~~Dvvf 69 (366)
T 3pwk_A 8 VGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GKSLK----------FKDQDITIEETT-ET----AFE--GVDIAL 69 (366)
T ss_dssp ETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEECC-TT----TTT--TCSEEE
T ss_pred ECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC-CCcce----------ecCCCceEeeCC-HH----Hhc--CCCEEE
Confidence 49999999999998888765 34444432221 11110 012233323332 22 245 899999
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALP-NLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~ 107 (295)
.+++. ...+..+..+. ...++|-+|+..
T Consensus 70 ~a~~~--~~s~~~a~~~~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 70 FSAGS--STSAKYAPYAVKAGVVVVDNTSYF 98 (366)
T ss_dssp ECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred ECCCh--HhHHHHHHHHHHCCCEEEEcCCcc
Confidence 99863 33444444433 334788888765
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=93.92 E-value=0.0077 Score=50.98 Aligned_cols=68 Identities=12% Similarity=0.150 Sum_probs=43.0
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhc-c--CCeEEEEecCCChHHHHHhhhcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF-S--SKILHLKGDRKDYDFVKSSLSAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~--~~v~~~~~D~~~~~~~~~~~~~~~~d~ 75 (295)
+|++|++|+.++..|+..| .+|.+++....+..... ..+... . .++.+ ..+..+.++ ++|+
T Consensus 14 iGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a-----~DL~~~~~~~~~i~~-------t~d~~~al~--dADv 79 (343)
T 3fi9_A 14 VGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVA-----EEIRHCGFEGLNLTF-------TSDIKEALT--DAKY 79 (343)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHH-----HHHHHHCCTTCCCEE-------ESCHHHHHT--TEEE
T ss_pred ECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHH-----HhhhhCcCCCCceEE-------cCCHHHHhC--CCCE
Confidence 4888999999999999988 58999998765421100 001100 0 12221 123456777 9999
Q ss_pred EEEcccC
Q 022578 76 VYDINGR 82 (295)
Q Consensus 76 vi~~a~~ 82 (295)
||.++|.
T Consensus 80 VvitaG~ 86 (343)
T 3fi9_A 80 IVSSGGA 86 (343)
T ss_dssp EEECCC-
T ss_pred EEEccCC
Confidence 9999986
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=93.90 E-value=0.13 Score=43.30 Aligned_cols=82 Identities=13% Similarity=0.011 Sum_probs=57.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|++... .. ..+.+ . ++.++++ ++|+|+.+...
T Consensus 152 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~~-----~---~l~ell~--~aDvV~~~~P~ 207 (333)
T 1dxy_A 152 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DH-----------PDFDY-----V---SLEDLFK--QSDVIDLHVPG 207 (333)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CC-----------TTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCcchh---hH-----------hcccc-----C---CHHHHHh--cCCEEEEcCCC
Confidence 579999999999999999999999887652 11 11211 1 3567777 89999988765
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....+|.+|+..+
T Consensus 208 ~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 237 (333)
T 1dxy_A 208 IEQNTHIINEAAFNLMKPGAIVINTARPNL 237 (333)
T ss_dssp CGGGTTSBCHHHHHHSCTTEEEEECSCTTS
T ss_pred chhHHHHhCHHHHhhCCCCcEEEECCCCcc
Confidence 432 12456777885568888887554
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=93.87 E-value=0.11 Score=42.51 Aligned_cols=60 Identities=15% Similarity=0.126 Sum_probs=43.6
Q ss_pred CCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
+|.+|+.++..|.+.|. +|++..|++++..+.. .++..+ ..+++.+++. ++|+||++...
T Consensus 125 aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la------------~~~~~~-----~~~~~~~~~~--~aDiVInaTp~ 185 (277)
T 3don_A 125 AGGASKGIANELYKIVRPTLTVANRTMSRFNNWS------------LNINKI-----NLSHAESHLD--EFDIIINTTPA 185 (277)
T ss_dssp CSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC------------SCCEEE-----CHHHHHHTGG--GCSEEEECCC-
T ss_pred CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH------------Hhcccc-----cHhhHHHHhc--CCCEEEECccC
Confidence 58899999999999998 9999999987743222 122221 3455667777 89999999654
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=93.83 E-value=0.02 Score=48.98 Aligned_cols=87 Identities=22% Similarity=0.275 Sum_probs=56.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCC---CccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhhcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~ 75 (295)
+|+ |.+|..+++.+...|.+|+++++++ ++.. . ..+ -+.+.+ | .+ .+.+.+ .. .++|+
T Consensus 187 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~--------~~~--~ga~~v--~-~~~~~~~~~~-~~-~~~d~ 249 (366)
T 2cdc_A 187 VGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-V--------IEE--TKTNYY--N-SSNGYDKLKD-SV-GKFDV 249 (366)
T ss_dssp ESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-H--------HHH--HTCEEE--E-CTTCSHHHHH-HH-CCEEE
T ss_pred ECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-H--------HHH--hCCcee--c-hHHHHHHHHH-hC-CCCCE
Confidence 478 9999999999998999999999987 4421 0 111 134444 4 43 233433 22 47999
Q ss_pred EEEcccCChhcH-HHHHHhCCCCCcEEEeec
Q 022578 76 VYDINGREADEV-EPILDALPNLEQFIYCSS 105 (295)
Q Consensus 76 vi~~a~~~~~~~-~~ll~~~~~~~~~i~~Ss 105 (295)
||+++|.. ... ...++.++...++|.++.
T Consensus 250 vid~~g~~-~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 250 IIDATGAD-VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEECCCCC-THHHHHHGGGEEEEEEEEECSC
T ss_pred EEECCCCh-HHHHHHHHHHHhcCCEEEEEec
Confidence 99999853 234 556666664457887764
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=93.79 E-value=0.4 Score=38.29 Aligned_cols=98 Identities=11% Similarity=0.137 Sum_probs=59.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEE-EecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhh-hcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~-~~~~~d~vi~ 78 (295)
+|+ |.+|+.+++.+.+.++++.+ ++|++.. ....+... .+.+.. +.+++ .|++.++.+...+ .+.+.++|+.
T Consensus 9 iGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~-~~gv~v~~--dl~~l~-~~DVv-IDft~p~a~~~~~~l~~g~~vVig 82 (243)
T 3qy9_A 9 IGY-GAMNQRVARLAEEKGHEIVGVIENTPKA-TTPYQQYQ--HIADVK-GADVA-IDFSNPNLLFPLLDEDFHLPLVVA 82 (243)
T ss_dssp ECC-SHHHHHHHHHHHHTTCEEEEEECSSCC---CCSCBCS--CTTTCT-TCSEE-EECSCHHHHHHHHTSCCCCCEEEC
T ss_pred ECc-CHHHHHHHHHHHhCCCEEEEEEecCccc-cCCCceeC--CHHHHh-CCCEE-EEeCChHHHHHHHHHhcCCceEeC
Confidence 377 99999999999998667766 4555432 11100000 011111 34443 5888887776665 3357889998
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
..|...+....+.++++.. .+++.+-
T Consensus 83 TTG~s~e~~~~l~~aa~~~-~v~~a~N 108 (243)
T 3qy9_A 83 TTGEKEKLLNKLDELSQNM-PVFFSAN 108 (243)
T ss_dssp CCSSHHHHHHHHHHHTTTS-EEEECSS
T ss_pred CCCCCHHHHHHHHHHHhcC-CEEEECC
Confidence 8887666667777777653 4555443
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=93.73 E-value=0.021 Score=47.49 Aligned_cols=29 Identities=31% Similarity=0.393 Sum_probs=26.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..++..|.+.|++|++++|+++.
T Consensus 10 G~G~~G~~~a~~l~~~g~~V~~~~r~~~~ 38 (316)
T 2ew2_A 10 GAGAMGSRLGIMLHQGGNDVTLIDQWPAH 38 (316)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence 46999999999999999999999998765
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=93.67 E-value=0.066 Score=39.19 Aligned_cols=74 Identities=8% Similarity=0.046 Sum_probs=46.5
Q ss_pred CcC---CcchHHHHHHHHHCCCeEEEEecCC--CccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 2 Gat---G~iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
|++ |.+|..+++.|++.|++|+.+.++. ... .++..+ -+ +.++.+ .+|++
T Consensus 20 Gas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i----------------~G~~~~-~s------l~el~~--~~Dlv 74 (145)
T 2duw_A 20 GASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL----------------LGQQGY-AT------LADVPE--KVDMV 74 (145)
T ss_dssp SCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE----------------TTEECC-SS------TTTCSS--CCSEE
T ss_pred CcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc----------------CCeecc-CC------HHHcCC--CCCEE
Confidence 666 8899999999999999988776654 221 122211 12 223334 79999
Q ss_pred EEcccCChhcHHHHHHhCC--CCCcEEE
Q 022578 77 YDINGREADEVEPILDALP--NLEQFIY 102 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~--~~~~~i~ 102 (295)
+-+.. ......+++.+. +++.++.
T Consensus 75 ii~vp--~~~v~~v~~~~~~~g~~~i~i 100 (145)
T 2duw_A 75 DVFRN--SEAAWGVAQEAIAIGAKTLWL 100 (145)
T ss_dssp ECCSC--STHHHHHHHHHHHHTCCEEEC
T ss_pred EEEeC--HHHHHHHHHHHHHcCCCEEEE
Confidence 98865 345555555443 7666544
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=93.67 E-value=0.017 Score=48.35 Aligned_cols=28 Identities=7% Similarity=-0.069 Sum_probs=25.9
Q ss_pred cCCcchHHHHHHHHHCC-CeEEEEecCCC
Q 022578 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKA 30 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~ 30 (295)
|.|.+|..++..|++.| ++|++.+|++.
T Consensus 31 G~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 31 GFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 48999999999999999 99999999873
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=93.66 E-value=0.02 Score=47.73 Aligned_cols=29 Identities=24% Similarity=0.621 Sum_probs=26.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..+++.|.+.|++|++.+|++++
T Consensus 16 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 44 (306)
T 3l6d_A 16 GLGAMGTIMAQVLLKQGKRVAIWNRSPGK 44 (306)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 57999999999999999999999998876
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=93.65 E-value=0.055 Score=46.28 Aligned_cols=91 Identities=10% Similarity=0.023 Sum_probs=61.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecC------------------CChHHH
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR------------------KDYDFV 64 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~------------------~~~~~~ 64 (295)
|.|-+|..+++.|...|.+|++++|++...... .+ -+.+++..+. .+.+.+
T Consensus 191 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~---------~~--lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 191 GVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV---------RS--VGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp SCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH---------HH--TTCEECCCC-------------CHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HH--cCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence 459999999999999999999999998762211 11 1333332211 124567
Q ss_pred HHhhhcCCCcEEEEcccCC-----hhcHHHHHHhCCCCCcEEEeecc
Q 022578 65 KSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 65 ~~~~~~~~~d~vi~~a~~~-----~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
.+.++ +.|+||.++... .--++..++.++...-+|-+|..
T Consensus 260 ~e~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d 304 (381)
T 3p2y_A 260 EDAIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGE 304 (381)
T ss_dssp HHHHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred HHHHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCC
Confidence 78888 999999986432 12367888888855577777753
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=93.61 E-value=0.45 Score=40.86 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=47.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+|.+|+.+++.+.+.|++|++++..+....... --..+..++.|.+.+.++++ .+|+|..
T Consensus 21 G~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvI~~ 81 (389)
T 3q2o_A 21 GGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV-------------ADIEIVASYDDLKAIQHLAE--ISDVVTY 81 (389)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT-------------CSEEEECCTTCHHHHHHHHH--TCSEEEE
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh-------------CCceEecCcCCHHHHHHHHH--hCCEeee
Confidence 4688999999999999999999987765422221 12355688999999999998 8998864
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.56 E-value=0.086 Score=44.45 Aligned_cols=84 Identities=12% Similarity=0.068 Sum_probs=57.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|.+..... . ..+++. . +++++++ ++|+|+.+...
T Consensus 172 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~----------~--~~g~~~-----~---~l~ell~--~aDvV~l~~P~ 229 (335)
T 2g76_A 172 GLGRIGREVATRMQSFGMKTIGYDPIISPEVS----------A--SFGVQQ-----L---PLEEIWP--LCDFITVHTPL 229 (335)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSSCHHHH----------H--HTTCEE-----C---CHHHHGG--GCSEEEECCCC
T ss_pred eECHHHHHHHHHHHHCCCEEEEECCCcchhhh----------h--hcCcee-----C---CHHHHHh--cCCEEEEecCC
Confidence 57999999999999999999999987654110 0 123332 1 3567888 89999988765
Q ss_pred Chh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. . ....+..++....+|.+|+..+
T Consensus 230 t~~t~~li~~~~l~~mk~gailIN~arg~v 259 (335)
T 2g76_A 230 LPSTTGLLNDNTFAQCKKGVRVVNCARGGI 259 (335)
T ss_dssp CTTTTTSBCHHHHTTSCTTEEEEECSCTTS
T ss_pred CHHHHHhhCHHHHhhCCCCcEEEECCCccc
Confidence 432 1 1345666665567888887543
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=93.56 E-value=0.043 Score=46.59 Aligned_cols=85 Identities=14% Similarity=0.058 Sum_probs=58.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|++.... ....+++.+ ++++++++ ++|+|+.+...
T Consensus 167 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~------------~~~~g~~~~-------~~l~ell~--~aDiV~l~~Pl 225 (352)
T 3gg9_A 167 GYGKIGQLVAGYGRAFGMNVLVWGRENSKER------------ARADGFAVA-------ESKDALFE--QSDVLSVHLRL 225 (352)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSHHHHHH------------HHHTTCEEC-------SSHHHHHH--HCSEEEECCCC
T ss_pred eECHHHHHHHHHHHhCCCEEEEECCCCCHHH------------HHhcCceEe-------CCHHHHHh--hCCEEEEeccC
Confidence 5799999999999999999999998753310 001234321 34667888 89999988754
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....+|.+|...+
T Consensus 226 t~~t~~li~~~~l~~mk~gailIN~aRg~~ 255 (352)
T 3gg9_A 226 NDETRSIITVADLTRMKPTALFVNTSRAEL 255 (352)
T ss_dssp STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred cHHHHHhhCHHHHhhCCCCcEEEECCCchh
Confidence 322 12455666776668999887665
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=93.55 E-value=0.14 Score=42.38 Aligned_cols=30 Identities=13% Similarity=0.157 Sum_probs=27.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|.+.|++|++.+|++++.
T Consensus 22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~ 51 (296)
T 3qha_A 22 GLGNMGAPMATRMTEWPGGVTVYDIRIEAM 51 (296)
T ss_dssp CCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 579999999999999999999999998773
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=93.55 E-value=0.084 Score=44.59 Aligned_cols=89 Identities=15% Similarity=0.132 Sum_probs=57.5
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~v 76 (295)
+|+ |-+|..+++.+...|. +|+++++++++..... + . .+.+ .|..+. +.+.++. ..++|+|
T Consensus 171 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~---------~-l--a~~v-~~~~~~~~~~~~~~~~-~~g~D~v 235 (343)
T 2dq4_A 171 TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR---------P-Y--ADRL-VNPLEEDLLEVVRRVT-GSGVEVL 235 (343)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT---------T-T--CSEE-ECTTTSCHHHHHHHHH-SSCEEEE
T ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH---------H-h--HHhc-cCcCccCHHHHHHHhc-CCCCCEE
Confidence 477 9999999999988999 9999998876632111 1 1 1111 344332 2233322 3479999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|+++|. .......++.++...+++.++.
T Consensus 236 id~~g~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 236 LEFSGN-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC-HHHHHHHHHHHhcCCEEEEEec
Confidence 999874 3456667777774448887764
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=93.54 E-value=0.15 Score=43.56 Aligned_cols=87 Identities=18% Similarity=0.284 Sum_probs=46.9
Q ss_pred CCcCCcchHHHHH-HHHHCC---CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
.||||++|..|++ .|.++. .++..++.+ +. ...+.. + .+.+....+..+++. ++ ++|+|
T Consensus 10 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~a-G~~~~~--------~-~~~~~~v~~~~~~~~----~~--~vDvv 72 (377)
T 3uw3_A 10 VGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NA-GGKAPS--------F-AKNETTLKDATSIDD----LK--KCDVI 72 (377)
T ss_dssp ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CT-TSBCCT--------T-CCSCCBCEETTCHHH----HH--TCSEE
T ss_pred ECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hc-CCCHHH--------c-CCCceEEEeCCChhH----hc--CCCEE
Confidence 4999999999999 555555 366666543 22 111110 0 111111223334433 45 89999
Q ss_pred EEcccCChhcHHHHHHhC-C-CCC-cEEEeecc
Q 022578 77 YDINGREADEVEPILDAL-P-NLE-QFIYCSSA 106 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~-~-~~~-~~i~~Ss~ 106 (295)
|.|.+.. ..+.++..+ + +.+ ++|=.|+.
T Consensus 73 f~a~~~~--~s~~~~~~~~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 73 ITCQGGD--YTNDVFPKLRAAGWNGYWIDAASS 103 (377)
T ss_dssp EECSCHH--HHHHHHHHHHHTTCCSEEEECSST
T ss_pred EECCChH--HHHHHHHHHHHCCCCEEEEeCCcc
Confidence 9998642 334444433 3 553 56666654
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=93.53 E-value=0.03 Score=47.98 Aligned_cols=88 Identities=15% Similarity=0.162 Sum_probs=57.9
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|+ |-+|...++.+...|.+|+++++++++... ..+. +.+.+ .|..+.+.++++.. ++|+||+++|
T Consensus 202 Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~---------a~~l--Ga~~v-i~~~~~~~~~~~~~--g~Dvvid~~g 266 (369)
T 1uuf_A 202 GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA---------AKAL--GADEV-VNSRNADEMAAHLK--SFDFILNTVA 266 (369)
T ss_dssp CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHHH--TCSEE-EETTCHHHHHTTTT--CEEEEEECCS
T ss_pred CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCcEE-eccccHHHHHHhhc--CCCEEEECCC
Confidence 65 779999999888889999999988766321 1111 22222 35556555555544 8999999988
Q ss_pred CChhcHHHHHHhCCCCCcEEEeec
Q 022578 82 READEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
.. ......++.++...++|.++.
T Consensus 267 ~~-~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 267 AP-HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred CH-HHHHHHHHHhccCCEEEEecc
Confidence 53 235556666664447887654
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=93.51 E-value=0.15 Score=37.18 Aligned_cols=75 Identities=9% Similarity=-0.015 Sum_probs=46.3
Q ss_pred CCcC---CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
+|++ |.+|+.+++.|.+.|++|+.+...... . .++..+ .++.++.+ .+|+++
T Consensus 28 VGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~---i-------------~G~~~y-------~sl~~l~~--~vDlvv 82 (144)
T 2d59_A 28 VGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE---V-------------LGRKCY-------PSVLDIPD--KIEVVD 82 (144)
T ss_dssp ETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---E-------------TTEECB-------SSGGGCSS--CCSEEE
T ss_pred EccCCCCCchHHHHHHHHHHCCCEEEEECCCCCe---E-------------CCeecc-------CCHHHcCC--CCCEEE
Confidence 3676 889999999999999987665433211 0 122211 12233444 799999
Q ss_pred EcccCChhcHHHHHHhCC--CCCcEEE
Q 022578 78 DINGREADEVEPILDALP--NLEQFIY 102 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~--~~~~~i~ 102 (295)
-+.. ......+++.|. +++.+++
T Consensus 83 i~vp--~~~~~~vv~~~~~~gi~~i~~ 107 (144)
T 2d59_A 83 LFVK--PKLTMEYVEQAIKKGAKVVWF 107 (144)
T ss_dssp ECSC--HHHHHHHHHHHHHHTCSEEEE
T ss_pred EEeC--HHHHHHHHHHHHHcCCCEEEE
Confidence 8854 356666665554 7765554
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=93.49 E-value=0.033 Score=47.44 Aligned_cols=89 Identities=18% Similarity=0.154 Sum_probs=58.5
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
| +|-+|...++.+...|.+|+++++++++...... + -+.+.+ .|..+.+.+.++.. ++|+||+++|
T Consensus 188 G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~--------~--lGa~~v-i~~~~~~~~~~~~~--g~D~vid~~g 253 (357)
T 2cf5_A 188 G-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ--------D--LGADDY-VIGSDQAKMSELAD--SLDYVIDTVP 253 (357)
T ss_dssp C-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT--------T--SCCSCE-EETTCHHHHHHSTT--TEEEEEECCC
T ss_pred C-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH--------H--cCCcee-eccccHHHHHHhcC--CCCEEEECCC
Confidence 6 4889999999888889999999998766321110 1 122222 24456666666555 8999999998
Q ss_pred CChhcHHHHHHhCCCCCcEEEeec
Q 022578 82 READEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
.. ......++.++...+++.++.
T Consensus 254 ~~-~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 254 VH-HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp SC-CCSHHHHTTEEEEEEEEECSC
T ss_pred Ch-HHHHHHHHHhccCCEEEEeCC
Confidence 53 234556666664457877664
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=93.46 E-value=0.098 Score=45.03 Aligned_cols=90 Identities=16% Similarity=0.067 Sum_probs=57.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCC----------------------C
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----------------------D 60 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~----------------------~ 60 (295)
|.|-+|..+++.+...|.+|++++|++..... ..+ -+.+++..|.. .
T Consensus 179 GaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~---------~~~--~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 179 GVGVAGLQAIATAKRLGAVVMATDVRAATKEQ---------VES--LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHH---------HHH--TTCEECCC-----------------------CCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHH--cCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 36999999999999999999999998765211 011 12222211110 1
Q ss_pred hHHHHHhhhcCCCcEEEEcc---cCCh-h-cHHHHHHhCCCCCcEEEeec
Q 022578 61 YDFVKSSLSAKGFDVVYDIN---GREA-D-EVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 61 ~~~~~~~~~~~~~d~vi~~a---~~~~-~-~~~~ll~~~~~~~~~i~~Ss 105 (295)
.+.+.+.+. ++|+||+++ +... . -+...++.++....+|.++.
T Consensus 248 ~~~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 248 AEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 234777777 899999998 4222 1 24667777775557777774
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=93.42 E-value=0.022 Score=47.85 Aligned_cols=67 Identities=18% Similarity=0.354 Sum_probs=43.7
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhh---cc-CCeEEEEecCCChHHHHHhhhcCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAE---FS-SKILHLKGDRKDYDFVKSSLSAKGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~---~~-~~v~~~~~D~~~~~~~~~~~~~~~~d 74 (295)
+| +|.+|+.++..|+..|. +|.+++++.++..... ..+.. .. .++++...| . +.++ ++|
T Consensus 11 iG-aG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a-----~DL~~~~~~~~~~v~i~~~~---~----~a~~--~aD 75 (326)
T 3pqe_A 11 IG-AGFVGSSYAFALINQGITDELVVIDVNKEKAMGDV-----MDLNHGKAFAPQPVKTSYGT---Y----EDCK--DAD 75 (326)
T ss_dssp EC-CSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHH-----HHHHHTGGGSSSCCEEEEEC---G----GGGT--TCS
T ss_pred EC-CCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHH-----HHHHhccccccCCeEEEeCc---H----HHhC--CCC
Confidence 36 59999999999999986 8999998765421100 00110 11 245554333 2 3566 999
Q ss_pred EEEEcccC
Q 022578 75 VVYDINGR 82 (295)
Q Consensus 75 ~vi~~a~~ 82 (295)
+||.++|.
T Consensus 76 vVvi~ag~ 83 (326)
T 3pqe_A 76 IVCICAGA 83 (326)
T ss_dssp EEEECCSC
T ss_pred EEEEeccc
Confidence 99999986
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
Probab=93.42 E-value=0.16 Score=42.67 Aligned_cols=82 Identities=11% Similarity=0.066 Sum_probs=57.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|++... .. ..+. .. ++.++++ ++|+|+.+...
T Consensus 153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~p~ 208 (331)
T 1xdw_A 153 GLGRIGRVAAQIFHGMGATVIGEDVFEIKG---IE-----------DYCT-----QV---SLDEVLE--KSDIITIHAPY 208 (331)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCCS---CT-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCccHH---HH-----------hccc-----cC---CHHHHHh--hCCEEEEecCC
Confidence 579999999999999999999999887652 11 1121 11 3567777 89999987654
Q ss_pred Chh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. . ....+..++....+|.+|...+
T Consensus 209 t~~t~~li~~~~l~~mk~ga~lin~srg~~ 238 (331)
T 1xdw_A 209 IKENGAVVTRDFLKKMKDGAILVNCARGQL 238 (331)
T ss_dssp CTTTCCSBCHHHHHTSCTTEEEEECSCGGG
T ss_pred chHHHHHhCHHHHhhCCCCcEEEECCCccc
Confidence 321 1 2456677775568888887654
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=93.41 E-value=0.048 Score=44.81 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=46.4
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+|+ |.+|+.++..|.+.|. +|+++.|+.++..+.. ..+......+.+...++ +++.+.+. ++|+||++
T Consensus 133 lGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la-----~~~~~~~~~~~i~~~~~---~~l~~~l~--~~DiVIna 201 (283)
T 3jyo_A 133 VGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA-----DVINNAVGREAVVGVDA---RGIEDVIA--AADGVVNA 201 (283)
T ss_dssp ECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHH-----HHHHHHHTSCCEEEECS---TTHHHHHH--HSSEEEEC
T ss_pred ECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH-----HHHHhhcCCceEEEcCH---HHHHHHHh--cCCEEEEC
Confidence 365 8899999999999998 7999999977632111 11111112344444443 34556777 89999999
Q ss_pred ccC
Q 022578 80 NGR 82 (295)
Q Consensus 80 a~~ 82 (295)
...
T Consensus 202 Tp~ 204 (283)
T 3jyo_A 202 TPM 204 (283)
T ss_dssp SST
T ss_pred CCC
Confidence 754
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=93.33 E-value=0.066 Score=44.21 Aligned_cols=60 Identities=20% Similarity=0.235 Sum_probs=41.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|..++..|.+.|++|++.+|+++..... .+ .++.. ..+ +.++++ ++|+||.+...
T Consensus 12 G~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~---------~~--~g~~~----~~~---~~~~~~--~~D~vi~~v~~ 71 (299)
T 1vpd_A 12 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADV---------IA--AGAET----AST---AKAIAE--QCDVIITMLPN 71 (299)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH---------HH--TTCEE----CSS---HHHHHH--HCSEEEECCSS
T ss_pred CchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH---------HH--CCCee----cCC---HHHHHh--CCCEEEEECCC
Confidence 479999999999999999999999887653211 11 13321 122 345566 79999988753
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=93.30 E-value=0.017 Score=48.38 Aligned_cols=84 Identities=12% Similarity=0.076 Sum_probs=49.9
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCC--CccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|.|.+|..+++.|.+.|+ +|++.+|++ .... .+ .+ .++.. . ++..++++ ++|+||-+
T Consensus 31 G~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~-~~--------~~--~g~~~----~---~~~~e~~~--~aDvVi~~ 90 (312)
T 3qsg_A 31 GFGEAASAIASGLRQAGAIDMAAYDAASAESWRP-RA--------EE--LGVSC----K---ASVAEVAG--ECDVIFSL 90 (312)
T ss_dssp CCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHH-HH--------HH--TTCEE----C---SCHHHHHH--HCSEEEEC
T ss_pred CccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHH-HH--------HH--CCCEE----e---CCHHHHHh--cCCEEEEe
Confidence 579999999999999999 999999974 3211 10 11 23322 1 12345666 78999988
Q ss_pred ccCChh--cHHHHHHhCCCCCcEEEeecc
Q 022578 80 NGREAD--EVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 80 a~~~~~--~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
...... ....+...++..+-+|..||.
T Consensus 91 vp~~~~~~~~~~l~~~l~~~~ivvd~st~ 119 (312)
T 3qsg_A 91 VTAQAALEVAQQAGPHLCEGALYADFTSC 119 (312)
T ss_dssp SCTTTHHHHHHHHGGGCCTTCEEEECCCC
T ss_pred cCchhHHHHHHhhHhhcCCCCEEEEcCCC
Confidence 765321 223333334333445555543
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=93.25 E-value=0.075 Score=46.95 Aligned_cols=84 Identities=11% Similarity=-0.104 Sum_probs=58.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|++...... ...++++ .++.++++ ..|+|+.+.+.
T Consensus 264 G~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a-----------~~~g~~~--------~~l~ell~--~aDiVi~~~~t 322 (479)
T 1v8b_A 264 GYGDVGKGCASSMKGLGARVYITEIDPICAIQA-----------VMEGFNV--------VTLDEIVD--KGDFFITCTGN 322 (479)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-----------HTTTCEE--------CCHHHHTT--TCSEEEECCSS
T ss_pred eeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHH-----------HHcCCEe--------cCHHHHHh--cCCEEEECCCh
Confidence 579999999999999999999999987652111 1123432 13667888 99999988643
Q ss_pred ChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 83 EADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
...-....+..++....+|.+++..
T Consensus 323 ~~lI~~~~l~~MK~gailiNvgrg~ 347 (479)
T 1v8b_A 323 VDVIKLEHLLKMKNNAVVGNIGHFD 347 (479)
T ss_dssp SSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred hhhcCHHHHhhcCCCcEEEEeCCCC
Confidence 3223456667777556888888644
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=93.24 E-value=0.12 Score=44.64 Aligned_cols=90 Identities=13% Similarity=0.036 Sum_probs=61.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEec----------------CCC------
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD----------------RKD------ 60 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D----------------~~~------ 60 (295)
|.|-+|..+++.+...|.+|+++++++...... .+ .+.+++..+ +++
T Consensus 197 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~---------~~--~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~ 265 (405)
T 4dio_A 197 GAGVAGLQAIATARRLGAVVSATDVRPAAKEQV---------AS--LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ 265 (405)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH---------HH--TTCEECCCCC-----------------CHHHHHH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---------HH--cCCceeecccccccccccccchhhhcchhhhhhh
Confidence 459999999999999999999999998762111 11 122332221 222
Q ss_pred hHHHHHhhhcCCCcEEEEcccCC-----hhcHHHHHHhCCCCCcEEEeec
Q 022578 61 YDFVKSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 61 ~~~~~~~~~~~~~d~vi~~a~~~-----~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
.+.+.++++ +.|+||.++... .--++..++.++...-+|-+|.
T Consensus 266 ~~~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 266 AALVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred HhHHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 357888888 999999986432 1236788888886567777775
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=93.24 E-value=0.13 Score=43.48 Aligned_cols=89 Identities=18% Similarity=0.213 Sum_probs=51.5
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeE--EEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL--HLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.||||++|..+++.|.++. .++..+....+. ...+ .+..+.+. ...-++ +++. ++. ++|+||
T Consensus 19 vGAtG~vG~ellrlL~~hP~~el~~l~S~~~a-G~~~--------~~~~p~~~~~l~~~~~-~~~~---~~~--~~Dvvf 83 (351)
T 1vkn_A 19 IGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKL--------EEIFPSTLENSILSEF-DPEK---VSK--NCDVLF 83 (351)
T ss_dssp ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBH--------HHHCGGGCCCCBCBCC-CHHH---HHH--HCSEEE
T ss_pred ECCCCHHHHHHHHHHHcCCCcEEEEEeCcccc-cCCh--------HHhChhhccCceEEeC-CHHH---hhc--CCCEEE
Confidence 4999999999999999985 477776643222 1111 11111111 111111 3332 345 799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
.+++.. ..+.++..+ ...++|=.|+..
T Consensus 84 ~alp~~--~s~~~~~~~-~g~~VIDlSsdf 110 (351)
T 1vkn_A 84 TALPAG--ASYDLVREL-KGVKIIDLGADF 110 (351)
T ss_dssp ECCSTT--HHHHHHTTC-CSCEEEESSSTT
T ss_pred ECCCcH--HHHHHHHHh-CCCEEEECChhh
Confidence 987643 455566666 445788788754
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=93.23 E-value=0.15 Score=44.15 Aligned_cols=62 Identities=23% Similarity=0.249 Sum_probs=47.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+|.+|+.+++.+.+.|++|++++ .+........ .....+.+|+.|.+.+.++.+ .+|+|+.
T Consensus 31 GgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a-----------d~~~~~~~~~~d~~~l~~~a~--~~d~i~~ 92 (403)
T 3k5i_A 31 GGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS-----------AHDGHVTGSFKEREAVRQLAK--TCDVVTA 92 (403)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC-----------CSSCCEESCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc-----------cccceeecCCCCHHHHHHHHH--hCCEEEE
Confidence 468999999999999999999999 6544222221 223467789999999999998 7898874
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=93.21 E-value=0.082 Score=46.96 Aligned_cols=84 Identities=12% Similarity=0.061 Sum_probs=58.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||..+++.|...|.+|++.++++.+... ....+++. . + +.++++ ++|+||.+.+.
T Consensus 281 G~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~-----------A~~~Ga~~--~---~---l~e~l~--~aDvVi~atgt 339 (494)
T 3ce6_A 281 GYGDVGKGCAEAMKGQGARVSVTEIDPINALQ-----------AMMEGFDV--V---T---VEEAIG--DADIVVTATGN 339 (494)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-----------HHHTTCEE--C---C---HHHHGG--GCSEEEECSSS
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-----------HHHcCCEE--e---c---HHHHHh--CCCEEEECCCC
Confidence 36999999999999999999999988765211 01134442 1 2 234566 89999999775
Q ss_pred ChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 83 EADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
...-....++.++....++.++...
T Consensus 340 ~~~i~~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 340 KDIIMLEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp SCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred HHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 4333346778888666888887643
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=93.18 E-value=0.13 Score=41.54 Aligned_cols=61 Identities=8% Similarity=0.039 Sum_probs=43.7
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|+|..|+.++..|.+.|. +|++..|++++..+.. ...... ..+++.+.++ ++|+||++..
T Consensus 115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la------------~~~~~~-----~~~~~~~~~~--~aDiVInatp 175 (253)
T 3u62_A 115 GAGGAARAVIYALLQMGVKDIWVVNRTIERAKALD------------FPVKIF-----SLDQLDEVVK--KAKSLFNTTS 175 (253)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC------------SSCEEE-----EGGGHHHHHH--TCSEEEECSS
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH------------HHcccC-----CHHHHHhhhc--CCCEEEECCC
Confidence 358999999999999998 9999999987743322 122211 1234566777 8999999864
Q ss_pred C
Q 022578 82 R 82 (295)
Q Consensus 82 ~ 82 (295)
.
T Consensus 176 ~ 176 (253)
T 3u62_A 176 V 176 (253)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=93.08 E-value=0.016 Score=51.47 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=27.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|++|..++..|.+.|++|++++|++++.
T Consensus 15 G~G~vG~~lA~~la~~G~~V~~~d~~~~~v 44 (478)
T 2y0c_A 15 GSGSVGLVTGACLADIGHDVFCLDVDQAKI 44 (478)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CcCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 689999999999999999999999987663
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=93.08 E-value=0.17 Score=43.14 Aligned_cols=87 Identities=21% Similarity=0.293 Sum_probs=46.6
Q ss_pred CCcCCcchHHHHH-HHHHCC---CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
.||||++|..+++ .|.++. .++..++.+... ..+.. + .+.+....+..+++. ++ ++|+|
T Consensus 6 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG--~~~~~--------~-~~~~~~~~~~~~~~~----~~--~~Dvv 68 (370)
T 3pzr_A 6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG--VPAPN--------F-GKDAGMLHDAFDIES----LK--QLDAV 68 (370)
T ss_dssp ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCC--------S-SSCCCBCEETTCHHH----HT--TCSEE
T ss_pred ECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccC--cCHHH--------h-CCCceEEEecCChhH----hc--cCCEE
Confidence 4999999999999 555555 366665533211 11110 0 111111223334333 45 89999
Q ss_pred EEcccCChhcHHHHHHhC-C-CC-CcEEEeecc
Q 022578 77 YDINGREADEVEPILDAL-P-NL-EQFIYCSSA 106 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~-~-~~-~~~i~~Ss~ 106 (295)
|.+.+.. ..+..+..+ + +. +++|=.|+.
T Consensus 69 f~a~~~~--~s~~~~~~~~~~G~k~~VID~ss~ 99 (370)
T 3pzr_A 69 ITCQGGS--YTEKVYPALRQAGWKGYWIDAAST 99 (370)
T ss_dssp EECSCHH--HHHHHHHHHHHTTCCCEEEECSST
T ss_pred EECCChH--HHHHHHHHHHHCCCCEEEEeCCch
Confidence 9998642 334444433 3 55 356666654
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=93.08 E-value=0.1 Score=43.99 Aligned_cols=94 Identities=13% Similarity=0.119 Sum_probs=51.5
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCC--ccccCCCCCCchhhhhccC--CeEEEEecCCChHHHHHhhhcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKA--PIAQQLPGESDQEFAEFSS--KILHLKGDRKDYDFVKSSLSAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~d~ 75 (295)
+||||++|..+++.|.+. .+++..+.++.. .....+. .....+.. ...+... .+.+ ++++ ++|+
T Consensus 10 vGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~----~~~p~~~~~~~~~v~~~--~~~~---~~~~--~~Dv 78 (337)
T 3dr3_A 10 VGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLIS----DLHPQLKGIVELPLQPM--SDIS---EFSP--GVDV 78 (337)
T ss_dssp ETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHH----HHCGGGTTTCCCBEEEE--SSGG---GTCT--TCSE
T ss_pred ECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchH----HhCccccCccceeEecc--CCHH---HHhc--CCCE
Confidence 499999999999999985 568888765541 1111100 00000001 2222221 0222 2335 8999
Q ss_pred EEEcccCChhcHHHHHHhCC-CCCcEEEeeccc
Q 022578 76 VYDINGREADEVEPILDALP-NLEQFIYCSSAG 107 (295)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~ 107 (295)
||.+.+. ...+.++..+. ...++|-+|+..
T Consensus 79 vf~a~p~--~~s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 79 VFLATAH--EVSHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp EEECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred EEECCCh--HHHHHHHHHHHHCCCEEEEcCCcc
Confidence 9988753 23444444433 445788888764
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=93.07 E-value=0.17 Score=44.67 Aligned_cols=87 Identities=18% Similarity=0.261 Sum_probs=62.8
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEcc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN 80 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a 80 (295)
-|.|.+|..+++.|. .+++|.++.++.+... .+.+..++..++.||-+|++.+.+. ++ +.|+++-+.
T Consensus 241 ~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~---------~la~~l~~~~Vi~GD~td~~~L~ee~i~--~~D~~ia~T 308 (461)
T 4g65_A 241 VGGGNIGASLAKRLE-QTYSVKLIERNLQRAE---------KLSEELENTIVFCGDAADQELLTEENID--QVDVFIALT 308 (461)
T ss_dssp ECCSHHHHHHHHHHT-TTSEEEEEESCHHHHH---------HHHHHCTTSEEEESCTTCHHHHHHTTGG--GCSEEEECC
T ss_pred EcchHHHHHHHHHhh-hcCceEEEecCHHHHH---------HHHHHCCCceEEeccccchhhHhhcCch--hhcEEEEcc
Confidence 368999999999875 5699999998887732 2233457889999999999988765 45 899999886
Q ss_pred cCChhcHHHHHHh--CC--CCCcEEEe
Q 022578 81 GREADEVEPILDA--LP--NLEQFIYC 103 (295)
Q Consensus 81 ~~~~~~~~~ll~~--~~--~~~~~i~~ 103 (295)
+. .-.|++-+ ++ ++++.|-.
T Consensus 309 ~~---De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 309 NE---DETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp SC---HHHHHHHHHHHHHTTCSEEEEE
T ss_pred cC---cHHHHHHHHHHHHcCCcccccc
Confidence 54 23344433 23 77777743
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=93.07 E-value=0.15 Score=45.16 Aligned_cols=30 Identities=23% Similarity=0.307 Sum_probs=27.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..++..|.+.|++|++.+|++++.
T Consensus 11 GlG~MG~~lA~~L~~~G~~V~v~dr~~~~~ 40 (484)
T 4gwg_A 11 GLAVMGQNLILNMNDHGFVVCAFNRTVSKV 40 (484)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSTHHH
T ss_pred ChhHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 579999999999999999999999998764
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=92.99 E-value=0.13 Score=43.40 Aligned_cols=87 Identities=11% Similarity=0.004 Sum_probs=50.1
Q ss_pred CCcCCcchHHHHHHHHHCC---CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.||+|++|+.+++.|.+++ .++.++....+. ...+. ..+.++...|. +++ .++ ++|+||
T Consensus 9 ~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~----------~~~~~i~~~~~-~~~----~~~--~vDvVf 70 (336)
T 2r00_A 9 FGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYR----------FNGKTVRVQNV-EEF----DWS--QVHIAL 70 (336)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEEG-GGC----CGG--GCSEEE
T ss_pred ECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCcee----------ecCceeEEecC-ChH----Hhc--CCCEEE
Confidence 3899999999999999873 467777632211 00000 11222222232 222 345 899999
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALP-NLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~ 107 (295)
.+.+.. .....+..+. ...++|-+|+..
T Consensus 71 ~a~g~~--~s~~~a~~~~~~G~~vId~s~~~ 99 (336)
T 2r00_A 71 FSAGGE--LSAKWAPIAAEAGVVVIDNTSHF 99 (336)
T ss_dssp ECSCHH--HHHHHHHHHHHTTCEEEECSSTT
T ss_pred ECCCch--HHHHHHHHHHHcCCEEEEcCCcc
Confidence 998643 3444444443 334788888764
|
| >3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=92.98 E-value=0.1 Score=44.67 Aligned_cols=81 Identities=19% Similarity=0.139 Sum_probs=56.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|++|++.+|...... .. ....+++++++ ++|+|+.+...
T Consensus 126 GlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~---------------~~--------~~~~sl~ell~--~aDiV~l~~Pl 180 (381)
T 3oet_A 126 GVGNVGSRLQTRLEALGIRTLLCDPPRAARG---------------DE--------GDFRTLDELVQ--EADVLTFHTPL 180 (381)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECHHHHHTT---------------CC--------SCBCCHHHHHH--HCSEEEECCCC
T ss_pred eECHHHHHHHHHHHHCCCEEEEECCChHHhc---------------cC--------cccCCHHHHHh--hCCEEEEcCcC
Confidence 5799999999999999999999987543310 01 12234677888 89999987754
Q ss_pred Chh--------cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD--------EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~--------~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++...-+|.+|...+
T Consensus 181 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v 214 (381)
T 3oet_A 181 YKDGPYKTLHLADETLIRRLKPGAILINACRGPV 214 (381)
T ss_dssp CCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGG
T ss_pred CccccccchhhcCHHHHhcCCCCcEEEECCCCcc
Confidence 433 12456677775568888887665
|
| >1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* | Back alignment and structure |
|---|
Probab=92.98 E-value=0.17 Score=43.86 Aligned_cols=82 Identities=17% Similarity=0.062 Sum_probs=56.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|.+.... .+++. .++++++++ .+|+|+.+...
T Consensus 152 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---------------~~~~~-------~~~l~ell~--~aDvV~l~~P~ 207 (404)
T 1sc6_A 152 GYGHIGTQLGILAESLGMYVYFYDIENKLPL---------------GNATQ-------VQHLSDLLN--MSDVVSLHVPE 207 (404)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCCCC---------------TTCEE-------CSCHHHHHH--HCSEEEECCCS
T ss_pred eECHHHHHHHHHHHHCCCEEEEEcCCchhcc---------------CCcee-------cCCHHHHHh--cCCEEEEccCC
Confidence 5799999999999999999999998654310 12221 124567887 89999977654
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....+|.+|+..+
T Consensus 208 t~~t~~li~~~~l~~mk~ga~lIN~aRg~~ 237 (404)
T 1sc6_A 208 NPSTKNMMGAKEISLMKPGSLLINASRGTV 237 (404)
T ss_dssp STTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred ChHHHHHhhHHHHhhcCCCeEEEECCCChH
Confidence 321 12445667775568888887654
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=92.94 E-value=0.089 Score=44.91 Aligned_cols=86 Identities=12% Similarity=0.084 Sum_probs=56.8
Q ss_pred cCCcchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|.|.||+.+++.|...|.+ |++.+|++...... . ..++.. . +++.++++ .+|+|+.+..
T Consensus 171 G~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~---------~--~~g~~~--~-----~~l~ell~--~aDvV~l~~P 230 (364)
T 2j6i_A 171 GAGRIGYRVLERLVPFNPKELLYYDYQALPKDAE---------E--KVGARR--V-----ENIEELVA--QADIVTVNAP 230 (364)
T ss_dssp CCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH---------H--HTTEEE--C-----SSHHHHHH--TCSEEEECCC
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEECCCccchhHH---------H--hcCcEe--c-----CCHHHHHh--cCCEEEECCC
Confidence 5799999999999999997 99999876542100 0 123332 1 23567888 8999998876
Q ss_pred CChh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 82 READ----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 82 ~~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
.+.. -....+..++....+|.+|...+
T Consensus 231 ~t~~t~~li~~~~l~~mk~ga~lIn~arG~~ 261 (364)
T 2j6i_A 231 LHAGTKGLINKELLSKFKKGAWLVNTARGAI 261 (364)
T ss_dssp CSTTTTTCBCHHHHTTSCTTEEEEECSCGGG
T ss_pred CChHHHHHhCHHHHhhCCCCCEEEECCCCch
Confidence 5322 12345566665557888887554
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=92.94 E-value=0.066 Score=45.27 Aligned_cols=85 Identities=18% Similarity=0.159 Sum_probs=51.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh-HHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~a~ 81 (295)
|.|.+|..+++.|.+.|++|++.+|+++..... . ..++.. ..+. +.+..+.+ ++|+||-+..
T Consensus 15 G~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a---------~--~~G~~~----~~~~~e~~~~a~~--~aDlVilavP 77 (341)
T 3ktd_A 15 GLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSA---------V--DEGFDV----SADLEATLQRAAA--EDALIVLAVP 77 (341)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHH---------H--HTTCCE----ESCHHHHHHHHHH--TTCEEEECSC
T ss_pred eecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------H--HcCCee----eCCHHHHHHhccc--CCCEEEEeCC
Confidence 479999999999999999999999987653211 1 123322 1233 33444445 7899988876
Q ss_pred CChhcHHHHHHhCC---CCCcEEEeecc
Q 022578 82 READEVEPILDALP---NLEQFIYCSSA 106 (295)
Q Consensus 82 ~~~~~~~~ll~~~~---~~~~~i~~Ss~ 106 (295)
. ..+..+++.+. ...-++-++|.
T Consensus 78 ~--~~~~~vl~~l~~~~~~~iv~Dv~Sv 103 (341)
T 3ktd_A 78 M--TAIDSLLDAVHTHAPNNGFTDVVSV 103 (341)
T ss_dssp H--HHHHHHHHHHHHHCTTCCEEECCSC
T ss_pred H--HHHHHHHHHHHccCCCCEEEEcCCC
Confidence 3 33444443322 22334445544
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=92.94 E-value=0.073 Score=44.00 Aligned_cols=29 Identities=31% Similarity=0.296 Sum_probs=26.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..++..|.+.|++|++.+|+++.
T Consensus 11 G~G~~G~~~a~~l~~~g~~V~~~~~~~~~ 39 (301)
T 3cky_A 11 GLGAMGKPMAINLLKEGVTVYAFDLMEAN 39 (301)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 47999999999999999999999988765
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=92.94 E-value=0.062 Score=46.48 Aligned_cols=90 Identities=14% Similarity=0.099 Sum_probs=58.1
Q ss_pred CcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC----hHHHHHhhhcCCCcEE
Q 022578 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV 76 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~~~~~~~~~~~d~v 76 (295)
|+ |-+|...++.+...|. +|+++++++++.... .+ -+.+.+ |..+ .+.+.+.....++|+|
T Consensus 193 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a---------~~--lGa~~i--~~~~~~~~~~~~~~~~~g~g~Dvv 258 (398)
T 2dph_A 193 GA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL---------SD--AGFETI--DLRNSAPLRDQIDQILGKPEVDCG 258 (398)
T ss_dssp CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH---------HT--TTCEEE--ETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH---------HH--cCCcEE--cCCCcchHHHHHHHHhCCCCCCEE
Confidence 64 9999999988888898 999999887663211 11 234433 4433 3444444443379999
Q ss_pred EEcccCCh-------------hcHHHHHHhCCCCCcEEEeec
Q 022578 77 YDINGREA-------------DEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 77 i~~a~~~~-------------~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|+++|... ......++.++...+++.++.
T Consensus 259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 99998642 245667777774347776553
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=92.92 E-value=0.03 Score=49.60 Aligned_cols=30 Identities=17% Similarity=0.289 Sum_probs=27.0
Q ss_pred cCCcchHHHHHHHHHC--CCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~--g~~V~~~~r~~~~~ 32 (295)
|+|++|..++..|++. |++|++++|++++.
T Consensus 12 G~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~ 43 (467)
T 2q3e_A 12 GAGYVGGPTCSVIAHMCPEIRVTVVDVNESRI 43 (467)
T ss_dssp CCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence 5899999999999999 89999999987664
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=92.90 E-value=0.03 Score=47.11 Aligned_cols=91 Identities=16% Similarity=0.145 Sum_probs=54.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH-HHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~d~vi~~ 79 (295)
+||+|.+|...++.+...|.+|+++++++++... ..+. +.+.+ .|..+.+ ...+.+...++|+||++
T Consensus 157 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~---------~~~l--Ga~~v-~~~~~~~~~~~~~~~~~~~d~vid~ 224 (330)
T 1tt7_A 157 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADY---------LKQL--GASEV-ISREDVYDGTLKALSKQQWQGAVDP 224 (330)
T ss_dssp ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH---------HHHH--TCSEE-EEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCcEE-EECCCchHHHHHHhhcCCccEEEEC
Confidence 4889999999999998889999999998665211 1111 22222 1221110 00011122379999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+|. ......++.++...+++.++.
T Consensus 225 ~g~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 225 VGG--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp CCT--HHHHHHHTTEEEEEEEEECCC
T ss_pred CcH--HHHHHHHHhhcCCCEEEEEec
Confidence 985 345555565654457776653
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=92.89 E-value=0.13 Score=42.71 Aligned_cols=29 Identities=14% Similarity=0.059 Sum_probs=26.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|..++..|.+.|++|++.+|++++
T Consensus 14 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~ 42 (303)
T 3g0o_A 14 GLGSMGMGAARSCLRAGLSTWGADLNPQA 42 (303)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence 57999999999999999999999998765
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=92.87 E-value=0.13 Score=44.83 Aligned_cols=61 Identities=16% Similarity=0.122 Sum_probs=47.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+|.+|+.+++.+.+.|++|++++.++....... .-+.+..|+.|.+.+.++.+ ++|+|+.
T Consensus 42 G~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~a~--~~D~V~~ 102 (419)
T 4e4t_A 42 GGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV-------------ADRHLRAAYDDEAALAELAG--LCEAVST 102 (419)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH-------------SSEEECCCTTCHHHHHHHHH--HCSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhh-------------CCEEEECCcCCHHHHHHHHh--cCCEEEE
Confidence 4689999999999999999999987665422111 12456688999999999997 8999984
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=92.83 E-value=0.26 Score=42.15 Aligned_cols=90 Identities=9% Similarity=0.120 Sum_probs=58.9
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCC----C-hHHHHHhhhcCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----D-YDFVKSSLSAKGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~----~-~~~~~~~~~~~~~d 74 (295)
+|+ |.+|...++.+...|. +|+++++++++.... .+ -+.+.+ .|.. + .+.+.++... ++|
T Consensus 200 ~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a---------~~--lGa~~v-i~~~~~~~~~~~~i~~~~~g-g~D 265 (378)
T 3uko_A 200 FGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA---------KK--FGVNEF-VNPKDHDKPIQEVIVDLTDG-GVD 265 (378)
T ss_dssp ECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH---------HT--TTCCEE-ECGGGCSSCHHHHHHHHTTS-CBS
T ss_pred ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH---------HH--cCCcEE-EccccCchhHHHHHHHhcCC-CCC
Confidence 366 8899999998888898 899999888773211 11 233322 2332 1 2334444443 899
Q ss_pred EEEEcccCChhcHHHHHHhCCC-CCcEEEeec
Q 022578 75 VVYDINGREADEVEPILDALPN-LEQFIYCSS 105 (295)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~-~~~~i~~Ss 105 (295)
+||+++|. .......++.++. ..+++.++.
T Consensus 266 ~vid~~g~-~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 266 YSFECIGN-VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred EEEECCCC-HHHHHHHHHHhhccCCEEEEEcc
Confidence 99999884 3456667777774 478888764
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=92.80 E-value=0.098 Score=46.40 Aligned_cols=84 Identities=11% Similarity=-0.079 Sum_probs=59.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|++..... ....++++ .+++++++ ..|+|+.+.+.
T Consensus 284 G~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~-----------a~~~G~~~--------~~l~ell~--~aDiVi~~~~t 342 (494)
T 3d64_A 284 GYGDVGKGCAQSLRGLGATVWVTEIDPICALQ-----------AAMEGYRV--------VTMEYAAD--KADIFVTATGN 342 (494)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSCHHHHHH-----------HHTTTCEE--------CCHHHHTT--TCSEEEECSSS
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCChHhHHH-----------HHHcCCEe--------CCHHHHHh--cCCEEEECCCc
Confidence 47999999999999999999999998765211 01123432 13667888 99999988643
Q ss_pred ChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 83 EADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
...-....+..++....+|.+++..
T Consensus 343 ~~lI~~~~l~~MK~gAilINvgrg~ 367 (494)
T 3d64_A 343 YHVINHDHMKAMRHNAIVCNIGHFD 367 (494)
T ss_dssp SCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred ccccCHHHHhhCCCCcEEEEcCCCc
Confidence 2223456778888656888888744
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=92.79 E-value=0.12 Score=44.02 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=57.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|....... . ..++.. .+++++++ .+|+|+.+...
T Consensus 183 GlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~----------~--~~g~~~--------~~l~ell~--~aDvV~l~~Pl 240 (365)
T 4hy3_A 183 GFGDLGKALRRVLSGFRARIRVFDPWLPRSML----------E--ENGVEP--------ASLEDVLT--KSDFIFVVAAV 240 (365)
T ss_dssp CCSHHHHHHHHHHTTSCCEEEEECSSSCHHHH----------H--HTTCEE--------CCHHHHHH--SCSEEEECSCS
T ss_pred cCCcccHHHHHhhhhCCCEEEEECCCCCHHHH----------h--hcCeee--------CCHHHHHh--cCCEEEEcCcC
Confidence 57999999999999889999999987533110 0 123321 24667888 99999987654
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....+|.+|...+
T Consensus 241 t~~T~~li~~~~l~~mk~gailIN~aRG~~ 270 (365)
T 4hy3_A 241 TSENKRFLGAEAFSSMRRGAAFILLSRADV 270 (365)
T ss_dssp SCC---CCCHHHHHTSCTTCEEEECSCGGG
T ss_pred CHHHHhhcCHHHHhcCCCCcEEEECcCCch
Confidence 322 12456666776668888887664
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=92.76 E-value=0.049 Score=45.57 Aligned_cols=87 Identities=15% Similarity=0.159 Sum_probs=56.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||+|.+|...++.+...|.+|+++.+..+. +. ..+. +.+.+ .|..+.+.+.+.+. ++|+||++.
T Consensus 159 ~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~--~~--------~~~l--Ga~~~-i~~~~~~~~~~~~~--g~D~v~d~~ 223 (321)
T 3tqh_A 159 HAGAGGVGHLAIQLAKQKGTTVITTASKRNH--AF--------LKAL--GAEQC-INYHEEDFLLAIST--PVDAVIDLV 223 (321)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEECHHHH--HH--------HHHH--TCSEE-EETTTSCHHHHCCS--CEEEEEESS
T ss_pred EcCCcHHHHHHHHHHHHcCCEEEEEeccchH--HH--------HHHc--CCCEE-EeCCCcchhhhhcc--CCCEEEECC
Confidence 4889999999999999999999988754321 11 1111 23222 34555443556666 999999998
Q ss_pred cCChhcHHHHHHhCCCCCcEEEee
Q 022578 81 GREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
|.. .....+++++...+++.++
T Consensus 224 g~~--~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 224 GGD--VGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp CHH--HHHHHGGGEEEEEEEEECC
T ss_pred CcH--HHHHHHHhccCCCEEEEeC
Confidence 843 3355666666445777654
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=92.76 E-value=0.2 Score=41.42 Aligned_cols=30 Identities=20% Similarity=0.420 Sum_probs=26.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..++..|++.|++|++.+|+++..
T Consensus 22 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~ 51 (302)
T 1f0y_A 22 GGGLMGAGIAQVAAATGHTVVLVDQTEDIL 51 (302)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 469999999999999999999999987653
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=92.76 E-value=0.015 Score=49.66 Aligned_cols=90 Identities=12% Similarity=0.068 Sum_probs=55.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh-HHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~ 79 (295)
+|+ |.+|...++.+...|.+|+++++++.+... ..+. +.+.+ .|..+. +..+.+.. ++|+||++
T Consensus 186 ~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~v-~~~~~~~~~~~~~~~--~~D~vid~ 250 (360)
T 1piw_A 186 VGL-GGIGSMGTLISKAMGAETYVISRSSRKRED---------AMKM--GADHY-IATLEEGDWGEKYFD--TFDLIVVC 250 (360)
T ss_dssp ECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHH--TCSEE-EEGGGTSCHHHHSCS--CEEEEEEC
T ss_pred ECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---------HHHc--CCCEE-EcCcCchHHHHHhhc--CCCEEEEC
Confidence 477 999999999888889999999988776321 1111 22222 244333 33333333 89999999
Q ss_pred ccCC-hhcHHHHHHhCCCCCcEEEeec
Q 022578 80 NGRE-ADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 80 a~~~-~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
++.. .......++.++...+++.++.
T Consensus 251 ~g~~~~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 251 ASSLTDIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CSCSTTCCTTTGGGGEEEEEEEEECCC
T ss_pred CCCCcHHHHHHHHHHhcCCCEEEEecC
Confidence 8851 1233445555563347776654
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=92.74 E-value=0.095 Score=44.45 Aligned_cols=86 Identities=14% Similarity=0.047 Sum_probs=56.7
Q ss_pred cCCcchHHHHHHHH-HCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|.|.||+.+++.|. ..|++|++.+|++...... .+ .++.+. +++.++++ ++|+|+.+..
T Consensus 170 G~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~---------~~--~g~~~~-------~~l~ell~--~aDvVil~vp 229 (348)
T 2w2k_A 170 GLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE---------KA--LGAERV-------DSLEELAR--RSDCVSVSVP 229 (348)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH---------HH--HTCEEC-------SSHHHHHH--HCSEEEECCC
T ss_pred EECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH---------hh--cCcEEe-------CCHHHHhc--cCCEEEEeCC
Confidence 57999999999999 8899999999887542110 00 133321 13456777 8999998876
Q ss_pred CChh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 82 READ--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 82 ~~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
.+.. . ...++..++....+|.+|+..+
T Consensus 230 ~~~~t~~li~~~~l~~mk~gailin~srg~~ 260 (348)
T 2w2k_A 230 YMKLTHHLIDEAFFAAMKPGSRIVNTARGPV 260 (348)
T ss_dssp CSGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred CChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence 5432 1 2356667775557777776543
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=92.73 E-value=0.11 Score=44.92 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=58.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCC-------------Ch-------H
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-------------DY-------D 62 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-------------~~-------~ 62 (295)
|.|-+|..+++.+...|.+|++++|++..... ..+ .+.+++..|.. +. +
T Consensus 179 GaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~---------~~~--lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 247 (401)
T 1x13_A 179 GAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQ---------VQS--MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME 247 (401)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCGGGHHH---------HHH--TTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---------HHH--cCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence 36999999999999999999999998765211 111 13343322211 11 1
Q ss_pred HHHHhhhcCCCcEEEEcccCC---h-h-cHHHHHHhCCCCCcEEEeec
Q 022578 63 FVKSSLSAKGFDVVYDINGRE---A-D-EVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 63 ~~~~~~~~~~~d~vi~~a~~~---~-~-~~~~ll~~~~~~~~~i~~Ss 105 (295)
.+.+.+. +.|+||.+++.. . . -+...++.++....+|.++.
T Consensus 248 ~l~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 248 LFAAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence 4677777 899999996431 1 1 24677888885567887775
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=92.57 E-value=0.053 Score=46.15 Aligned_cols=88 Identities=15% Similarity=0.171 Sum_probs=57.5
Q ss_pred CCcCCcchHHH-HHHH-HHCCCe-EEEEecCCC---ccccCCCCCCchhhhhccCCeEEEEecCCCh--HHHHHhhhcCC
Q 022578 1 MGGTRFIGVFL-SRLL-VKEGHQ-VTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKG 72 (295)
Q Consensus 1 tGatG~iG~~l-~~~L-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~~~~~~~~~~~ 72 (295)
+|+ |.+|... ++.+ ...|.+ |++++++++ +... .. .-+.+.+ |..+. ..+.++ .. +
T Consensus 179 ~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~---------~~--~lGa~~v--~~~~~~~~~i~~~-~g-g 242 (357)
T 2b5w_A 179 LGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI---------IE--ELDATYV--DSRQTPVEDVPDV-YE-Q 242 (357)
T ss_dssp ECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH---------HH--HTTCEEE--ETTTSCGGGHHHH-SC-C
T ss_pred ECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH---------HH--HcCCccc--CCCccCHHHHHHh-CC-C
Confidence 477 9999999 8777 667987 999999877 4211 11 1345555 55432 224444 33 7
Q ss_pred CcEEEEcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 73 ~d~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+|+||+++|. .......++.++...+++.++.
T Consensus 243 ~Dvvid~~g~-~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 243 MDFIYEATGF-PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEEEEECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCC-hHHHHHHHHHHhcCCEEEEEeC
Confidence 9999999874 2345667777774457887764
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=92.57 E-value=0.12 Score=44.12 Aligned_cols=89 Identities=12% Similarity=0.103 Sum_probs=56.3
Q ss_pred CCcCCcchHHHHHHHHH-CCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi 77 (295)
+||+|.+|...++.+.. .|.+|+++++++++... ..+ -+.+.+. |..+ .+.+.+. ...++|+||
T Consensus 178 ~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~---------~~~--lGad~vi-~~~~~~~~~v~~~-~~~g~Dvvi 244 (363)
T 4dvj_A 178 VGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW---------VKS--LGAHHVI-DHSKPLAAEVAAL-GLGAPAFVF 244 (363)
T ss_dssp ESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH---------HHH--TTCSEEE-CTTSCHHHHHHTT-CSCCEEEEE
T ss_pred ECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH---------HHH--cCCCEEE-eCCCCHHHHHHHh-cCCCceEEE
Confidence 47899999998887776 58999999988765211 111 2333322 3332 1223322 324799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEe
Q 022578 78 DINGREADEVEPILDALPNLEQFIYC 103 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~ 103 (295)
+++|. .......+++++...+++.+
T Consensus 245 d~~g~-~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 245 STTHT-DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ECSCH-HHHHHHHHHHSCTTCEEEEC
T ss_pred ECCCc-hhhHHHHHHHhcCCCEEEEE
Confidence 99873 23456677888855688876
|
| >3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=92.55 E-value=0.19 Score=43.61 Aligned_cols=82 Identities=16% Similarity=0.053 Sum_probs=51.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++.+|.+.... .+.. ...+++++++ .+|+|+.+...
T Consensus 163 GlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~---------------~~~~-------~~~sl~ell~--~aDvV~lhvPl 218 (416)
T 3k5p_A 163 GYGNIGSQVGNLAESLGMTVRYYDTSDKLQY---------------GNVK-------PAASLDELLK--TSDVVSLHVPS 218 (416)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECTTCCCCB---------------TTBE-------ECSSHHHHHH--HCSEEEECCCC
T ss_pred eeCHHHHHHHHHHHHCCCEEEEECCcchhcc---------------cCcE-------ecCCHHHHHh--hCCEEEEeCCC
Confidence 5799999999999999999999998754311 1111 1134566777 78888766544
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....+|.+|...+
T Consensus 219 t~~T~~li~~~~l~~mk~gailIN~aRG~v 248 (416)
T 3k5p_A 219 SKSTSKLITEAKLRKMKKGAFLINNARGSD 248 (416)
T ss_dssp -----CCBCHHHHHHSCTTEEEEECSCTTS
T ss_pred CHHHhhhcCHHHHhhCCCCcEEEECCCChh
Confidence 221 12344555664456666665544
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=92.52 E-value=0.1 Score=43.24 Aligned_cols=66 Identities=8% Similarity=0.028 Sum_probs=44.4
Q ss_pred CcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhcc-CCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|+ |.+|+.++..|.+.|. +|++..|++++..+. .+.. .... +..+.+++.+.+. ++|+||++
T Consensus 148 Ga-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~l---------a~~~~~~~~----~~~~~~~~~~~~~--~aDivIn~ 211 (297)
T 2egg_A 148 GA-GGGARGIYFSLLSTAAERIDMANRTVEKAERL---------VREGDERRS----AYFSLAEAETRLA--EYDIIINT 211 (297)
T ss_dssp CC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHH---------HHHSCSSSC----CEECHHHHHHTGG--GCSEEEEC
T ss_pred Cc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH---------HHHhhhccC----ceeeHHHHHhhhc--cCCEEEEC
Confidence 54 7799999999999997 999999987663211 1111 1000 1113355667777 89999999
Q ss_pred ccCC
Q 022578 80 NGRE 83 (295)
Q Consensus 80 a~~~ 83 (295)
.+..
T Consensus 212 t~~~ 215 (297)
T 2egg_A 212 TSVG 215 (297)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 8754
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=92.50 E-value=0.097 Score=43.83 Aligned_cols=85 Identities=14% Similarity=0.088 Sum_probs=55.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|.|.||+.+++.|...|++|++.+| ++..... .. .++.+ . +++.++++ ++|+|+.+..
T Consensus 153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~----------~~--~g~~~--~-----~~l~ell~--~aDvVil~~p 211 (320)
T 1gdh_A 153 GFGSIGQALAKRAQGFDMDIDYFDTHRASSSDE----------AS--YQATF--H-----DSLDSLLS--VSQFFSLNAP 211 (320)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH----------HH--HTCEE--C-----SSHHHHHH--HCSEEEECCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEECCCCcChhhh----------hh--cCcEE--c-----CCHHHHHh--hCCEEEEecc
Confidence 5799999999999999999999998 7654110 00 13322 1 13556777 8999998876
Q ss_pred CChh--c--HHHHHHhCCCCCcEEEeecccc
Q 022578 82 READ--E--VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 82 ~~~~--~--~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
.+.+ . ....+..++....+|.+|+..+
T Consensus 212 ~~~~t~~~i~~~~l~~mk~gailIn~arg~~ 242 (320)
T 1gdh_A 212 STPETRYFFNKATIKSLPQGAIVVNTARGDL 242 (320)
T ss_dssp CCTTTTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred CchHHHhhcCHHHHhhCCCCcEEEECCCCcc
Confidence 5432 1 1335555665557787777543
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=92.49 E-value=0.046 Score=45.89 Aligned_cols=70 Identities=17% Similarity=0.175 Sum_probs=43.4
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+| +|.+|+.++..|+..|. +|.++++.+.+....... ......+..++.+..+| . +.++ ++|+||.
T Consensus 15 iG-aG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~D--L~~~~~~~~~~~i~~~~---~----~a~~--~aDiVvi 82 (326)
T 3vku_A 15 VG-DGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAID--LEDALPFTSPKKIYSAE---Y----SDAK--DADLVVI 82 (326)
T ss_dssp EC-CSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHH--HHTTGGGSCCCEEEECC---G----GGGT--TCSEEEE
T ss_pred EC-CCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhh--HhhhhhhcCCcEEEECc---H----HHhc--CCCEEEE
Confidence 36 49999999999999886 899999876542110000 00000111345544332 2 4566 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 83 ~ag~ 86 (326)
T 3vku_A 83 TAGA 86 (326)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9986
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=92.48 E-value=0.17 Score=41.23 Aligned_cols=85 Identities=15% Similarity=0.129 Sum_probs=46.2
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEE-ecCCCcc-ccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
+|++|.+|+.+++.+.+. ++++.+. +|+++.. ..... ++.....++ .-.++++++++ ++|+||
T Consensus 13 ~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~g-----el~g~~~gv-------~v~~dl~~ll~--~~DVVI 78 (272)
T 4f3y_A 13 AGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAG-----AFLGKQTGV-------ALTDDIERVCA--EADYLI 78 (272)
T ss_dssp SSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTT-----TTTTCCCSC-------BCBCCHHHHHH--HCSEEE
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHH-----HHhCCCCCc-------eecCCHHHHhc--CCCEEE
Confidence 488999999999999876 6777774 5554321 10000 000000122 11234555666 788888
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEE
Q 022578 78 DINGREADEVEPILDALP-NLEQFI 101 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i 101 (295)
+++. +..+...++.|. ...++|
T Consensus 79 DfT~--p~a~~~~~~~al~~G~~vV 101 (272)
T 4f3y_A 79 DFTL--PEGTLVHLDAALRHDVKLV 101 (272)
T ss_dssp ECSC--HHHHHHHHHHHHHHTCEEE
T ss_pred EcCC--HHHHHHHHHHHHHcCCCEE
Confidence 8863 444444444444 333444
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=92.45 E-value=0.15 Score=43.00 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=56.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.+++.|...|++|++.+|++.. ... .. .++.+ . ++.++++ ++|+|+.+...
T Consensus 157 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~---------~~--~g~~~-----~---~l~~~l~--~aDvVil~vp~ 214 (334)
T 2dbq_A 157 GLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVE---------RE--LNAEF-----K---PLEDLLR--ESDFVVLAVPL 214 (334)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHH---------HH--HCCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCcch-hhH---------hh--cCccc-----C---CHHHHHh--hCCEEEECCCC
Confidence 47999999999999999999999988765 110 00 12221 1 3456777 89999988766
Q ss_pred Chh--c--HHHHHHhCCCCCcEEEeeccc
Q 022578 83 EAD--E--VEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 83 ~~~--~--~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
+.. . ...++..++....+|.+|...
T Consensus 215 ~~~t~~~i~~~~~~~mk~~ailIn~srg~ 243 (334)
T 2dbq_A 215 TRETYHLINEERLKLMKKTAILINIARGK 243 (334)
T ss_dssp CTTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred ChHHHHhhCHHHHhcCCCCcEEEECCCCc
Confidence 432 1 145667777555777777544
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=92.43 E-value=0.088 Score=44.47 Aligned_cols=87 Identities=20% Similarity=0.177 Sum_probs=49.6
Q ss_pred CCcCCcchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.||||++|..|++.|.++.+ ++..+....+. ...+. ..+.+...-++.. ..++ ++|+||
T Consensus 7 vGatG~vG~el~~lL~~h~fp~~el~~~~s~~~a-G~~~~----------~~~~~~~~~~~~~-----~~~~--~~Dvvf 68 (344)
T 3tz6_A 7 VGATGQVGQVMRTLLDERDFPASAVRFFASARSQ-GRKLA----------FRGQEIEVEDAET-----ADPS--GLDIAL 68 (344)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTS-SCEEE----------ETTEEEEEEETTT-----SCCT--TCSEEE
T ss_pred ECCCChHHHHHHHHHHhCCCCceEEEEEECcccC-CCcee----------ecCCceEEEeCCH-----HHhc--cCCEEE
Confidence 49999999999999888754 45555433222 11110 1122333333322 2345 899999
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALP-NLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~ 107 (295)
.+.+. ...+..+..+. ...++|-.|+..
T Consensus 69 ~a~~~--~~s~~~a~~~~~~G~~vID~Sa~~ 97 (344)
T 3tz6_A 69 FSAGS--AMSKVQAPRFAAAGVTVIDNSSAW 97 (344)
T ss_dssp ECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred ECCCh--HHHHHHHHHHHhCCCEEEECCCcc
Confidence 99864 33444444433 334788888764
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=92.40 E-value=0.21 Score=40.19 Aligned_cols=72 Identities=14% Similarity=0.080 Sum_probs=48.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.+++.|.+.|++|.+.+|+++.... +.+.. ++.. ..+ +.++++ ++|+||-+..
T Consensus 10 G~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~---------~~~~~-g~~~----~~~---~~~~~~--~~D~Vi~~v~- 69 (259)
T 2ahr_A 10 GVGKMASAIIKGLKQTPHELIISGSSLERSKE---------IAEQL-ALPY----AMS---HQDLID--QVDLVILGIK- 69 (259)
T ss_dssp CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHH---------HHHHH-TCCB----CSS---HHHHHH--TCSEEEECSC-
T ss_pred CCCHHHHHHHHHHHhCCCeEEEECCCHHHHHH---------HHHHc-CCEe----eCC---HHHHHh--cCCEEEEEeC-
Confidence 47999999999999999999999988765221 11100 2211 122 445667 8999999986
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
......+++.++
T Consensus 70 -~~~~~~v~~~l~ 81 (259)
T 2ahr_A 70 -PQLFETVLKPLH 81 (259)
T ss_dssp -GGGHHHHHTTSC
T ss_pred -cHhHHHHHHHhc
Confidence 445666776665
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=92.39 E-value=0.035 Score=47.05 Aligned_cols=83 Identities=16% Similarity=0.175 Sum_probs=55.5
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|+ |.+|...++.+...|.+|+++++++++... ..+ .+.+.+. .+.+.+. + ++|+||++++
T Consensus 184 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~--lGa~~v~---~~~~~~~---~--~~D~vid~~g 243 (348)
T 3two_A 184 GF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQD---------ALS--MGVKHFY---TDPKQCK---E--ELDFIISTIP 243 (348)
T ss_dssp SC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHH---------HHH--TTCSEEE---SSGGGCC---S--CEEEEEECCC
T ss_pred CC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH---------HHh--cCCCeec---CCHHHHh---c--CCCEEEECCC
Confidence 65 999999999988899999999988776321 111 2333333 3443322 2 8999999988
Q ss_pred CChhcHHHHHHhCCCCCcEEEeec
Q 022578 82 READEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
.. ......++.++...+++.++.
T Consensus 244 ~~-~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 244 TH-YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred cH-HHHHHHHHHHhcCCEEEEECC
Confidence 53 355666777774457887654
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=92.38 E-value=0.72 Score=39.35 Aligned_cols=61 Identities=16% Similarity=0.086 Sum_probs=46.4
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+|..|+.+++.|.+.|++|++++.++......+ . -..+..|..|.+.+.++.+ ++|.|+..
T Consensus 9 ~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~------------~-~~~~~~~~~d~~~l~~~~~--~~d~v~~~ 69 (380)
T 3ax6_A 9 GGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV------------A-DEQIVAGFFDSERIEDLVK--GSDVTTYD 69 (380)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG------------S-SEEEECCTTCHHHHHHHHH--TCSEEEES
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh------------C-ceEEECCCCCHHHHHHHHh--cCCEEEec
Confidence 478899999999999999999987654421111 1 2356778899999988887 89999864
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=92.36 E-value=0.68 Score=39.45 Aligned_cols=90 Identities=8% Similarity=0.038 Sum_probs=56.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH---HHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~vi 77 (295)
+||+|.+|...++.+...|.+|+++. ++++.. ...+ -+.+.+ .|..+.+ .+.++.. .++|+||
T Consensus 171 ~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~---------~~~~--lGa~~v-i~~~~~~~~~~v~~~t~-g~~d~v~ 236 (371)
T 3gqv_A 171 YGGSTATATVTMQMLRLSGYIPIATC-SPHNFD---------LAKS--RGAEEV-FDYRAPNLAQTIRTYTK-NNLRYAL 236 (371)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH---------HHHH--TTCSEE-EETTSTTHHHHHHHHTT-TCCCEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH---------HHHH--cCCcEE-EECCCchHHHHHHHHcc-CCccEEE
Confidence 48889999999999999999999886 333311 1111 223322 2343332 3333332 3599999
Q ss_pred EcccCChhcHHHHHHhC-CCCCcEEEeec
Q 022578 78 DINGREADEVEPILDAL-PNLEQFIYCSS 105 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss 105 (295)
+++|. .......++++ +...+++.++.
T Consensus 237 d~~g~-~~~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 237 DCITN-VESTTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp ESSCS-HHHHHHHHHHSCTTCEEEEESSC
T ss_pred ECCCc-hHHHHHHHHHhhcCCCEEEEEec
Confidence 99884 34556677777 45568887764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 295 | ||||
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 3e-22 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-21 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 4e-20 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 9e-18 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 3e-15 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-13 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-13 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 4e-13 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 5e-13 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 2e-12 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 8e-11 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 1e-09 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-09 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 2e-09 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 5e-09 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 5e-09 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 2e-08 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-08 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 1e-07 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 1e-06 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 2e-06 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-05 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 2e-04 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 0.001 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 0.002 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 0.004 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 92.9 bits (230), Expect = 3e-22
Identities = 47/266 (17%), Positives = 85/266 (31%), Gaps = 33/266 (12%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G +L+ L+++G++V R + + Q+ + K GD D
Sbjct: 8 GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT 67
Query: 62 DFVKSSLSAKGFDVVYDINGREADEV---EP-------------ILDA-----LPNLEQF 100
+ L D VY++ V P +L+A L +F
Sbjct: 68 SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 127
Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
S++ +Y +P ET P+S + KL + ES G+ +
Sbjct: 128 YQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHE 187
Query: 156 GPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
P + + + G+ + GH KD + +L E+
Sbjct: 188 SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQP-- 245
Query: 211 QVFNISGEKYVTFDGLARACAKVTGL 236
+ F I+ + A G+
Sbjct: 246 EDFVIATGVQYSVRQFVEMAAAQLGI 271
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 89.1 bits (220), Expect = 4e-21
Identities = 46/257 (17%), Positives = 85/257 (33%), Gaps = 24/257 (9%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKD 60
GG FIG R L+ + + G ++ + ++ + GD +D
Sbjct: 7 GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD 66
Query: 61 YDFVKSS---------LSAKGFDVVYDINGREADEVEP-----ILDAL--PNLEQFIYCS 104
+ +A+ E +L + + ++ S
Sbjct: 67 AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVS 126
Query: 105 SAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPL- 158
+ VY D E+ ++P S + K ++ V + G++ R YGP
Sbjct: 127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186
Query: 159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
+ + F L G +P+ G G V + H D R VL +A ++++I G
Sbjct: 187 HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAG-EIYHIGGG 245
Query: 219 KYVTFDGLARACAKVTG 235
+T L G
Sbjct: 246 LELTNRELTGILLDSLG 262
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.3 bits (213), Expect = 4e-20
Identities = 50/265 (18%), Positives = 93/265 (35%), Gaps = 47/265 (17%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG F+G L+ L+ +GH+VT+ + + I H + ++
Sbjct: 8 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINH 56
Query: 62 DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------QFIYC 103
D V+ D +Y + PI N + +
Sbjct: 57 DVVEPLY--IEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLLA 113
Query: 104 SSAGVYLKSDLLPHCE-----TDTVDPKSR-HKGKLNTESVL----ESKGVNWTSLRPVY 153
S++ VY ++ P E + + P++ +GK E++ + +GV R
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173
Query: 154 IYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
+GP +N V F + G P+ + GSG Q +V DL V ++ + +
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-- 231
Query: 211 QVFNISGEKYVTFDGLARACAKVTG 235
N+ + T A+ + G
Sbjct: 232 SPVNLGNPEEHTILEFAQLIKNLVG 256
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 80.2 bits (197), Expect = 9e-18
Identities = 47/267 (17%), Positives = 78/267 (29%), Gaps = 52/267 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
GG FIG + R ++K V + A + L S+ F D
Sbjct: 7 GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF------EHADIC 60
Query: 60 DYDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNLE------------------ 98
D + D V + + P N+
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 99 ------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----------KGKLNTESVL-- 139
+F + S+ VY E P K +++ ++
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 140 --ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
+ G+ YGP ++ + G+P+PI G G Q+ +V+D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240
Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTF 223
RA V+ KA + +NI G
Sbjct: 241 RALHMVVTEGKAG-ETYNIGGHNEKKN 266
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 72.1 bits (175), Expect = 3e-15
Identities = 30/238 (12%), Positives = 74/238 (31%), Gaps = 16/238 (6%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +IG +++ + GH L R + + + F +S + G D+
Sbjct: 10 GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDH 67
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC 118
+ ++ K DVV G E + + + + S G + +
Sbjct: 68 ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 125
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
+ K++ + + ++G+ +T + G + +
Sbjct: 126 AKSVFEVKAKVRRAIE------AEGIPYTYVSSNCFAGY--FLRSLAQAGLTAPPRDKVV 177
Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKVTG 235
I G G +D+ ++ + + + + + ++ + L K
Sbjct: 178 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 235
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 67.5 bits (163), Expect = 2e-13
Identities = 22/240 (9%), Positives = 62/240 (25%), Gaps = 15/240 (6%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGT +IG + + GH + R + + ++ D+
Sbjct: 10 GGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---IDKVQMLLYFKQLGAKLIEASLDDH 66
Query: 62 DFVKSSLSAKGFDVV-----YDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
+ +L + + + S G+
Sbjct: 67 QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD-----PD 121
Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
E K +E+ + +T + G + + H +
Sbjct: 122 IMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDK 180
Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ-VFNISGEKYVTFDGLARACAKVTG 235
+ I G G D+ ++ + + + + ++ ++ + + +++
Sbjct: 181 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 240
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.3 bits (163), Expect = 2e-13
Identities = 40/266 (15%), Positives = 80/266 (30%), Gaps = 34/266 (12%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G T G +L+ L+++G++V R + ++ A + GD D
Sbjct: 8 GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD 67
Query: 61 YDFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDA--LPNLEQ 99
+ ++ + D++G + + L N +
Sbjct: 68 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 127
Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
F S++ +Y K +P ET P+S + KL ++ E+ + +
Sbjct: 128 FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNH 187
Query: 155 YGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
P + G+ GH KD A +L N++
Sbjct: 188 ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEP- 246
Query: 210 RQVFNISGEKYVTFDGLARACAKVTG 235
+ F I+ + + G
Sbjct: 247 -EDFVIATGEVHSVREFVEKSFLHIG 271
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 66.1 bits (160), Expect = 4e-13
Identities = 44/261 (16%), Positives = 79/261 (30%), Gaps = 27/261 (10%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G FIG L L+K +V + L + S ++GD ++
Sbjct: 23 GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 82
Query: 62 DFV-KSSLSAKGFDVVYDINGREADEVEPILDALPNLE---------------QFIYCSS 105
D + + +PI N++ F Y +S
Sbjct: 83 DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 142
Query: 106 AGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGP--- 157
+ Y LP E P S ++ +L + G + LR ++G
Sbjct: 143 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD 202
Query: 158 --LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFN 214
Y V + + G + I G G ++++ +A + A QV+N
Sbjct: 203 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYN 262
Query: 215 ISGEKYVTFDGLARACAKVTG 235
I+ + + L A
Sbjct: 263 IAVGGRTSLNQLFFALRDGLA 283
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.7 bits (156), Expect = 5e-13
Identities = 27/217 (12%), Positives = 63/217 (29%), Gaps = 22/217 (10%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G+ V+ G++VT+ R + + + P + + K
Sbjct: 10 GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQD 69
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
+ L D+ E +++ + C+SA + +P
Sbjct: 70 AVI--VLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR--- 124
Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
++ + VL G+ + ++ P + G +
Sbjct: 125 ---LQAVTDDHIRMHKVLRESGLKYVAVMPP-------------HIGDQPLTGA-YTVTL 167
Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
G +++ DL ++ L ++ S +
Sbjct: 168 DGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 64.3 bits (155), Expect = 2e-12
Identities = 32/239 (13%), Positives = 64/239 (26%), Gaps = 18/239 (7%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
G T G L R+ GH V K IA++L + + G +
Sbjct: 10 GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ---------GPLLN 60
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
+ + + I + + Y+ S + H
Sbjct: 61 NV---PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPI 179
K E+ + G+ T + P + + G
Sbjct: 118 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 177
Query: 180 PGSG-IQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTG 235
P I + L D+ A +Q+ + +K + ++ E + + A ++
Sbjct: 178 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETL-SPVQVCAAFSRALN 235
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 59.5 bits (143), Expect = 8e-11
Identities = 48/281 (17%), Positives = 85/281 (30%), Gaps = 72/281 (25%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G +G + R L + G + + + D
Sbjct: 9 GHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDS 43
Query: 62 DFVKSSLSAKGFDVVY----------DINGREADEVEPILDALPNL---------EQFIY 102
V +++ D VY N AD + + N+ + ++
Sbjct: 44 RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103
Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRH------KGKLNTESVLES----KGVNWTSLRPV 152
S+ +Y K P E++ + K+ + ES G ++ S+ P
Sbjct: 104 LGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 163
Query: 153 YIYGPL-NYNPVEEWFFHRLK---------AGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
+YGP N++P L + + GSG + + HV D+A A + V
Sbjct: 164 NLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 223
Query: 203 LGNEKASRQ--------VFNISGEKYVTFDGLARACAKVTG 235
+ N+ T LA+ AKV G
Sbjct: 224 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVG 264
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 56.2 bits (134), Expect = 1e-09
Identities = 40/264 (15%), Positives = 81/264 (30%), Gaps = 36/264 (13%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G +L++LL+++G++V ++ I + GD D
Sbjct: 7 GITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-----RWRLRELGIEGDIQYEDGDMADA 61
Query: 62 DFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDALPNLEQFIY 102
V+ ++ V ++G + + +F
Sbjct: 62 CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121
Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRHK-----GKLNTESVLESKGVNWTSLRPVYIYGP 157
S++ ++ E P+S + G T + ES G++ +S P
Sbjct: 122 ASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESP 181
Query: 158 LNYNPVEEW----FFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
L R+K G+ + G+ G D A +L +K
Sbjct: 182 LRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADD 239
Query: 213 FNISGEKYVTFDGLARACAKVTGL 236
+ ++ T + + + GL
Sbjct: 240 YVVATGVTTTVRDMCQIAFEHVGL 263
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 55.4 bits (132), Expect = 2e-09
Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 55/282 (19%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG+ +IG L++ GH V + K + + + ++GD
Sbjct: 7 GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-------FVEGDI 59
Query: 59 KDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPN---------------LEQF 100
++ + L D V + +P+ N ++ F
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119
Query: 101 IYCSSAGVYLKSDLLPHCETDTVDP-------KSRHKGKLNTESVLESKGVNWTSLRPVY 153
I+ SSA VY +P+ E+ ++ T+ + LR
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179
Query: 154 IYGPLNYNPVEEW----------FFHRLKAGR--PIPIPGS------GIQVTQLGHVKDL 195
G + E + ++ GR + I G+ G V HV DL
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239
Query: 196 ARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKVTG 235
A V + ++N+ + + A +K G
Sbjct: 240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACG 281
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 54.8 bits (130), Expect = 2e-09
Identities = 29/251 (11%), Positives = 60/251 (23%), Gaps = 27/251 (10%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G + G + + L + + ++ ++ G F + + +
Sbjct: 10 GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI 69
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDAL--------------PNLEQFIYCSSAG 107
D + SA + D +
Sbjct: 70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVV 129
Query: 108 VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
V P + + + K E L G +T +R + E
Sbjct: 130 VGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK------EGGV 183
Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY---VTFD 224
L + V D+A +Q L E+A + F++ +
Sbjct: 184 RELLVGKDDELLQTDTKTV----PRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTK 239
Query: 225 GLARACAKVTG 235
++VT
Sbjct: 240 DFKALFSQVTS 250
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 54.2 bits (129), Expect = 5e-09
Identities = 41/259 (15%), Positives = 78/259 (30%), Gaps = 28/259 (10%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G FI ++R L EGH V K + + + LK +
Sbjct: 22 GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-VTEGV 80
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPI-------LDALPNLEQFIYCSSAG------- 107
D V + + G N + + +++F Y SSA
Sbjct: 81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 140
Query: 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP----- 157
+ + L + +P+ KL TE + + G+ R IYGP
Sbjct: 141 LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 200
Query: 158 -LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
+ + + G G+Q + + +++ + R+ NI
Sbjct: 201 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT--KSDFREPVNIG 258
Query: 217 GEKYVTFDGLARACAKVTG 235
++ V+ + +A
Sbjct: 259 SDEMVSMNEMAEMVLSFEE 277
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 53.9 bits (128), Expect = 5e-09
Identities = 35/246 (14%), Positives = 63/246 (25%), Gaps = 33/246 (13%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
G T G +L+ L+ +G++V R + Q + + ++ L D D
Sbjct: 8 GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD 67
Query: 61 YDFVKSSLSAKGFDVVYDI----------------------NGREADEVEPILDALPNLE 98
++ + D VY++ E
Sbjct: 68 ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT 127
Query: 99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRPVY 153
Y + + S P ET P+S + T + E+ G+ +
Sbjct: 128 VKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFN 187
Query: 154 IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
P + + G+ G D A +L EK
Sbjct: 188 HESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP 247
Query: 209 SRQVFN 214
V
Sbjct: 248 DDYVVA 253
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 52.4 bits (124), Expect = 2e-08
Identities = 46/291 (15%), Positives = 88/291 (30%), Gaps = 65/291 (22%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
GG F+G L+ + +G + L +G L + EF + GD
Sbjct: 7 GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEF---------VHGD 57
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEV---EPILDALPNLE---------------- 98
++ + V ++ D + + G+ A P +D N+
Sbjct: 58 IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117
Query: 99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL------------------- 139
IY S+ VY + + ET+T + + L
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177
Query: 140 --ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------RLKAGRPIPIPGSGIQVTQ 188
G+N R +YG + ++ + + +P I G+G QV
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237
Query: 189 LGHVKDLARAFVQVLGNEKASR---QVFNISGEKYVTFDGLARACAKVTGL 236
+ H +D+ + L N R + ++ L + +
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI 288
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 52.3 bits (124), Expect = 2e-08
Identities = 45/267 (16%), Positives = 73/267 (27%), Gaps = 37/267 (13%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GG FIG + V + K A G A ++ + GD D
Sbjct: 9 GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA----GNKANLEAILGDRVELVVGDIADA 64
Query: 62 DFVKSSLSAKGFDVVY-DINGREADEVEPILDALPNLEQFIYC--------------SSA 106
+ V + V Y + + +P N S+
Sbjct: 65 ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124
Query: 107 GVY----LKSDLLPHC--------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
VY L+ DL H +P S + K ++ ++ S GV T
Sbjct: 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATIS 184
Query: 150 RPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
YGP + + AG + G G V H D + +L +
Sbjct: 185 NCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM 244
Query: 209 SRQVFNISGEKYVTFDGLARACAKVTG 235
+ + + L K+
Sbjct: 245 GETYLIGADGEKNNKEVLELILEKMGQ 271
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.0 bits (118), Expect = 1e-07
Identities = 45/290 (15%), Positives = 82/290 (28%), Gaps = 63/290 (21%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
GG +IG L++ G+ + + +L + I + D
Sbjct: 8 GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-------HHIPFYEVDL 60
Query: 59 KDYDFVKSSLSAKGFDVV------------------YDINGREADEVEPILDALPNLEQF 100
D ++ D V Y N V L N+ +F
Sbjct: 61 CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120
Query: 101 IYCSSAGVYLKS----DLLPHCETDTVDPKSRH-KGKLNTESVLES------KGVNWTSL 149
++ SSA VY + +++P E + P + + K E++L K + L
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180
Query: 150 RPVYIYGPLNYNPVEEWFFHR------------LKAGRPIPIPGSGIQVTQLGHVKDLAR 197
R G + E + + I G ++D
Sbjct: 181 RYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240
Query: 198 AFVQVLGNEKASR------------QVFNISGEKYVTFDGLARACAKVTG 235
G+ A + + +N+ K T + A K +G
Sbjct: 241 VVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG 290
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (108), Expect = 1e-06
Identities = 31/230 (13%), Positives = 64/230 (27%), Gaps = 20/230 (8%)
Query: 2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
G + G L + ++++G +VTL R K ++ +QE +F + +
Sbjct: 21 GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG 80
Query: 60 DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE 119
G E L + E L S
Sbjct: 81 HDVGFCC------LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134
Query: 120 TDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
++ + + + + V E K ++ RP + + EW +
Sbjct: 135 SNFLYLQVKGE---VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF-----FGS 186
Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
V + RA + + +Q+ + + L +A
Sbjct: 187 LPDSWASGHSVPVVTVVRAMLNNV-VRPRDKQMELLENKAIHD---LGKA 232
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.5 bits (106), Expect = 2e-06
Identities = 26/212 (12%), Positives = 52/212 (24%), Gaps = 20/212 (9%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T G L ++ E + + +A+ ++ +
Sbjct: 9 GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGP------------LAELL 56
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
+ S+ + I ++E +D L G +
Sbjct: 57 PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 116
Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
+++ E T RP ++GP + E + I
Sbjct: 117 KSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPI-----ARILP 171
Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
DLARA ++ E +
Sbjct: 172 GKYHGI---EACDLARALWRLALEEGKGVRFV 200
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.9 bits (102), Expect = 1e-05
Identities = 44/281 (15%), Positives = 80/281 (28%), Gaps = 47/281 (16%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRK 59
GG +IG L++ G+ + A ES + E + + + + D
Sbjct: 9 GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68
Query: 60 DYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
D ++ F V + +P+ NL I L
Sbjct: 69 DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLV 128
Query: 117 HCETDTVDPKSRH-----------------KGKLNTESVLES-----KGVNWTSLRPVYI 154
+ TV ++ K K E ++ K N LR
Sbjct: 129 FSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNP 188
Query: 155 YGPLNYNPVEEW----------FFHRLKAGRPIPIP--------GSGIQVTQLGHVKDLA 196
G + E + ++ GR + G V HV DLA
Sbjct: 189 TGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLA 248
Query: 197 RAFV--QVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
+ + E+ +++N+ + + +A K +G
Sbjct: 249 KGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG 289
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 39.8 bits (91), Expect = 2e-04
Identities = 25/277 (9%), Positives = 63/277 (22%), Gaps = 50/277 (18%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G F+ + L++ G++V R + +A + F + + D
Sbjct: 18 GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAV---VEDMLKQ 74
Query: 62 DFVKSSLSAKGFDV----VYDINGREADEVEPILDALPNLEQFIYC------------SS 105
+ V + + + V P + N + +
Sbjct: 75 GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134
Query: 106 AGVYLKSDLLPHCETDTVDPKSRH-------------------KGKLNTESVLESKGVNW 146
+ + K ++ + K E
Sbjct: 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN 194
Query: 147 TSLRPVY----------IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
+ I+ P + + L G P + D+
Sbjct: 195 KPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA-LMPPQYYVSAVDIG 253
Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKV 233
+ L + R+ + + ++ + K+
Sbjct: 254 LLHLGCLVLPQIERRRVYGTAGTF-DWNTVLATFRKL 289
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 37.5 bits (85), Expect = 0.001
Identities = 26/236 (11%), Positives = 66/236 (27%), Gaps = 16/236 (6%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G +G + + L + +V I + K +
Sbjct: 8 GANGQLGREIQKQLKGKNVEVIPTDVQDLDIT---------NVLAVNKFFNEKKPNVVIN 58
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
+++ A + + S+ V+ P E D
Sbjct: 59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFD 118
Query: 122 T-VDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
+ K KL E+ +++ + +R ++YG N + +
Sbjct: 119 EVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHD 178
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236
G + + + V + ++ + F+ + + ++ A ++TG+
Sbjct: 179 QVGTPTSTVDLAR------VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGI 228
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 36.8 bits (83), Expect = 0.002
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 6/63 (9%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T F G +LS L G V ++ + E A + + GD +D
Sbjct: 15 GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQ 68
Query: 62 DFV 64
+ +
Sbjct: 69 NKL 71
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 36.1 bits (81), Expect = 0.004
Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 23/79 (29%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G T +G L R L G+ + L K GD +
Sbjct: 7 GKTGQVGWELQRSLAPVGNLIALDVHSK-----------------------EFCGDFSNP 43
Query: 62 DFVKSSLSAKGFDVVYDIN 80
V ++ DV+ +
Sbjct: 44 KGVAETVRKLRPDVIVNAA 62
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 295 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.97 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.97 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.96 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.96 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.96 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.95 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.95 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.94 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.94 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.92 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.91 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.9 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.9 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.86 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.62 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.61 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.6 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.59 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.59 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.59 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.59 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.59 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.59 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.58 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.58 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.58 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.58 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.57 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.57 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.57 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.57 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.56 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.56 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.55 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.54 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.54 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.54 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.54 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.53 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.51 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.5 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.5 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.5 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.49 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.49 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.49 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.48 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.48 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.47 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.45 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.44 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.44 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.44 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.42 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.41 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.4 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.4 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.39 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.36 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.34 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.34 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.31 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.31 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.25 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.24 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.23 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.18 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.16 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.15 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.14 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.13 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.12 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.12 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.09 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.03 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.02 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.01 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.8 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.79 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.74 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.56 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.93 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.62 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.42 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.42 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.37 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.31 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.15 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.88 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 96.82 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.77 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.71 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.7 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.68 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.66 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.64 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.46 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.45 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.45 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.44 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.39 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.17 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.11 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.06 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.05 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.95 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 95.92 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 95.58 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 95.57 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 95.5 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.09 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.06 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 95.04 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 94.94 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 94.91 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 94.85 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 94.8 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 94.79 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 94.78 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 94.77 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.75 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.71 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 94.7 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.66 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 94.65 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.63 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.62 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 94.41 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 94.4 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 94.27 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 94.25 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 94.19 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.11 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 94.02 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 94.02 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 93.98 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 93.85 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 93.82 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 93.73 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 93.56 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 93.54 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 93.42 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 93.07 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 93.03 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 92.62 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 92.6 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 92.52 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 92.5 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 92.34 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 92.21 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 92.1 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 92.09 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 91.77 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 91.71 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 91.52 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 91.49 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 91.48 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 91.23 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 91.18 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 91.03 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 91.03 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 90.97 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 90.97 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 90.79 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 90.74 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.72 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 90.7 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 90.48 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 90.41 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 90.18 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 89.88 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 89.85 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 89.83 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 89.67 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 89.5 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 89.26 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 89.23 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 89.1 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 89.04 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 88.73 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 88.67 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 88.55 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 88.45 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 88.4 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 88.26 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 87.71 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 87.47 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 86.93 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 86.91 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 86.85 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 86.81 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 86.69 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 86.62 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 86.59 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 86.57 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 86.23 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 86.01 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 85.66 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 85.47 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 85.18 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 85.17 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 84.88 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 84.72 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 84.25 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 84.11 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 84.05 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 84.02 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.79 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 83.09 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 83.05 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 83.01 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 82.64 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 81.73 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 80.61 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-37 Score=267.95 Aligned_cols=235 Identities=19% Similarity=0.165 Sum_probs=184.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++|++|++++|.++...................+++++++|++|.+++.+++++.++|+|||+|
T Consensus 7 TGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~a 86 (357)
T d1db3a_ 7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLG 86 (357)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEECC
T ss_pred eCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEee
Confidence 79999999999999999999999999976532111100000111222368999999999999999999988889999998
Q ss_pred cC----------------ChhcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHH
Q 022578 81 GR----------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV 138 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~ 138 (295)
+. |+.++.+|+++|+ +.+||||+||.+|||.....+++|+++..|.+.| .+|+++|++
T Consensus 87 a~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~ 166 (357)
T d1db3a_ 87 AMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWI 166 (357)
T ss_dssp CCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred cccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence 75 4567999999986 4457999999999998878899999999998766 999999998
Q ss_pred hh----hcCCcEEEeccCeeecCCCCCc----hHHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 139 LE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 139 ~~----~~~~~~~i~R~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
++ ..+++++++||+.+|||+.... .+...+.....++. ...+|++++.++++|++|+|++++.+++.+ .
T Consensus 167 ~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~--~ 244 (357)
T d1db3a_ 167 TVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE--Q 244 (357)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS--S
T ss_pred HHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC--C
Confidence 74 4689999999999999975332 23334444455544 445688999999999999999999998764 4
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++.||+++++.+|+.|+++.+.+.+|..
T Consensus 245 ~~~yni~sg~~~s~~~~~~~~~~~~g~~ 272 (357)
T d1db3a_ 245 PEDFVIATGVQYSVRQFVEMAAAQLGIK 272 (357)
T ss_dssp CCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred CCeEEECCCCceehHHHHHHHHHHhCCc
Confidence 6799999999999999999999999864
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=8.1e-37 Score=259.59 Aligned_cols=229 Identities=20% Similarity=0.308 Sum_probs=194.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEE------EEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVT------LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~------~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d 74 (295)
||||||||++|+++|+++|++|+ .+++........ .........+++++.+|+.+......... .+|
T Consensus 6 tG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d 78 (322)
T d1r6da_ 6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-----NLAPVDADPRLRFVHGDIRDAGLLARELR--GVD 78 (322)
T ss_dssp ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG-----GGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCC
T ss_pred ECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh-----HhhhhhcCCCeEEEEeccccchhhhcccc--ccc
Confidence 79999999999999999998554 443332111000 00011123579999999999999888887 999
Q ss_pred EEEEcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHH
Q 022578 75 VVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT 135 (295)
Q Consensus 75 ~vi~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~ 135 (295)
.|+|+|+. |..++.+++++|. ++++|||+||.++||.....+++|+++..|.+.| .+|..+
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 158 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGS 158 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999876 4567899999987 8899999999999999888899999999998876 999999
Q ss_pred HHHh----hhcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 022578 136 ESVL----ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210 (295)
Q Consensus 136 E~~~----~~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 210 (295)
|.++ ++++++++++||+.+|||++. ..+++.++..+..++++.+++++++.++++|++|+|+++..+++++.. +
T Consensus 159 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~-~ 237 (322)
T d1r6da_ 159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA-G 237 (322)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT-T
T ss_pred HHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCC-C
Confidence 9987 456999999999999999874 467888999999999999889999999999999999999999988654 6
Q ss_pred ceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++||+++++.+++.|+++.+.+.+|.+
T Consensus 238 ~~~ni~~~~~~s~~e~~~~i~~~~~~~ 264 (322)
T d1r6da_ 238 EIYHIGGGLELTNRELTGILLDSLGAD 264 (322)
T ss_dssp CEEEECCCCEEEHHHHHHHHHHHHTCC
T ss_pred CeeEEeecccchhHHHHHHHHHHhCCC
Confidence 799999999999999999999999987
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-37 Score=262.27 Aligned_cols=222 Identities=20% Similarity=0.290 Sum_probs=179.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|++++|........+.. .....++++...|. ++.++. ++|+|||+|
T Consensus 7 tG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~------~~~~~~~d~~~~~~-----~~~~~~--~~d~VihlA 73 (312)
T d2b69a1 7 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH------WIGHENFELINHDV-----VEPLYI--EVDQIYHLA 73 (312)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG------GTTCTTEEEEECCT-----TSCCCC--CCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH------hcCCCceEEEehHH-----HHHHHc--CCCEEEECc
Confidence 79999999999999999999999998755442222210 01123455555554 344555 899999999
Q ss_pred cC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCC-----CCCCCCccc-hhhHHHHH
Q 022578 81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~-----~~~~p~~~~-~~k~~~E~ 137 (295)
+. |+.++.+|+++++ ...++||+||.+|||.....+.+|+ ++..|.+.| .+|.++|.
T Consensus 74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~ 153 (312)
T d2b69a1 74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET 153 (312)
T ss_dssp SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence 85 4557899999998 3348999999999998766666654 355677666 99999999
Q ss_pred Hh----hhcCCcEEEeccCeeecCCCC---CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 022578 138 VL----ESKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210 (295)
Q Consensus 138 ~~----~~~~~~~~i~R~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~ 210 (295)
++ +.++++++++||+.+|||+.. ..+++.++..+..|+++.+++++.+.++++|++|++++++.+++.. .+
T Consensus 154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~--~~ 231 (312)
T d2b69a1 154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN--VS 231 (312)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS--CC
T ss_pred HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc--cC
Confidence 88 456999999999999999863 3467888899999999998899999999999999999999998764 35
Q ss_pred ceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 211 QVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 211 ~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+.||+++++.+++.++++.+++.+|.+
T Consensus 232 ~~~n~~~~~~~~~~~~~~~i~~~~~~~ 258 (312)
T d2b69a1 232 SPVNLGNPEEHTILEFAQLIKNLVGSG 258 (312)
T ss_dssp SCEEESCCCEEEHHHHHHHHHHHHTCC
T ss_pred CceEecCCcccchhhHHHHHHHHhCCC
Confidence 699999999999999999999999987
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=9.5e-35 Score=248.67 Aligned_cols=235 Identities=20% Similarity=0.184 Sum_probs=197.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++||+|++++|......................+++++.+|+.|...+..... .++.|+|++
T Consensus 22 TG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~~v~~~~ 99 (341)
T d1sb8a_ 22 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQA 99 (341)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred ecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccccccccc
Confidence 799999999999999999999999998554311110000000001223579999999999999888888 999999998
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh-
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE- 140 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~- 140 (295)
+. |+.++.+++++|. ++++|||+||..+||.....+.+|+++..|.+.| .+|.++|++++
T Consensus 100 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 179 (341)
T d1sb8a_ 100 ALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV 179 (341)
T ss_dssp SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred ccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHH
Confidence 75 4678999999998 8889999999999999888899999999998877 99999999874
Q ss_pred ---hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC-CCCc
Q 022578 141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQ 211 (295)
Q Consensus 141 ---~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~-~~~~ 211 (295)
..+++++++||+.+|||+.. ..++..++..+..|+++.+++++++.++++|++|++.++..++..+. ..++
T Consensus 180 ~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~ 259 (341)
T d1sb8a_ 180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQ 259 (341)
T ss_dssp HHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred HHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccce
Confidence 46899999999999999752 34677888889999999888999999999999999999999887643 4567
Q ss_pred eEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 212 VFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 212 ~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+|++++++.+|+.|+++.+.+.++.+
T Consensus 260 ~~~~~~~~~~si~~i~~~i~~~~~~~ 285 (341)
T d1sb8a_ 260 VYNIAVGGRTSLNQLFFALRDGLAEN 285 (341)
T ss_dssp EEEESCSCCEEHHHHHHHHHHHHHHT
T ss_pred eeeecccccchHHHHHHHHHHHhccc
Confidence 99999999999999999999999865
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=4.9e-34 Score=245.82 Aligned_cols=229 Identities=20% Similarity=0.227 Sum_probs=185.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEE-EecCCCcc-ccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|||+||||++|+++|++.|++|++ +++..... ...+.. .....+++++.+|++|++.+.++++..++|+|||
T Consensus 6 tG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih 79 (361)
T d1kewa_ 6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD------ISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT------TTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHh------hhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 799999999999999999997544 55433221 111110 1112589999999999999999999888999999
Q ss_pred cccC----------------ChhcHHHHHHhCC-----------CCCcEEEeeccccccCCCCCC----------CCCCC
Q 022578 79 INGR----------------EADEVEPILDALP-----------NLEQFIYCSSAGVYLKSDLLP----------HCETD 121 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~-----------~~~~~i~~Ss~~v~~~~~~~~----------~~e~~ 121 (295)
||+. |..++.+++++|. +.++|||+||..+||.....+ ..|..
T Consensus 80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~ 159 (361)
T d1kewa_ 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence 9985 3456888998875 245899999999998654322 33555
Q ss_pred CCCCCccc-hhhHHHHHHhh----hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 122 ~~~p~~~~-~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
+..|.+.| .+|.++|.+++ +.+++++++||+.+|||++. ..+++.++..+..|+++.++++|++.++++|++|+
T Consensus 160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~ 239 (361)
T d1kewa_ 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (361)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence 66777755 99999999984 47999999999999999874 45778889999999999888999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 196 a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
|+++..+++++.. +++||+++++.+++.|+++.+.+.++.
T Consensus 240 a~ai~~~~~~~~~-~~~~Ni~s~~~~s~~~~~~~i~~~~~~ 279 (361)
T d1kewa_ 240 ARALHMVVTEGKA-GETYNIGGHNEKKNLDVVFTICDLLDE 279 (361)
T ss_dssp HHHHHHHHHHCCT-TCEEEECCCCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC-CCeEEECCCCCcchHHHHhHhhhhccc
Confidence 9999999987644 679999999999999999999988753
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3e-33 Score=238.96 Aligned_cols=232 Identities=23% Similarity=0.303 Sum_probs=182.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||||||||++|++.|+++|++|++++|.......... .. .....+++++++|++|.+.+.++++..++|+|||+
T Consensus 6 tG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHH-----HHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHH-----HHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 7999999999999999999999999875544221110 01 11125799999999999999999998899999999
Q ss_pred ccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC-CCCCCccc-hhhHHHHHHh
Q 022578 80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~-~~~p~~~~-~~k~~~E~~~ 139 (295)
|+. |+.++.+++++|+ ++++||++||.++|+.....+..|.. ...|...| .+|..+|+++
T Consensus 81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~ 160 (338)
T d1udca_ 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence 975 5668999999998 89999999999999877666555554 34566555 9999999988
Q ss_pred hh-----cCCcEEEeccCeeecCCCC-----------CchHHHHHHHHHcC-CCcccCC------CCCceeeeeeHHHHH
Q 022578 140 ES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLA 196 (295)
Q Consensus 140 ~~-----~~~~~~i~R~~~i~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a 196 (295)
.+ .+++++++|++++|||+.. ..++..++.....+ .++.+.| ++.+.++++|++|++
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~ 240 (338)
T d1udca_ 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240 (338)
T ss_dssp HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehh
Confidence 42 5799999999999998532 23455555555443 3444443 478889999999999
Q ss_pred HHHHHHhcC--CCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 197 RAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 197 ~~i~~~~~~--~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.++..+... ....+++||+++++.+|+.|+++.+.+.+|.+
T Consensus 241 ~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~ 283 (338)
T d1udca_ 241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSC
T ss_pred hhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCC
Confidence 888876653 33446799999999999999999999999977
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-32 Score=233.56 Aligned_cols=235 Identities=17% Similarity=0.139 Sum_probs=187.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccC-CCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||||||||++|+++|+++||+|++++|.++..... +.............+++++.+|++|.+.+..++.+.++++|+|+
T Consensus 7 TG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~ 86 (347)
T d1t2aa_ 7 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL 86 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccceeeee
Confidence 79999999999999999999999999986542111 10000000111125789999999999999999998899999999
Q ss_pred ccC----------------ChhcHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 80 NGR----------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
++. |+.++.+++++++ +.++|||+||.+|||.....+++|+++..|.+.| .+|.++|+
T Consensus 87 ~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~ 166 (347)
T d1t2aa_ 87 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW 166 (347)
T ss_dssp CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred eeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 875 4557889998875 3458999999999998888899999999998866 99999999
Q ss_pred Hhh----hcCCcEEEeccCeeecCCCCCch-----HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 022578 138 VLE----SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 138 ~~~----~~~~~~~i~R~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
++. ..+++++++||+.+|||+..... ...++.....+.+...+|++++.++++|++|+++++..++.+..
T Consensus 167 ~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~- 245 (347)
T d1t2aa_ 167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE- 245 (347)
T ss_dssp HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred HHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC-
Confidence 874 46899999999999999753222 22233444456667777899999999999999999999998754
Q ss_pred CCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 209 SRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 209 ~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.+.|+++.....++.+..+.+...+++.
T Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (347)
T d1t2aa_ 246 -PEDFVIATGEVHSVREFVEKSFLHIGKT 273 (347)
T ss_dssp -CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred -Cccceeccccccccchhhhhhhhhhcce
Confidence 3578898988999999999999999986
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.8e-32 Score=231.79 Aligned_cols=225 Identities=20% Similarity=0.222 Sum_probs=184.1
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHH-hhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~-~~~~~~~d~vi~ 78 (295)
||||||||++|+++|+++| ++|+++++.......... .++++++.+|+++.+.+.+ .++ ++|+|||
T Consensus 6 TG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----------~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih 73 (342)
T d2blla1 6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP 73 (342)
T ss_dssp ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----------CCCeEEEECccCChHHHHHHHHh--CCCcccc
Confidence 7999999999999999998 589999987665333332 2689999999998766655 555 8999999
Q ss_pred cccC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCC-------CCCCCccc-hhhH
Q 022578 79 INGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-------TVDPKSRH-KGKL 133 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-------~~~p~~~~-~~k~ 133 (295)
+|+. |+.++.++++++. ...+++++||..+|+........|.. ...|...| .+|.
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~ 153 (342)
T d2blla1 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ 153 (342)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred ccccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhccc
Confidence 9986 4567999999988 66688899999999987665554433 23444545 8999
Q ss_pred HHHHHhh----hcCCcEEEeccCeeecCCCC---------CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 134 ~~E~~~~----~~~~~~~i~R~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
.+|+++. +.+++++++|++.+|||+.. ......++..+..|+++.+++++++.++++|++|+|+++.
T Consensus 154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~ 233 (342)
T d2blla1 154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY 233 (342)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence 9999884 46899999999999998632 2246778888889999998999999999999999999999
Q ss_pred HHhcCC--CCCCceEEecCCc-ccCHHHHHHHHHHHhCCC
Q 022578 201 QVLGNE--KASRQVFNISGEK-YVTFDGLARACAKVTGLL 237 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~-~~t~~e~~~~i~~~~g~~ 237 (295)
.+++++ ...+++||+++++ .+|+.|+++.+.+.+|..
T Consensus 234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~ 273 (342)
T d2blla1 234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH 273 (342)
T ss_dssp HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTC
T ss_pred eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCC
Confidence 999874 3457899998765 589999999999999876
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=7.3e-32 Score=228.62 Aligned_cols=230 Identities=18% Similarity=0.147 Sum_probs=188.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++||+|++++|..+..... ........++++++.+|++|.+.+.+.+.+..+++++|++
T Consensus 6 tG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 6 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRW-----RLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCH-----HHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHH-----HHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 79999999999999999999999999987552210 0001112357999999999999999999988899999998
Q ss_pred cC----------------ChhcHHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh
Q 022578 81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE 140 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~ 140 (295)
+. |+.++.+++++++ + .++|++.||..+|+.....+.+|+.+..|.+.| .+|.++|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 160 (321)
T d1rpna_ 81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160 (321)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence 75 4567899999987 4 457889999999988888888999999888877 99999999874
Q ss_pred ----hcCCcEEEeccCeeecCCCCCc----hHHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCc
Q 022578 141 ----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211 (295)
Q Consensus 141 ----~~~~~~~i~R~~~i~g~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~ 211 (295)
+.+++++++||+.+|||..... .+..++.....++ +....|++++.++++|++|+|+++..+++++. ++
T Consensus 161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~~ 238 (321)
T d1rpna_ 161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--AD 238 (321)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CC
T ss_pred HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--cC
Confidence 4789999999999999975322 2233344444444 44456899999999999999999999998764 46
Q ss_pred eEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 212 VFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 212 ~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.||+++++..++.++++.+.+.+|.+
T Consensus 239 ~~ni~~~~~~s~~~~~~~~~~~~~~~ 264 (321)
T d1rpna_ 239 DYVVATGVTTTVRDMCQIAFEHVGLD 264 (321)
T ss_dssp CEEECCSCEEEHHHHHHHHHHTTTCC
T ss_pred CceecccccceehhhhHHHHHHhCCC
Confidence 89999999999999999999999976
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=7.1e-32 Score=231.13 Aligned_cols=229 Identities=17% Similarity=0.165 Sum_probs=187.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||||||||++|+++|+++|++|.++.++......... .+. ....+++++.+|++|.+.+..++. +++.|+|+
T Consensus 8 TGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~-----~~~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~~~ 80 (346)
T d1oc2a_ 8 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA-----NLEAILGDRVELVVGDIADAELVDKLAA--KADAIVHY 80 (346)
T ss_dssp ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG-----GTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred eCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHH-----HHHHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhhhh
Confidence 7999999999999999999987777665322111100 001 112589999999999999999999 99999999
Q ss_pred ccC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCC------------CCCCCCCCCCCCCCccc-
Q 022578 80 NGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKS------------DLLPHCETDTVDPKSRH- 129 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~------------~~~~~~e~~~~~p~~~~- 129 (295)
|+. |..++.++++++. ...++|++||..+||.. .....+|.++..|.+.|
T Consensus 81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~ 160 (346)
T d1oc2a_ 81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS 160 (346)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence 875 4567999999988 44699999999999742 12345667777888766
Q ss_pred hhhHHHHHHhh----hcCCcEEEeccCeeecCCCC-CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 130 ~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
.+|.++|.+++ ..+++++++||+.+|||+.. ...+..++.....+.++.+++++++.++++|++|+|++++.++.
T Consensus 161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~ 240 (346)
T d1oc2a_ 161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 240 (346)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHh
Confidence 99999998874 56899999999999999864 45677777788888888888999999999999999999999988
Q ss_pred CCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 205 NEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 205 ~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++.. ++.|++++++..++.++++.+.+.++.+
T Consensus 241 ~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 272 (346)
T d1oc2a_ 241 KGRM-GETYLIGADGEKNNKEVLELILEKMGQP 272 (346)
T ss_dssp HCCT-TCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred hccc-CccccccccccccchHHHHHHHHHhCCC
Confidence 7654 6799999999999999999999999876
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=6.1e-32 Score=233.02 Aligned_cols=222 Identities=18% Similarity=0.240 Sum_probs=181.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++||+|++++|......... ....++..+|+.+.+.+..+++ ++|+|||++
T Consensus 21 TGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a 87 (363)
T d2c5aa1 21 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA 87 (363)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------cccCcEEEeechhHHHHHHHhh--cCCeEeecc
Confidence 799999999999999999999999987765522111 2467899999999999999998 999999998
Q ss_pred cC-----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCC-------CCCCCCCCccc-hhhH
Q 022578 81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC-------ETDTVDPKSRH-KGKL 133 (295)
Q Consensus 81 ~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~-------e~~~~~p~~~~-~~k~ 133 (295)
+. |+.++.++++++. ++++||++||..+|+.....+.+ |..+..|.+.| .+|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~ 167 (363)
T d2c5aa1 88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL 167 (363)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence 65 4557899999987 89999999999999876554443 33455677655 9999
Q ss_pred HHHHHhh----hcCCcEEEeccCeeecCCCC-----C-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 134 NTESVLE----SKGVNWTSLRPVYIYGPLNY-----N-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 134 ~~E~~~~----~~~~~~~i~R~~~i~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
++|++++ ..+++++++||+.+|||++. . ..................+++|.+.++++|++|+++++..++
T Consensus 168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~ 247 (363)
T d2c5aa1 168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 247 (363)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence 9999874 46999999999999999752 1 222333344445566667789999999999999999999998
Q ss_pred cCCCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 204 ~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+.+ .++.||+++++.+++.|+++.+.+.+|.+
T Consensus 248 ~~~--~~~~~ni~~~~~~s~~~l~~~i~~~~g~~ 279 (363)
T d2c5aa1 248 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKK 279 (363)
T ss_dssp HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCC
T ss_pred hCC--CCCeEEEecCCcccHHHHHHHHHHHhCCC
Confidence 764 46799999999999999999999999987
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.7e-31 Score=228.80 Aligned_cols=233 Identities=19% Similarity=0.223 Sum_probs=179.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++|++|+++++.......... ........+++++++|++|.+.+..+++..++|+|||+|
T Consensus 7 TGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA 82 (347)
T d1z45a2 7 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA----RLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA 82 (347)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH----HHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred eCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH----hHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence 7999999999999999999999999865433111000 000111357999999999999999999988999999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCC----CCCCCCCCCCCCCccc-hhhHHHHH
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTES 137 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~----~~~~~e~~~~~p~~~~-~~k~~~E~ 137 (295)
+. |..++.+++++|+ ++++||++||..+||... ..+++|+.+..|.+.| .+|.++|+
T Consensus 83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 162 (347)
T d1z45a2 83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIEN 162 (347)
T ss_dssp SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred ccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHH
Confidence 86 4567899999998 889999999999998643 3567788888888766 99999999
Q ss_pred Hhh------hcCCcEEEeccCeeecCCC-----------CCchHHHHHHHHH-cCCCcccCCCC------CceeeeeeHH
Q 022578 138 VLE------SKGVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPGSG------IQVTQLGHVK 193 (295)
Q Consensus 138 ~~~------~~~~~~~i~R~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~i~~~ 193 (295)
+++ ..+++++++||+.+||+.. ...++..+...+. .++++.++|++ ...++++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~ 242 (347)
T d1z45a2 163 ILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV 242 (347)
T ss_dssp HHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHH
T ss_pred HHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeee
Confidence 874 2578999999999999742 1224444444443 34456555544 4567889999
Q ss_pred HHHHHHHHHhcC------CCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 194 DLARAFVQVLGN------EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 194 D~a~~i~~~~~~------~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|.+.+++.+++. ....+++||+++++++|+.|+++.+.+.+|.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~ 292 (347)
T d1z45a2 243 DLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGID 292 (347)
T ss_dssp HHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred cccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCC
Confidence 999988887652 22346789999999999999999999999987
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=1e-30 Score=223.09 Aligned_cols=234 Identities=16% Similarity=0.107 Sum_probs=177.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCcccc-CCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||||||||++|+++|+++||+|++++|..+.... ................++++.+|+++.+.+.+.++..++|+|||+
T Consensus 7 TGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~ 86 (339)
T d1n7ha_ 7 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL 86 (339)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred eCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccchhhhc
Confidence 7999999999999999999999999997653211 111100000011124688999999999999999987899999999
Q ss_pred ccC----------------ChhcHHHHHHhCC-------CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHH
Q 022578 80 NGR----------------EADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT 135 (295)
Q Consensus 80 a~~----------------~~~~~~~ll~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~ 135 (295)
|+. |..++.+++++++ ...++++.||..+|+.. ..+++|+.+..|.+.| .+|..+
T Consensus 87 Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~~~Y~~sK~~~ 165 (339)
T d1n7ha_ 87 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPRSPYAASKCAA 165 (339)
T ss_dssp CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCCCCCSHHHHHHHHH
T ss_pred cccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCCCCcchhhHHHHHH
Confidence 986 2345777777764 34567888887777554 4568899999998876 999999
Q ss_pred HHHh----hhcCCcEEEeccCeeecCCCCCch-HHHH----HHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 136 ESVL----ESKGVNWTSLRPVYIYGPLNYNPV-EEWF----FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 136 E~~~----~~~~~~~~i~R~~~i~g~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
|+++ +..+++++++||+.+|||+..... ...+ ........+..+.|++.+.++++|++|+|+++..++.++
T Consensus 166 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~ 245 (339)
T d1n7ha_ 166 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE 245 (339)
T ss_dssp HHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence 9987 457999999999999999754322 2222 222333444555688999999999999999999999986
Q ss_pred CCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 207 KASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 207 ~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
.. ..+++..+...+..++++.+.+.++..
T Consensus 246 ~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~ 274 (339)
T d1n7ha_ 246 KP--DDYVVATEEGHTVEEFLDVSFGYLGLN 274 (339)
T ss_dssp SC--CEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred CC--Cccccccccccccchhhhhhhhhhhcc
Confidence 53 467777788899999999999999976
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=5.9e-30 Score=222.79 Aligned_cols=234 Identities=17% Similarity=0.171 Sum_probs=175.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecC---CCc----cccCCCCCCchh-h----hhccCCeEEEEecCCChHHHHHhh
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG---KAP----IAQQLPGESDQE-F----AEFSSKILHLKGDRKDYDFVKSSL 68 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~---~~~----~~~~~~~~~~~~-~----~~~~~~v~~~~~D~~~~~~~~~~~ 68 (295)
||||||||++|+++|+++||+|++++.- ... ............ + .....+++++.+|++|.+.+.+++
T Consensus 7 TGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~ 86 (393)
T d1i24a_ 7 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF 86 (393)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHH
Confidence 7999999999999999999999998621 000 000000000000 0 111257999999999999999999
Q ss_pred hcCCCcEEEEcccC-------------------ChhcHHHHHHhCC--CC-CcEEEeeccccccCCCCCCCC--------
Q 022578 69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHC-------- 118 (295)
Q Consensus 69 ~~~~~d~vi~~a~~-------------------~~~~~~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~-------- 118 (295)
++.++|+|||+|+. |+.++.+++++|+ +. .+++++||..+|+.... +..
T Consensus 87 ~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~~~~~~~ 165 (393)
T d1i24a_ 87 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITH 165 (393)
T ss_dssp HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSEEEEEE
T ss_pred HhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccccccccccc
Confidence 98889999999974 4567999999987 44 46778888888765432 111
Q ss_pred ------CCCCCCCCccc-hhhHHHHHHh----hhcCCcEEEeccCeeecCCCC------------------CchHHHHHH
Q 022578 119 ------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH 169 (295)
Q Consensus 119 ------e~~~~~p~~~~-~~k~~~E~~~----~~~~~~~~i~R~~~i~g~~~~------------------~~~~~~~~~ 169 (295)
+..+..|.+.| .+|..+|.++ ++.+++++++||+.+|||+.. ...+..++.
T Consensus 166 ~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 245 (393)
T d1i24a_ 166 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV 245 (393)
T ss_dssp TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred cccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhH
Confidence 11245666655 9999999987 467999999999999998742 224677888
Q ss_pred HHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEe-cCCcccCHHHHHHHHHHHhC
Q 022578 170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKYVTFDGLARACAKVTG 235 (295)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i-~~~~~~t~~e~~~~i~~~~g 235 (295)
....++++.++|++.+.++++|++|+++++..++.+....+..+.+ .+++.+++.|+++.+.+..+
T Consensus 246 ~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~ 312 (393)
T d1i24a_ 246 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGS 312 (393)
T ss_dssp HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred HhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999887665544333 34577999999999988764
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.5e-30 Score=219.23 Aligned_cols=237 Identities=18% Similarity=0.191 Sum_probs=178.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc-hhhh-hccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-QEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
||||||||++|+++|+++|++|+++++.............. ..+. ....+++++.+|++|.+.+.+++.+.++++|+|
T Consensus 8 TG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h 87 (346)
T d1ek6a_ 8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH 87 (346)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccc
Confidence 79999999999999999999999998754432211111000 0111 113679999999999999999999888999999
Q ss_pred cccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCC-CCCCCc-cchhhHHHHHH
Q 022578 79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKS-RHKGKLNTESV 138 (295)
Q Consensus 79 ~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~-~~~p~~-~~~~k~~~E~~ 138 (295)
+|+. |+.++.+++++++ ++++|||+||+.+|+........+.. ...+.+ |..+|..+|+.
T Consensus 88 ~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~ 167 (346)
T d1ek6a_ 88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167 (346)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred cccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHH
Confidence 9986 4567899999988 89999999999999876544433333 334554 45999999987
Q ss_pred hhh-----cCCcEEEeccCeeecCCCC-----------CchHHHHHHHHH-cCCCcccC------CCCCceeeeeeHHHH
Q 022578 139 LES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVKDL 195 (295)
Q Consensus 139 ~~~-----~~~~~~i~R~~~i~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~~~D~ 195 (295)
+++ .+++.+++||+.+|||... ..++..++.... .+.++.++ .++.+.++++|++|+
T Consensus 168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~ 247 (346)
T d1ek6a_ 168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL 247 (346)
T ss_dssp HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred HHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEec
Confidence 742 5899999999999998531 223444444333 34444432 357788999999999
Q ss_pred HHHHHHHhcC--CCCCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 196 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 196 a~~i~~~~~~--~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
|.++..++.. ....+++||+++++.+++.|+++.+.+.+|.+
T Consensus 248 a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~ 291 (346)
T d1ek6a_ 248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291 (346)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC
T ss_pred cchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 9998887543 33456799999999999999999999999987
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.96 E-value=1.4e-29 Score=210.28 Aligned_cols=216 Identities=19% Similarity=0.185 Sum_probs=183.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|.++||+|++++|.. +|+.|.+++++++++.++|+|||++
T Consensus 7 tGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------~D~~d~~~~~~~l~~~~~d~vih~a 60 (281)
T d1vl0a_ 7 TGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------LDITNVLAVNKFFNEKKPNVVINCA 60 (281)
T ss_dssp ESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------ccCCCHHHHHHHHHHcCCCEEEeec
Confidence 79999999999999999999999988742 3788999999999988999999998
Q ss_pred cCC----------------hhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhhc
Q 022578 81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (295)
Q Consensus 81 ~~~----------------~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~ 142 (295)
+.. .....++++.+. ...+++++||..+|+.....+..|.++..|...+ ..|..+|+++++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~ 140 (281)
T d1vl0a_ 61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL 140 (281)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence 863 223445555555 6678999999999999888899999998888876 9999999999999
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccC
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~~~~~t 222 (295)
+.+++++||+++|||+. ++...++..+..+..+.+.+ ++.++++|++|+++++..++++.. .+.||+++++.+|
T Consensus 141 ~~~~~i~R~~~vyG~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~~~~~s 214 (281)
T d1vl0a_ 141 NPKYYIVRTAWLYGDGN--NFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN--YGTFHCTCKGICS 214 (281)
T ss_dssp CSSEEEEEECSEESSSS--CHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC--CEEEECCCBSCEE
T ss_pred CCCccccceeEEeCCCc--ccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc--cCceeEeCCCccc
Confidence 99999999999999965 45667778888888776654 488999999999999999998754 3599999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcccccCCccc
Q 022578 223 FDGLARACAKVTGLLDFRSLNLCTTTPKSL 252 (295)
Q Consensus 223 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~ 252 (295)
+.|+++.+++.+|++ .++.+.+.+.+
T Consensus 215 ~~e~~~~i~~~~g~~----~~i~~i~~~~~ 240 (281)
T d1vl0a_ 215 WYDFAVEIFRLTGID----VKVTPCTTEEF 240 (281)
T ss_dssp HHHHHHHHHHHHCCC----CEEEEECSTTS
T ss_pred hHHHHHHHHHHhCCC----ceEEeccHHHc
Confidence 999999999999998 55655554443
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.96 E-value=7.8e-30 Score=217.27 Aligned_cols=232 Identities=20% Similarity=0.287 Sum_probs=175.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++|++|+++++-....... .........+++++.+|+++.+.+.+++++.++|+|||+|
T Consensus 6 TGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~-----~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a 80 (338)
T d1orra_ 6 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATD-----NLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 80 (338)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchh-----HHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence 79999999999999999999999987533221100 0011122368999999999999999999977889999999
Q ss_pred cC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCC-CCCC----------------CCCCCCCCC
Q 022578 81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLP----------------HCETDTVDP 125 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~-~~~~----------------~~e~~~~~p 125 (295)
+. |+.++.+|++++. +++++|+.||.++++.. ...+ ..+..+..|
T Consensus 81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T d1orra_ 81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF 160 (338)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence 86 5668999999988 77777777776655432 2211 223334455
Q ss_pred Cccc-hhhHHHHHHh----hhcCCcEEEeccCeeecCCCC----CchHHHHHHHHH-----cCCCcccCCCCCceeeeee
Q 022578 126 KSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLK-----AGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 126 ~~~~-~~k~~~E~~~----~~~~~~~~i~R~~~i~g~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~ 191 (295)
.+.| ..|...|.++ +..+....++|++.+|++... ...+..++..+. .++++.++|++++.++++|
T Consensus 161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~ 240 (338)
T d1orra_ 161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence 5554 8888888875 467899999999999987642 233455554443 3677888899999999999
Q ss_pred HHHHHHHHHHHhcCC-CCCCceEEecC--CcccCHHHHHHHHHHHhCCC
Q 022578 192 VKDLARAFVQVLGNE-KASRQVFNISG--EKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~-~~~~~~~~i~~--~~~~t~~e~~~~i~~~~g~~ 237 (295)
++|++++++.++.+. ...+++|++.. +..+++.|+++.+.+.++.+
T Consensus 241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~ 289 (338)
T d1orra_ 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNID 289 (338)
T ss_dssp HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCC
T ss_pred ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCC
Confidence 999999999998764 34678999855 45689999999999999987
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=8.2e-30 Score=215.36 Aligned_cols=212 Identities=20% Similarity=0.283 Sum_probs=172.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++|+.|+++++..+ .|+.+.+.+..+++..++|.|+|++
T Consensus 8 TG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~d~v~~~a 62 (315)
T d1e6ua_ 8 AGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------------------LNLLDSRAVHDFFASERIDQVYLAA 62 (315)
T ss_dssp ETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EcCCcHHHHHHHHHHHHCcCEEEEecCchh-------------------------ccccCHHHHHHHHhhcCCCEEEEcc
Confidence 799999999999999999999987654321 3788999999999888899999998
Q ss_pred cC-----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCC-----CCc-cchhhHHH
Q 022578 81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-----PKS-RHKGKLNT 135 (295)
Q Consensus 81 ~~-----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~-----p~~-~~~~k~~~ 135 (295)
+. |+.++.+++++|. ++++|||+||.++||.....+++|+.+.. |.+ |..+|.++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~ 142 (315)
T d1e6ua_ 63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG 142 (315)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence 54 4567899999987 88999999999999988777787765432 223 45999999
Q ss_pred HHHhh----hcCCcEEEeccCeeecCCCCC-----ch-----HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 136 ESVLE----SKGVNWTSLRPVYIYGPLNYN-----PV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 136 E~~~~----~~~~~~~i~R~~~i~g~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
|++++ +.+++++++||+.+|||+... .. ..........+..+.+.+++...++++|++|+++++..
T Consensus 143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~ 222 (315)
T d1e6ua_ 143 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH 222 (315)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHH
Confidence 99874 569999999999999997531 11 12223444557777888899999999999999999999
Q ss_pred HhcCCC--------CCCceEEecCCcccCHHHHHHHHHHHhCCC
Q 022578 202 VLGNEK--------ASRQVFNISGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 202 ~~~~~~--------~~~~~~~i~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
++.+.. .....++++.+...++.++++.+.+.+|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~ 266 (315)
T d1e6ua_ 223 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK 266 (315)
T ss_dssp HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred hhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCC
Confidence 886532 234689999999999999999999999987
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.96 E-value=8.1e-29 Score=214.80 Aligned_cols=237 Identities=21% Similarity=0.265 Sum_probs=176.2
Q ss_pred CCcCCcchHHHHHHHHH-CCCeEEEEecCCCccccCCCCCCchhh------------hhccCCeEEEEecCCChHHHHHh
Q 022578 1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEF------------AEFSSKILHLKGDRKDYDFVKSS 67 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~------------~~~~~~v~~~~~D~~~~~~~~~~ 67 (295)
|||+||||++|+++|++ .||+|+++++-................ ......+.++.+|++|.+.++++
T Consensus 8 TG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~ 87 (383)
T d1gy8a_ 8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV 87 (383)
T ss_dssp ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred eCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhh
Confidence 79999999999999986 689999997522211000000000000 11124688999999999999999
Q ss_pred hhcC-CCcEEEEcccC----------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCC-------CCCCCCCC
Q 022578 68 LSAK-GFDVVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD 121 (295)
Q Consensus 68 ~~~~-~~d~vi~~a~~----------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~-------~~~~~e~~ 121 (295)
++.. ++|+|||+|+. |..++.+++++++ +.++++++||..+|+... ..++.|+.
T Consensus 88 ~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~ 167 (383)
T d1gy8a_ 88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA 167 (383)
T ss_dssp HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred hhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccccccccc
Confidence 9764 56999999986 4557899999988 889999999999987543 34566777
Q ss_pred CCCCCccc-hhhHHHHHHhh----hcCCcEEEeccCeeecCCCCC----------chHHHHHHHHH--------------
Q 022578 122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLK-------------- 172 (295)
Q Consensus 122 ~~~p~~~~-~~k~~~E~~~~----~~~~~~~i~R~~~i~g~~~~~----------~~~~~~~~~~~-------------- 172 (295)
+..|.+.| .+|..+|++++ .++++++++||+.+|||+... ..++.++..+.
T Consensus 168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~ 247 (383)
T d1gy8a_ 168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED 247 (383)
T ss_dssp CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhh
Confidence 78888865 99999999884 469999999999999997632 22333333222
Q ss_pred --cCCCcccC------CCCCceeeeeeHHHHHHHHHHHhcC--------CCCCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 173 --AGRPIPIP------GSGIQVTQLGHVKDLARAFVQVLGN--------EKASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 173 --~~~~~~~~------~~~~~~~~~i~~~D~a~~i~~~~~~--------~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
.+.++.++ ++|.+.++++|++|+|++++.+++. ....+++||+++++.+++.|+++.+.+.+|.
T Consensus 248 ~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~ 327 (383)
T d1gy8a_ 248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH 327 (383)
T ss_dssp ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred hhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCC
Confidence 23333332 3578899999999999999998863 1223578999999999999999999999998
Q ss_pred C
Q 022578 237 L 237 (295)
Q Consensus 237 ~ 237 (295)
+
T Consensus 328 ~ 328 (383)
T d1gy8a_ 328 P 328 (383)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.7e-28 Score=192.49 Aligned_cols=184 Identities=18% Similarity=0.251 Sum_probs=149.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||||++|++++++|+++||+|++++|++++...... .+++++.+|++|.+++.++++ ++|+|||++
T Consensus 9 ~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~-----------~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~ 75 (205)
T d1hdoa_ 9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----------RPAHVVVGDVLQAADVDKTVA--GQDAVIVLL 75 (205)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-----------CCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccc-----------cccccccccccchhhHHHHhc--CCCEEEEEe
Confidence 6999999999999999999999999999888544332 579999999999999999999 999999998
Q ss_pred cCC---------hhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEe
Q 022578 81 GRE---------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL 149 (295)
Q Consensus 81 ~~~---------~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~ 149 (295)
|.. ..++++++++++ +++|||++||.+++++....+ .....++..|..+|+++++.+++|+++
T Consensus 76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~------~~~~~~~~~~~~~e~~l~~~~~~~tii 149 (205)
T d1hdoa_ 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP------PRLQAVTDDHIRMHKVLRESGLKYVAV 149 (205)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC------GGGHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc------ccccccchHHHHHHHHHHhcCCceEEE
Confidence 762 346889999998 999999999999876543321 111124578889999999999999999
Q ss_pred ccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecC
Q 022578 150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217 (295)
Q Consensus 150 R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~ 217 (295)
||+.+++.... +. ..+..+++....+++.+|+|++++.++++++..|+.+.+..
T Consensus 150 rp~~~~~~~~~-------------~~-~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~ 203 (205)
T d1hdoa_ 150 MPPHIGDQPLT-------------GA-YTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH 203 (205)
T ss_dssp CCSEEECCCCC-------------SC-CEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred ecceecCCCCc-------------cc-EEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence 99999975331 22 22234566777899999999999999999887788877754
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.95 E-value=2.4e-28 Score=208.69 Aligned_cols=229 Identities=14% Similarity=0.066 Sum_probs=169.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+||||++|+++|+++|++|+++.|+.++... +.+ .............+.+|++|.+.+..++. ++|+|+|++
T Consensus 17 TG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~-~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v~~~a 91 (342)
T d1y1pa1 17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-LQK--RWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAHIA 91 (342)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHH--HHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHH-HHH--hhhccccccccEEEeccccchhhhhhhcc--cchhhhhhc
Confidence 7999999999999999999999999998655211 000 00001111234567899999999999998 999999998
Q ss_pred cC-------------ChhcHHHHHHhCC---CCCcEEEeeccccccCCC----CCC----------------CCCCCCCC
Q 022578 81 GR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLP----------------HCETDTVD 124 (295)
Q Consensus 81 ~~-------------~~~~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~----~~~----------------~~e~~~~~ 124 (295)
+. |+.++.+++++|. ++++|||+||..+++... +.. ..|+.+..
T Consensus 92 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~ 171 (342)
T d1y1pa1 92 SVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK 171 (342)
T ss_dssp CCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred ccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence 86 5568999999875 689999999976543211 111 22333444
Q ss_pred CCc-cchhhHHHHHHhh----h--cCCcEEEeccCeeecCCC----CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 022578 125 PKS-RHKGKLNTESVLE----S--KGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 125 p~~-~~~~k~~~E~~~~----~--~~~~~~i~R~~~i~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (295)
|.. |..+|..+|+++. + .+++++++||+.+|||.. .......++..+..|+..... .+++.++++|++
T Consensus 172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~ 250 (342)
T d1y1pa1 172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAV 250 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHH
T ss_pred CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeHH
Confidence 444 4499999998653 3 357889999999999863 234566777778788765443 355678999999
Q ss_pred HHHHHHHHHhcCCCCCCceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 194 D~a~~i~~~~~~~~~~~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
|+|++++.++.++...+ .|++++++.+++.|+++.+.+.++.
T Consensus 251 Dva~~~i~~l~~~~~~g-~~~~~~~~~~t~~eia~~i~k~~p~ 292 (342)
T d1y1pa1 251 DIGLLHLGCLVLPQIER-RRVYGTAGTFDWNTVLATFRKLYPS 292 (342)
T ss_dssp HHHHHHHHHHHCTTCCS-CEEEECCEEECHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhhcCccccc-eEEEEcCCceEHHHHHHHHHHHcCC
Confidence 99999999998876655 5668888899999999999999743
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.95 E-value=6.5e-28 Score=202.85 Aligned_cols=233 Identities=13% Similarity=0.091 Sum_probs=175.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||||||||++|+++|+++||+|++++|++....... ...+ .....+++++.+|+.|.+.+...+. ++++++++
T Consensus 9 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~~~~ 82 (312)
T d1qyda_ 9 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA 82 (312)
T ss_dssp ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhH----HHHHhhhccCCcEEEEeecccchhhhhhcc--Ccchhhhh
Confidence 799999999999999999999999999876522110 0001 1113579999999999999999999 99999998
Q ss_pred ccC-----ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc-chhhHHHHHHhhhcCCcEEEecc
Q 022578 80 NGR-----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRP 151 (295)
Q Consensus 80 a~~-----~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~-~~~k~~~E~~~~~~~~~~~i~R~ 151 (295)
++. +..+..++++++. +..++++.||.+++... +..+..|... +..+..++++.+..+++++++||
T Consensus 83 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~ 156 (312)
T d1qyda_ 83 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS 156 (312)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEEC
T ss_pred hhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cccccchhhhhhHHHHHHHHhhcccccceEEecc
Confidence 765 5567888888876 77788888887765332 2223333333 48888889998999999999999
Q ss_pred CeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceE-EecCCcccCHHHHHHHH
Q 022578 152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF-NISGEKYVTFDGLARAC 230 (295)
Q Consensus 152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~-~i~~~~~~t~~e~~~~i 230 (295)
+.+||+..... ...+......++.+.+++++++.+++++++|+|++++.++.++...++.+ ++++++.+|++|+++.+
T Consensus 157 ~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~ 235 (312)
T d1qyda_ 157 NMFAGYFAGSL-AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIW 235 (312)
T ss_dssp CEEHHHHTTTS-SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHH
T ss_pred ceeecCCccch-hhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHH
Confidence 99999743211 11111112235556777899999999999999999999999887767665 55556789999999999
Q ss_pred HHHhCCCCCCCCcccccCCc
Q 022578 231 AKVTGLLDFRSLNLCTTTPK 250 (295)
Q Consensus 231 ~~~~g~~~~~~~~~~~~~~~ 250 (295)
++.+|.+ ..+...+..
T Consensus 236 ~~~~g~~----~~~~~i~~~ 251 (312)
T d1qyda_ 236 ERLSEQN----LDKIYISSQ 251 (312)
T ss_dssp HHHHTCC----CEECCBCSH
T ss_pred HHHHCCC----CeEEECCHH
Confidence 9999988 555555543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.94 E-value=1.6e-26 Score=198.16 Aligned_cols=230 Identities=15% Similarity=0.182 Sum_probs=175.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|+++|++|++++|...+....+ +.....++++++.+|++|++.+.++++...+|+|+|++
T Consensus 14 TG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~------~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a 87 (356)
T d1rkxa_ 14 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 87 (356)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH------HHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHH------hhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence 799999999999999999999999999887643211 11111357999999999999999999988999999999
Q ss_pred cC----------------ChhcHHHHHHhCC--C-CCcEEEeeccccccC-CCCCCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~--~-~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
+. |+.++.++++++. + ...+++.|+..++.. ....+..|+.+..|.+.+ .+|...|..+
T Consensus 88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~ 167 (356)
T d1rkxa_ 88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT 167 (356)
T ss_dssp SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence 86 4557899999987 4 445555555544443 334556677777777765 8888888665
Q ss_pred h-------------hcCCcEEEeccCeeecCCCC--CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 140 E-------------SKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 140 ~-------------~~~~~~~i~R~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
+ ..++.++++||+.+|||++. ..++..+++....+.++ +.+.+++.++++|++|+++++..++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~D~~~a~~~~~~ 246 (356)
T d1rkxa_ 168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPLSGYLLLAQ 246 (356)
T ss_dssp HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred hHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCce-EEeeccccccccccccccchhhhhhh
Confidence 2 35789999999999999863 45667777777666655 45788899999999999999998887
Q ss_pred CCCCC----CceEEe--cCCcccCHHHHHHHHHHHhCCC
Q 022578 205 NEKAS----RQVFNI--SGEKYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 205 ~~~~~----~~~~~i--~~~~~~t~~e~~~~i~~~~g~~ 237 (295)
+.... +...+. ..+..+++.++++.+.+.++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 285 (356)
T d1rkxa_ 247 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEG 285 (356)
T ss_dssp HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTT
T ss_pred hhcccccccccccccccccccccccchhhhhhHHHhCCC
Confidence 53222 223333 3346789999999999999976
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.94 E-value=2e-27 Score=198.96 Aligned_cols=234 Identities=15% Similarity=0.176 Sum_probs=176.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
||||||||++++++|+++||+|++++|++........ ...+. ....+++++.+|+.+.+.+...++ +++.|+|+
T Consensus 9 tGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~vi~~ 83 (307)
T d1qyca_ 9 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK---AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVIST 83 (307)
T ss_dssp ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH---HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEEC
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH---HHHHHhhccCCcEEEEeecccchhhhhhhh--hceeeeec
Confidence 7999999999999999999999999998766321100 00011 112579999999999999999999 99999999
Q ss_pred ccC-ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc-chhhHHHHHHhhhcCCcEEEeccCeee
Q 022578 80 NGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIY 155 (295)
Q Consensus 80 a~~-~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~-~~~k~~~E~~~~~~~~~~~i~R~~~i~ 155 (295)
++. +..+..++++++. +.+++++.|+...... +.....+... +..+...+.++++.+.+++++||+++|
T Consensus 84 ~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~ 156 (307)
T d1qyca_ 84 VGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD-------NVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFA 156 (307)
T ss_dssp CCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTT-------SCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEH
T ss_pred ccccccchhhHHHHHHHHhccccceeeeccccccc-------cccccccccccccccccccchhhccCCCceecccceec
Confidence 865 5667888898877 8889999888654321 2222222223 467778888889999999999999999
Q ss_pred cCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCce-EEecCCcccCHHHHHHHHHHHh
Q 022578 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKVT 234 (295)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~-~~i~~~~~~t~~e~~~~i~~~~ 234 (295)
|++... +..+.....++....+++++++.++++|++|+|++++.++.++...++. |++++++.+|+.|+++.+.+++
T Consensus 157 g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~ 234 (307)
T d1qyca_ 157 GYFLRS--LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI 234 (307)
T ss_dssp HHHTTT--TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHT
T ss_pred CCCccc--hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHH
Confidence 975421 1122223334556667788999999999999999999999987766665 4556678899999999999999
Q ss_pred CCCCCCCCcccccCCccc
Q 022578 235 GLLDFRSLNLCTTTPKSL 252 (295)
Q Consensus 235 g~~~~~~~~~~~~~~~~~ 252 (295)
|.+ ..+..++...+
T Consensus 235 G~~----~~~~~~~~~~~ 248 (307)
T d1qyca_ 235 DKT----LEKAYVPEEEV 248 (307)
T ss_dssp TSC----CEEEEECHHHH
T ss_pred CCC----CcEEECCHHHH
Confidence 988 56666665433
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=8.5e-26 Score=182.16 Aligned_cols=186 Identities=18% Similarity=0.188 Sum_probs=144.9
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
||||||||++|+++|+++|+ +|++++|++....... ..++++..+|+.+.+.+.++++ ++|+|||
T Consensus 20 tGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----------~~~i~~~~~D~~~~~~~~~~~~--~~d~vi~ 86 (232)
T d2bkaa1 20 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC 86 (232)
T ss_dssp ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred ECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----------cceeeeeeeccccccccccccc--ccccccc
Confidence 79999999999999999984 8999999876633221 2578889999999999999999 9999999
Q ss_pred cccC-------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcC
Q 022578 79 INGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG 143 (295)
Q Consensus 79 ~a~~-------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~ 143 (295)
+++. +...+.+++++|. ++++||++||.+++..+ +..|.++|..+|+.+++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~------------~~~Y~~~K~~~E~~l~~~~ 154 (232)
T d2bkaa1 87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS------------NFLYLQVKGEVEAKVEELK 154 (232)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------------SSHHHHHHHHHHHHHHTTC
T ss_pred cccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCc------------cchhHHHHHHhhhcccccc
Confidence 9986 3446788999987 89999999999875332 2235599999999999988
Q ss_pred Cc-EEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCceEEecC
Q 022578 144 VN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217 (295)
Q Consensus 144 ~~-~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~ 217 (295)
++ ++|+|||.+||++........+........ .........|+++|+|++++.++.++.. ++.+.+.+
T Consensus 155 ~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~ 223 (232)
T d2bkaa1 155 FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN 223 (232)
T ss_dssp CSEEEEEECCEEECTTGGGSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred ccceEEecCceeecCCCcCcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence 75 999999999999765555555555443322 2233445679999999999999877654 44665543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.92 E-value=7.7e-25 Score=182.74 Aligned_cols=210 Identities=18% Similarity=0.172 Sum_probs=167.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
||||||||++|+++|.+.|+.| ++++.... +.+|++|.+.+++++++.++|+|||+|
T Consensus 6 tG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~----------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A 62 (298)
T d1n2sa_ 6 FGKTGQVGWELQRSLAPVGNLI-ALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDVIVNAA 62 (298)
T ss_dssp ECTTSHHHHHHHHHTTTTSEEE-EECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ECCCCHHHHHHHHHHHhCCCEE-EEECCCcc----------------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence 7999999999999999988654 44544332 136899999999999988899999999
Q ss_pred cC----------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhhhc
Q 022578 81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK 142 (295)
Q Consensus 81 ~~----------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~ 142 (295)
|. |..++.+++++++ ...+++++||..+|+.....+.+|+.+..|.+.| .+|..+|.+++..
T Consensus 63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~ 142 (298)
T d1n2sa_ 63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN 142 (298)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence 85 3456888999988 5678999999999998888899999999998865 9999999999887
Q ss_pred CCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC---CCCCCceEEecCCc
Q 022578 143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVFNISGEK 219 (295)
Q Consensus 143 ~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~---~~~~~~~~~i~~~~ 219 (295)
.....++|++..|+..... ....+...+..+..+... +....++++++|+++++..++.. ....+++||+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~ 219 (298)
T d1n2sa_ 143 CPKHLIFRTSWVYAGKGNN-FAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG 219 (298)
T ss_dssp CSSEEEEEECSEECSSSCC-HHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred hcccccccccceeeccCCc-cchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccccccccccCCC
Confidence 7777888887777654332 344455666666666554 34678999999999999887752 33446799999999
Q ss_pred ccCHHHHHHHHHHHhCC
Q 022578 220 YVTFDGLARACAKVTGL 236 (295)
Q Consensus 220 ~~t~~e~~~~i~~~~g~ 236 (295)
.+++.++++.+.+..+.
T Consensus 220 ~~~~~~~~~~i~~~~~~ 236 (298)
T d1n2sa_ 220 TTTWHDYAALVFDEARK 236 (298)
T ss_dssp CEEHHHHHHHHHHHHHH
T ss_pred ceecHHHHHHHHhhhhc
Confidence 99999999999887654
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=1.4e-24 Score=181.82 Aligned_cols=221 Identities=17% Similarity=0.168 Sum_probs=148.4
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHH-HHhhh---cCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLS---AKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~~---~~~~d~ 75 (295)
|||+||||++|+++|+++|+ +|+++++-...... . .+ .+....|..+.+.+ ...+. -..+++
T Consensus 5 TGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (307)
T d1eq2a_ 5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V------NL------VDLNIADYMDKEDFLIQIMAGEEFGDVEA 71 (307)
T ss_dssp ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-H------HH------HTSCCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred ecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-h------cc------cccchhhhccchHHHHHHhhhhcccchhh
Confidence 79999999999999999995 79998744333110 0 00 01111122222222 22221 137899
Q ss_pred EEEcccC--------------ChhcHHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHh
Q 022578 76 VYDINGR--------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL 139 (295)
Q Consensus 76 vi~~a~~--------------~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~ 139 (295)
|+|+|+. +..++.++++++. ...++|+.||..+++........++.+..|.+.| .+|..+|.++
T Consensus 72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~ 151 (307)
T d1eq2a_ 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV 151 (307)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence 9999875 3456778888887 4446888888888877666666666666676665 9999999887
Q ss_pred h----hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCccc-CCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 022578 140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209 (295)
Q Consensus 140 ~----~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~i~~~~~~~~~~ 209 (295)
+ +.+++++++||+.+|||+.. ......++..+..++...+ .|+++..++++|++|+++++..++.++.
T Consensus 152 ~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-- 229 (307)
T d1eq2a_ 152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-- 229 (307)
T ss_dssp HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred cccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--
Confidence 4 57899999999999999762 2345566677777765443 4778888999999999999999988753
Q ss_pred CceEEecCCcccCHHHHHHHHHHHhCC
Q 022578 210 RQVFNISGEKYVTFDGLARACAKVTGL 236 (295)
Q Consensus 210 ~~~~~i~~~~~~t~~e~~~~i~~~~g~ 236 (295)
.+.|++++++..++.|+++.+.+..+.
T Consensus 230 ~~~~~~~~~~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 230 SGIFNLGTGRAESFQAVADATLAYHKK 256 (307)
T ss_dssp CEEEEESCSCCBCHHHHHHHC------
T ss_pred ccccccccccchhHHHHHHHHHHhcCC
Confidence 469999999999999999999887764
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.90 E-value=8.2e-24 Score=180.81 Aligned_cols=227 Identities=13% Similarity=0.059 Sum_probs=165.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh-HHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~ 79 (295)
||||||||++|+++|+++||+|++++|++++... .......+++++.+|+.|+ +.++.++. ++|++++.
T Consensus 9 tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--------~~~~~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~~ 78 (350)
T d1xgka_ 9 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--------EELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN 78 (350)
T ss_dssp ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--------HHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred ECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--------hhhcccCCCEEEEeeCCCcHHHHHHHhc--CCceEEee
Confidence 7999999999999999999999999999876321 0112236899999999985 45777888 89998876
Q ss_pred ccC----ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhcCCcEEEeccCe
Q 022578 80 NGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVY 153 (295)
Q Consensus 80 a~~----~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~i~R~~~ 153 (295)
... +...+.++++++. +++++++.||........ ......++.+|...|.++++.+.+++++||+.
T Consensus 79 ~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~--------~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~ 150 (350)
T d1xgka_ 79 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG--------PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI 150 (350)
T ss_dssp CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS--------SCCCCTTTHHHHHHHHHHHTSSSCEEEEEECE
T ss_pred cccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCC--------cccchhhhhhHHHHHHHHHhhccCceeeeece
Confidence 543 4557899999987 888999998866432211 11223355889999999999999999999999
Q ss_pred eecCCCCCchHHHHHHHHHcCC-CcccCCCCCceeeeeeH-HHHHHHHHHHhcCC--CCCCceEEecCCcccCHHHHHHH
Q 022578 154 IYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHV-KDLARAFVQVLGNE--KASRQVFNISGEKYVTFDGLARA 229 (295)
Q Consensus 154 i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~-~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~t~~e~~~~ 229 (295)
++++................+. ....+.+++..++++++ +|+++++..++.++ ...|+.|++++ +.+|+.|+++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~ 229 (350)
T d1xgka_ 151 YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAA 229 (350)
T ss_dssp EGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHH
T ss_pred eeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHH
Confidence 9886421110000000111222 13445667788888987 79999999998753 24678898887 56999999999
Q ss_pred HHHHhCCCCCCCCcccccCCc
Q 022578 230 CAKVTGLLDFRSLNLCTTTPK 250 (295)
Q Consensus 230 i~~~~g~~~~~~~~~~~~~~~ 250 (295)
+++.+|++ ..+.+++..
T Consensus 230 l~~~~G~~----v~~~~vp~~ 246 (350)
T d1xgka_ 230 FSRALNRR----VTYVQVPKV 246 (350)
T ss_dssp HHHHHTSC----EEEEECSSC
T ss_pred HHHHHCCc----ceEEECCHH
Confidence 99999998 556555543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.90 E-value=2.8e-24 Score=174.12 Aligned_cols=206 Identities=16% Similarity=0.138 Sum_probs=148.6
Q ss_pred CCcCCcchHHHHHHHHHCCCe--EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
||||||||++++++|+++|++ |++++|++++.... ..+++++.+|+++.+.+.++++ ++|+|||
T Consensus 9 tGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~ 74 (252)
T d2q46a1 9 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------GGEADVFIGDITDADSINPAFQ--GIDALVI 74 (252)
T ss_dssp ESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred ECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc------------cCCcEEEEeeeccccccccccc--cceeeEE
Confidence 799999999999999999965 66778887663221 2578999999999999999999 9999999
Q ss_pred cccC-----------------------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 79 INGR-----------------------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 79 ~a~~-----------------------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+++. +..++.++++.+. ..+++.+.|+...+..... ........
T Consensus 75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~ 149 (252)
T d2q46a1 75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP-----LNKLGNGN 149 (252)
T ss_dssp CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG-----GGGGGGCC
T ss_pred EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc-----cccccccc
Confidence 9875 2346788888876 7788888888776432111 00011111
Q ss_pred cchhhHHHHHHhhhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 022578 128 RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 207 (295)
Q Consensus 128 ~~~~k~~~E~~~~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 207 (295)
+...+...+.+....+++++++||+++||+...... ...+..... .....+++|++|+|++++.++.++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-------~~~~~~~~~---~~~~~~~i~~~Dva~a~~~~l~~~~ 219 (252)
T d2q46a1 150 ILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE-------LLVGKDDEL---LQTDTKTVPRADVAEVCIQALLFEE 219 (252)
T ss_dssp HHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSC-------EEEESTTGG---GGSSCCEEEHHHHHHHHHHHTTCGG
T ss_pred hhhhhhhhhhhhhcccccceeecceEEECCCcchhh-------hhhccCccc---ccCCCCeEEHHHHHHHHHHHhCCcc
Confidence 235566667777889999999999999999652110 001111111 1233578999999999999999988
Q ss_pred CCCceEEecCCc---ccCHHHHHHHHHHHhC
Q 022578 208 ASRQVFNISGEK---YVTFDGLARACAKVTG 235 (295)
Q Consensus 208 ~~~~~~~i~~~~---~~t~~e~~~~i~~~~g 235 (295)
..+++||++++. ..++.|+.+.+++..+
T Consensus 220 ~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 220 AKNKAFDLGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp GTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred ccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence 888999998743 3567788777766544
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.86 E-value=2.4e-22 Score=159.49 Aligned_cols=168 Identities=20% Similarity=0.171 Sum_probs=118.5
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
||||||||++|+++|+++|+ +|++++|++.... +.+ ..+..|..++...+. ..+|+|||
T Consensus 8 tGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------------~~~---~~~~~d~~~~~~~~~-~~~d~vi~ 68 (212)
T d2a35a1 8 AGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------------PRL---DNPVGPLAELLPQLD-GSIDTAFC 68 (212)
T ss_dssp ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------------TTE---ECCBSCHHHHGGGCC-SCCSEEEE
T ss_pred ECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------------ccc---cccccchhhhhhccc-cchheeee
Confidence 79999999999999999997 6777777654411 223 334445444444443 37899999
Q ss_pred cccC--------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhhhc
Q 022578 79 INGR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK 142 (295)
Q Consensus 79 ~a~~--------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~ 142 (295)
++|. +...+.+++++|+ ++++||++||.+++... ...|.++|..+|+.+++.
T Consensus 69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~------------~~~y~~~K~~~E~~l~~~ 136 (212)
T d2a35a1 69 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS------------SIFYNRVKGELEQALQEQ 136 (212)
T ss_dssp CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------------SSHHHHHHHHHHHHHTTS
T ss_pred eeeeeccccccccccccchhhhhhhccccccccccccccccccccccccc------------ccchhHHHHHHhhhcccc
Confidence 9876 3446788999988 89999999998875321 123459999999999988
Q ss_pred CCc-EEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 022578 143 GVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 207 (295)
Q Consensus 143 ~~~-~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~ 207 (295)
+.+ ++|+||+.+||+.........+ ..++..... ...++||++|+|++++.++.++.
T Consensus 137 ~~~~~~I~Rp~~v~G~~~~~~~~~~~------~~~~~~~~~--~~~~~i~v~DvA~ai~~~~~~~~ 194 (212)
T d2a35a1 137 GWPQLTIARPSLLFGPREEFRLAEIL------AAPIARILP--GKYHGIEACDLARALWRLALEEG 194 (212)
T ss_dssp CCSEEEEEECCSEESTTSCEEGGGGT------TCCCC------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ccccceeeCCcceeCCcccccHHHHH------HHHHhhccC--CCCcEEEHHHHHHHHHHHHcCCC
Confidence 874 9999999999997643221111 111111111 22467999999999999998764
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.62 E-value=1.4e-15 Score=123.01 Aligned_cols=196 Identities=14% Similarity=0.130 Sum_probs=135.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.+++++|+++|++|++.+|+.++..+. ..++.+...++.++.+|+++++++++++++ ..+|+
T Consensus 17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~-----~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi 91 (255)
T d1fmca_ 17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHV-----VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 89999999999999999999999999987653221 122334446789999999999888877755 38999
Q ss_pred EEEcccCC-------------------hhcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE-------------------ADEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~-------------------~~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+||.. ..++..+. ..+. +..++|++||...+... .....|..
T Consensus 92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~----------~~~~~Y~a 161 (255)
T d1fmca_ 92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------INMTSYAS 161 (255)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC----------TTCHHHHH
T ss_pred eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc----------cccccchh
Confidence 99999872 22233333 3333 56689999987764221 11223458
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~ 203 (295)
+|...+.+.+ .+|+++..+.||.+..+...........+...+..++. -+..++|+|++++.++
T Consensus 162 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~---------R~g~pedvA~~v~fL~ 232 (255)
T d1fmca_ 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR---------RLGQPQDIANAALFLC 232 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC---------SCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHh
Confidence 9999887753 46899999999998765321111222333333333321 2356899999999998
Q ss_pred cCC--CCCCceEEecCCcc
Q 022578 204 GNE--KASRQVFNISGEKY 220 (295)
Q Consensus 204 ~~~--~~~~~~~~i~~~~~ 220 (295)
.+. ...|+.+.+.||..
T Consensus 233 S~~s~~itG~~i~vDGG~~ 251 (255)
T d1fmca_ 233 SPAASWVSGQILTVSGGGV 251 (255)
T ss_dssp SGGGTTCCSCEEEESTTSC
T ss_pred CchhcCCcCCEEEECcCcc
Confidence 653 34788999999863
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.61 E-value=2.1e-15 Score=121.03 Aligned_cols=187 Identities=16% Similarity=0.137 Sum_probs=131.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.++++.|+++|++|++.+|++++..+. ..+...++.++.+|++|++++++++++ ..+|+
T Consensus 12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 12 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM--------AAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 79999999999999999999999999987663211 122335788999999999988887765 37999
Q ss_pred EEEcccCC--------------------hhcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++..+. ..+. +..++|++||...+.... ....|.
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~----------~~~~Y~ 153 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV----------ACHGYT 153 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBHHHH
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc----------cccchh
Confidence 99999872 22333333 3333 567999999987642211 112345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ .+|+++..+.||.+..+.... . ....... ....+..++|+|++++.+
T Consensus 154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~---------~-~~~~~~~-----pl~R~~~p~diA~~v~fL 218 (244)
T d1nffa_ 154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW---------V-PEDIFQT-----ALGRAAEPVEVSNLVVYL 218 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT---------S-CTTCSCC-----SSSSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh---------h-hHHHHhc-----cccCCCCHHHHHHHHHHH
Confidence 99999887753 578999999999987763110 0 0000011 112357899999999999
Q ss_pred hcCC--CCCCceEEecCCcc
Q 022578 203 LGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~ 220 (295)
+.+. ...|+.+.+.+|..
T Consensus 219 ~s~~s~~itG~~i~vDGG~~ 238 (244)
T d1nffa_ 219 ASDESSYSTGAEFVVDGGTV 238 (244)
T ss_dssp HSGGGTTCCSCEEEESTTGG
T ss_pred hChhhCCCcCCEEEECCCee
Confidence 8643 34688999988754
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.60 E-value=3.5e-15 Score=120.44 Aligned_cols=193 Identities=17% Similarity=0.245 Sum_probs=133.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||.++++.|+++|++|++.+|+.+...+. ..++.+...++..+.+|++|++++.+++++ ..+|+
T Consensus 16 TGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~-----~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 90 (251)
T d2c07a1 16 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSV-----VDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI 90 (251)
T ss_dssp ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence 79999999999999999999999999987653221 112333345789999999999999888765 38999
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+++.. ..+. +.++..+. +..++|++||...+.... ....|.
T Consensus 91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~----------~~~~Y~ 160 (251)
T d2c07a1 91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV----------GQANYS 160 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCHHHH
T ss_pred eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC----------CCHHHH
Confidence 99999872 2223 33344443 667999999977643211 112355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|+++..+.||.+-.+.... ......+.+....++ + -+..++|+|++++.+
T Consensus 161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~-~~~~~~~~~~~~~pl---~------R~~~pedvA~~v~fL 230 (251)
T d2c07a1 161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPA---G------RMGTPEEVANLACFL 230 (251)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT---S------SCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc-cCHHHHHHHHhcCCC---C------CCcCHHHHHHHHHHH
Confidence 99999887753 578999999999998774322 123333444333332 1 245699999999999
Q ss_pred hcCC--CCCCceEEecCC
Q 022578 203 LGNE--KASRQVFNISGE 218 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~ 218 (295)
+.+. ...|+.+.+.||
T Consensus 231 ~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 231 SSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred hCchhCCCcCcEEEECCC
Confidence 8653 246889999887
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.59 E-value=5.6e-15 Score=118.07 Aligned_cols=183 Identities=17% Similarity=0.241 Sum_probs=127.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||..+++.|+++|++|++.+|+.+.. .++..+++|++|++++++++++ ..+|+
T Consensus 13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 76 (237)
T d1uzma1 13 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV 76 (237)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------------cCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence 89999999999999999999999999987662 4577899999999988887765 27999
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..+. +.++..+. +..++|++||...+... .....|.
T Consensus 77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------~~~~~Y~ 146 (237)
T d1uzma1 77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI----------GNQANYA 146 (237)
T ss_dssp EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------CCHHHH
T ss_pred EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC----------cccHHHH
Confidence 99999872 1222 33344444 55699999997764221 1122355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|+..+.+.+ ..|+++..+.||.+..+.... ......+......++ .-+..++|+|++++.+
T Consensus 147 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL 216 (237)
T d1uzma1 147 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFIPA---------KRVGTPAEVAGVVSFL 216 (237)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGCTT---------CSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence 99999887753 478999999999987652100 011122222222111 1246799999999999
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+.+. ...|+.+.+.||-
T Consensus 217 ~S~~s~~itG~~i~vdGG~ 235 (237)
T d1uzma1 217 ASEDASYISGAVIPVDGGM 235 (237)
T ss_dssp HSGGGTTCCSCEEEESTTT
T ss_pred hCchhcCCcCCeEEECCCC
Confidence 8653 3468899998873
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.59 E-value=9.2e-15 Score=118.48 Aligned_cols=198 Identities=16% Similarity=0.137 Sum_probs=132.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.+++++|+++|++|++.+|+.+...+.. ..++.+...++..+.+|++|++++++++++ .++|+
T Consensus 13 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~----~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi 88 (261)
T d1geea_ 13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV----LEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV 88 (261)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 799999999999999999999999999875421111 112233345788999999999998887765 38999
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC--C-CCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..+ ++.++..+. + ..++|++||...+... .....|
T Consensus 89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~----------~~~~~Y 158 (261)
T d1geea_ 89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW----------PLFVHY 158 (261)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------TTCHHH
T ss_pred eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC----------cccccc
Confidence 99999872 122 333444443 3 3458899987753211 112234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|+..+.+.+ .+|+++..+.||.+..+...... .......+.+..++ .-+..++|+|++++
T Consensus 159 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pediA~~v~ 229 (261)
T d1geea_ 159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM---------GYIGEPEEIAAVAA 229 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT---------SSCBCHHHHHHHHH
T ss_pred ccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence 599999887753 57899999999998776321100 01122222222222 12356899999999
Q ss_pred HHhcCC--CCCCceEEecCCccc
Q 022578 201 QVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
.++.+. ...|+.+.+.+|..+
T Consensus 230 fL~S~~s~~itG~~i~vDGG~sl 252 (261)
T d1geea_ 230 WLASSEASYVTGITLFADGGMTL 252 (261)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHhCchhcCCcCCeEEECCCeeC
Confidence 998653 347899999998643
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.59 E-value=6.1e-15 Score=118.94 Aligned_cols=191 Identities=16% Similarity=0.102 Sum_probs=130.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||.+++++|+++|++|++.+|+.++..+. ..+...++.++.+|+++++++++++++ ..+|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (254)
T d1hdca_ 11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT--------ARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence 79999999999999999999999999987663221 122335789999999999999888765 28999
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++ +.++..++ +..++|++||...+... .....|.
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~----------~~~~~Y~ 152 (254)
T d1hdca_ 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL----------ALTSSYG 152 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------TTCHHHH
T ss_pred EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc----------cchhhHH
Confidence 99999872 2223 33344444 66799999998764221 1122355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceee-e-eeHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQ-L-GHVKDLARAFV 200 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-i~~~D~a~~i~ 200 (295)
.+|...+.+.+ ..|+++..+.||.+..+. .........-... ...+.. + ..++|+|++++
T Consensus 153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~---------~~~~~~~~~~~~~--~~~pl~R~g~~PedvA~~v~ 221 (254)
T d1hdca_ 153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM---------TAETGIRQGEGNY--PNTPMGRVGNEPGEIAGAVV 221 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHHTCCCSTTSC--TTSTTSSCB-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc---------chhcCHHHHHHHH--hCCCCCCCCCCHHHHHHHHH
Confidence 99999887753 468999999999886651 1111111110000 011111 1 35899999999
Q ss_pred HHhcCC--CCCCceEEecCCcc
Q 022578 201 QVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~~ 220 (295)
.++.+. ...|+.+.+.+|-.
T Consensus 222 fL~S~~a~~itG~~i~vDGG~t 243 (254)
T d1hdca_ 222 KLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp HHHSGGGTTCCSCEEEESTTTT
T ss_pred HHhchhhCCCCCceEEeCCCcc
Confidence 998653 34789999988843
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.59 E-value=1.3e-14 Score=116.66 Aligned_cols=194 Identities=16% Similarity=0.183 Sum_probs=127.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||..+++.|+++|++|.+.+|++.+.. ...+.+...++..+.+|++|++++++++++ .++|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~-------~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 11 TGGANGIGRAIAERFAVEGADIAIADLVPAPEA-------EAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH-------HHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999999999999999875421 122344456789999999999988887654 38999
Q ss_pred EEEcccCCh--------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||... .+ ++.++..+. +..++|++||....... .....|.
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~----------~~~~~Y~ 153 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI----------EAYTHYI 153 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC----------SSCHHHH
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC----------cccccch
Confidence 999999731 22 333444444 66799999998764221 1122355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ ..|+++..+.||.+..+............... ... ....-+..++|+|++++.+
T Consensus 154 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~-------~~l~r~~~pedvA~~v~fL 225 (247)
T d2ew8a1 154 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP-NML-------QAIPRLQVPLDLTGAAAFL 225 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTT-------SSSCSCCCTHHHHHHHHHH
T ss_pred hhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHH-HHh-------ccCCCCCCHHHHHHHHHHH
Confidence 89998887653 56899999999998776422111111111110 000 0111245689999999999
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+.+. ...|+.+.+.+|-
T Consensus 226 ~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 226 ASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp TSGGGTTCCSCEEEESSSC
T ss_pred hCchhcCCcCCeEEECCCE
Confidence 8653 2478899998874
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.59 E-value=5.8e-15 Score=118.39 Aligned_cols=189 Identities=17% Similarity=0.186 Sum_probs=131.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||++.||..+++.|+++|++|++.+|+.+...+... ..+++.+.+|++|++++++++++. .+|+
T Consensus 11 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 80 (242)
T d1ulsa_ 11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG 80 (242)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence 7999999999999999999999999998766322111 236788999999999998887652 7999
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..+ ++.++..+. +..+++.+||....+. .....|.
T Consensus 81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~-----------~~~~~Y~ 149 (242)
T d1ulsa_ 81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-----------LGQANYA 149 (242)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-----------TTCHHHH
T ss_pred EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC-----------CCCcchH
Confidence 99999872 112 333444444 4556777776543211 1123355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ .+|+++..+.||.+-.+.... .............++. -+..++|+|++++.+
T Consensus 150 asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl~---------R~~~pedia~~v~fL 219 (242)
T d1ulsa_ 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPLG---------RAGKPLEVAYAALFL 219 (242)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTTC---------SCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc-CCHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHH
Confidence 99999887753 468999999999998775322 2233334443433321 234689999999999
Q ss_pred hcCC--CCCCceEEecCCcc
Q 022578 203 LGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~~ 220 (295)
+.+. ...|+.+.+.+|..
T Consensus 220 ~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 220 LSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp HSGGGTTCCSCEEEESTTTT
T ss_pred hchhhCCCCCcEEEECCCcc
Confidence 8653 34788999988854
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.1e-14 Score=116.84 Aligned_cols=191 Identities=12% Similarity=0.130 Sum_probs=132.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||++.||.++++.|+++|++|++.+|+.++..+ +.+...++..+.+|++|++++++++++. .+|++||+
T Consensus 13 TGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~---------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn 83 (244)
T d1pr9a_ 13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDS---------LVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH---------HHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence 7999999999999999999999999998766321 2223357889999999999999999875 78999999
Q ss_pred ccCCh--------------------hc----HHHHHHhC-C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 80 NGREA--------------------DE----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 80 a~~~~--------------------~~----~~~ll~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
|+... .+ ++.++..+ + +..++|++||...+...+ ....|..+|
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~----------~~~~Y~asK 153 (244)
T d1pr9a_ 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT----------NHSVYCSTK 153 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------TBHHHHHHH
T ss_pred cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc----------chhhhhhhH
Confidence 98721 12 33344432 2 456999999987642211 112344899
Q ss_pred HHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 133 ~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
...+.+.+ ..|+++..+.||.+..+.... ..-....+...+..|+ ..+..++|+|++++.++.
T Consensus 154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peevA~~v~fL~S 224 (244)
T d1pr9a_ 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL---------GKFAEVEHVVNAILFLLS 224 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhC
Confidence 98887753 468999999999988763110 0011122223232222 124679999999999986
Q ss_pred CC--CCCCceEEecCCc
Q 022578 205 NE--KASRQVFNISGEK 219 (295)
Q Consensus 205 ~~--~~~~~~~~i~~~~ 219 (295)
+. ...|+.+.+.||-
T Consensus 225 ~~a~~itG~~i~vDGG~ 241 (244)
T d1pr9a_ 225 DRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp GGGTTCCSCEEEESTTG
T ss_pred chhCCcCCcEEEECccH
Confidence 53 3478899998874
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=2.9e-15 Score=120.21 Aligned_cols=191 Identities=15% Similarity=0.158 Sum_probs=132.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||+++++.|+++|++|++.+|+.+...+. ..+...+...+.+|+++++++++++++ .++|+
T Consensus 10 TGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (243)
T d1q7ba_ 10 TGASRGIGRAIAETLAARGAKVIGTATSENGAQAI--------SDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI 81 (243)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH--------HHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence 79999999999999999999999999987663221 122235688999999999988887765 27999
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..+ ++.++..+. +..++|++||...+.... ....|.
T Consensus 82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----------~~~~Y~ 151 (243)
T d1q7ba_ 82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG----------GQANYA 151 (243)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TCHHHH
T ss_pred ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC----------CCHHHH
Confidence 99999872 222 333444443 567999999987643211 122355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ .+|+++..+.||.+-.+.... ........+.+..++ ..+..++|+|+++..+
T Consensus 152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL 221 (243)
T d1q7ba_ 152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA-LSDDQRAGILAQVPA---------GRLGGAQEIANAVAFL 221 (243)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh-hhhhHHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence 99999887753 478999999999886652111 111122222222221 1245799999999999
Q ss_pred hcCC--CCCCceEEecCCc
Q 022578 203 LGNE--KASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~--~~~~~~~~i~~~~ 219 (295)
+.+. ...|+.+.+.||-
T Consensus 222 ~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 222 ASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HSGGGTTCCSCEEEESTTS
T ss_pred hCchhcCCcCCeEEECCCe
Confidence 8653 2478899998874
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.58 E-value=1.4e-14 Score=116.82 Aligned_cols=196 Identities=17% Similarity=0.202 Sum_probs=133.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||++.||+.+++.|+++|++|.+.+|+.++..+.. .++ .....++.++.+|+++++++++++++ .++|
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-----~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 85 (251)
T d1vl8a_ 11 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-----QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 85 (251)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999999999876632211 111 22345788999999999988888765 2799
Q ss_pred EEEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..+ ++.++..++ +..++|++||...... .......|
T Consensus 86 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~---------~~~~~~~Y 156 (251)
T d1vl8a_ 86 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV---------TMPNISAY 156 (251)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC---------CSSSCHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc---------cCccccch
Confidence 999999872 122 344445554 5679999998654210 00111234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
..+|...+.+.+ .+|+++..+.||.+-.+...... .......+.+..|+. .+..++|+|++++
T Consensus 157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~ 227 (251)
T d1vl8a_ 157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG---------RTGVPEDLKGVAV 227 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS---------SCBCGGGGHHHHH
T ss_pred HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence 589998887753 57899999999999876431110 012223333333221 2345899999999
Q ss_pred HHhcCC--CCCCceEEecCCc
Q 022578 201 QVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~ 219 (295)
.++.+. ...|+.+.+.+|-
T Consensus 228 fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 228 FLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp HHHSGGGTTCCSCEEEESTTG
T ss_pred HHhCchhCCCcCcEEEeCcCe
Confidence 988653 3468899998874
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=1.1e-14 Score=117.32 Aligned_cols=193 Identities=18% Similarity=0.171 Sum_probs=132.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.++++.|+++|++|++.+|+.+... .+.+...++.++.+|++|++++++++++ .++|+
T Consensus 12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~---------~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (250)
T d1ydea1 12 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGR---------ALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 82 (250)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------HHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------HHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 799999999999999999999999999876532 2233346789999999999998887765 37999
Q ss_pred EEEcccCC---------------------hhcH----HHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE---------------------ADEV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~---------------------~~~~----~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++ +.++..++ +..++|++||........ ....|.
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~----------~~~~Y~ 152 (250)
T d1ydea1 83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------QAVPYV 152 (250)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----------TCHHHH
T ss_pred EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccccc----------CcchhH
Confidence 99999852 1123 33333444 447999999987643211 123355
Q ss_pred hhhHHHHHHh-------hhcCCcEEEeccCeeecCCC-----CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 130 ~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
.+|...+.+. ...|+++..+.||.+..|.. ........+.......|+ .-+..++|+|+
T Consensus 153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~p~eva~ 223 (250)
T d1ydea1 153 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVGA 223 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHHH
T ss_pred HHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------CCCCCHHHHHH
Confidence 9999888775 35789999999999866420 000111122222222222 12466999999
Q ss_pred HHHHHhcC-CCCCCceEEecCCccc
Q 022578 198 AFVQVLGN-EKASRQVFNISGEKYV 221 (295)
Q Consensus 198 ~i~~~~~~-~~~~~~~~~i~~~~~~ 221 (295)
+++.++.+ ....|+.+.+.+|..+
T Consensus 224 ~v~fL~Sda~~itG~~i~vDGG~~l 248 (250)
T d1ydea1 224 AAVFLASEANFCTGIELLVTGGAEL 248 (250)
T ss_dssp HHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred HHHHHhCccCCCcCCeEEECCCccc
Confidence 99998853 2247889999888654
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.58 E-value=4.7e-15 Score=118.95 Aligned_cols=191 Identities=15% Similarity=0.168 Sum_probs=131.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-CCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~ 79 (295)
|||++.||..++++|+++|++|++.+|+.++.. ++.+...++..+.+|++|+++++++++++ ++|++||+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~---------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn 81 (242)
T d1cyda_ 11 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV---------SLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 81 (242)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------HHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------HHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence 799999999999999999999999999876532 12223467899999999999999999875 78999999
Q ss_pred ccCC--------------------hhcHHHH----HHhC-C--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 80 NGRE--------------------ADEVEPI----LDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 80 a~~~--------------------~~~~~~l----l~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
||.. ..++..+ +..+ + ...++|++||...+...+ ....|..+|
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------~~~~Y~asK 151 (242)
T d1cyda_ 82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------NLITYSSTK 151 (242)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------TBHHHHHHH
T ss_pred CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC----------ccccccchH
Confidence 9872 1223333 3222 2 345899999987542211 112345899
Q ss_pred HHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 133 ~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
...+.+.+ ..|+++..+.||.+..+.... .........+....|+ ..+..++|+|++++.++.
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peeva~~v~fL~S 222 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL---------RKFAEVEDVVNSILFLLS 222 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhC
Confidence 99887763 468999999999887652100 0001122222222222 124569999999999986
Q ss_pred CC--CCCCceEEecCCc
Q 022578 205 NE--KASRQVFNISGEK 219 (295)
Q Consensus 205 ~~--~~~~~~~~i~~~~ 219 (295)
+. ...|+.+.+.||-
T Consensus 223 ~~s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 223 DRSASTSGGGILVDAGY 239 (242)
T ss_dssp GGGTTCCSSEEEESTTG
T ss_pred chhcCcCCceEEeCcch
Confidence 53 3478899998874
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.57 E-value=5.2e-15 Score=119.76 Aligned_cols=194 Identities=16% Similarity=0.177 Sum_probs=132.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.++++.|+++|++|++.+|+.+...+. ..+...++..+.+|++|++++++++++ ..+|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~--------~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 82 (256)
T d1k2wa_ 11 TGSARGIGRAFAEAYVREGARVAIADINLEAARAT--------AAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI 82 (256)
T ss_dssp ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 79999999999999999999999999987663221 233346789999999999999888765 38999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh-----CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA-----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~-----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++..+.++ ++ ...++|++||...+.... ....|
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----------~~~~Y 152 (256)
T d1k2wa_ 83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA----------LVGVY 152 (256)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------TCHHH
T ss_pred EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc----------cccch
Confidence 99999972 2233333332 22 346999999987642211 12234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHH-----------HHHHHHcCCCcccCCCCCceeeee
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-----------FFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
..+|...+.+.+ ..|+++..+.||.+-.+.... .... ..+.+....|+ .-+.
T Consensus 153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~~ 222 (256)
T d1k2wa_ 153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG-VDAKFADYENLPRGEKKRQVGAAVPF---------GRMG 222 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHH-HHHHHHHHHTCCTTHHHHHHHHHSTT---------SSCB
T ss_pred hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhh-hhhhhhhhccCChHHHHHHHHhcCCC---------CCCc
Confidence 489998887753 568999999999888763100 0000 01111111111 1246
Q ss_pred eHHHHHHHHHHHhcCC--CCCCceEEecCCcccC
Q 022578 191 HVKDLARAFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
.++|+|++++.++.+. ...|+.+.+.||..+|
T Consensus 223 ~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 223 RAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp CHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred CHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence 6999999999988643 3468999999987654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.57 E-value=7.3e-15 Score=119.00 Aligned_cols=197 Identities=14% Similarity=0.143 Sum_probs=122.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----C--CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~--~~d 74 (295)
|||++-||..+++.|+++|++|++.+|+.++..+.. .++.+...++..+.+|+++++++++++++ + .+|
T Consensus 14 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id 88 (259)
T d1xq1a_ 14 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD 88 (259)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence 899999999999999999999999999876643221 12233345789999999999888777654 2 489
Q ss_pred EEEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..++ +.++..++ +..++|++||........ ....|
T Consensus 89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----------~~~~Y 158 (259)
T d1xq1a_ 89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS----------VGSIY 158 (259)
T ss_dssp EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------CCHH
T ss_pred cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccc----------ccccc
Confidence 999999872 2223 33334444 667999999977532211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+.+ ..|+++..+.||.+-.|...........+......| ...+..++|+|++++.
T Consensus 159 ~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~p---------l~R~~~pedvA~~v~f 229 (259)
T d1xq1a_ 159 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKP---------LGRFGEPEEVSSLVAF 229 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHH
T ss_pred cccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCC---------CCCCcCHHHHHHHHHH
Confidence 599998887653 478999999999987763211111111111111111 1224568999999999
Q ss_pred HhcCC--CCCCceEEecCCccc
Q 022578 202 VLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~~ 221 (295)
++.+. ...|+.+.+.+|-.+
T Consensus 230 L~S~~s~~iTG~~i~vDGG~s~ 251 (259)
T d1xq1a_ 230 LCMPAASYITGQTICVDGGLTV 251 (259)
T ss_dssp HTSGGGTTCCSCEEECCCCEEE
T ss_pred HhCchhcCCcCcEEEeCCCEEC
Confidence 98643 346889999888543
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.57 E-value=7.6e-15 Score=117.84 Aligned_cols=195 Identities=16% Similarity=0.191 Sum_probs=132.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||.+++++|+++|++|.+.+++.....+.+ ..++.+...++.++.+|++|++++++++++ ..+|+
T Consensus 7 TGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (244)
T d1edoa_ 7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEV----SKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV 82 (244)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 899999999999999999999998766544322111 122334446788999999999998887765 38999
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..+ ++.++..+. +..++|++||...+-... ....|.
T Consensus 83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~----------~~~~Y~ 152 (244)
T d1edoa_ 83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI----------GQANYA 152 (244)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCHHHH
T ss_pred cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC----------CCHHHH
Confidence 99999872 122 344444444 667999999987643211 122355
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~ 202 (295)
.+|...+.+.+ .+|+++..+.||.+-.+.... ......+......++ .-+..++|+|+++..+
T Consensus 153 asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl---------~R~~~p~dvA~~v~fL 222 (244)
T d1edoa_ 153 AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIPL---------GRTGQPENVAGLVEFL 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCTT---------CSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHH-hhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence 99999887763 468999999999886652111 112233333333222 1245699999999998
Q ss_pred hcCCC---CCCceEEecCCc
Q 022578 203 LGNEK---ASRQVFNISGEK 219 (295)
Q Consensus 203 ~~~~~---~~~~~~~i~~~~ 219 (295)
+..+. ..|+.+.+.||-
T Consensus 223 a~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 223 ALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHCSGGGGCCSCEEEESTTT
T ss_pred HCCchhcCCcCCeEEeCCCe
Confidence 64332 468899998874
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.57 E-value=1.1e-14 Score=118.00 Aligned_cols=196 Identities=14% Similarity=0.109 Sum_probs=132.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----C--CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~--~~d 74 (295)
|||++-||.++++.|+++|++|++.+|+.++..+. ..++.+...++.++.+|++|++++++++++ . .+|
T Consensus 14 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~-----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id 88 (259)
T d2ae2a_ 14 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDC-----LTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 88 (259)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence 79999999999999999999999999987664322 122333345788999999999888877654 2 589
Q ss_pred EEEEcccCC--------------------hhcHHH----HHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..++.. ++..+. +..++|++||....... .....|
T Consensus 89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------~~~~~Y 158 (259)
T d2ae2a_ 89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV----------PYEAVY 158 (259)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC----------TTCHHH
T ss_pred EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc----------ccccch
Confidence 999999872 222333 333333 55699999997753211 112234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCC----CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..+|...+.+.+ ..++++..+.||.+-.+.. ........+..+....++. -+..++|+|+
T Consensus 159 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~pedvA~ 229 (259)
T d2ae2a_ 159 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR---------RMGEPKELAA 229 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC---------SCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence 589998887753 4689999999999876521 1111122223333333221 2356999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCcc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+++.++.+. ...|+.+.+.+|-.
T Consensus 230 ~v~fL~S~~s~~itG~~i~VDGG~~ 254 (259)
T d2ae2a_ 230 MVAFLCFPAASYVTGQIIYVDGGLM 254 (259)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHhCchhCCCcCcEEEECCCeE
Confidence 999998653 24688999988743
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.56 E-value=2.3e-14 Score=115.96 Aligned_cols=196 Identities=13% Similarity=0.105 Sum_probs=131.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----C--CCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~--~~d 74 (295)
|||++-||.+++++|+++|++|++.+|++++..+. ..++.+....+.++.+|+++.+++++++++ . .+|
T Consensus 12 TGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~-----~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id 86 (258)
T d1ae1a_ 12 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC-----LEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 86 (258)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence 79999999999999999999999999987663321 122344446788899999999988776643 3 489
Q ss_pred EEEEcccCCh--------------------hcHHHHHH----hCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~~--------------------~~~~~ll~----~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+++|++|... .+...+.+ .+. +..++|++||....... .....|
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~----------~~~~~Y 156 (258)
T d1ae1a_ 87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL----------PSVSLY 156 (258)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC----------TTCHHH
T ss_pred EEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc----------ccchhH
Confidence 9999998721 22333333 333 67799999998864321 122234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-----chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
..+|...+.+.+ ..|+++..+.||.+..+.... .........+....+. ..+..++|+|
T Consensus 157 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------gR~~~pediA 227 (258)
T d1ae1a_ 157 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEVS 227 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence 489998887763 468999999999998764211 1112223333222222 1246799999
Q ss_pred HHHHHHhcC--CCCCCceEEecCCcc
Q 022578 197 RAFVQVLGN--EKASRQVFNISGEKY 220 (295)
Q Consensus 197 ~~i~~~~~~--~~~~~~~~~i~~~~~ 220 (295)
+++..++.+ ....|+.+.+.+|-.
T Consensus 228 ~~v~fL~S~~s~~itG~~i~vDGG~s 253 (258)
T d1ae1a_ 228 ALIAFLCFPAASYITGQIIWADGGFT 253 (258)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhChhhCCCcCcEEEeCCCee
Confidence 999999964 334788899988743
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.56 E-value=1.3e-14 Score=117.71 Aligned_cols=194 Identities=12% Similarity=0.208 Sum_probs=131.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.++++.|+++|++|++.+|+.+...+. ..++.+...++..+.+|++|+++++++++. ..+|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~-----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 85 (260)
T d1zema1 11 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKA-----EASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF 85 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence 79999999999999999999999999987653221 122333345788999999999888887765 38999
Q ss_pred EEEcccCC---------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE---------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~---------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||++|.. ..+ ++.++..+. +..++|++||...+...+ ....|
T Consensus 86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----------~~~~Y 155 (260)
T d1zema1 86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP----------NMAAY 155 (260)
T ss_dssp EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT----------TBHHH
T ss_pred ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc----------chHHH
Confidence 99999862 112 233333333 667999999987643211 11234
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCC---------------CCchHHHHHHHHHcCCCcccCCCCCce
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN---------------YNPVEEWFFHRLKAGRPIPIPGSGIQV 186 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (295)
..+|...+.+.+ ..|+++..+.||.+-.+.. .......+.+.+....|+
T Consensus 156 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------- 226 (260)
T d1zema1 156 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--------- 226 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT---------
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC---------
Confidence 589998887753 4689999999999877521 011112222222222222
Q ss_pred eeeeeHHHHHHHHHHHhcCC--CCCCceEEecCC
Q 022578 187 TQLGHVKDLARAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 187 ~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
.-+..++|+|++++.++.+. ...|+.+.+.||
T Consensus 227 ~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 227 RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 12356899999999998753 346888888765
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.55 E-value=4.5e-15 Score=119.44 Aligned_cols=192 Identities=14% Similarity=0.111 Sum_probs=128.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||..+++.|+++|++|.+.+|+++... ..+ ..+..++++|++|.+++++++++ ..+|+
T Consensus 11 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~----------~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 79 (248)
T d2d1ya1 11 TGGARGIGRAIAQAFAREGALVALCDLRPEGKE----------VAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDV 79 (248)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH----------HHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH----------HHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence 799999999999999999999999999865521 111 12567899999999888877765 38999
Q ss_pred EEEcccCC--------------------hhcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||+||.. ..++.++. ..++ +..++|++||...+.... ....|.
T Consensus 80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~----------~~~~Y~ 149 (248)
T d2d1ya1 80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ----------ENAAYN 149 (248)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT----------TBHHHH
T ss_pred EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccc----------ccchhH
Confidence 99999872 22333333 3343 556999999987642211 122345
Q ss_pred hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 130 ~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
.+|+..+.+.+ .+|+++..+.||.+-.|... ........+...+..+ ...+..++|+|+
T Consensus 150 asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p---------l~R~~~pedia~ 220 (248)
T d2d1ya1 150 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA---------LRRLGKPEEVAE 220 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTST---------TSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCC---------CCCCcCHHHHHH
Confidence 99999887753 46899999999988665210 0000001111111111 123467999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCcccC
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
++..++.+. ...|+.+.+.||-.-+
T Consensus 221 ~v~fL~S~~s~~itG~~i~vDGG~tas 247 (248)
T d2d1ya1 221 AVLFLASEKASFITGAILPVDGGMTAS 247 (248)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHHHhCchhcCCCCcEEEcCcCcccc
Confidence 999998643 3478899998885443
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.54 E-value=1.2e-14 Score=117.18 Aligned_cols=194 Identities=21% Similarity=0.204 Sum_probs=127.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.++++.|+++|++|.+.+|+.+...+... + .....++.++.+|++|++++.+++++ ..+|+
T Consensus 12 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-----~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 85 (251)
T d1zk4a1 12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-----S-VGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----H-HCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----H-hCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence 7999999999999999999999999998765321110 1 11135789999999999988887765 38999
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--CC-CcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++ +.++..+. +. .++|++||...+... .....|
T Consensus 86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~----------~~~~~Y 155 (251)
T d1zk4a1 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD----------PSLGAY 155 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC----------TTCHHH
T ss_pred EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC----------CCchhH
Confidence 99999872 2223 33344444 33 488999997754211 112234
Q ss_pred chhhHHHHHHh---------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~---------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|...+.+. ..+|+++..+.||.+..+.......... ..... -..| ..-+..++|+|+++
T Consensus 156 ~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~-~~~p-----l~R~~~pedvA~~v 226 (251)
T d1zk4a1 156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEE---AMSQR-TKTP-----MGHIGEPNDIAYIC 226 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHH---HHTST-TTCT-----TSSCBCHHHHHHHH
T ss_pred HHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHH---HHHHH-hCCC-----CCCCcCHHHHHHHH
Confidence 48888876553 2457999999999987652111100111 11111 0111 11346799999999
Q ss_pred HHHhcCC--CCCCceEEecCCc
Q 022578 200 VQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~--~~~~~~~~i~~~~ 219 (295)
+.++.+. ...|+.+.+.||-
T Consensus 227 ~fL~S~~s~~itG~~i~vDGG~ 248 (251)
T d1zk4a1 227 VYLASNESKFATGSEFVVDGGY 248 (251)
T ss_dssp HHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhCchhCCCcCcEEEECccc
Confidence 9998653 2468899998873
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.54 E-value=2.2e-14 Score=116.15 Aligned_cols=194 Identities=20% Similarity=0.245 Sum_probs=131.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.++++.|+++|++|++.+|+.+...+. ..++.+...++..+.+|++|++++++++++ ..+|+
T Consensus 8 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~-----~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (257)
T d2rhca1 8 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTT-----LKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV 82 (257)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 79999999999999999999999999987663321 122334446789999999999998887765 27999
Q ss_pred EEEcccCC--------------------hhcHHHHHHh----CC----CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE--------------------ADEVEPILDA----LP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll~~----~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||+||.. ..++..+.++ +. +..++|++||...+.... ....
T Consensus 83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~----------~~~~ 152 (257)
T d2rhca1 83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV----------HAAP 152 (257)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT----------TCHH
T ss_pred EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc----------cchh
Confidence 99999872 2233334333 22 456899999877642211 1223
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCC----------CCchHHHHHHHHHcCCCcccCCCCCceeeee
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
|..+|+..+.+.+ ..|+++..+.||.+-.+.. ...........+....|+ .-+.
T Consensus 153 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl---------gR~~ 223 (257)
T d2rhca1 153 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI---------GRYV 223 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT---------SSCB
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC---------CCCc
Confidence 5599998887763 4679999999998865421 000011222222222221 1246
Q ss_pred eHHHHHHHHHHHhcC--CCCCCceEEecCC
Q 022578 191 HVKDLARAFVQVLGN--EKASRQVFNISGE 218 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~--~~~~~~~~~i~~~ 218 (295)
.++|+|++++.++.+ ....|+.+.+.||
T Consensus 224 ~pedia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 224 QPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 699999999999864 3346889999887
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.54 E-value=2.5e-14 Score=115.75 Aligned_cols=196 Identities=16% Similarity=0.167 Sum_probs=131.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||++-||..+++.|+++|++|.+.+|+.+...+.. .++.+. ..++..+.+|++|++++++++++ ..+
T Consensus 10 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 84 (258)
T d1iy8a_ 10 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI 84 (258)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 799999999999999999999999999876632111 111111 23678899999999998887765 279
Q ss_pred cEEEEcccCC---------------------hhcHHHHH----HhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGRE---------------------ADEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK 126 (295)
Q Consensus 74 d~vi~~a~~~---------------------~~~~~~ll----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~ 126 (295)
|++||+||.. ..++..+. ..++ +..++|++||...+-.. ....
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------~~~~ 154 (258)
T d1iy8a_ 85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI----------GNQS 154 (258)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----------SSBH
T ss_pred CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC----------CCch
Confidence 9999999862 12233333 3333 66799999998764211 1112
Q ss_pred ccchhhHHHHHHh-------hhcCCcEEEeccCeeecCCCC-------CchHHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 022578 127 SRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNY-------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 127 ~~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (295)
.|..+|...+.+. ...|+++..+.||.+..|... ............+..++ .-+..+
T Consensus 155 ~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~p 225 (258)
T d1iy8a_ 155 GYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS---------KRYGEA 225 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT---------CSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC---------CCCcCH
Confidence 3448999887765 356899999999998765210 00011122222222221 124669
Q ss_pred HHHHHHHHHHhcC--CCCCCceEEecCCcc
Q 022578 193 KDLARAFVQVLGN--EKASRQVFNISGEKY 220 (295)
Q Consensus 193 ~D~a~~i~~~~~~--~~~~~~~~~i~~~~~ 220 (295)
+|+|++++.++.+ ....|+.+.+.+|..
T Consensus 226 ~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 226 PEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 9999999999865 334788999998854
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.54 E-value=2e-14 Score=116.21 Aligned_cols=200 Identities=19% Similarity=0.219 Sum_probs=130.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||..+++.|+++|++|.+.+|++++..+. ..++.+...++..+.+|++|++++.+++++ ..+|+
T Consensus 7 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~-----~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 7 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAV-----ASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred cCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 79999999999999999999999999987663221 122334446788999999999988887765 27999
Q ss_pred EEEcccCC--------------------hhcHHHHH----HhCC---CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADEVEPIL----DALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~~~ll----~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||.. ..++..+. ..+. ...++|++||...+...+ ....|
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~----------~~~~Y 151 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP----------ELAVY 151 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------TBHHH
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc----------ccccc
Confidence 99999873 22333333 3322 345799999877532111 11224
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHH--cCCCcc----cCCCCCceeeeeeHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIP----IPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~i~~~D~ 195 (295)
..+|...+.+.+ .+|+++..+.||.+-.|. ...+..... .+.... -.........+..++|+
T Consensus 152 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peev 226 (255)
T d1gega_ 152 SSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDV 226 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHH
T ss_pred hhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH-----HhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHH
Confidence 489998887753 578999999999886541 111111111 011000 00000011124679999
Q ss_pred HHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 196 ARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 196 a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
|++++.++.+. ...|+.+.+.||-.
T Consensus 227 A~~v~fL~S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 227 AACVSYLASPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHHHHhCchhCCccCcEEEecCCEE
Confidence 99999998653 24688999988754
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.53 E-value=2.7e-14 Score=115.81 Aligned_cols=204 Identities=15% Similarity=0.179 Sum_probs=128.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||++-||.+++++|+++|++|++.+|+.....+.. ..++ .....++.++.+|++|++++++++++ .++|
T Consensus 10 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~----~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 85 (260)
T d1x1ta1 10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKV----RAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID 85 (260)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHH----HHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH----HHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence 799999999999999999999999999864421111 0111 22235788999999999999888865 3799
Q ss_pred EEEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..+ ++.++..++ +..++|++||...+...+ ....|
T Consensus 86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~----------~~~~Y 155 (260)
T d1x1ta1 86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA----------NKSAY 155 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TCHHH
T ss_pred EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccC----------Ccchh
Confidence 999999972 122 333444444 567999999987642211 12235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHH-c-CCCc-ccCCCCCceeeeeeHHHHHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-A-GRPI-PIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~i~~~D~a~~ 198 (295)
..+|...+.+.+ ..|+++..+.||.+-.+...... ........ . .... ..........-+..++|+|++
T Consensus 156 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~ 234 (260)
T d1x1ta1 156 VAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI-SALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT 234 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHHHH
T ss_pred hhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhh-hhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 599998887753 46899999999998776321100 00000000 0 0000 000000001234679999999
Q ss_pred HHHHhcCC--CCCCceEEecCCc
Q 022578 199 FVQVLGNE--KASRQVFNISGEK 219 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~ 219 (295)
++.++.+. ...|+.+.+.||-
T Consensus 235 v~fL~S~~a~~itG~~i~vDGG~ 257 (260)
T d1x1ta1 235 AVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhChhhCCCcCCEEEECcch
Confidence 99998653 3478899998873
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=4e-15 Score=120.35 Aligned_cols=205 Identities=16% Similarity=0.170 Sum_probs=132.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||++.||.++++.|+++|++|.+.+|+.++..+.. .++.+. ..++.++.+|+++++++++++++ ..+
T Consensus 9 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (254)
T d2gdza1 9 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCK-----AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL 83 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 799999999999999999999999999876632111 011111 24688899999999988887754 279
Q ss_pred cEEEEcccCChh----------------cHHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhh
Q 022578 74 DVVYDINGREAD----------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK 132 (295)
Q Consensus 74 d~vi~~a~~~~~----------------~~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k 132 (295)
|++||+|+.... .++..+..+. ...++|++||...+-.. .....|..+|
T Consensus 84 DilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~----------~~~~~Y~asK 153 (254)
T d2gdza1 84 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----------AQQPVYCASK 153 (254)
T ss_dssp CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------TTCHHHHHHH
T ss_pred CeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC----------CCccchHHHH
Confidence 999999997321 2333444443 13579999998764221 1112344889
Q ss_pred HHHHHHh---------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCccc---CCCCCceeeeeeHHHHHHHHH
Q 022578 133 LNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI---PGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 133 ~~~E~~~---------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~D~a~~i~ 200 (295)
...+.+. ...|+++..+.||.+-.+. ...+......+..... ..+......+..++|+|++++
T Consensus 154 aal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~ 228 (254)
T d2gdza1 154 HGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI-----LESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI 228 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH-----HHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh-----hhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 8776553 3468999999999886541 0000000000000000 000000112456899999999
Q ss_pred HHhcCCCCCCceEEecCCcccCHHH
Q 022578 201 QVLGNEKASRQVFNISGEKYVTFDG 225 (295)
Q Consensus 201 ~~~~~~~~~~~~~~i~~~~~~t~~e 225 (295)
.++.++...|+.+.+.++..+.++|
T Consensus 229 fL~s~~~itG~~i~VdGG~~~~~~~ 253 (254)
T d2gdza1 229 TLIEDDALNGAIMKITTSKGIHFQD 253 (254)
T ss_dssp HHHHCTTCSSCEEEEETTTEEEECC
T ss_pred HHHcCCCCCCCEEEECCCCeeeccc
Confidence 9998776789999999998766544
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.50 E-value=9.6e-14 Score=110.72 Aligned_cols=184 Identities=15% Similarity=0.195 Sum_probs=124.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh-HHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~ 79 (295)
|||++-||+.+++.|+++|++|++.+|+.+...+ .+.+++.+|+++. +.+.+.+. ++|++||+
T Consensus 10 TGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~--------------~~~~~~~~Dv~~~~~~~~~~~g--~iD~lVnn 73 (234)
T d1o5ia_ 10 LAASRGIGRAVADVLSQEGAEVTICARNEELLKR--------------SGHRYVVCDLRKDLDLLFEKVK--EVDILVLN 73 (234)
T ss_dssp ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------------TCSEEEECCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh--------------cCCcEEEcchHHHHHHHHHHhC--CCcEEEec
Confidence 7999999999999999999999999998655221 3457788999863 45555555 89999999
Q ss_pred ccCCh--------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhH
Q 022578 80 NGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL 133 (295)
Q Consensus 80 a~~~~--------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~ 133 (295)
||... .+ ++.++..++ +..++|++||........ ....|..+|.
T Consensus 74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~----------~~~~Y~asKa 143 (234)
T d1o5ia_ 74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE----------NLYTSNSARM 143 (234)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TBHHHHHHHH
T ss_pred ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccc----------ccccchhHHH
Confidence 98621 12 333444444 567899999877542211 1222448899
Q ss_pred HHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 022578 134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206 (295)
Q Consensus 134 ~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~ 206 (295)
..+.+.+ ..|+++..+.||.+-.+.............+.+..++ ..+..++|+|++++.++.+.
T Consensus 144 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl---------~R~~~pediA~~v~fL~S~~ 214 (234)
T d1o5ia_ 144 ALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM---------RRMAKPEEIASVVAFLCSEK 214 (234)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhChh
Confidence 8886653 5689999999999877642111111222233222222 12466999999999998653
Q ss_pred --CCCCceEEecCCc
Q 022578 207 --KASRQVFNISGEK 219 (295)
Q Consensus 207 --~~~~~~~~i~~~~ 219 (295)
...|+.+.+.+|-
T Consensus 215 s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 215 ASYLTGQTIVVDGGL 229 (234)
T ss_dssp GTTCCSCEEEESTTC
T ss_pred hcCCcCcEEEECccc
Confidence 2468899998874
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.50 E-value=4e-14 Score=115.34 Aligned_cols=197 Identities=15% Similarity=0.140 Sum_probs=132.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||..+++.|+++|++|++.+|+.+...+... + ......+.++.+|++|++++++++++ ..+|+
T Consensus 12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~-----~-l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 85 (268)
T d2bgka1 12 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN-----N-IGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 85 (268)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----H-HCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----H-hcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence 7999999999999999999999999998765321110 1 11124688899999999999888764 38999
Q ss_pred EEEcccCC----------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 76 VYDINGRE----------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 76 vi~~a~~~----------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
+||+||.. ..+ ++.++..+. +..++|++||...+.... ....
T Consensus 86 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~----------~~~~ 155 (268)
T d2bgka1 86 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GVSH 155 (268)
T ss_dssp EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TSCH
T ss_pred eccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc----------cccc
Confidence 99999851 112 333444443 566999999876542211 1122
Q ss_pred cc-hhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC---chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 128 ~~-~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
+| .+|...+.+.+ ..|+++..+.||.+-.|.... ............... + .+ .+..++|+|
T Consensus 156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~-~g------r~~~pedvA 227 (268)
T d2bgka1 156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-L-KG------TLLRAEDVA 227 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-S-CS------CCCCHHHHH
T ss_pred ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc-c-CC------CCcCHHHHH
Confidence 34 88999887753 478999999999998875321 111212121111111 1 11 245699999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCccc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
++++.++.+. ...|+.+.+.||-..
T Consensus 228 ~~v~fL~S~~s~~itGq~i~VDGG~t~ 254 (268)
T d2bgka1 228 DAVAYLAGDESKYVSGLNLVIDGGYTR 254 (268)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHhChhhCCccCceEEECcCccc
Confidence 9999998653 347899999998543
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.50 E-value=1.8e-13 Score=109.45 Aligned_cols=191 Identities=18% Similarity=0.256 Sum_probs=129.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC-----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~ 75 (295)
|||++.||..+++.|+++|++|++.+|+.++..+ ...+...++.++++|+++++++++++++. ++|+
T Consensus 11 tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 11 TGAASGIGRAALDLFAREGASLVAVDREERLLAE--------AVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 7999999999999999999999999998876322 12333467889999999999998877652 7999
Q ss_pred EEEcccCCh--------------------hcH----HHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 76 VYDINGREA--------------------DEV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 76 vi~~a~~~~--------------------~~~----~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+||+|+... .+. +.++..+.+...++.+|+.+... ......|..+
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~-----------~~~~~~Y~~s 151 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-----------AFGLAHYAAG 151 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-----------HHHHHHHHHC
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc-----------ccCccccchh
Confidence 999998631 122 22333344444555555544211 0011124489
Q ss_pred hHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 132 k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
|+..|.+.+ ..|+++..+.||.+-.+.... ......+...+..++. .+..++|+|+++..++.
T Consensus 152 K~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~-~~~~~~~~~~~~~p~~---------r~~~p~dva~~v~fL~S 221 (241)
T d2a4ka1 152 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPLG---------RAGRPEEVAQAALFLLS 221 (241)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTTC---------SCBCHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh-hhHhHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhc
Confidence 999888763 467999999999986653221 2233334444433321 23569999999999997
Q ss_pred CC--CCCCceEEecCCcc
Q 022578 205 NE--KASRQVFNISGEKY 220 (295)
Q Consensus 205 ~~--~~~~~~~~i~~~~~ 220 (295)
+. ...|+.+.+.+|..
T Consensus 222 ~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 222 EESAYITGQALYVDGGRS 239 (241)
T ss_dssp GGGTTCCSCEEEESTTTT
T ss_pred chhCCCcCceEEeCCCcc
Confidence 53 34788999988854
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.49 E-value=1.6e-13 Score=111.07 Aligned_cols=196 Identities=12% Similarity=0.097 Sum_probs=126.8
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+| -||.+++++|+++|++|.+.+|+...... ..+......+...+.+|++|+++++++++. .++
T Consensus 14 TGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (256)
T d1ulua_ 14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE------AEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL 87 (256)
T ss_dssp ESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH------HHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred ECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH------HHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence 78887 69999999999999999888877443111 111223335678899999999988887764 379
Q ss_pred cEEEEcccCCh------------------------hcHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA------------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~------------------------~~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+++... .+...+.+++. ...++|++||.......+ ..
T Consensus 88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~----------~~ 157 (256)
T d1ulua_ 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP----------KY 157 (256)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT----------TC
T ss_pred eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC----------Cc
Confidence 99999998621 12233333322 346899999877642211 11
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|...+.+.+ .+|+++..+.||.+..+.... .......+...+..|+. .+..++|+|+
T Consensus 158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA~ 228 (256)
T d1ulua_ 158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR---------RNITQEEVGN 228 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS---------SCCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence 234489999887753 478999999999988764322 11223333333333321 2355899999
Q ss_pred HHHHHhcCCC--CCCceEEecCCccc
Q 022578 198 AFVQVLGNEK--ASRQVFNISGEKYV 221 (295)
Q Consensus 198 ~i~~~~~~~~--~~~~~~~i~~~~~~ 221 (295)
+++.++.+.. ..|+.+.+.+|..+
T Consensus 229 ~v~fL~S~~s~~itG~~i~VDGG~~~ 254 (256)
T d1ulua_ 229 LGLFLLSPLASGITGEVVYVDAGYHI 254 (256)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHhCchhCCccCCeEEECcCEeC
Confidence 9999987532 47889999888543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1.4e-13 Score=110.43 Aligned_cols=191 Identities=13% Similarity=0.087 Sum_probs=130.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-CCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~d~vi~~ 79 (295)
|||++.||+.+++.|+++|++|++.+|++++..+... ..+++...+|+.+.+.++...+. ..+|++||+
T Consensus 12 TGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ 81 (245)
T d2ag5a1 12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV 81 (245)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------ccCCceeeeeccccccccccccccccceeEEec
Confidence 7999999999999999999999999998766432221 35788999999888777766654 389999999
Q ss_pred ccCC--------------------hhcHH----HHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCC-Cccchhh
Q 022578 80 NGRE--------------------ADEVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGK 132 (295)
Q Consensus 80 a~~~--------------------~~~~~----~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p-~~~~~~k 132 (295)
+|.. ..++. .++..+. +..++|++||...- ..+... ..|..+|
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~~~~Y~~sK 151 (245)
T d2ag5a1 82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVNRCVYSTTK 151 (245)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTTBHHHHHHH
T ss_pred ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccchhHHHHHH
Confidence 9872 12233 3333333 56699999986530 001112 2345999
Q ss_pred HHHHHHhh-------hcCCcEEEeccCeeecCCCC-----CchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 022578 133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV 200 (295)
Q Consensus 133 ~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~ 200 (295)
+..+.+.+ ..|+++..+.||.+-.|... ........+.+.+..++ ..+..++|+|+++.
T Consensus 152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedva~~v~ 222 (245)
T d2ag5a1 152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAEEIAMLCV 222 (245)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence 99888764 46899999999998876310 01111222333332222 13567999999999
Q ss_pred HHhcCC--CCCCceEEecCCcc
Q 022578 201 QVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 201 ~~~~~~--~~~~~~~~i~~~~~ 220 (295)
.++.+. ...|+.+.+.+|..
T Consensus 223 fL~s~~s~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 223 YLASDESAYVTGNPVIIDGGWS 244 (245)
T ss_dssp HHHSGGGTTCCSCEEEECTTGG
T ss_pred HHhChhhCCCcCceEEeCCCcC
Confidence 999753 34788999988753
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1.6e-14 Score=119.23 Aligned_cols=195 Identities=12% Similarity=0.183 Sum_probs=128.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-----hccCCeEEEEecCCChHHHHHhhhc-----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-----EFSSKILHLKGDRKDYDFVKSSLSA----- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~D~~~~~~~~~~~~~----- 70 (295)
|||++.||.++++.|+++|++|++.+|+.++..+.. .++. ....++..+.+|++|++++.+++++
T Consensus 18 TGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~-----~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 92 (297)
T d1yxma1 18 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAA-----DELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 92 (297)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 799999999999999999999999999876532111 0111 1124688999999999998887765
Q ss_pred CCCcEEEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 71 KGFDVVYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 71 ~~~d~vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
..+|++||+|+.. ..++ +.++..+. +..++|++|+....+. ..
T Consensus 93 G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~-----------~~ 161 (297)
T d1yxma1 93 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF-----------PL 161 (297)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-----------TT
T ss_pred CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc-----------cc
Confidence 3899999999862 2223 33444444 5567888776432111 11
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCC---chHHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
...|..+|...+.+.+ .+|+++..+.||.+..+.... .....+.+.... .+| ..-+..++|
T Consensus 162 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~----~~p-----lgR~g~ped 232 (297)
T d1yxma1 162 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ----KIP-----AKRIGVPEE 232 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGG----GST-----TSSCBCTHH
T ss_pred cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHh----cCC-----CCCCcCHHH
Confidence 2224489998887763 468999999999998763211 111111111111 111 112456899
Q ss_pred HHHHHHHHhcCC--CCCCceEEecCCcc
Q 022578 195 LARAFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 195 ~a~~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+|++++.++.+. ...|+.+.+.||..
T Consensus 233 vA~~v~fL~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 233 VSSVVCFLLSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence 999999999653 34789999999854
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.48 E-value=4e-14 Score=114.20 Aligned_cols=195 Identities=15% Similarity=0.167 Sum_probs=128.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.++++.|+++|++|++.+|+.+...+. ..+...+..++.+|+++.+++++++++ ..+|+
T Consensus 12 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL--------AAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 79999999999999999999999999987653211 123345688899999999888887765 38999
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||+||.. ..+ ++.++..++ +..++|++||...+.... ....|..
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~----------~~~~Y~a 153 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE----------QYAGYSA 153 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT----------TBHHHHH
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcc----------ccccccc
Confidence 99999972 112 344445455 557999999987642111 1123448
Q ss_pred hhHHHHHHhh-------h--cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 131 GKLNTESVLE-------S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 131 ~k~~~E~~~~-------~--~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
+|+..+.+.+ . +++++..+.||.+..+...........+........ ....-.+..++|+|++++.
T Consensus 154 sKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-----~~~~gr~~~pedvA~~v~f 228 (253)
T d1hxha_ 154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK-----LNRAGRAYMPERIAQLVLF 228 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTT-----TBTTCCEECHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCcc-----ccccCCCCCHHHHHHHHHH
Confidence 9998877653 2 358999999999876510000000000111111110 0111245779999999999
Q ss_pred HhcCC--CCCCceEEecCC
Q 022578 202 VLGNE--KASRQVFNISGE 218 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~ 218 (295)
++.+. ...|+.+++.++
T Consensus 229 L~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 229 LASDESSVMSGSELHADNS 247 (253)
T ss_dssp HHSGGGTTCCSCEEEESSS
T ss_pred HhChhhCCCcCcEEEECcc
Confidence 98653 347889999887
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.48 E-value=2.6e-13 Score=110.17 Aligned_cols=195 Identities=14% Similarity=0.137 Sum_probs=124.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc---cCCeEEEEecCCChHHHHHhhhc-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSA-----KG 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~-----~~ 72 (295)
|||++-||.+++++|+++|++|++.+|+.+...+.. .++.+. ..++.++.+|+++++++++++++ .+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 85 (264)
T d1spxa_ 11 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 85 (264)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 899999999999999999999999999876632211 111111 13588999999999988887765 38
Q ss_pred CcEEEEcccCC------------------------hhc----HHHHHHhCC-CCCcEEEeecccc-ccCCCCCCCCCCCC
Q 022578 73 FDVVYDINGRE------------------------ADE----VEPILDALP-NLEQFIYCSSAGV-YLKSDLLPHCETDT 122 (295)
Q Consensus 73 ~d~vi~~a~~~------------------------~~~----~~~ll~~~~-~~~~~i~~Ss~~v-~~~~~~~~~~e~~~ 122 (295)
+|++||+||.. ..+ ++.++..++ +..++|.++|... +..
T Consensus 86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~----------- 154 (264)
T d1spxa_ 86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA----------- 154 (264)
T ss_dssp CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC-----------
T ss_pred CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc-----------
Confidence 99999999852 112 233333344 4456666666442 211
Q ss_pred CCCCc-cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch--------HHHHHHHHHcCCCcccCCCCCce
Q 022578 123 VDPKS-RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--------EEWFFHRLKAGRPIPIPGSGIQV 186 (295)
Q Consensus 123 ~~p~~-~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 186 (295)
..... |..+|...+.+.+ ..|+++..+.||.+-.+...... .........+..|+
T Consensus 155 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------- 225 (264)
T d1spxa_ 155 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA--------- 225 (264)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT---------
T ss_pred CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC---------
Confidence 11122 4489998887753 46899999999999776321100 01111111111111
Q ss_pred eeeeeHHHHHHHHHHHhcCC---CCCCceEEecCCcc
Q 022578 187 TQLGHVKDLARAFVQVLGNE---KASRQVFNISGEKY 220 (295)
Q Consensus 187 ~~~i~~~D~a~~i~~~~~~~---~~~~~~~~i~~~~~ 220 (295)
.-+..++|+|++++.++.++ ...|+.+.+.||..
T Consensus 226 ~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 226 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence 12356899999999998632 25788999988754
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.47 E-value=4.2e-13 Score=108.66 Aligned_cols=196 Identities=19% Similarity=0.197 Sum_probs=128.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||.++++.|+++|++|++..|+..+..... ..++.+...++..+.+|++|++++++.+++ ..+|+
T Consensus 12 TGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~----~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi 87 (259)
T d1ja9a_ 12 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV----VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF 87 (259)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHH----HHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 799999999999999999999998777665522111 122334446789999999999888887754 38999
Q ss_pred EEEcccCCh--------------------hc----HHHHHHhCCCCCcEEEeecc-ccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGREA--------------------DE----VEPILDALPNLEQFIYCSSA-GVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~~--------------------~~----~~~ll~~~~~~~~~i~~Ss~-~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
+||++|... .+ ++.++..++...+++.++|. +.+... .....|..
T Consensus 88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~----------~~~~~Y~a 157 (259)
T d1ja9a_ 88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI----------PNHALYAG 157 (259)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC----------CSCHHHHH
T ss_pred EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCC----------CCchhHHH
Confidence 999998721 12 33344445533456666554 322111 11223448
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCC-----------C-CCchHHHHHHHHHcCCCcccCCCCCceeeeee
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL-----------N-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
+|...+.+.+ ..|+++..+.||.+-.+. . .......+...+.+..++. -+..
T Consensus 158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~ 228 (259)
T d1ja9a_ 158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK---------RIGY 228 (259)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS---------SCBC
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC---------CCcC
Confidence 9998887753 468999999999986531 0 1111223333333333321 2466
Q ss_pred HHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 022578 192 VKDLARAFVQVLGNEK--ASRQVFNISGEK 219 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~~--~~~~~~~i~~~~ 219 (295)
++|+|++++.++.+.. -.|+.+.+.+|.
T Consensus 229 p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 229 PADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 9999999999997643 478899998874
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.45 E-value=6.1e-14 Score=113.15 Aligned_cols=190 Identities=13% Similarity=0.081 Sum_probs=124.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||..+++.|+++|++|.+.+|+.+...+. ... ...+..+|+++.+++++++++ -.+|+
T Consensus 6 TGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~---------~~~--~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi 74 (252)
T d1zmta1 6 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL---------EAF--AETYPQLKPMSEQEPAELIEAVTSAYGQVDV 74 (252)
T ss_dssp SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH---------HHH--HHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------Hhh--hCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence 89999999999999999999999999876653211 111 122345677776555554433 27999
Q ss_pred EEEcccCCh---------------------hc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGREA---------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~~---------------------~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+||... .+ ++.++..++ +..++|++||...+.... ....|
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~----------~~~~Y 144 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK----------ELSTY 144 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT----------TCHHH
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc----------ccccc
Confidence 999987521 12 233333343 667999999987643211 11235
Q ss_pred chhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-------HHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 022578 129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD 194 (295)
Q Consensus 129 ~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (295)
..+|...+.+.+ .+|+++..+.||.+-.+...... .......+.+..++ + -+..++|
T Consensus 145 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl---~------R~g~ped 215 (252)
T d1zmta1 145 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL---Q------RLGTQKE 215 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS---S------SCBCHHH
T ss_pred ccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC---C------CCcCHHH
Confidence 599998887753 57899999999999876432111 11122333332222 1 2356999
Q ss_pred HHHHHHHHhcCCC--CCCceEEecCCcc
Q 022578 195 LARAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 195 ~a~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
+|++++.++.+.. ..|+.+.+.||-.
T Consensus 216 vA~~v~fL~S~~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 216 LGELVAFLASGSCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp HHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred HHHHHHHHhCchhcCCcCCeEEECCCce
Confidence 9999999997643 4688999988853
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.44 E-value=2.2e-13 Score=108.84 Aligned_cols=173 Identities=13% Similarity=0.149 Sum_probs=120.6
Q ss_pred CCcCCcchHHHHHHHHHCCCe-------EEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQ-------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--- 70 (295)
|||++-||.++++.|+++|++ |...+|+.+...+. ..++.+...++.++.+|++|++++.+++++
T Consensus 7 TGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~-----~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 7 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKI-----SLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHH-----HHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 799999999999999999987 88888887663221 112233345688999999999988887765
Q ss_pred --CCCcEEEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCC
Q 022578 71 --KGFDVVYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (295)
Q Consensus 71 --~~~d~vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~ 122 (295)
..+|++||+||.. ..+ ++.++..++ +..++|++||...+...+
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~--------- 152 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR--------- 152 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCC---------
Confidence 2799999999872 222 344445554 667999999987643211
Q ss_pred CCCCccchhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 022578 123 VDPKSRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195 (295)
Q Consensus 123 ~~p~~~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 195 (295)
....|..+|...+.+. +..|+++..+.||.+-.+.... + ..+....+..++|+
T Consensus 153 -~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------------~----~~~~~~~~~~Pedv 212 (240)
T d2bd0a1 153 -HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------------V----DDEMQALMMMPEDI 212 (240)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------------C----CSTTGGGSBCHHHH
T ss_pred -CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------------c----CHhhHhcCCCHHHH
Confidence 1223458998887665 3478999999999987763110 0 00111234568999
Q ss_pred HHHHHHHhcCCC
Q 022578 196 ARAFVQVLGNEK 207 (295)
Q Consensus 196 a~~i~~~~~~~~ 207 (295)
|++++.++.++.
T Consensus 213 A~~v~~l~s~~~ 224 (240)
T d2bd0a1 213 AAPVVQAYLQPS 224 (240)
T ss_dssp HHHHHHHHTSCT
T ss_pred HHHHHHHHcCCc
Confidence 999999988754
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.44 E-value=2.2e-12 Score=105.16 Aligned_cols=197 Identities=17% Similarity=0.133 Sum_probs=129.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||..+++.|+++|++|++.+|+.++..+.. ..++.+...++.++.+|++|++++.+.+++ ..+|+
T Consensus 24 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~----~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi 99 (272)
T d1g0oa_ 24 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI 99 (272)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHH----HHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence 799999999999999999999999998865522111 112334446789999999999888887765 38899
Q ss_pred EEEcccCCh--------------------hc----HHHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCCCc-cch
Q 022578 76 VYDINGREA--------------------DE----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHK 130 (295)
Q Consensus 76 vi~~a~~~~--------------------~~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~-~~~ 130 (295)
+||+++... .+ .+.++..+....+.++++|...... +..... |..
T Consensus 100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~----------~~~~~~~Y~a 169 (272)
T d1g0oa_ 100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------AVPKHAVYSG 169 (272)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------SCSSCHHHHH
T ss_pred cccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccc----------cccchhhHHH
Confidence 999998731 12 3444444554467888877543111 111223 448
Q ss_pred hhHHHHHHhh-------hcCCcEEEeccCeeecCCC-----------CCchHHHHHH-HHHcCCCcccCCCCCceeeeee
Q 022578 131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLN-----------YNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 131 ~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~ 191 (295)
+|+..+.+.+ ..|+++..|.||.+-.+.. .......... ......++ .-+..
T Consensus 170 sKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~~~ 240 (272)
T d1g0oa_ 170 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL---------RRVGL 240 (272)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT---------CSCBC
T ss_pred HHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC---------CCCcC
Confidence 9998887763 4789999999999865410 0000111111 11111111 13467
Q ss_pred HHHHHHHHHHHhcCCC--CCCceEEecCCcc
Q 022578 192 VKDLARAFVQVLGNEK--ASRQVFNISGEKY 220 (295)
Q Consensus 192 ~~D~a~~i~~~~~~~~--~~~~~~~i~~~~~ 220 (295)
++|+|+++..++.+.. ..|+.+.+.||..
T Consensus 241 peevA~~v~fL~s~~s~~itG~~i~vDGG~~ 271 (272)
T d1g0oa_ 241 PIDIARVVCFLASNDGGWVTGKVIGIDGGAC 271 (272)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence 9999999999997533 4788999988853
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.44 E-value=2.6e-13 Score=109.95 Aligned_cols=203 Identities=14% Similarity=0.198 Sum_probs=131.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||..+++.|+++|++|++.+|+.++..+... ....+...++..+.+|+++++++++++++ ..+|+
T Consensus 15 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 90 (260)
T d1h5qa_ 15 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE----KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG 90 (260)
T ss_dssp ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH----HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence 7999999999999999999999999999876432110 11122345789999999999998887754 37999
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC---CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+||+|+.. ..+ ++.++..+. ...+++..|+...+....... ........|
T Consensus 91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~---~~~~~~~~Y 167 (260)
T d1h5qa_ 91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL---NGSLTQVFY 167 (260)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET---TEECSCHHH
T ss_pred ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc---ccCccccch
Confidence 99999862 122 233334432 444566666655432111000 000112234
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+. ...|+++..+.||.+-.+.... ......+......++. -+..++|+|++++.
T Consensus 168 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~---------R~g~pedvA~~v~f 237 (260)
T d1h5qa_ 168 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIPLN---------RFAQPEEMTGQAIL 237 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTTS---------SCBCGGGGHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc-cCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHH
Confidence 58999888765 3578999999999987663211 1223334443433321 23558999999999
Q ss_pred HhcCC--CCCCceEEecCCcc
Q 022578 202 VLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 202 ~~~~~--~~~~~~~~i~~~~~ 220 (295)
++.+. ...|+.+.+.||..
T Consensus 238 L~S~~s~~itG~~i~VDGG~~ 258 (260)
T d1h5qa_ 238 LLSDHATYMTGGEYFIDGGQL 258 (260)
T ss_dssp HHSGGGTTCCSCEEEECTTGG
T ss_pred HhcchhCCCcCceEEECCCee
Confidence 98653 24788999988853
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.42 E-value=3.7e-13 Score=111.14 Aligned_cols=196 Identities=16% Similarity=0.165 Sum_probs=127.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||+|.||.+++++|+++|++|++.+|+..+..+.. .++ .+....+..+.+|+++.+++..+++. .++|
T Consensus 31 TGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~-----~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 105 (294)
T d1w6ua_ 31 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-----EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 105 (294)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccc
Confidence 799999999999999999999999999976633211 111 22235688999999999988776654 3899
Q ss_pred EEEEcccCChh--------------------cHHHHHHh----C--C-CCCcEEEeeccccccCCCCCCCCCCCCCCCCc
Q 022578 75 VVYDINGREAD--------------------EVEPILDA----L--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS 127 (295)
Q Consensus 75 ~vi~~a~~~~~--------------------~~~~ll~~----~--~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~ 127 (295)
++||++|.... ....+... + . ....++.+|+....... .....
T Consensus 106 ilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~----------~~~~~ 175 (294)
T d1w6ua_ 106 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS----------GFVVP 175 (294)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----------TTCHH
T ss_pred hhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc----------cccch
Confidence 99999987311 11111111 1 1 44466777765542211 11223
Q ss_pred cchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc--hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 022578 128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 198 (295)
Q Consensus 128 ~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 198 (295)
|..+|...+.+.+ ..|+++..+.||.+-.+..... ..........+..++. .+..++|+|++
T Consensus 176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~ 246 (294)
T d1w6ua_ 176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------RLGTVEELANL 246 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------SCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------CCCCHHHHHHH
Confidence 5589999887763 4689999999999987642110 0111223332322221 23568999999
Q ss_pred HHHHhcCC--CCCCceEEecCCcc
Q 022578 199 FVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 199 i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
+..++.+. ...|+.+.+.||..
T Consensus 247 v~fL~sd~s~~itG~~i~vDGG~~ 270 (294)
T d1w6ua_ 247 AAFLCSDYASWINGAVIKFDGGEE 270 (294)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTHH
T ss_pred HHHHhCchhcCCCCcEEEECCChh
Confidence 99998653 34789999998854
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.41 E-value=8e-13 Score=107.78 Aligned_cols=198 Identities=16% Similarity=0.143 Sum_probs=127.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc---cCCeEEEEecCCChHHHHHhhhc-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSA-----KG 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~-----~~ 72 (295)
|||++.||.++++.|+++|++|++.+|+.++..+.. .++.+. ..++..+.+|+++++++++++++ ..
T Consensus 10 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 84 (274)
T d1xhla_ 10 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK 84 (274)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 899999999999999999999999999876532111 111111 13688999999999988887765 27
Q ss_pred CcEEEEcccCC----------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 73 FDVVYDINGRE----------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 73 ~d~vi~~a~~~----------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
+|++||+||.. ..+ ++.++..+. +..+++++||........ .
T Consensus 85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~----------~ 154 (274)
T d1xhla_ 85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS----------G 154 (274)
T ss_dssp CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT----------T
T ss_pred ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCC----------C
Confidence 99999998852 112 233333343 455777777765422111 1
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCC----CC-chHHHHHHHHHcC-CCcccCCCCCceeeeee
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YN-PVEEWFFHRLKAG-RPIPIPGSGIQVTQLGH 191 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 191 (295)
...|..+|...+.+.+ ..|+++..+.||.+-.|.. .. .....+......- ..+++ .-+..
T Consensus 155 ~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-------gR~g~ 227 (274)
T d1xhla_ 155 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-------GHCGK 227 (274)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SSCBC
T ss_pred CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-------CCCcC
Confidence 1224489998887753 4789999999999977621 00 0111111111111 11221 12356
Q ss_pred HHHHHHHHHHHhcC---CCCCCceEEecCCcc
Q 022578 192 VKDLARAFVQVLGN---EKASRQVFNISGEKY 220 (295)
Q Consensus 192 ~~D~a~~i~~~~~~---~~~~~~~~~i~~~~~ 220 (295)
++|+|++++.++.. ....|+.+.+.||..
T Consensus 228 pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 228 PEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 99999999999863 235789999999854
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.40 E-value=1.3e-12 Score=105.76 Aligned_cols=182 Identities=16% Similarity=0.124 Sum_probs=121.6
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcC----CCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~ 75 (295)
|||+|.||..++++|+++|+ +|+++.|+........ ....++.+...++.++.+|++|.+++..+++.. .+|.
T Consensus 15 TGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~--~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~ 92 (259)
T d2fr1a1 15 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAG--ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA 92 (259)
T ss_dssp ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHH--HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred ECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHH--HHHHHHHhccccccccccccchHHHHHHhhccccccccccc
Confidence 79999999999999999998 5787888643311100 011122333457999999999999999888753 5899
Q ss_pred EEEcccC--------------------ChhcHHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhH
Q 022578 76 VYDINGR--------------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL 133 (295)
Q Consensus 76 vi~~a~~--------------------~~~~~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~ 133 (295)
|||+++. |..+..++.+++. +..++|++||....-+..+ ...|..+|.
T Consensus 93 vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~----------~~~YaAaka 162 (259)
T d2fr1a1 93 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG----------LGGYAPGNA 162 (259)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT----------CTTTHHHHH
T ss_pred cccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc----------cHHHHHHHH
Confidence 9999987 2334666777765 6679999999776433221 123558888
Q ss_pred HHHHHh---hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 022578 134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208 (295)
Q Consensus 134 ~~E~~~---~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~~~ 208 (295)
..+.+. +..|++++.+.||.+.+++..... . .. .+. . .-...+..+++++++..++.++..
T Consensus 163 ~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~----~----~~-~~~--~---~G~~~~~~~~~~~~l~~~l~~~~~ 226 (259)
T d2fr1a1 163 YLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP----V----AD-RFR--R---HGVIEMPPETACRALQNALDRAEV 226 (259)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECCBC---------------------CT--T---TTEECBCHHHHHHHHHHHHHTTCS
T ss_pred hHHHHHHHHHhCCCCEEECCCCcccCCccccch----H----HH-HHH--h---cCCCCCCHHHHHHHHHHHHhCCCc
Confidence 887665 467999999999988776431110 0 01 111 1 113457899999999999987654
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.40 E-value=2.4e-13 Score=110.86 Aligned_cols=199 Identities=17% Similarity=0.175 Sum_probs=126.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc---cCCeEEEEecCCChHHHHHhhhc-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSA-----KG 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~-----~~ 72 (295)
|||++-||.++++.|+++|++|++.+|+.++..+.. .++.+. ..++..+.+|++|++++++++++ .+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 85 (272)
T d1xkqa_ 11 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK 85 (272)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred eCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 899999999999999999999999999876532111 111111 13588999999999988887765 28
Q ss_pred CcEEEEcccCCh------------------------hcH----HHHHHhCC-CCCcEEEeec-cccccCCCCCCCCCCCC
Q 022578 73 FDVVYDINGREA------------------------DEV----EPILDALP-NLEQFIYCSS-AGVYLKSDLLPHCETDT 122 (295)
Q Consensus 73 ~d~vi~~a~~~~------------------------~~~----~~ll~~~~-~~~~~i~~Ss-~~v~~~~~~~~~~e~~~ 122 (295)
+|++||+||... .++ +.++..++ +...+|.++| .+.....
T Consensus 86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~---------- 155 (272)
T d1xkqa_ 86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ---------- 155 (272)
T ss_dssp CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC----------
T ss_pred ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCC----------
Confidence 999999998621 122 22333333 3345565555 3322111
Q ss_pred CCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCC----CC-chHHHHHHHHHc-CCCcccCCCCCceeee
Q 022578 123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YN-PVEEWFFHRLKA-GRPIPIPGSGIQVTQL 189 (295)
Q Consensus 123 ~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~----~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 189 (295)
.....|..+|+..+.+.+ .+|+++..+.||.+-.+.. .. .....+...... ...+++ + -+
T Consensus 156 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-g------R~ 228 (272)
T d1xkqa_ 156 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-G------AA 228 (272)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-S------SC
T ss_pred CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-C------CC
Confidence 111224489998887753 4689999999999876521 00 011111111111 111221 1 24
Q ss_pred eeHHHHHHHHHHHhcCC---CCCCceEEecCCccc
Q 022578 190 GHVKDLARAFVQVLGNE---KASRQVFNISGEKYV 221 (295)
Q Consensus 190 i~~~D~a~~i~~~~~~~---~~~~~~~~i~~~~~~ 221 (295)
..++|+|++++.++.++ ...|+.+.+.||..+
T Consensus 229 g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 229 GKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred cCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 66999999999998642 247899999998654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.39 E-value=1.6e-13 Score=112.09 Aligned_cols=192 Identities=19% Similarity=0.195 Sum_probs=126.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||+++++.|+++|++|++.+|++++..+ ...+...++..+.+|+++.+++++++++ ..+|+
T Consensus 11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~--------~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi 82 (276)
T d1bdba_ 11 TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE--------LETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT 82 (276)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence 7999999999999999999999999998766321 1123346789999999999888887754 38999
Q ss_pred EEEcccCC-------------------------hhc----HHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 76 VYDINGRE-------------------------ADE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 76 vi~~a~~~-------------------------~~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
+||+||.. ..+ ++.++..++ +..++|++||...+-... ..
T Consensus 83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~----------~~ 152 (276)
T d1bdba_ 83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNG----------GG 152 (276)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTS----------SC
T ss_pred ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCC----------CC
Confidence 99999852 111 233334443 346888888866432111 11
Q ss_pred CccchhhHHHHHHhh------hcCCcEEEeccCeeecCCCCCch---------HHHHHHHHHcCCCcccCCCCCceeeee
Q 022578 126 KSRHKGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPV---------EEWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~------~~~~~~~i~R~~~i~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
..|..+|+..+.+.+ ..++++..+.||.+-.+-..... ...+.+.+....|+. -+.
T Consensus 153 ~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~g 223 (276)
T d1bdba_ 153 PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG---------RMP 223 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS---------SCC
T ss_pred chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC---------CCc
Confidence 234589998887653 23599999999998765321110 011112222222221 234
Q ss_pred eHHHHHHHHHHHhcC---CCCCCceEEecCCc
Q 022578 191 HVKDLARAFVQVLGN---EKASRQVFNISGEK 219 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~---~~~~~~~~~i~~~~ 219 (295)
.++|+|++++.++.. ....|+.+++.||-
T Consensus 224 ~peeva~~v~fL~S~~~a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 224 EVEEYTGAYVFFATRGDAAPATGALLNYDGGL 255 (276)
T ss_dssp CGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred CHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence 589999999988753 23578999998874
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=9.5e-13 Score=106.25 Aligned_cols=180 Identities=17% Similarity=0.147 Sum_probs=116.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||++-||.++++.|+++|++|++.+|++++..+.. .++.+. ..++.++++|+++++++.++++. .++
T Consensus 16 TGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i 90 (257)
T d1xg5a_ 16 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV 90 (257)
T ss_dssp ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 799999999999999999999999999876633211 112221 13678899999999988887755 379
Q ss_pred cEEEEcccCCh--------------------hc----HHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREA--------------------DE----VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~--------------------~~----~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+||... .+ ++.++..+. +..++|++||.+.+... +...
T Consensus 91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---------p~~~ 161 (257)
T d1xg5a_ 91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------PLSV 161 (257)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------SCGG
T ss_pred CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC---------CCcc
Confidence 99999998731 12 222333322 35699999997753211 1111
Q ss_pred Cc-cchhhHHHHHHhh---------hcCCcEEEeccCeeecCCC---CCchHHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 022578 126 KS-RHKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 192 (295)
Q Consensus 126 ~~-~~~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (295)
.. |..+|...+.+.+ ..++++..+-||.+-.+.. ........... . ....++.+
T Consensus 162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~------~-------~~~r~~~p 228 (257)
T d1xg5a_ 162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT------Y-------EQMKCLKP 228 (257)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH------H-------C---CBCH
T ss_pred cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhc------C-------CCCCCcCH
Confidence 22 4488988876642 3578999999987765421 00001111110 1 11235679
Q ss_pred HHHHHHHHHHhcCCC
Q 022578 193 KDLARAFVQVLGNEK 207 (295)
Q Consensus 193 ~D~a~~i~~~~~~~~ 207 (295)
+|+|++++.++.++.
T Consensus 229 edvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 229 EDVAEAVIYVLSTPA 243 (257)
T ss_dssp HHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHhCChh
Confidence 999999999987653
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.34 E-value=3.1e-12 Score=105.53 Aligned_cols=207 Identities=11% Similarity=0.069 Sum_probs=132.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCC-chhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-DQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||++.||+.+++.|+++|++|++.+|+.+.......... .....+.........+|+.+.++++++++. .++|
T Consensus 13 TGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iD 92 (302)
T d1gz6a_ 13 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID 92 (302)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCC
Confidence 8999999999999999999999999988655321111100 011122223445667888887666555543 2799
Q ss_pred EEEEcccCC--------------------hhc----HHHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~----~~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
++||+||.. ..+ ++.++..++ +..++|++||...+.... ....|
T Consensus 93 iLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~----------~~~~Y 162 (302)
T d1gz6a_ 93 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF----------GQANY 162 (302)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------TCHHH
T ss_pred EEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC----------CcHHH
Confidence 999999972 222 333444444 667999999977542211 12335
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
..+|...+.+. ..+|+++..+.||.+-.+... ... +.....+.++|+|.+++.
T Consensus 163 ~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~-~~~-------------------~~~~~~~~PedvA~~v~f 222 (302)
T d1gz6a_ 163 SAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTET-VMP-------------------EDLVEALKPEYVAPLVLW 222 (302)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGG-GSC-------------------HHHHHHSCGGGTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhh-cCc-------------------HhhHhcCCHHHHHHHHHH
Confidence 59999888775 357899999999875332110 000 011223457899999999
Q ss_pred HhcCC-CCCCceEEecCC-------------------cccCHHHHHHHHHHHhCCC
Q 022578 202 VLGNE-KASRQVFNISGE-------------------KYVTFDGLARACAKVTGLL 237 (295)
Q Consensus 202 ~~~~~-~~~~~~~~i~~~-------------------~~~t~~e~~~~i~~~~g~~ 237 (295)
++.+. ...|+.+.+.+| .+.|.+++++.+.+.....
T Consensus 223 L~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~ 278 (302)
T d1gz6a_ 223 LCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS 278 (302)
T ss_dssp HTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred HcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence 88643 235666666443 3468888888888887654
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=5.8e-13 Score=106.52 Aligned_cols=171 Identities=15% Similarity=0.144 Sum_probs=116.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++-||++++++|+++|++|++.+|+.++..+. ..++.+...++..+.+|++|++++..+++. ..+|+
T Consensus 13 TGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~-----~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi 87 (244)
T d1yb1a_ 13 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEET-----AAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI 87 (244)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence 79999999999999999999999999988763222 122334456789999999999988887754 37999
Q ss_pred EEEcccCC--------------------hhcH----HHHHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccc
Q 022578 76 VYDINGRE--------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH 129 (295)
Q Consensus 76 vi~~a~~~--------------------~~~~----~~ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~ 129 (295)
+||++|.. ..+. +.++..+. +..++|++||...+.... ....|.
T Consensus 88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~----------~~~~Y~ 157 (244)
T d1yb1a_ 88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP----------FLLAYC 157 (244)
T ss_dssp EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH----------HHHHHH
T ss_pred eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCC----------CcHHHH
Confidence 99999872 2223 33444444 566899999987642110 011244
Q ss_pred hhhHHHHHHhh-------h---cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 130 KGKLNTESVLE-------S---KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 130 ~~k~~~E~~~~-------~---~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
.+|+..+.+.+ . .|++++.+.||.+-.+..... .. .....+.++|+|+.+
T Consensus 158 asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~-------------~~-------~~~~~~~pe~va~~i 217 (244)
T d1yb1a_ 158 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-------------ST-------SLGPTLEPEEVVNRL 217 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-------------HH-------HHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc-------------Cc-------cccCCCCHHHHHHHH
Confidence 89998776652 1 478999999998755422110 00 111234689999999
Q ss_pred HHHhcCC
Q 022578 200 VQVLGNE 206 (295)
Q Consensus 200 ~~~~~~~ 206 (295)
+..+..+
T Consensus 218 ~~~~~~~ 224 (244)
T d1yb1a_ 218 MHGILTE 224 (244)
T ss_dssp HHHHHTT
T ss_pred HHHHhcC
Confidence 8877654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.31 E-value=1.6e-12 Score=104.72 Aligned_cols=189 Identities=16% Similarity=0.081 Sum_probs=123.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--ccCCeEEEEecCC-ChHHHHHhhhc-----CC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRK-DYDFVKSSLSA-----KG 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~-~~~~~~~~~~~-----~~ 72 (295)
|||++.||..++++|+++|.+|+++.|+.+...+. .++.. ...++.++.+|++ +.+++.+++++ .+
T Consensus 11 TGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~ 84 (254)
T d1sbya1 11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL------AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT 84 (254)
T ss_dssp ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH------HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred ecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH------HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCC
Confidence 79999999999999999999999998887653211 11111 1246888999998 55556555543 37
Q ss_pred CcEEEEcccCC------------hhc----HHHHHHhCC-----CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchh
Q 022578 73 FDVVYDINGRE------------ADE----VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG 131 (295)
Q Consensus 73 ~d~vi~~a~~~------------~~~----~~~ll~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~ 131 (295)
+|++||+||.. ..+ ++.++..+. ...++|++||...+... .....|..+
T Consensus 85 iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~----------~~~~~Y~as 154 (254)
T d1sbya1 85 VDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI----------HQVPVYSAS 154 (254)
T ss_dssp CCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------TTSHHHHHH
T ss_pred CCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC----------CCCHHHHHH
Confidence 99999999972 222 333444443 23679999998764221 112235589
Q ss_pred hHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcC----CCc-ccCCCCCceeeeeeHHHHHHHH
Q 022578 132 KLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG----RPI-PIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 132 k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~i~~~D~a~~i 199 (295)
|.....+. ...|+++..+.||.+..+- .+..... +.+ ..+ ..+.....+++|+++
T Consensus 155 Kaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~---------~~~~~~~~~~~~~~~~~~----~~~~~~~~e~va~~~ 221 (254)
T d1sbya1 155 KAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL---------VHTFNSWLDVEPRVAELL----LSHPTQTSEQCGQNF 221 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH---------HHSCCCGGGSCTTHHHHH----TTSCCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc---------ccccccchhHHHHHHhcc----ccCCCCCHHHHHHHH
Confidence 99887665 3578999999999998761 1100000 000 000 012335799999999
Q ss_pred HHHhcCCCCCCceEEecCCc
Q 022578 200 VQVLGNEKASRQVFNISGEK 219 (295)
Q Consensus 200 ~~~~~~~~~~~~~~~i~~~~ 219 (295)
+.++... ..|.++.+.++.
T Consensus 222 ~~~~~~~-~tG~vi~vdgG~ 240 (254)
T d1sbya1 222 VKAIEAN-KNGAIWKLDLGT 240 (254)
T ss_dssp HHHHHHC-CTTCEEEEETTE
T ss_pred HHhhhCC-CCCCEEEECCCE
Confidence 9888765 368889998874
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.31 E-value=2.2e-11 Score=98.35 Aligned_cols=196 Identities=14% Similarity=0.090 Sum_probs=128.7
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+| -||.++++.|+++|++|++.+|+.+... . ..++.........+..|..+..++...+.. ..+
T Consensus 11 TGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (258)
T d1qsga_ 11 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG-R-----VEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF 84 (258)
T ss_dssp CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH-H-----HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred ECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH-H-----HHHHHhhcCCcceeecccchHHHHHHHHHHhhhccccc
Confidence 79998 6889999999999999999999854311 1 112333345678889999998777766643 377
Q ss_pred cEEEEcccCChh-------------------------cHHHHHHhCC----CCCcEEEeeccccccCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD 124 (295)
Q Consensus 74 d~vi~~a~~~~~-------------------------~~~~ll~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~ 124 (295)
|++||+++.... ....+..++. +...+|++||....... +.
T Consensus 85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~----------~~ 154 (258)
T d1qsga_ 85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI----------PN 154 (258)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------TT
T ss_pred ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC----------CC
Confidence 999999876311 1222333322 44568888987653111 11
Q ss_pred CCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCc-hHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 022578 125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196 (295)
Q Consensus 125 p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 196 (295)
...|..+|...+.+.+ .+|+++..++||.+..+..... .............++ + -+..++|+|
T Consensus 155 ~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---~------R~~~peeia 225 (258)
T d1qsga_ 155 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---R------RTVTIEDVG 225 (258)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---S------SCCCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCC---C------CCcCHHHHH
Confidence 1235599999988764 4689999999999987754221 122233333222222 1 235699999
Q ss_pred HHHHHHhcCC--CCCCceEEecCCccc
Q 022578 197 RAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 197 ~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
+++..++.+. ...|+.+.+.+|..+
T Consensus 226 ~~v~fL~s~~s~~itG~~i~vDGG~~i 252 (258)
T d1qsga_ 226 NSAAFLCSDLSAGISGEVVHVDGGFSI 252 (258)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHhCchhcCccCceEEECcCHHH
Confidence 9999998653 357889999988543
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.25 E-value=6.2e-11 Score=94.54 Aligned_cols=184 Identities=16% Similarity=0.154 Sum_probs=120.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc----CCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v 76 (295)
|||++.||+++++.|+++|++|++.+|+.+. .+....++|+.+......+... ...+.+
T Consensus 7 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 69 (241)
T d1uaya_ 7 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV 69 (241)
T ss_dssp ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence 7999999999999999999999999998765 3566788999887665554432 355555
Q ss_pred EEcccCC------------------------hhc----HHHHHHh------CC--CCCcEEEeeccccccCCCCCCCCCC
Q 022578 77 YDINGRE------------------------ADE----VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCET 120 (295)
Q Consensus 77 i~~a~~~------------------------~~~----~~~ll~~------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~ 120 (295)
++.++.. ... ++.++.. +. +..++|++||...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~------- 142 (241)
T d1uaya_ 70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI------- 142 (241)
T ss_dssp EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-------
Confidence 5554331 011 1222222 11 445899999987653221
Q ss_pred CCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 022578 121 DTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193 (295)
Q Consensus 121 ~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (295)
....|..+|+..+.+.+ .+|+++..+.||.+..+...... ...........+. .+ -+..++
T Consensus 143 ---~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~--~~------R~g~pe 210 (241)
T d1uaya_ 143 ---GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP-EKAKASLAAQVPF--PP------RLGRPE 210 (241)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC-HHHHHHHHTTCCS--SC------SCCCHH
T ss_pred ---CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh-hhHHHHHHhcCCC--CC------CCcCHH
Confidence 12335599999887763 47899999999998765321111 1122222222221 11 235699
Q ss_pred HHHHHHHHHhcCCCCCCceEEecCCcc
Q 022578 194 DLARAFVQVLGNEKASRQVFNISGEKY 220 (295)
Q Consensus 194 D~a~~i~~~~~~~~~~~~~~~i~~~~~ 220 (295)
|+|++++.++......|+.+.+.||-.
T Consensus 211 dvA~~v~fL~s~~~iTG~~i~VDGG~~ 237 (241)
T d1uaya_ 211 EYAALVLHILENPMLNGEVVRLDGALR 237 (241)
T ss_dssp HHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCccc
Confidence 999999999886656789999988754
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=1.4e-10 Score=92.95 Aligned_cols=188 Identities=15% Similarity=0.176 Sum_probs=120.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.+++++|+++|++|++.+|+.+...+ ...+...+.....+|..+.+.++..... ...|.
T Consensus 11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T d2o23a1 11 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--------QAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 82 (248)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------HHHHhCCCcccccccccccccccccccccccccccccc
Confidence 7999999999999999999999999999876322 2233346788899999987766554432 36888
Q ss_pred EEEcccCC--------------------------hhcHHHHHHhC----C--------CCCcEEEeeccccccCCCCCCC
Q 022578 76 VYDINGRE--------------------------ADEVEPILDAL----P--------NLEQFIYCSSAGVYLKSDLLPH 117 (295)
Q Consensus 76 vi~~a~~~--------------------------~~~~~~ll~~~----~--------~~~~~i~~Ss~~v~~~~~~~~~ 117 (295)
+++.++.+ ..++.++..++ . +..++|++||...+....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~---- 158 (248)
T d2o23a1 83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV---- 158 (248)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT----
T ss_pred cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCC----
Confidence 88876541 11222333321 1 234799999987653211
Q ss_pred CCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeee
Q 022578 118 CETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG 190 (295)
Q Consensus 118 ~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (295)
....|..+|...+.+.+ .+|+++..+.||.+..+.... ..........+..+ +.+ -+.
T Consensus 159 ------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~p--l~~------R~g 223 (248)
T d2o23a1 159 ------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVP--FPS------RLG 223 (248)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCS--SSC------SCB
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc-CCHHHHHHHHhcCC--CCC------CCc
Confidence 11234599999988763 468999999999987763211 11111122222211 111 245
Q ss_pred eHHHHHHHHHHHhcCCCCCCceEEe
Q 022578 191 HVKDLARAFVQVLGNEKASRQVFNI 215 (295)
Q Consensus 191 ~~~D~a~~i~~~~~~~~~~~~~~~i 215 (295)
.++|+|++++.++..+...|+.+++
T Consensus 224 ~peevA~~v~fL~s~~~itGq~I~v 248 (248)
T d2o23a1 224 DPAEYAHLVQAIIENPFLNGEVIRL 248 (248)
T ss_dssp CHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred CHHHHHHHHHHHHhCCCCCceEeEC
Confidence 7999999999998765456766654
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=1.1e-11 Score=101.52 Aligned_cols=196 Identities=14% Similarity=0.103 Sum_probs=118.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEe---cCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc---CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFT---RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~---r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~~~d 74 (295)
|||++.||.++++.|+++|.+|+.+. |+......... ...++.....++..+.+|++|.+++..++++ ..+|
T Consensus 8 TGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~id 85 (285)
T d1jtva_ 8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE--AARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVD 85 (285)
T ss_dssp SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH--HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCS
T ss_pred ccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHH--HHHHHhccCCceEEEeccccchHhhhhhhhhccccchh
Confidence 79999999999999999998765544 43322110000 0001112235789999999999999888765 3799
Q ss_pred EEEEcccCC--------------------hhcHHH----HHHhCC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 75 VVYDINGRE--------------------ADEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~----ll~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
+++|+++.. ..++.+ ++..+. +..++|++||...+...+ ....|
T Consensus 86 ilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~----------~~~~Y 155 (285)
T d1jtva_ 86 VLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP----------FNDVY 155 (285)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT----------TCHHH
T ss_pred hhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCC----------CchHH
Confidence 999999862 223333 334444 667999999987542211 11224
Q ss_pred chhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCch--H------------HHHHHHHHcCCCcccCCCCCcee
Q 022578 129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV--E------------EWFFHRLKAGRPIPIPGSGIQVT 187 (295)
Q Consensus 129 ~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~ 187 (295)
..+|+..+.+. ...|+++..+.||.+-.+...... . ..+.+.....+.+. ..
T Consensus 156 ~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 228 (285)
T d1jtva_ 156 CASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF-------RE 228 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh-------cc
Confidence 48999888765 357899999999998765321100 0 00111111111110 01
Q ss_pred eeeeHHHHHHHHHHHhcCCCCCCceEEecC
Q 022578 188 QLGHVKDLARAFVQVLGNEKASRQVFNISG 217 (295)
Q Consensus 188 ~~i~~~D~a~~i~~~~~~~~~~~~~~~i~~ 217 (295)
....++|+|++++.++..+.. ...++.+
T Consensus 229 ~~~~PeeVA~~v~~~~~~~~p--~~ry~~g 256 (285)
T d1jtva_ 229 AAQNPEEVAEVFLTALRAPKP--TLRYFTT 256 (285)
T ss_dssp HCBCHHHHHHHHHHHHHCSSC--CSEEESC
T ss_pred cCCCHHHHHHHHHHHHhCCCC--CeEEecH
Confidence 235689999999999987543 2334544
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.18 E-value=1.1e-11 Score=100.12 Aligned_cols=191 Identities=15% Similarity=0.092 Sum_probs=119.2
Q ss_pred CCcCCcchHHHHHHHHH---CCCeEEEEecCCCccccCCCCCCchhhhhc--cCCeEEEEecCCChHHHHHhhhc-----
Q 022578 1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA----- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~----- 70 (295)
|||++.||..++++|++ +|++|++.+|+.+...+.. .++.+. ..++..+.+|+++++++.++++.
T Consensus 12 TGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~ 86 (259)
T d1oaaa_ 12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP 86 (259)
T ss_dssp SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred eCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence 89999999999999986 6999999999877632211 112222 23678899999999988887642
Q ss_pred ----CCCcEEEEcccCC-----------------------hhc----HHHHHHhCC--C--CCcEEEeeccccccCCCCC
Q 022578 71 ----KGFDVVYDINGRE-----------------------ADE----VEPILDALP--N--LEQFIYCSSAGVYLKSDLL 115 (295)
Q Consensus 71 ----~~~d~vi~~a~~~-----------------------~~~----~~~ll~~~~--~--~~~~i~~Ss~~v~~~~~~~ 115 (295)
..+|+++|++|.. ..+ ++.++..++ + ..++|++||...+....
T Consensus 87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~-- 164 (259)
T d1oaaa_ 87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK-- 164 (259)
T ss_dssp CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT--
T ss_pred hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCc--
Confidence 2567899988751 112 333444454 2 35899999987642211
Q ss_pred CCCCCCCCCCCccchhhHHHHHHhh-----hcCCcEEEeccCeeecCCCCC----chHHHHHHHHHcCCCcccCCCCCce
Q 022578 116 PHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQV 186 (295)
Q Consensus 116 ~~~e~~~~~p~~~~~~k~~~E~~~~-----~~~~~~~i~R~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (295)
....|..+|...+.+.+ ..|+++..+.||.+..+.... .........+.... + .
T Consensus 165 --------~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~-------~ 227 (259)
T d1oaaa_ 165 --------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK--S-------D 227 (259)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH--H-------T
T ss_pred --------cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC--C-------C
Confidence 11234489998887763 468999999999887652100 00000111111000 0 0
Q ss_pred eeeeeHHHHHHHHHHHhcCCC-CCCceEEe
Q 022578 187 TQLGHVKDLARAFVQVLGNEK-ASRQVFNI 215 (295)
Q Consensus 187 ~~~i~~~D~a~~i~~~~~~~~-~~~~~~~i 215 (295)
..+..++|+|++++.++.+.. ..|+.+++
T Consensus 228 ~r~~~p~evA~~i~~ll~~~s~~TG~~idv 257 (259)
T d1oaaa_ 228 GALVDCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp TCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred CCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence 123568999999999886533 34555554
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.16 E-value=2.1e-10 Score=93.27 Aligned_cols=195 Identities=12% Similarity=0.048 Sum_probs=124.4
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCC
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF 73 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~ 73 (295)
|||+| -||.++++.|+++|++|++.+|+.+... . ..++.+......++.+|+++.+.+.+++.. -.+
T Consensus 11 TGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~-~-----~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~i 84 (274)
T d2pd4a1 11 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-R-----VRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL 84 (274)
T ss_dssp ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH-H-----HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred ECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-H-----HHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCC
Confidence 68877 6999999999999999999999854311 1 112333346678899999998887776643 389
Q ss_pred cEEEEcccCChh------------------------cHHHHHHhC-C---CCCcEEEeeccccccCCCCCCCCCCCCCCC
Q 022578 74 DVVYDINGREAD------------------------EVEPILDAL-P---NLEQFIYCSSAGVYLKSDLLPHCETDTVDP 125 (295)
Q Consensus 74 d~vi~~a~~~~~------------------------~~~~ll~~~-~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p 125 (295)
|++||+++.... ........+ . ....++.+|+.+..... ...
T Consensus 85 d~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~----------~~~ 154 (274)
T d2pd4a1 85 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM----------AHY 154 (274)
T ss_dssp EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------TTC
T ss_pred CeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc----------ccc
Confidence 999999986311 111122221 1 22345555555543211 112
Q ss_pred CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCch-HHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 126 ~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
..|..+|...+.+.+ ..|+++..+.||.+..+...... ............+. ..+..++|+|+
T Consensus 155 ~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedIA~ 225 (274)
T d2pd4a1 155 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVGN 225 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHH
T ss_pred hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------cCCcCHHHHHH
Confidence 224488988887763 47899999999998876432111 12222222222221 13356999999
Q ss_pred HHHHHhcCC--CCCCceEEecCCcc
Q 022578 198 AFVQVLGNE--KASRQVFNISGEKY 220 (295)
Q Consensus 198 ~i~~~~~~~--~~~~~~~~i~~~~~ 220 (295)
++..++.+. ...|+.+.+.+|..
T Consensus 226 ~v~fL~S~~s~~itG~~i~vDGG~~ 250 (274)
T d2pd4a1 226 AGMYLLSSLSSGVSGEVHFVDAGYH 250 (274)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHhChhhCCCcCceEEECCChh
Confidence 999998753 34788999999864
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.15 E-value=1.1e-09 Score=87.73 Aligned_cols=184 Identities=15% Similarity=0.112 Sum_probs=111.7
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-------C
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K 71 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~ 71 (295)
|||++-||.+++++|+++|+ +|++..|+.++..+.. .....++.++.+|+++.++++.+++. .
T Consensus 9 TGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~--------~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK--------SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH--------TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred eCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH--------HhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 89999999999999999985 7888888876632211 11235799999999999888776643 2
Q ss_pred CCcEEEEcccCC---------------------hhcHHHHHHhC----C-------------CCCcEEEeeccccccCCC
Q 022578 72 GFDVVYDINGRE---------------------ADEVEPILDAL----P-------------NLEQFIYCSSAGVYLKSD 113 (295)
Q Consensus 72 ~~d~vi~~a~~~---------------------~~~~~~ll~~~----~-------------~~~~~i~~Ss~~v~~~~~ 113 (295)
.+|++||+||.. ..++..+.+++ + ...+++.+|+...+-...
T Consensus 81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 160 (250)
T d1yo6a1 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence 489999999861 12233333332 1 224677777655432211
Q ss_pred CCCCCCCCCCCCC-ccchhhHHHHHHh-------hhcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCc
Q 022578 114 LLPHCETDTVDPK-SRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ 185 (295)
Q Consensus 114 ~~~~~e~~~~~p~-~~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (295)
.. . ....+. .|..+|+....+. +..|+++..+.||.+-.+-. ++
T Consensus 161 ~~---~-~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~--------------~~---------- 212 (250)
T d1yo6a1 161 TS---G-SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG--------------GK---------- 212 (250)
T ss_dssp CS---T-TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred cc---c-ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC--------------CC----------
Confidence 10 0 111122 2458999887664 35789999999998654310 00
Q ss_pred eeeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCcccC
Q 022578 186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT 222 (295)
Q Consensus 186 ~~~~i~~~D~a~~i~~~~~~~~--~~~~~~~i~~~~~~t 222 (295)
...+.+++.++.++..+.... ..|+.|+. ++.++.
T Consensus 213 -~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~-~g~p~~ 249 (250)
T d1yo6a1 213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMR-NLKPYE 249 (250)
T ss_dssp -------HHHHHHHHHHHTTCCGGGTTCEEET-TEEECC
T ss_pred -CCCCCHHHHHHHHHHHHhcCCCCCCeEEECC-CCeeCC
Confidence 112457888888888886532 34555543 445543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.14 E-value=5e-10 Score=90.50 Aligned_cols=196 Identities=15% Similarity=0.139 Sum_probs=119.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCCh----HHHHHhhhc-----
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDY----DFVKSSLSA----- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~----~~~~~~~~~----- 70 (295)
|||++-||.++++.|+++|++|++++|+.++..+.+ ..++ ......+..+..|..+. +.+.++++.
T Consensus 7 TGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 7 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRL----VAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHH----HHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999976632211 1111 22234566677666542 333333221
Q ss_pred CCCcEEEEcccCChhc-----------------------------------HHHHHHhCC-------CCCcEEEeecccc
Q 022578 71 KGFDVVYDINGREADE-----------------------------------VEPILDALP-------NLEQFIYCSSAGV 108 (295)
Q Consensus 71 ~~~d~vi~~a~~~~~~-----------------------------------~~~ll~~~~-------~~~~~i~~Ss~~v 108 (295)
..+|++||+||..... .......+. ....++.+|+...
T Consensus 83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (266)
T d1mxha_ 83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT 162 (266)
T ss_dssp SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence 2799999999862110 001111111 2234555555443
Q ss_pred ccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCC
Q 022578 109 YLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181 (295)
Q Consensus 109 ~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (295)
... ......|..+|...+.+.+ ..|+++..+.||.+..+.... ......+.+..++ +
T Consensus 163 ~~~----------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---~~~~~~~~~~~pl---~ 226 (266)
T d1mxha_ 163 DLP----------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---QETQEEYRRKVPL---G 226 (266)
T ss_dssp GSC----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---HHHHHHHHTTCTT---T
T ss_pred ccc----------CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---HHHHHHHHhcCCC---C
Confidence 211 1122234478998887753 578999999999987664322 2333444333222 2
Q ss_pred CCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 182 SGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 182 ~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
. -+..++|+|++++.++.+. ...|+.+.+.||-.+
T Consensus 227 r-----~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l 263 (266)
T d1mxha_ 227 Q-----SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 263 (266)
T ss_dssp S-----CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred C-----CCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence 1 2256999999999999763 347889999998654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.13 E-value=1.7e-10 Score=91.66 Aligned_cols=172 Identities=12% Similarity=0.059 Sum_probs=110.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHH-------hhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-------SLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~-------~~~~~~~ 73 (295)
|||+|.||..+++.|+++|++|.++++...... .....+..|..+.+..+. .+...++
T Consensus 8 TGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (236)
T d1dhra_ 8 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 72 (236)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence 799999999999999999999999988765521 123344455544433332 2232368
Q ss_pred cEEEEcccCC---------------------hhc----HHHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 74 DVVYDINGRE---------------------ADE----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 74 d~vi~~a~~~---------------------~~~----~~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|++||+||.. ..+ ++.++..+++..++|++||...+...+ ....|
T Consensus 73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~----------~~~~Y 142 (236)
T d1dhra_ 73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----------GMIGY 142 (236)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------TBHHH
T ss_pred eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc----------CCccc
Confidence 9999999851 111 222333344446899999987642211 11234
Q ss_pred chhhHHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|+..+.+.+ ..|+++..+.||.+..| +.+...... ..-.++.++++|+.+
T Consensus 143 ~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~pe~va~~~ 204 (236)
T d1dhra_ 143 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---------MNRKSMPEA---------DFSSWTPLEFLVETF 204 (236)
T ss_dssp HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---------HHHHHSTTS---------CGGGSEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC---------cchhhCccc---------hhhcCCCHHHHHHHH
Confidence 599999888763 24799999999998776 112221111 122457799999999
Q ss_pred HHHhcCCC--CCCceEEe
Q 022578 200 VQVLGNEK--ASRQVFNI 215 (295)
Q Consensus 200 ~~~~~~~~--~~~~~~~i 215 (295)
..++.... ..|+.+.+
T Consensus 205 ~~l~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 205 HDWITGNKRPNSGSLIQV 222 (236)
T ss_dssp HHHHTTTTCCCTTCEEEE
T ss_pred HHHhCCCccCCCCCeEEE
Confidence 99987543 35665555
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.12 E-value=5.1e-10 Score=91.35 Aligned_cols=197 Identities=11% Similarity=0.031 Sum_probs=118.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCe-----------------EEEEecCCChH
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKI-----------------LHLKGDRKDYD 62 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v-----------------~~~~~D~~~~~ 62 (295)
|||++-||.++++.|+++|++|++.+|+..+....+. .++.+. .... ....+|+++.+
T Consensus 8 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~ 83 (284)
T d1e7wa_ 8 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 83 (284)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred eCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH----HHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence 7999999999999999999999998887654211110 011111 1222 33455688888
Q ss_pred HHHHhhhc-----CCCcEEEEcccCChh----------------------------------cHHHHHHh----------
Q 022578 63 FVKSSLSA-----KGFDVVYDINGREAD----------------------------------EVEPILDA---------- 93 (295)
Q Consensus 63 ~~~~~~~~-----~~~d~vi~~a~~~~~----------------------------------~~~~ll~~---------- 93 (295)
++++++++ .++|++||+||.... +...+.++
T Consensus 84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 163 (284)
T d1e7wa_ 84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA 163 (284)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence 77776643 389999999986311 00111111
Q ss_pred CC--CCCcEEEeeccccccCCCCCCCCCCCCCCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchH
Q 022578 94 LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE 164 (295)
Q Consensus 94 ~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~ 164 (295)
.. +..++|++++....... .....|..+|...+.+.+ ..|+++..+.||.+-... ...
T Consensus 164 ~~~~~~~~ii~~~s~~~~~~~----------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~---~~~ 230 (284)
T d1e7wa_ 164 KHRGTNYSIINMVDAMTNQPL----------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD---DMP 230 (284)
T ss_dssp GGSCSCEEEEEECCTTTTSCC----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG---GSC
T ss_pred HhcCCCCcccccccccccCCc----------cceeeeccccccchhhhHHHHHHhCCccccccccccccccccc---cCC
Confidence 11 33467777765542111 112235589999887753 568999999999643221 122
Q ss_pred HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcccC
Q 022578 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT 222 (295)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~t 222 (295)
....+......+. .+ -+..++|+|++++.++.+. ...|+.+.+.||..++
T Consensus 231 ~~~~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 231 PAVWEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp HHHHHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 3334444333321 11 2356999999999998653 2478899999986554
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.12 E-value=3.9e-10 Score=90.23 Aligned_cols=142 Identities=18% Similarity=0.196 Sum_probs=97.8
Q ss_pred CCcCCcchHHHHHHHHH---CCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-------
Q 022578 1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------- 70 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------- 70 (295)
|||++-||.+++++|++ +|++|++..|+.++..+. .++.+...++.++.+|++|+++++++++.
T Consensus 8 TGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 8 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL------EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH------HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHH------HHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 89999999999999975 699999999998774221 12233346899999999999888776653
Q ss_pred CCCcEEEEcccCC---------------------hhcHHH----HHHhCC-------------CCCcEEEeeccccccCC
Q 022578 71 KGFDVVYDINGRE---------------------ADEVEP----ILDALP-------------NLEQFIYCSSAGVYLKS 112 (295)
Q Consensus 71 ~~~d~vi~~a~~~---------------------~~~~~~----ll~~~~-------------~~~~~i~~Ss~~v~~~~ 112 (295)
..+|++||+||.. ..++.. ++..++ +..++|++||..-.-.
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~- 160 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ- 160 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST-
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC-
Confidence 3699999999861 112222 222221 3568999998653211
Q ss_pred CCCCCCCCCCCCCC--ccchhhHHHHHHh-------hhcCCcEEEeccCeeecC
Q 022578 113 DLLPHCETDTVDPK--SRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGP 157 (295)
Q Consensus 113 ~~~~~~e~~~~~p~--~~~~~k~~~E~~~-------~~~~~~~~i~R~~~i~g~ 157 (295)
....|. .|..+|+....+. ...|+++..+.||.+-.+
T Consensus 161 --------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 161 --------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp --------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred --------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 011122 3448999877664 357899999999988665
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.09 E-value=2.1e-10 Score=91.11 Aligned_cols=172 Identities=13% Similarity=0.109 Sum_probs=107.7
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHH-------HHhhhcCCC
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-------KSSLSAKGF 73 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-------~~~~~~~~~ 73 (295)
|||+|.||.+++++|+++|++|++++|+..... .....+.+|..+.+.. ...++...+
T Consensus 8 TGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 72 (235)
T d1ooea_ 8 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV 72 (235)
T ss_dssp ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence 799999999999999999999999999876521 1223344555443322 223332468
Q ss_pred cEEEEcccCC---------------------hhcH----HHHHHhCCCCCcEEEeeccccccCCCCCCCCCCCCCCCCcc
Q 022578 74 DVVYDINGRE---------------------ADEV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR 128 (295)
Q Consensus 74 d~vi~~a~~~---------------------~~~~----~~ll~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~ 128 (295)
|++||+||.. ..++ +.++..+++..++|++||...+...+ ....|
T Consensus 73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~----------~~~~Y 142 (235)
T d1ooea_ 73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP----------SMIGY 142 (235)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------TBHHH
T ss_pred eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc----------cccch
Confidence 9999999852 1112 22333344446899999977542211 11224
Q ss_pred chhhHHHHHHhhh---------cCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 022578 129 HKGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199 (295)
Q Consensus 129 ~~~k~~~E~~~~~---------~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i 199 (295)
..+|...+.+.+. .++++..+.||.+-.+ +.+...... ....++.++|+++.+
T Consensus 143 ~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~---------~~~~~~~~~---------~~~~~~~~~~va~~~ 204 (235)
T d1ooea_ 143 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP---------MNRKWMPNA---------DHSSWTPLSFISEHL 204 (235)
T ss_dssp HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH---------HHHHHSTTC---------CGGGCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc---------chhhhCcCC---------ccccCCCHHHHHHHH
Confidence 4999998887632 3667888999886554 222221111 123457899999998
Q ss_pred HHHhcCCC---CCCceEEe
Q 022578 200 VQVLGNEK---ASRQVFNI 215 (295)
Q Consensus 200 ~~~~~~~~---~~~~~~~i 215 (295)
+..+..+. ..|..+.+
T Consensus 205 ~~~l~~~~~~~~tG~~i~v 223 (235)
T d1ooea_ 205 LKWTTETSSRPSSGALLKI 223 (235)
T ss_dssp HHHHHCGGGCCCTTCEEEE
T ss_pred HHHhcCccccCCCceEEEE
Confidence 87665432 35666666
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.03 E-value=5.5e-10 Score=90.38 Aligned_cols=196 Identities=16% Similarity=0.092 Sum_probs=117.6
Q ss_pred CCcCC--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc--------
Q 022578 1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------- 70 (295)
Q Consensus 1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------- 70 (295)
|||+| .||.++++.|+++|++|++..|+..+..+... .....+...+++|+++++++..+++.
T Consensus 12 tGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~-------~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~ 84 (268)
T d2h7ma1 12 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT-------DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 84 (268)
T ss_dssp CCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH-------TTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred ECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH-------HHcCCceeeEeeecccccccccccchhhhccccC
Confidence 68655 59999999999999999999988765321110 11235678899999998766555433
Q ss_pred CCCcEEEEcccCChh-------------------------cHHHHHHhCC---CCCcEEEeeccccccCCCCCCCCCCCC
Q 022578 71 KGFDVVYDINGREAD-------------------------EVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDT 122 (295)
Q Consensus 71 ~~~d~vi~~a~~~~~-------------------------~~~~ll~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~ 122 (295)
..+|+++|+++.... .......+.. +....|.++|...... .
T Consensus 85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~----------~ 154 (268)
T d2h7ma1 85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA----------M 154 (268)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC----------C
T ss_pred CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc----------C
Confidence 257999999986211 0111112211 2234444444433211 1
Q ss_pred CCCCccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCC-------CCc----hHHHHHHHHHcCCCcccCCCCC
Q 022578 123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN-------YNP----VEEWFFHRLKAGRPIPIPGSGI 184 (295)
Q Consensus 123 ~~p~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~ 184 (295)
+....|..+|...+.+.+ ..|+++..+.||.+-.+.. ... ....+........|+ +
T Consensus 155 p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl---~--- 228 (268)
T d2h7ma1 155 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---G--- 228 (268)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---C---
T ss_pred cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCC---C---
Confidence 122234488998888763 4689999999998865410 000 011112222222221 1
Q ss_pred ceeeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 022578 185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV 221 (295)
Q Consensus 185 ~~~~~i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~~~~ 221 (295)
+.+..++|+|+++..++.+. ...|+.+.+.+|...
T Consensus 229 --rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~ 265 (268)
T d2h7ma1 229 --WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265 (268)
T ss_dssp --CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred --CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence 12355899999999998652 246888999888643
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=8.8e-10 Score=89.20 Aligned_cols=174 Identities=14% Similarity=0.074 Sum_probs=113.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~ 75 (295)
|||++.||.++++.|+++|++|++++|+.+...+... .........+..+.+|..+.+......+. ..+|+
T Consensus 20 TGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~ 95 (269)
T d1xu9a_ 20 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM 95 (269)
T ss_dssp SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence 7999999999999999999999999999776322110 00112234678889999988776665543 27899
Q ss_pred EEEcccCC--------------------hhc----HHHHHHhCC-CCCcEEEeeccccccCCCCCCCCCCCCCCCCccch
Q 022578 76 VYDINGRE--------------------ADE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK 130 (295)
Q Consensus 76 vi~~a~~~--------------------~~~----~~~ll~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~~ 130 (295)
++++++.. ..+ ++.++..++ +..++|++||.+.+-.. +....|..
T Consensus 96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~----------p~~~~Y~a 165 (269)
T d1xu9a_ 96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY----------PMVAAYSA 165 (269)
T ss_dssp EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC----------TTCHHHHH
T ss_pred cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCC----------CCchHHHH
Confidence 99998762 112 333444444 55799999998753221 11223459
Q ss_pred hhHHHHHHhh---------hcCCcEEEeccCeeecCCCCCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 022578 131 GKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201 (295)
Q Consensus 131 ~k~~~E~~~~---------~~~~~~~i~R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~ 201 (295)
+|+..+.+.+ ..++++..+.||.+-.+ +......+. ........+++|+.++.
T Consensus 166 sKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~~e~~a~~i~~ 227 (269)
T d1xu9a_ 166 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---------TAMKAVSGI---------VHMQAAPKEECALEIIK 227 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---------HHHHHSCGG---------GGGGCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc---------HHHHhccCC---------ccccCCCHHHHHHHHHH
Confidence 9999887652 24688899999987554 222221111 11233567899988888
Q ss_pred HhcCC
Q 022578 202 VLGNE 206 (295)
Q Consensus 202 ~~~~~ 206 (295)
.+...
T Consensus 228 ~~~~~ 232 (269)
T d1xu9a_ 228 GGALR 232 (269)
T ss_dssp HHHTT
T ss_pred HhhcC
Confidence 76543
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=1.8e-10 Score=93.73 Aligned_cols=174 Identities=15% Similarity=0.083 Sum_probs=112.9
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d 74 (295)
|||++-||..++++|+++ |++|++..|+.++..+. ..++.+...++.++.+|++|.+++++++++ ..+|
T Consensus 9 TGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD 83 (275)
T d1wmaa1 9 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAA-----VQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD 83 (275)
T ss_dssp SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence 899999999999999986 89999999998774322 122333446799999999999888776654 2799
Q ss_pred EEEEcccCC--------------------hhcHHHHHHh----CCCCCcEEEeeccccccCC-CCCC----------C--
Q 022578 75 VVYDINGRE--------------------ADEVEPILDA----LPNLEQFIYCSSAGVYLKS-DLLP----------H-- 117 (295)
Q Consensus 75 ~vi~~a~~~--------------------~~~~~~ll~~----~~~~~~~i~~Ss~~v~~~~-~~~~----------~-- 117 (295)
++||+||.. ..++..+.++ ++...++|++||....... ...+ .
T Consensus 84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~ 163 (275)
T d1wmaa1 84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE 163 (275)
T ss_dssp EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccch
Confidence 999999972 2233333333 4444589999996543210 0000 0
Q ss_pred -----------------CCCCCCCCCc-cchhhHHHHHHhh-----------hcCCcEEEeccCeeecCCCCCchHHHHH
Q 022578 118 -----------------CETDTVDPKS-RHKGKLNTESVLE-----------SKGVNWTSLRPVYIYGPLNYNPVEEWFF 168 (295)
Q Consensus 118 -----------------~e~~~~~p~~-~~~~k~~~E~~~~-----------~~~~~~~i~R~~~i~g~~~~~~~~~~~~ 168 (295)
.......+.. |..+|+....+.+ ..++.+..+.||++-.+-.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~--------- 234 (275)
T d1wmaa1 164 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA--------- 234 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT---------
T ss_pred hhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc---------
Confidence 0001112223 4488887655431 2489999999998765521
Q ss_pred HHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 022578 169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204 (295)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~ 204 (295)
.. . ....++|.|+.++.++.
T Consensus 235 ------~~-------~---~~~~pee~A~~~~~~a~ 254 (275)
T d1wmaa1 235 ------GP-------K---ATKSPEEGAETPVYLAL 254 (275)
T ss_dssp ------CT-------T---CSBCHHHHTHHHHHHHS
T ss_pred ------cC-------c---ccCCHHHHHHHHHHHHc
Confidence 00 0 11358899998888764
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.80 E-value=4.9e-08 Score=81.05 Aligned_cols=201 Identities=7% Similarity=-0.042 Sum_probs=110.5
Q ss_pred CC--cCCcchHHHHHHHHHCCCeEEEEecCCCccc-------cCCCCCCchhhhhccCCeEEEEe---------------
Q 022578 1 MG--GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-------QQLPGESDQEFAEFSSKILHLKG--------------- 56 (295)
Q Consensus 1 tG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~--------------- 56 (295)
|| ++.-||..+++.|+++|.+|.+..+...... ..+.........+.........+
T Consensus 8 TGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (329)
T d1uh5a_ 8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETK 87 (329)
T ss_dssp ECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHHHH
T ss_pred eCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchhhh
Confidence 57 5568999999999999999999877643210 00000000000000011222222
Q ss_pred -----cCCChHHHHHhhhc-----CCCcEEEEcccCCh----------------------hcHHHHHHhC----CCCCcE
Q 022578 57 -----DRKDYDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDAL----PNLEQF 100 (295)
Q Consensus 57 -----D~~~~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~ll~~~----~~~~~~ 100 (295)
|+.+.+.++.+++. -++|++||++|... .+...+++++ +...++
T Consensus 88 ~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsI 167 (329)
T d1uh5a_ 88 NNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSI 167 (329)
T ss_dssp TSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccccccc
Confidence 44443333333221 28999999987521 1122233332 344589
Q ss_pred EEeeccccccCCCCCCCCCCCCCCCCccc-hhhHHHHHHhh--------hcCCcEEEeccCeeecCCC------------
Q 022578 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLN------------ 159 (295)
Q Consensus 101 i~~Ss~~v~~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~--------~~~~~~~i~R~~~i~g~~~------------ 159 (295)
|.+||.+.... .+....+| .+|+..+.+.+ ++|+++..|.||.+-.+..
T Consensus 168 v~iss~~~~~~----------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~ 237 (329)
T d1uh5a_ 168 ISLTYHASQKV----------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN 237 (329)
T ss_dssp EEEECGGGTSC----------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred ccceeehhccc----------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence 99998765321 11112344 89999887763 3589999999998754100
Q ss_pred --------------------------------CCchHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC--
Q 022578 160 --------------------------------YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-- 205 (295)
Q Consensus 160 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~i~~~~~~-- 205 (295)
.......+........|+ .-+..++|+|.+++.++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------~R~~~pedvA~~v~fLaSd~s 308 (329)
T d1uh5a_ 238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL---------RQKLLSTDIGSVASFLLSRES 308 (329)
T ss_dssp ----------------------------------CHHHHHHHHHHHHSSS---------CSCCCHHHHHHHHHHHHSGGG
T ss_pred hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCC---------CCCcCHHHHHHHHHHHhCchh
Confidence 001111111222222221 1235699999999999865
Q ss_pred CCCCCceEEecCCcc
Q 022578 206 EKASRQVFNISGEKY 220 (295)
Q Consensus 206 ~~~~~~~~~i~~~~~ 220 (295)
....|+.+.+.+|..
T Consensus 309 ~~iTGq~i~VDGG~~ 323 (329)
T d1uh5a_ 309 RAITGQTIYVDNGLN 323 (329)
T ss_dssp TTCCSCEEEESTTGG
T ss_pred CCccCCeEEECCCcc
Confidence 235788999988853
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.79 E-value=3.8e-08 Score=80.46 Aligned_cols=84 Identities=7% Similarity=0.008 Sum_probs=57.0
Q ss_pred ccchhhHHHHHHh--------hhcCCcEEEeccCeeecCCCCC-chHHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 022578 127 SRHKGKLNTESVL--------ESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197 (295)
Q Consensus 127 ~~~~~k~~~E~~~--------~~~~~~~~i~R~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 197 (295)
.|..+|...+.+. ...|+++..+.||.+..+.... .....+.+...+..|+ + .+..++|+|+
T Consensus 191 ~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl---g------R~~~peevA~ 261 (297)
T d1d7oa_ 191 GMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPI---Q------KTLTADEVGN 261 (297)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSS---C------CCBCHHHHHH
T ss_pred ceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCC---C------CCCCHHHHHH
Confidence 3558887776654 2468999999999998876432 2333444444443332 1 2356999999
Q ss_pred HHHHHhcC--CCCCCceEEecCCc
Q 022578 198 AFVQVLGN--EKASRQVFNISGEK 219 (295)
Q Consensus 198 ~i~~~~~~--~~~~~~~~~i~~~~ 219 (295)
+++.++.+ ....|+.+.+.+|-
T Consensus 262 ~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 262 AAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhCchhcCCcCceEEECcCH
Confidence 99999865 33478899998874
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.74 E-value=4.8e-08 Score=78.09 Aligned_cols=188 Identities=16% Similarity=0.147 Sum_probs=100.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhh----c--CCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A--KGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~----~--~~~d 74 (295)
|||++.||.+++++|+++|++|++++|+..+. ..|+.+.+....... + ..+|
T Consensus 7 TGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------------~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------IADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 79999999999999999999999999876552 234555443333221 1 2689
Q ss_pred EEEEcccCChh-------------cHHHHHH----hCC--CCCcEEEeeccccccC-CCCCCCC----------------
Q 022578 75 VVYDINGREAD-------------EVEPILD----ALP--NLEQFIYCSSAGVYLK-SDLLPHC---------------- 118 (295)
Q Consensus 75 ~vi~~a~~~~~-------------~~~~ll~----~~~--~~~~~i~~Ss~~v~~~-~~~~~~~---------------- 118 (295)
+++++|+.... +...+.+ ... .......+++...... ....+..
T Consensus 65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~ 144 (257)
T d1fjha_ 65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE 144 (257)
T ss_dssp EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehh
Confidence 99999986321 1122222 221 3334444443322110 0000000
Q ss_pred CCCCCCC-CccchhhHHHHHHhh-------hcCCcEEEeccCeeecCCCCCchH-HHHHHHHHcCCCcccCCCCCceeee
Q 022578 119 ETDTVDP-KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQL 189 (295)
Q Consensus 119 e~~~~~p-~~~~~~k~~~E~~~~-------~~~~~~~i~R~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (295)
......+ ..|..+|...+.+.+ ..|+++..+.||.+-.|....... ........+.. .+ ..-+
T Consensus 145 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~P-------lgR~ 216 (257)
T d1fjha_ 145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV-PP-------MGRR 216 (257)
T ss_dssp TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CC-CS-------TTSC
T ss_pred ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcC-CC-------CCCC
Confidence 0000001 124489999887763 468999999999987763211110 00111111110 01 1124
Q ss_pred eeHHHHHHHHHHHhcCC--CCCCceEEecCC
Q 022578 190 GHVKDLARAFVQVLGNE--KASRQVFNISGE 218 (295)
Q Consensus 190 i~~~D~a~~i~~~~~~~--~~~~~~~~i~~~ 218 (295)
..++|+|+++..++.+. ...|+.+.+.||
T Consensus 217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp CCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 56899999999998653 357889999887
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.56 E-value=7.1e-09 Score=79.25 Aligned_cols=75 Identities=19% Similarity=0.210 Sum_probs=60.8
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|||+|.||..+++.|+++|++|+++.|+.++..+.. ..+.. ..++.+..+|+.+.+++.+++. ++|+|||++
T Consensus 29 tGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~-~~~~~~~~~d~~~~~~~~~~~~--~iDilin~A 100 (191)
T d1luaa1 29 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA-----DSVNK-RFKVNVTAAETADDASRAEAVK--GAHFVFTAG 100 (191)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHH-HHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred ECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHH-----HHHHh-ccchhhhhhhcccHHHHHHHhc--CcCeeeecC
Confidence 799999999999999999999999999987742211 11111 1356778899999999999999 999999999
Q ss_pred cCC
Q 022578 81 GRE 83 (295)
Q Consensus 81 ~~~ 83 (295)
|..
T Consensus 101 g~g 103 (191)
T d1luaa1 101 AIG 103 (191)
T ss_dssp CTT
T ss_pred ccc
Confidence 863
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.93 E-value=8.1e-06 Score=57.89 Aligned_cols=86 Identities=13% Similarity=0.109 Sum_probs=63.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~ 81 (295)
|.|.+|+.+++.|.+.|++|++++.+++....... .+...+.+|.++++.+.++ +. ++|.||-+.+
T Consensus 7 G~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-----------~~~~~~~gd~~~~~~l~~a~i~--~a~~vi~~~~ 73 (134)
T d2hmva1 7 GLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----------YATHAVIANATEENELLSLGIR--NFEYVIVAIG 73 (134)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-----------TCSEEEECCTTCTTHHHHHTGG--GCSEEEECCC
T ss_pred CCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-----------hCCcceeeecccchhhhccCCc--cccEEEEEcC
Confidence 46999999999999999999999999887543322 4577889999999999887 66 8999888876
Q ss_pred CChhcHHHHHHhCC--CCCcEE
Q 022578 82 READEVEPILDALP--NLEQFI 101 (295)
Q Consensus 82 ~~~~~~~~ll~~~~--~~~~~i 101 (295)
.+......+...++ +..++|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~ii 95 (134)
T d2hmva1 74 ANIQASTLTTLLLKELDIPNIW 95 (134)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEE
T ss_pred chHHhHHHHHHHHHHcCCCcEE
Confidence 54333332222333 555555
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.62 E-value=2e-05 Score=55.64 Aligned_cols=68 Identities=19% Similarity=0.361 Sum_probs=54.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHh-hhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~a~ 81 (295)
|.|.+|+.+++.|.+.|++|++++++++..... .+ ..++.++.+|.++++.+.++ ++ +.|.++-+..
T Consensus 7 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---------~~-~~~~~vi~Gd~~~~~~l~~~~i~--~a~~vv~~t~ 74 (132)
T d1lssa_ 7 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKA---------SA-EIDALVINGDCTKIKTLEDAGIE--DADMYIAVTG 74 (132)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HH-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEECCS
T ss_pred CCCHHHHHHHHHHHHCCCCcceecCChhhhhhh---------hh-hhhhhhccCcccchhhhhhcChh--hhhhhcccCC
Confidence 459999999999999999999999998763211 11 13678999999999999888 45 8999998765
Q ss_pred C
Q 022578 82 R 82 (295)
Q Consensus 82 ~ 82 (295)
.
T Consensus 75 ~ 75 (132)
T d1lssa_ 75 K 75 (132)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.42 E-value=0.00014 Score=54.08 Aligned_cols=98 Identities=14% Similarity=0.253 Sum_probs=66.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEE-ecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-GDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+||+|-+|...++.....|.+|+++++++++... ..+. .-.+++. -|-...+.+.+.....++|+||++
T Consensus 36 ~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~---------~~~~-Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~ 105 (182)
T d1v3va2 36 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY---------LKQI-GFDAAFNYKTVNSLEEALKKASPDGYDCYFDN 105 (182)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHT-TCSEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred EeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH---------HHhh-hhhhhcccccccHHHHHHHHhhcCCCceeEEe
Confidence 5899999999999999999999999998766321 1111 1222222 233334555556565689999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeecccccc
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSSAGVYL 110 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v~~ 110 (295)
.|. +.....+++++...+++.+.....|+
T Consensus 106 vG~--~~~~~~~~~l~~~G~~v~~G~~~~~~ 134 (182)
T d1v3va2 106 VGG--EFLNTVLSQMKDFGKIAICGAISVYN 134 (182)
T ss_dssp SCH--HHHHHHGGGEEEEEEEEECCCGGGTT
T ss_pred cCc--hhhhhhhhhccCCCeEEeecceeecc
Confidence 873 45667777777445888777665543
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=0.00012 Score=52.30 Aligned_cols=90 Identities=19% Similarity=0.188 Sum_probs=49.8
Q ss_pred CCcCCcchHHHHHHHHHCC----CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
+||||++|+.+++.|+++. .+++++.++......... ..-.....+..+.+. ++ ++|++
T Consensus 7 vGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~-----------~~~~~~~~~~~~~~~----~~--~~Div 69 (146)
T d1t4ba1 7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSF-----------GGTTGTLQDAFDLEA----LK--ALDII 69 (146)
T ss_dssp ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGG-----------GTCCCBCEETTCHHH----HH--TCSEE
T ss_pred ECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccc-----------cCCceeeecccchhh----hh--cCcEE
Confidence 4999999999999988763 367777665544211100 111112223334333 45 99999
Q ss_pred EEcccCChhcHHHHHHhCC-CCCcEEEeeccccc
Q 022578 77 YDINGREADEVEPILDALP-NLEQFIYCSSAGVY 109 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~ 109 (295)
|.+++. +..+.+...+. ...+.+.++.++.|
T Consensus 70 F~a~~~--~~s~~~~~~~~~~g~~~~VID~Ss~f 101 (146)
T d1t4ba1 70 VTCQGG--DYTNEIYPKLRESGWQGYWIDAASSL 101 (146)
T ss_dssp EECSCH--HHHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred EEecCc--hHHHHhhHHHHhcCCCeecccCCccc
Confidence 999853 34455555543 33333334444443
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.37 E-value=0.00022 Score=48.30 Aligned_cols=64 Identities=13% Similarity=-0.006 Sum_probs=52.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
|+|.+|+-++....+.|++|++++.++....... .-+++.+|+.|.+.+.++....++|+|-.-
T Consensus 18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------------a~~~i~~~~~d~~~l~~~~~~~~~DviT~E 81 (111)
T d1kjqa2 18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPHYIVPE 81 (111)
T ss_dssp SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------------CCeEEECCCCCHHHHHHHHHhhCCceEEEE
Confidence 5799999999999999999999999888743332 246788999999999998875578999643
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.31 E-value=0.00034 Score=51.51 Aligned_cols=86 Identities=13% Similarity=0.122 Sum_probs=59.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|+|.+|+.+++.|.++||+|++++|+.++.... .+..........+..+.......+. ..|.++.+...
T Consensus 9 GaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l---------~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~~~ 77 (182)
T d1e5qa1 9 GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKL---------SAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLIPY 77 (182)
T ss_dssp CCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHH---------HTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECSCG
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEECChHHHHHH---------HhcccccccccccccchhhhHhhhh--ccceeEeeccc
Confidence 459999999999999999999999999874322 2223455566667777778888888 88888877543
Q ss_pred ChhcHHHHHHhCC-CCCcEE
Q 022578 83 EADEVEPILDALP-NLEQFI 101 (295)
Q Consensus 83 ~~~~~~~ll~~~~-~~~~~i 101 (295)
......+..+. ...+++
T Consensus 78 --~~~~~~~~~~~~~~~~~~ 95 (182)
T d1e5qa1 78 --TFHATVIKSAIRQKKHVV 95 (182)
T ss_dssp --GGHHHHHHHHHHHTCEEE
T ss_pred --hhhhHHHHHHHhhcccee
Confidence 23333444433 333444
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.15 E-value=0.0017 Score=46.34 Aligned_cols=96 Identities=10% Similarity=0.094 Sum_probs=56.1
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEE--ecCCChHHH-HHhhhcC-CCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK--GDRKDYDFV-KSSLSAK-GFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~D~~~~~~~-~~~~~~~-~~d~v 76 (295)
+||.|.+|+.+++.|.++||+|++.+|++....... ..+.+++. ........+ .+..... .-.+|
T Consensus 15 IGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~ii 83 (152)
T d2pv7a2 15 VGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-----------LANADVVIVSVPINLTLETIERLKPYLTENMLL 83 (152)
T ss_dssp ETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-----------HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEE
T ss_pred EcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-----------hhhccccccccchhhheeeeecccccccCCceE
Confidence 367999999999999999999999999876632211 12333333 222222222 2222211 33577
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEeeccccccC
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCSSAGVYLK 111 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v~~~ 111 (295)
++++.....-.+.+.+.... +| +++.-++|.
T Consensus 84 iD~~Svk~~~~~~~~~~~~~--~~--v~~hP~~Gp 114 (152)
T d2pv7a2 84 ADLTSVKREPLAKMLEVHTG--AV--LGLHPMFGA 114 (152)
T ss_dssp EECCSCCHHHHHHHHHHCSS--EE--EEEEECSCT
T ss_pred EEecccCHHHHHHHHHHccC--CE--EEecccCCC
Confidence 78887665555555554432 44 455555554
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.88 E-value=0.00052 Score=50.86 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=62.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi 77 (295)
+||+|.+|...++.+...|.+|+++++++++.. .+ .+ .+.+.+ .|..++ +.+.+.....++|+||
T Consensus 32 ~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~-~l--------~~--~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~ 99 (183)
T d1pqwa_ 32 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-ML--------SR--LGVEYV-GDSRSVDFADEILELTDGYGVDVVL 99 (183)
T ss_dssp TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HH--------HT--TCCSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred ECCCCCcccccchhhccccccceeeeccccccc-cc--------cc--cccccc-ccCCccCHHHHHHHHhCCCCEEEEE
Confidence 589999999999999888999999998876522 11 11 233332 244444 3344444445899999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
++.+. +.....+++++...++|.++...
T Consensus 100 d~~g~--~~~~~~~~~l~~~G~~v~~G~~~ 127 (183)
T d1pqwa_ 100 NSLAG--EAIQRGVQILAPGGRFIELGKKD 127 (183)
T ss_dssp ECCCT--HHHHHHHHTEEEEEEEEECSCGG
T ss_pred ecccc--hHHHHHHHHhcCCCEEEEEccCC
Confidence 99983 45666777777446888875443
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=96.82 E-value=0.00034 Score=51.40 Aligned_cols=88 Identities=16% Similarity=0.187 Sum_probs=56.5
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||+|-+|...++.+...|.+|+++++++++... .++ -+.+.+. |..+.. ...-...++|+||++.
T Consensus 34 ~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~---------~~~--lGa~~~i-~~~~~~--~~~~~~~g~D~v~d~~ 99 (171)
T d1iz0a2 34 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL---------PLA--LGAEEAA-TYAEVP--ERAKAWGGLDLVLEVR 99 (171)
T ss_dssp SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH---------HHH--TTCSEEE-EGGGHH--HHHHHTTSEEEEEECS
T ss_pred Eeccccchhhhhhhhccccccccccccccccccc---------ccc--cccceee-ehhhhh--hhhhcccccccccccc
Confidence 5899999999999999999999999988766321 111 2333322 443332 2223334899999998
Q ss_pred cCChhcHHHHHHhCCCCCcEEEeec
Q 022578 81 GREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|. .....+++++...+++.++.
T Consensus 100 G~---~~~~~~~~l~~~G~~v~~G~ 121 (171)
T d1iz0a2 100 GK---EVEESLGLLAHGGRLVYIGA 121 (171)
T ss_dssp CT---THHHHHTTEEEEEEEEEC--
T ss_pred ch---hHHHHHHHHhcCCcEEEEeC
Confidence 73 34556666664457887653
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.77 E-value=0.0017 Score=45.94 Aligned_cols=93 Identities=24% Similarity=0.226 Sum_probs=54.5
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+||+|.+|++++..|..+|. ++.+++..+.+... + .+. ..........-+ ......+.++ ++|+||.
T Consensus 6 iGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-~------Dl~-~~~~~~~~~~~~-~~~~~~~~~~--~aDivVi 74 (144)
T d1mlda1 6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-A------DLS-HIETRATVKGYL-GPEQLPDCLK--GCDVVVI 74 (144)
T ss_dssp ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-H------HHT-TSSSSCEEEEEE-SGGGHHHHHT--TCSEEEE
T ss_pred ECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-H------HHh-hhhhhcCCCeEE-cCCChHHHhC--CCCEEEE
Confidence 48899999999999998874 78888876533110 0 000 001111111112 3445556777 9999999
Q ss_pred cccC--------------ChhcHHHHHHhCC--CCC-cEEEee
Q 022578 79 INGR--------------EADEVEPILDALP--NLE-QFIYCS 104 (295)
Q Consensus 79 ~a~~--------------~~~~~~~ll~~~~--~~~-~~i~~S 104 (295)
++|. |....+.+++.+. +.. .++.+|
T Consensus 75 tag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9985 3334566666665 333 444444
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.71 E-value=0.0016 Score=47.92 Aligned_cols=30 Identities=23% Similarity=0.307 Sum_probs=27.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|+++||+|++.+|++++.
T Consensus 9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~ 38 (176)
T d2pgda2 9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKV 38 (176)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSTHHH
T ss_pred eEhHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 579999999999999999999999998774
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.70 E-value=0.00054 Score=50.49 Aligned_cols=93 Identities=16% Similarity=0.093 Sum_probs=60.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeE-EEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+||+|-+|+..++-+...|.+|++.++++++.... .+ .+.+ .+.-+- +.+.........++|+||++
T Consensus 38 ~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~---------~~--lGa~~vi~~~~-~~~~~~~~~~~~gvD~vid~ 105 (176)
T d1xa0a2 38 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL---------RV--LGAKEVLARED-VMAERIRPLDKQRWAAAVDP 105 (176)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH---------HH--TTCSEEEECC----------CCSCCEEEEEEC
T ss_pred EeccchHHHHHHHHHHHcCCceEEecCchHHHHHH---------Hh--cccceeeecch-hHHHHHHHhhccCcCEEEEc
Confidence 58999999999999999999999999988873211 11 2222 232221 12233334455699999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
.|.. .....++.++...|++.++...
T Consensus 106 vgg~--~~~~~l~~l~~~Griv~~G~~~ 131 (176)
T d1xa0a2 106 VGGR--TLATVLSRMRYGGAVAVSGLTG 131 (176)
T ss_dssp STTT--THHHHHHTEEEEEEEEECSCCS
T ss_pred CCch--hHHHHHHHhCCCceEEEeeccc
Confidence 8743 5677777777555888777653
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.68 E-value=0.00078 Score=49.48 Aligned_cols=90 Identities=11% Similarity=0.143 Sum_probs=60.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH---HHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~vi 77 (295)
+||+|.+|...++.+...|.+|+++++++++... .++ -+.+.+ .|.++.+ .+.+.....++|+||
T Consensus 35 ~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~---------~~~--~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~ 102 (174)
T d1yb5a2 35 HGASGGVGLAACQIARAYGLKILGTAGTEEGQKI---------VLQ--NGAHEV-FNHREVNYIDKIKKYVGEKGIDIII 102 (174)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHH--TTCSEE-EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred EeccccccccccccccccCccccccccccccccc---------ccc--cCcccc-cccccccHHHHhhhhhccCCceEEe
Confidence 4889999999999999999999999987655211 111 233222 2555543 334444445799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEee
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
++.+. ......++.++...++|.++
T Consensus 103 d~~g~--~~~~~~~~~l~~~G~iv~~G 127 (174)
T d1yb5a2 103 EMLAN--VNLSKDLSLLSHGGRVIVVG 127 (174)
T ss_dssp ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred ecccH--HHHHHHHhccCCCCEEEEEe
Confidence 99873 45667778887445888765
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.66 E-value=0.0018 Score=46.81 Aligned_cols=99 Identities=10% Similarity=0.053 Sum_probs=60.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCC--CCchhhhhccCCeEEEEecCCChHHHHHhhhc--------CC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------KG 72 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--------~~ 72 (295)
|.|.+|+.+++.|+++||+|++.+|++++....... .......+.....+++..-+.+.+.++.++.. ..
T Consensus 8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~~~l~~ 87 (162)
T d3cuma2 8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP 87 (162)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHHHHSCT
T ss_pred EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccccccCCC
Confidence 589999999999999999999999987663211100 00001112223445555555666665555431 12
Q ss_pred CcEEEEcccCChhcHHHHHHhCC-CCCcEE
Q 022578 73 FDVVYDINGREADEVEPILDALP-NLEQFI 101 (295)
Q Consensus 73 ~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i 101 (295)
=++|+++....++.++.+.+.++ ..-+|+
T Consensus 88 g~iiid~st~~p~~~~~~~~~~~~~gi~~~ 117 (162)
T d3cuma2 88 GTLVLECSTIAPTSARKIHAAARERGLAML 117 (162)
T ss_dssp TCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHCCCcEE
Confidence 35777777777777777777766 333555
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.64 E-value=0.0013 Score=47.10 Aligned_cols=72 Identities=15% Similarity=0.204 Sum_probs=54.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-+|..+++.|.++|++|+++..+++....... .....++.++.||.++++.+.++-- .+++.||-+...
T Consensus 10 G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~-------~~~~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi~~~~~ 81 (153)
T d1id1a_ 10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALSDN 81 (153)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECSSC
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHH-------HhhcCCcEEEEccCcchHHHHHhcc-ccCCEEEEcccc
Confidence 56899999999999999999999988764211110 1112579999999999998876543 378999988754
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.46 E-value=0.0035 Score=44.32 Aligned_cols=88 Identities=22% Similarity=0.296 Sum_probs=48.5
Q ss_pred CCcCCcchHHHHHHHHHCC----CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v 76 (295)
+||||++|..+++.|+++. .++..++.+..... ... +.... ....+..+.+ .++ ++|+|
T Consensus 6 iGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk-~~~---------~~~~~-~~~~~~~~~~----~~~--~~Dvv 68 (147)
T d1mb4a1 6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP-APN---------FGKDA-GMLHDAFDIE----SLK--QLDAV 68 (147)
T ss_dssp ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB-CCC---------SSSCC-CBCEETTCHH----HHT--TCSEE
T ss_pred ECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc-ccc---------cCCcc-eeeecccchh----hhc--cccEE
Confidence 4999999999999998753 35665554433211 110 01111 1111223333 345 89999
Q ss_pred EEcccCChhcHHHHHHhCC--CCC-cEEEeeccc
Q 022578 77 YDINGREADEVEPILDALP--NLE-QFIYCSSAG 107 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~--~~~-~~i~~Ss~~ 107 (295)
|.+.+.. -...+...+. +.+ .+|=.|+..
T Consensus 69 F~alp~~--~s~~~~~~l~~~g~~~~VIDlSsdf 100 (147)
T d1mb4a1 69 ITCQGGS--YTEKVYPALRQAGWKGYWIDAASTL 100 (147)
T ss_dssp EECSCHH--HHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred EEecCch--HHHHHhHHHHHcCCceEEEeCCccc
Confidence 9997532 3444554433 433 466666654
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.45 E-value=0.0012 Score=47.71 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=27.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|+++||+|++.+|++++.
T Consensus 7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~ 36 (161)
T d1vpda2 7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAI 36 (161)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred ehhHHHHHHHHHHHHCCCeEEEEeCCcchh
Confidence 579999999999999999999999998763
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.45 E-value=0.00075 Score=47.90 Aligned_cols=87 Identities=17% Similarity=0.116 Sum_probs=48.8
Q ss_pred CCcCCcchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
.||||++|..+++.|.+++| ++..+..+.+.. +... ...-+....++ +. ..+. ++|++|
T Consensus 8 vGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G-k~i~----------~~~~~~~~~~~---~~--~~~~--~~d~vf 69 (144)
T d2hjsa1 8 VGATGSVGEALVGLLDERDFPLHRLHLLASAESAG-QRMG----------FAESSLRVGDV---DS--FDFS--SVGLAF 69 (144)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT-CEEE----------ETTEEEECEEG---GG--CCGG--GCSEEE
T ss_pred ECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC-ccee----------eccccchhccc---hh--hhhc--cceEEE
Confidence 49999999999999987654 677665444331 1110 01111221222 11 2344 899999
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEEEeeccc
Q 022578 78 DINGREADEVEPILDALP-NLEQFIYCSSAG 107 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~ 107 (295)
.+++. .....+...+. ...++|-.|+..
T Consensus 70 ~a~p~--~~s~~~~~~~~~~g~~VID~Ss~f 98 (144)
T d2hjsa1 70 FAAAA--EVSRAHAERARAAGCSVIDLSGAL 98 (144)
T ss_dssp ECSCH--HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ecCCc--chhhhhccccccCCceEEeechhh
Confidence 88753 33444444443 555777777654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.44 E-value=0.00069 Score=50.06 Aligned_cols=86 Identities=12% Similarity=0.014 Sum_probs=51.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|+|.+|..++..|.++||+|++++|+++......... ......+..+..........++.+.++ ++|+||.+..
T Consensus 8 GaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~~~--~aD~iii~v~- 81 (184)
T d1bg6a2 8 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG---AIIAEGPGLAGTAHPDLLTSDIGLAVK--DADVILIVVP- 81 (184)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT---SEEEESSSCCEEECCSEEESCHHHHHT--TCSEEEECSC-
T ss_pred CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC---CCchhhhhhhhhhhhhhhhhhhHhHhc--CCCEEEEEEc-
Confidence 4699999999999999999999999876532110000 000001112222211111233567788 9999999864
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
....+.+++.++
T Consensus 82 -~~~~~~~~~~i~ 93 (184)
T d1bg6a2 82 -AIHHASIAANIA 93 (184)
T ss_dssp -GGGHHHHHHHHG
T ss_pred -hhHHHHHHHHhh
Confidence 446677776655
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.39 E-value=0.0005 Score=51.36 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=29.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
+||+|.+|+.|++.|++.||+|.+.+|++++.
T Consensus 6 igGaG~iG~alA~~la~~G~~V~l~~R~~e~~ 37 (212)
T d1jaya_ 6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKA 37 (212)
T ss_dssp ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred EeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 48889999999999999999999999998763
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.17 E-value=0.009 Score=42.89 Aligned_cols=77 Identities=21% Similarity=0.177 Sum_probs=46.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.++..|.+.|++|++++|++......... ..............+. ..+. .+|+||.+.-.
T Consensus 7 GaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~----~~~~--~~D~iii~vka 73 (167)
T d1ks9a2 7 GCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLV-------ETDGSIFNESLTANDP----DFLA--TSDLLLVTLKA 73 (167)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEE-------CTTSCEEEEEEEESCH----HHHH--TCSEEEECSCG
T ss_pred CcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccc-------cCCccccccccccchh----hhhc--ccceEEEeecc
Confidence 359999999999999999999999998764321110 0001111111111233 3345 89999998653
Q ss_pred ChhcHHHHHHhC
Q 022578 83 EADEVEPILDAL 94 (295)
Q Consensus 83 ~~~~~~~ll~~~ 94 (295)
..+..+++.+
T Consensus 74 --~~~~~~~~~l 83 (167)
T d1ks9a2 74 --WQVSDAVKSL 83 (167)
T ss_dssp --GGHHHHHHHH
T ss_pred --cchHHHHHhh
Confidence 3455555554
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.11 E-value=0.021 Score=41.13 Aligned_cols=91 Identities=12% Similarity=0.094 Sum_probs=59.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecC--CChHHHHHhhhc---CCCcEEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR--KDYDFVKSSLSA---KGFDVVY 77 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~~~~~~~~---~~~d~vi 77 (295)
|+|.+|...++.+...|.+|+++++++.+.... ++..... .+..|- .+.+.+.+.+.. .++|+||
T Consensus 34 G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a---------~~~ga~~-~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi 103 (170)
T d1e3ja2 34 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA---------KNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTI 103 (170)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred cccccchhhHhhHhhhcccccccchHHHHHHHH---------HHcCCcE-EEeccccccccchhhhhhhcccccCCceee
Confidence 478999999998888899999999988773211 1111222 222332 233444444432 4799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEee
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
+++|. .......++.++...+++.++
T Consensus 104 d~~g~-~~~~~~a~~~~~~~G~iv~~G 129 (170)
T d1e3ja2 104 DCSGN-EKCITIGINITRTGGTLMLVG 129 (170)
T ss_dssp ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred ecCCC-hHHHHHHHHHHhcCCceEEEe
Confidence 99874 445667788888556888766
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.06 E-value=0.0025 Score=46.18 Aligned_cols=71 Identities=21% Similarity=0.291 Sum_probs=46.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCC-eEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|.|.+|+.+++.|.++|++|++.+|+++...... + .+ +..... +. +.++ ++|+||-+..
T Consensus 7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~---------~--~~~~~~~~~---~~----~~~~--~~DiIilavp 66 (165)
T d2f1ka2 7 GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV---------E--RQLVDEAGQ---DL----SLLQ--TAKIIFLCTP 66 (165)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH---------H--TTSCSEEES---CG----GGGT--TCSEEEECSC
T ss_pred eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHH---------H--hhccceeee---ec----cccc--ccccccccCc
Confidence 5799999999999999999999999876532111 0 12 211211 11 3556 8999997653
Q ss_pred CChhcHHHHHHhCC
Q 022578 82 READEVEPILDALP 95 (295)
Q Consensus 82 ~~~~~~~~ll~~~~ 95 (295)
......+++.+.
T Consensus 67 --~~~~~~vl~~l~ 78 (165)
T d2f1ka2 67 --IQLILPTLEKLI 78 (165)
T ss_dssp --HHHHHHHHHHHG
T ss_pred --Hhhhhhhhhhhh
Confidence 445556665544
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.05 E-value=0.0098 Score=43.63 Aligned_cols=80 Identities=18% Similarity=0.086 Sum_probs=57.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|-||+.+++.|..-|.+|++.+|.+..... . -.++++++++ .+|+|+.+...
T Consensus 49 G~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~-----------------~-------~~~~l~ell~--~sDiv~~~~pl 102 (181)
T d1qp8a1 49 GLGEIGTRVGKILAALGAQVRGFSRTPKEGPW-----------------R-------FTNSLEEALR--EARAAVCALPL 102 (181)
T ss_dssp SCSTHHHHHHHHHHHTTCEEEEECSSCCCSSS-----------------C-------CBSCSHHHHT--TCSEEEECCCC
T ss_pred ccccccccceeeeeccccccccccccccccce-----------------e-------eeechhhhhh--ccchhhccccc
Confidence 57999999999999999999999988665211 0 1124678888 99999987766
Q ss_pred Chhc----HHHHHHhCCCCCcEEEeecccc
Q 022578 83 EADE----VEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~~----~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+. ....++.++....||.+|-..+
T Consensus 103 ~~~t~~li~~~~l~~mk~~ailIN~~RG~i 132 (181)
T d1qp8a1 103 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV 132 (181)
T ss_dssp STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred ccccccccccceeeeccccceEEecccccc
Confidence 4331 3456666776668888886554
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.95 E-value=0.01 Score=45.16 Aligned_cols=64 Identities=11% Similarity=0.065 Sum_probs=45.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhhcCCCcEEEEcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~~a 80 (295)
+||..|.+|++++..+|++|++++-...... ..++..+...-.+ .+.+.+.+. ++|++|++|
T Consensus 30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~~~~~t~~~m~~~~~~~~~--~~D~~i~aA 93 (223)
T d1u7za_ 30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------PPFVKRVDVMTALEMEAAVNASVQ--QQNIFIGCA 93 (223)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------CTTEEEEECCSHHHHHHHHHHHGG--GCSEEEECC
T ss_pred CcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------ccccccceehhhHHHHHHHHhhhc--cceeEeeee
Confidence 6899999999999999999999886655311 1356666553221 133344455 899999999
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
+.
T Consensus 94 Av 95 (223)
T d1u7za_ 94 AV 95 (223)
T ss_dssp BC
T ss_pred ch
Confidence 87
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=95.92 E-value=0.0043 Score=45.41 Aligned_cols=92 Identities=17% Similarity=0.160 Sum_probs=61.2
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChH---HHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~vi 77 (295)
+||+|.+|..+++.+...|.+|+++++++++.... ++. +.+.+ .|..+++ .+.++-...++|+|+
T Consensus 35 ~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~---------~~l--Ga~~v-i~~~~~d~~~~v~~~t~g~g~d~v~ 102 (179)
T d1qora2 35 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA---------LKA--GAWQV-INYREEDLVERLKEITGGKKVRVVY 102 (179)
T ss_dssp SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH---------HHH--TCSEE-EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred EccccccchHHHHHHHHhCCeEeecccchHHHHHH---------Hhc--CCeEE-EECCCCCHHHHHHHHhCCCCeEEEE
Confidence 58999999999999999999999999998873211 221 23322 2555543 344443445789999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
++.+. +.....++.++...+++.++..
T Consensus 103 d~~g~--~~~~~~~~~l~~~G~~v~~g~~ 129 (179)
T d1qora2 103 DSVGR--DTWERSLDCLQRRGLMVSFGNS 129 (179)
T ss_dssp ECSCG--GGHHHHHHTEEEEEEEEECCCT
T ss_pred eCccH--HHHHHHHHHHhcCCeeeecccc
Confidence 99874 3556667777633467665543
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=95.58 E-value=0.0016 Score=46.58 Aligned_cols=84 Identities=12% Similarity=0.039 Sum_probs=51.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+.+++.|+++|++|++.+|.++...... . .++.+.. +..++++ ++|+||-+...
T Consensus 7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~---------~--~~~~~~~-------~~~e~~~--~~diIi~~v~~ 66 (152)
T d1i36a2 7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER---------A--RTVGVTE-------TSEEDVY--SCPVVISAVTP 66 (152)
T ss_dssp SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH---------H--HHHTCEE-------CCHHHHH--TSSEEEECSCG
T ss_pred cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh---------h--hcccccc-------cHHHHHh--hcCeEEEEecC
Confidence 5799999999999999999999888776632111 0 1222211 2345677 89999998754
Q ss_pred ChhcHHHHHHhCC-CCCcEEEeeccc
Q 022578 83 EADEVEPILDALP-NLEQFIYCSSAG 107 (295)
Q Consensus 83 ~~~~~~~ll~~~~-~~~~~i~~Ss~~ 107 (295)
. .....+.+... ..+.+|-+||..
T Consensus 67 ~-~~~~~~~~~~~~~~~~~id~st~~ 91 (152)
T d1i36a2 67 G-VALGAARRAGRHVRGIYVDINNIS 91 (152)
T ss_dssp G-GHHHHHHHHHTTCCSEEEECSCCC
T ss_pred c-hHHHHHHhhcccCCceeeccCcCC
Confidence 3 22333333333 334566566543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.57 E-value=0.056 Score=38.84 Aligned_cols=90 Identities=13% Similarity=0.115 Sum_probs=60.4
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCe-EEEEecCCChHHHHHhhhc---CCCcEEE
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSA---KGFDVVY 77 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~---~~~d~vi 77 (295)
|.|.+|...++.+...|. +|+++++++.+... ... -+. .++..+-.+.....+.+.. .++|+||
T Consensus 34 G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~----------a~~-~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi 102 (171)
T d1pl8a2 34 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK----------AKE-IGADLVLQISKESPQEIARKVEGQLGCKPEVTI 102 (171)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----------HHH-TTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCccHHHHHHHHHHcCCceEEeccCCHHHHHH----------HHH-hCCcccccccccccccccccccccCCCCceEEE
Confidence 459999999999988898 79999988777321 111 133 3344444455544444432 4799999
Q ss_pred EcccCChhcHHHHHHhCCCCCcEEEee
Q 022578 78 DINGREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
.+.|. .......++.++...++++++
T Consensus 103 d~~G~-~~~~~~a~~~~~~gG~iv~~G 128 (171)
T d1pl8a2 103 ECTGA-EASIQAGIYATRSGGTLVLVG 128 (171)
T ss_dssp ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred eccCC-chhHHHHHHHhcCCCEEEEEe
Confidence 99985 445666778888556888776
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.50 E-value=0.012 Score=43.32 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=54.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEE-EecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+||+|-+|...++.+...|.++++ .++++++... +.....-..++...-.+..+..+.....++|+||++
T Consensus 37 ~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~---------l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~ 107 (187)
T d1vj1a2 37 SGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLF---------LTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDN 107 (187)
T ss_dssp SSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHH---------HHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEES
T ss_pred ECCCchhhHHHHHHHHHcCCcceecccchHHHHhh---------hhhcccceEEeeccchhHHHHHHHHhccCceEEEec
Confidence 589999999999999888976544 4555444111 111112233333322233332333334589999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeeccccc
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSSAGVY 109 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v~ 109 (295)
.|. +.....++.++...+++.+...+-|
T Consensus 108 vGg--~~~~~~~~~l~~~G~iv~~G~~s~~ 135 (187)
T d1vj1a2 108 VGG--DISNTVISQMNENSHIILCGQISQY 135 (187)
T ss_dssp SCH--HHHHHHHTTEEEEEEEEEC------
T ss_pred CCc--hhHHHHhhhccccccEEEecccccc
Confidence 873 3456666666655588877665543
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.09 E-value=0.0024 Score=46.89 Aligned_cols=92 Identities=17% Similarity=0.174 Sum_probs=61.3
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
+||+|-+|+..++.+...|.+|++++|++++.... .+ .+.+.+. |..+.+ ..+.+.+...|.||++.
T Consensus 38 ~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~---------~~--lGad~vi-~~~~~~-~~~~l~~~~~~~vvD~V 104 (177)
T d1o89a2 38 TGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL---------KS--LGASRVL-PRDEFA-ESRPLEKQVWAGAIDTV 104 (177)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH---------HH--HTEEEEE-EGGGSS-SCCSSCCCCEEEEEESS
T ss_pred EEccccchHHHHHHHHHcCCCeEEEecchhHHHHH---------Hh--hcccccc-ccccHH-HHHHHHhhcCCeeEEEc
Confidence 58999999999999999999999999998873211 11 2333332 332222 23445555789999998
Q ss_pred cCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 81 GREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
+.. .....++.++...++|.++...
T Consensus 105 gg~--~~~~~l~~l~~~Griv~~G~~~ 129 (177)
T d1o89a2 105 GDK--VLAKVLAQMNYGGCVAACGLAG 129 (177)
T ss_dssp CHH--HHHHHHHTEEEEEEEEECCCTT
T ss_pred chH--HHHHHHHHhccccceEeecccC
Confidence 643 4566667676445888776543
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.06 E-value=0.00088 Score=50.09 Aligned_cols=95 Identities=18% Similarity=0.252 Sum_probs=58.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-------------------hhccCCeEEEEecCCChHH
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-------------------AEFSSKILHLKGDRKDYDF 63 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------------------~~~~~~v~~~~~D~~~~~~ 63 (295)
|+|.+|+.++..++..|++|++.+++++........ ....+ .....++.+ ..+
T Consensus 11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~-i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~-------~~d 82 (192)
T d1f0ya2 11 GGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG-IEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-------STD 82 (192)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-HHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-------ESC
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh-HHHHHHHHHHhhhhccchhhHHHHHHHHhhccc-------cch
Confidence 469999999999999999999999998653211100 00000 000011111 123
Q ss_pred HHHhhhcCCCcEEEEcccCChhcHHHHHHhCC--CCCcEEEeeccc
Q 022578 64 VKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAG 107 (295)
Q Consensus 64 ~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~--~~~~~i~~Ss~~ 107 (295)
+.+++. ++|.|+-+...+.+.=+.++..+. -...-|+.|+++
T Consensus 83 ~~~a~~--~ad~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasnTS 126 (192)
T d1f0ya2 83 AASVVH--STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTS 126 (192)
T ss_dssp HHHHTT--SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCS
T ss_pred hHhhhc--ccceehhhcccchhHHHHHHHHHhhhcccCceeeccCc
Confidence 456677 999999999888777667776655 233455555544
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=95.04 E-value=0.0073 Score=44.67 Aligned_cols=97 Identities=13% Similarity=0.205 Sum_probs=59.4
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEec---CCCh-HHHHHhhh--cCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD---RKDY-DFVKSSLS--AKGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D---~~~~-~~~~~~~~--~~~~d 74 (295)
.||+|.+|...++.....|.+|++++|.+++..... ..+++. .--.++..| ..+. +.+.+... ..++|
T Consensus 36 ~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~-----~~~~~l-Gad~vi~~~~~~~~~~~~~v~~~~~~~g~~vd 109 (189)
T d1gu7a2 36 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLKEL-GATQVITEDQNNSREFGPTIKEWIKQSGGEAK 109 (189)
T ss_dssp SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHHHH-TCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred eCCCchHHHHHHHHHhhcCCeEEEEEecccccchHH-----hhhhhc-cccEEEeccccchhHHHHHHHHHHhhccCCce
Confidence 488999999999998888999999998876632111 001111 122233322 1111 22333221 13699
Q ss_pred EEEEcccCChhcHHHHHHhCCCCCcEEEeec
Q 022578 75 VVYDINGREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 75 ~vi~~a~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+||++.| .......++.++...++|.+..
T Consensus 110 vv~D~vg--~~~~~~~~~~l~~~G~~v~~G~ 138 (189)
T d1gu7a2 110 LALNCVG--GKSSTGIARKLNNNGLMLTYGG 138 (189)
T ss_dssp EEEESSC--HHHHHHHHHTSCTTCEEEECCC
T ss_pred EEEECCC--cchhhhhhhhhcCCcEEEEECC
Confidence 9999987 3456777888886668886653
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.94 E-value=0.0048 Score=43.56 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=43.7
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhh----hccCCeEEEEecCCChHHHHHhhhcCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFA----EFSSKILHLKGDRKDYDFVKSSLSAKGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~d 74 (295)
+||+|.+|..++..|+.++ .++.++++++...... .. ...+. ....++++...--.+. +.++ ++|
T Consensus 6 iGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~-g~--a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~--~aD 76 (145)
T d1hyea1 6 IGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLE-GL--REDIYDALAGTRSDANIYVESDENL----RIID--ESD 76 (145)
T ss_dssp ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHH-HH--HHHHHHHHTTSCCCCEEEEEETTCG----GGGT--TCS
T ss_pred ECCCChHHHHHHHHHHhCCcccccccccchhhhHhhh-cc--cccchhcccccccCCccccCCcchH----HHhc--cce
Confidence 4889999999999999988 4899888875321000 00 00000 0112344433221233 3555 999
Q ss_pred EEEEcccC
Q 022578 75 VVYDINGR 82 (295)
Q Consensus 75 ~vi~~a~~ 82 (295)
+||-+||.
T Consensus 77 vVVitAG~ 84 (145)
T d1hyea1 77 VVIITSGV 84 (145)
T ss_dssp EEEECCSC
T ss_pred EEEEeccc
Confidence 99999986
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=94.91 E-value=0.003 Score=45.86 Aligned_cols=92 Identities=17% Similarity=0.168 Sum_probs=56.9
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh-HHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~ 79 (295)
+||+|-+|...++.....|.+|+++++++++.... .+. +.+.+. |..+. ..........++|+||++
T Consensus 30 ~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~---------~~l--Gad~vi-~~~~~~~~~~~~~~~~gvd~vid~ 97 (167)
T d1tt7a2 30 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL---------KQL--GASEVI-SREDVYDGTLKALSKQQWQGAVDP 97 (167)
T ss_dssp ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH---------HHH--TCSEEE-EHHHHCSSCCCSSCCCCEEEEEES
T ss_pred eCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH---------Hhh--cccceE-eccchhchhhhcccCCCceEEEec
Confidence 48999999999998888899999999998773211 111 233322 21110 011112222489999999
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeecc
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSSA 106 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~ 106 (295)
.+. ......++.++...++|.+...
T Consensus 98 vgg--~~~~~~~~~l~~~G~iv~~G~~ 122 (167)
T d1tt7a2 98 VGG--KQLASLLSKIQYGGSVAVSGLT 122 (167)
T ss_dssp CCT--HHHHHHHTTEEEEEEEEECCCS
T ss_pred CcH--HHHHHHHHHhccCceEEEeecc
Confidence 763 3455666666644577766543
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=94.85 E-value=0.0051 Score=43.22 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=42.4
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhh---hccCCeEEEEecCCChHHHHHhhhcCCCcE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFA---EFSSKILHLKGDRKDYDFVKSSLSAKGFDV 75 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~ 75 (295)
+||+|.+|+.++..|+.++. ++.+++......... .. ...+. .......+..+|. + .++ +.|+
T Consensus 6 iGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~-g~--a~Dl~~~~~~~~~~~i~~~~~---~----~~~--~aDi 73 (142)
T d1o6za1 6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTV-GQ--AADTNHGIAYDSNTRVRQGGY---E----DTA--GSDV 73 (142)
T ss_dssp ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHH-HH--HHHHHHHHTTTCCCEEEECCG---G----GGT--TCSE
T ss_pred ECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccc-ee--ecchhhcccccCCceEeeCCH---H----Hhh--hcCE
Confidence 48899999999999999874 788777543221100 00 00111 1223455544443 2 345 9999
Q ss_pred EEEcccC
Q 022578 76 VYDINGR 82 (295)
Q Consensus 76 vi~~a~~ 82 (295)
|+-++|.
T Consensus 74 VvitaG~ 80 (142)
T d1o6za1 74 VVITAGI 80 (142)
T ss_dssp EEECCCC
T ss_pred EEEeccc
Confidence 9999885
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.80 E-value=0.0038 Score=44.65 Aligned_cols=88 Identities=10% Similarity=0.101 Sum_probs=47.1
Q ss_pred CCcCCcchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
+||||++|..+++.|.++++ ++..++.+.+. ..... ...-.....+..+ ..+. +.|.++
T Consensus 7 vGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~-G~~~~----------~~~~~~~~~~~~~-----~~~~--~~d~~f 68 (154)
T d2gz1a1 7 VGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GKSLK----------FKDQDITIEETTE-----TAFE--GVDIAL 68 (154)
T ss_dssp ETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGT-TCEEE----------ETTEEEEEEECCT-----TTTT--TCSEEE
T ss_pred ECCCcHHHHHHHHHHHcCCCCceEEEEecccccc-ccccc----------ccCCcccccccch-----hhhh--hhhhhh
Confidence 49999999999999988754 33333322111 11110 0111112222222 2334 789988
Q ss_pred EcccCChhcHHHHHHhC-CCCCcEEEeecccc
Q 022578 78 DINGREADEVEPILDAL-PNLEQFIYCSSAGV 108 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~-~~~~~~i~~Ss~~v 108 (295)
.+++. .....++..+ ....++|=.|+..-
T Consensus 69 ~~~~~--~~s~~~~~~~~~~~~~VIDlSsdfR 98 (154)
T d2gz1a1 69 FSAGS--STSAKYAPYAVKAGVVVVDNTSYFR 98 (154)
T ss_dssp ECSCH--HHHHHHHHHHHHTTCEEEECSSTTT
T ss_pred hccCc--cchhhHHhhhccccceehhcChhhh
Confidence 88763 2333444433 35568887776653
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=94.79 E-value=0.012 Score=43.85 Aligned_cols=83 Identities=13% Similarity=0.095 Sum_probs=56.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.++..+..... ..+ ..+++.+++. .+|+|+.++..
T Consensus 50 G~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~-------------~~~--------~~~~l~~~l~--~sDii~~~~pl 106 (197)
T d1j4aa1 50 GTGHIGQVFMQIMEGFGAKVITYDIFRNPELEK-------------KGY--------YVDSLDDLYK--QADVISLHVPD 106 (197)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH-------------TTC--------BCSCHHHHHH--HCSEEEECSCC
T ss_pred cccccchhHHHhHhhhcccccccCccccccccc-------------cee--------eecccccccc--ccccccccCCc
Confidence 579999999999998899999988765441110 111 2245777888 89998877665
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. -....+..++....+|.+|=..+
T Consensus 107 t~~T~~li~~~~l~~mk~~a~lIN~sRG~i 136 (197)
T d1j4aa1 107 VPANVHMINDESIAKMKQDVVIVNVSRGPL 136 (197)
T ss_dssp CGGGTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred cccccccccHHHHhhhCCccEEEecCchhh
Confidence 432 23555666775567777775544
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.78 E-value=0.034 Score=40.85 Aligned_cols=82 Identities=17% Similarity=0.057 Sum_probs=57.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.++....... .. .. .+.++++++ ..|+|+.++..
T Consensus 51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---------------~~--~~-----~~~l~ell~--~sDii~i~~pl 106 (188)
T d1sc6a1 51 GYGHIGTQLGILAESLGMYVYFYDIENKLPLG---------------NA--TQ-----VQHLSDLLN--MSDVVSLHVPE 106 (188)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCT---------------TC--EE-----CSCHHHHHH--HCSEEEECCCS
T ss_pred ecccchhhhhhhcccccceEeeccccccchhh---------------hh--hh-----hhhHHHHHh--hccceeecccC
Confidence 68999999999999999999999876554211 11 11 135678888 88999877665
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. -....++.++....+|.+|-..+
T Consensus 107 t~~T~~li~~~~l~~mk~~a~lIN~aRG~l 136 (188)
T d1sc6a1 107 NPSTKNMMGAKEISLMKPGSLLINASRGTV 136 (188)
T ss_dssp STTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred CcchhhhccHHHHhhCCCCCEEEEcCcHHh
Confidence 432 24667777776667887775554
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=94.77 E-value=0.013 Score=37.93 Aligned_cols=62 Identities=21% Similarity=0.271 Sum_probs=42.0
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
||+|+ +.||+.|.++|++|.+-++..+...+.+ . ..++.+..++ +++ .+. ++|.||...+
T Consensus 17 gG~GM--s~LA~~L~~~G~~VsGSD~~~~~~~~~L--------~--~~Gi~v~~g~--~~~----~i~--~~d~vV~S~A 76 (96)
T d1p3da1 17 GGAGM--SGIAEILLNEGYQISGSDIADGVVTQRL--------A--QAGAKIYIGH--AEE----HIE--GASVVVVSSA 76 (96)
T ss_dssp TSTTH--HHHHHHHHHHTCEEEEEESCCSHHHHHH--------H--HTTCEEEESC--CGG----GGT--TCSEEEECTT
T ss_pred CHHHH--HHHHHHHHhCCCEEEEEeCCCChhhhHH--------H--HCCCeEEECC--ccc----cCC--CCCEEEECCC
Confidence 45554 5689999999999999998765532221 1 2467776654 332 234 8999999888
Q ss_pred CC
Q 022578 82 RE 83 (295)
Q Consensus 82 ~~ 83 (295)
..
T Consensus 77 I~ 78 (96)
T d1p3da1 77 IK 78 (96)
T ss_dssp SC
T ss_pred cC
Confidence 74
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.75 E-value=0.025 Score=41.09 Aligned_cols=30 Identities=23% Similarity=0.414 Sum_probs=27.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|.|.+|..+++.|+++||+|++.+|++++.
T Consensus 8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~ 37 (178)
T d1pgja2 8 GLGVMGANLALNIAEKGFKVAVFNRTYSKS 37 (178)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred eehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 579999999999999999999999987763
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=94.71 E-value=0.022 Score=41.53 Aligned_cols=26 Identities=19% Similarity=0.360 Sum_probs=21.9
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEe
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFT 26 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~ 26 (295)
+||||++|..|++.|.++ .++|..+.
T Consensus 7 iGATGyvG~eLlrlL~~HP~~ei~~l~ 33 (179)
T d2g17a1 7 VGASGYAGAELVSYVNRHPHMTITALT 33 (179)
T ss_dssp ETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred ECcccHHHHHHHHHHHhCCCCceEeeE
Confidence 499999999999999997 56776654
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=94.70 E-value=0.028 Score=39.80 Aligned_cols=78 Identities=14% Similarity=0.043 Sum_probs=52.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|+|.+|+++++.|++.|++|++..|++++.... .+. .++.+. .+..++++ ++|+||-+.-
T Consensus 7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l---------~~~-~g~~~~-------~~~~~~~~--~~dvIilavk- 66 (152)
T d2ahra2 7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEI---------AEQ-LALPYA-------MSHQDLID--QVDLVILGIK- 66 (152)
T ss_dssp CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHH---------HHH-HTCCBC-------SSHHHHHH--TCSEEEECSC-
T ss_pred eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhh---------ccc-cceeee-------chhhhhhh--ccceeeeecc-
Confidence 689999999999999999999999887663211 111 122211 13456677 8999998864
Q ss_pred ChhcHHHHHHhCCCCCcEE
Q 022578 83 EADEVEPILDALPNLEQFI 101 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i 101 (295)
+.....+++.+...+.+|
T Consensus 67 -p~~~~~vl~~l~~~~~ii 84 (152)
T d2ahra2 67 -PQLFETVLKPLHFKQPII 84 (152)
T ss_dssp -GGGHHHHHTTSCCCSCEE
T ss_pred -hHhHHHHhhhcccceeEe
Confidence 456677776666444444
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=94.66 E-value=0.022 Score=41.37 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=50.5
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCe-EEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+||||++|..+++.|.++. .++..+..+... ...+ ....++. .-......+.+ ...+ ++|+||.
T Consensus 7 vGATGyvG~eLirlL~~HP~~ei~~l~s~~~a-G~~i--------~~~~p~~~~~~~~~~~~~~---~~~~--~~dvvf~ 72 (176)
T d1vkna1 7 IGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKL--------EEIFPSTLENSILSEFDPE---KVSK--NCDVLFT 72 (176)
T ss_dssp ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBH--------HHHCGGGCCCCBCBCCCHH---HHHH--HCSEEEE
T ss_pred ECCCcHHHHHHHHHHHhCCCceEEEeeccccC-CCcc--------cccCchhhccccccccCHh---Hhcc--ccceEEE
Confidence 4999999999999999864 577776544332 1111 0001110 00111122333 3445 7999998
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEeeccccc
Q 022578 79 INGREADEVEPILDALPNLEQFIYCSSAGVY 109 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~Ss~~v~ 109 (295)
+..... ...++...++ .++|=+|+..-+
T Consensus 73 a~p~~~--s~~~~~~~~~-~~VIDlSadfRl 100 (176)
T d1vkna1 73 ALPAGA--SYDLVRELKG-VKIIDLGADFRF 100 (176)
T ss_dssp CCSTTH--HHHHHTTCCS-CEEEESSSTTTC
T ss_pred ccccHH--HHHHHHhhcc-ceEEecCccccc
Confidence 876532 3344443333 477877776543
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=94.65 E-value=0.017 Score=42.20 Aligned_cols=90 Identities=13% Similarity=0.152 Sum_probs=56.9
Q ss_pred CcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCe-EEEEecCCChHH----HHHhhhcCCCcE
Q 022578 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDF----VKSSLSAKGFDV 75 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~----~~~~~~~~~~d~ 75 (295)
|+ |-+|...++.+...|. +|+++++++++... .++ -+. .++...-.+... +.+.....++|+
T Consensus 36 Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~---------a~~--lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dv 103 (182)
T d1vj0a2 36 GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKL---------AEE--IGADLTLNRRETSVEERRKAIMDITHGRGADF 103 (182)
T ss_dssp CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHH---------HHH--TTCSEEEETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred CC-Cccchhheecccccccccccccccccccccc---------ccc--ccceEEEeccccchHHHHHHHHHhhCCCCceE
Confidence 54 8899999999999997 89999998876321 011 122 233222223222 333333357999
Q ss_pred EEEcccCChhcHHHHHHhCCCCCcEEEee
Q 022578 76 VYDINGREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 76 vi~~a~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
||.+.|. .......++.++...+++.++
T Consensus 104 vid~vG~-~~~~~~a~~~l~~~G~iv~~G 131 (182)
T d1vj0a2 104 ILEATGD-SRALLEGSELLRRGGFYSVAG 131 (182)
T ss_dssp EEECSSC-TTHHHHHHHHEEEEEEEEECC
T ss_pred EeecCCc-hhHHHHHHHHhcCCCEEEEEe
Confidence 9999875 345667778888445777765
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.63 E-value=0.039 Score=40.94 Aligned_cols=82 Identities=15% Similarity=0.071 Sum_probs=57.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.++....... ..+. ..++.++++ .+|+|+.+...
T Consensus 52 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------------~~~~--------~~~l~~l~~--~~D~v~~~~pl 107 (199)
T d1dxya1 52 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH--------------PDFD--------YVSLEDLFK--QSDVIDLHVPG 107 (199)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCSSCC--------------TTCE--------ECCHHHHHH--HCSEEEECCCC
T ss_pred ecccccccccccccccceeeeccCCccchhhh--------------cchh--------HHHHHHHHH--hcccceeeecc
Confidence 68999999999999999999999987654211 1221 124667888 89999987665
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. -....+..++....+|.+|=..+
T Consensus 108 t~~T~~li~~~~l~~mk~~a~lIN~aRG~v 137 (199)
T d1dxya1 108 IEQNTHIINEAAFNLMKPGAIVINTARPNL 137 (199)
T ss_dssp CGGGTTSBCHHHHHHSCTTEEEEECSCTTS
T ss_pred cccccccccHHHhhccCCceEEEecccHhh
Confidence 433 13456677776667887775444
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.62 E-value=0.015 Score=35.96 Aligned_cols=31 Identities=26% Similarity=0.251 Sum_probs=28.6
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
+||+|-+|...++.+...|++|+++++++++
T Consensus 38 ~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k 68 (77)
T d1o8ca2 38 TGASGGVGSTAVALLHKLGYQVVAVSGREST 68 (77)
T ss_dssp SSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred EeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 5899999999999888899999999998877
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=94.41 E-value=0.099 Score=35.58 Aligned_cols=86 Identities=9% Similarity=0.144 Sum_probs=56.0
Q ss_pred CCcCCcchHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhh---cCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~---~~~~d~v 76 (295)
.|++|-+|+.|.+.+.+.|+++.+.. ++... .+ .+.+ +..|++.|+.+.+.++ +.+.-.|
T Consensus 6 ~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~---~~------------~~~D-VvIDFS~p~~~~~~l~~~~~~~~p~V 69 (128)
T d1vm6a3 6 VGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE---EL------------DSPD-VVIDFSSPEALPKTVDLCKKYRAGLV 69 (128)
T ss_dssp ETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE---EC------------SCCS-EEEECSCGGGHHHHHHHHHHHTCEEE
T ss_pred ECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH---Hh------------ccCC-EEEEecCHHHHHHHHHHHHhcCCCEE
Confidence 48999999999999999999887643 32221 11 2233 3458888766655543 2577788
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEe
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYC 103 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~ 103 (295)
+-..|.+.+....+-++++.. .+++.
T Consensus 70 iGTTG~~~~~~~~i~~~ak~~-pv~~a 95 (128)
T d1vm6a3 70 LGTTALKEEHLQMLRELSKEV-PVVQA 95 (128)
T ss_dssp ECCCSCCHHHHHHHHHHTTTS-EEEEC
T ss_pred EEcCCCCHHHHHHHHHHHhhC-CEEee
Confidence 888887776666666666543 44443
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=94.40 E-value=0.04 Score=40.17 Aligned_cols=75 Identities=17% Similarity=0.144 Sum_probs=52.3
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|+|..|++++..|.+.|. +++++.|+++...+... ....+... -.......++.+.+.+...+. .+|+|||+..
T Consensus 25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~--l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~diiIN~Tp 99 (182)
T d1vi2a1 25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA--FAQRVNEN-TDCVVTVTDLADQQAFAEALA--SADILTNGTK 99 (182)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH--HHHHHHHH-SSCEEEEEETTCHHHHHHHHH--TCSEEEECSS
T ss_pred CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHH--HHHHHHhh-cCcceEeeecccccchhhhhc--ccceeccccC
Confidence 468889999999999986 78889998776321110 00001111 234456788889999988888 9999999975
Q ss_pred C
Q 022578 82 R 82 (295)
Q Consensus 82 ~ 82 (295)
.
T Consensus 100 ~ 100 (182)
T d1vi2a1 100 V 100 (182)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=94.27 E-value=0.014 Score=41.11 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=43.7
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhh-hhccCCeEEEEecCCChHHHHHhhhcCCCcEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi 77 (295)
+| +|++|..++..|+.+| .+|.+++++......... +..- ........+..+|. + .++ ++|+||
T Consensus 11 IG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~---Dl~~a~~~~~~~~~~~~d~---~----~~~--~adivv 77 (146)
T d1ez4a1 11 VG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDAL---DLEDAQAFTAPKKIYSGEY---S----DCK--DADLVV 77 (146)
T ss_dssp EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH---HHHGGGGGSCCCEEEECCG---G----GGT--TCSEEE
T ss_pred EC-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHH---HHhccccccCCceEeeccH---H----Hhc--cccEEE
Confidence 36 5999999999999987 589999988754211000 0000 11123344555543 2 345 999999
Q ss_pred EcccC
Q 022578 78 DINGR 82 (295)
Q Consensus 78 ~~a~~ 82 (295)
.++|.
T Consensus 78 itag~ 82 (146)
T d1ez4a1 78 ITAGA 82 (146)
T ss_dssp ECCCC
T ss_pred Eeccc
Confidence 99886
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=94.25 E-value=0.018 Score=41.78 Aligned_cols=91 Identities=14% Similarity=0.067 Sum_probs=57.1
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC-hHHHHHhhhcCCCcEEEEcc
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~a 80 (295)
|.|.+|...++.+...|. +|+++++++++... .....-.+++..+-.+ .+.+.+.....++|+||.++
T Consensus 35 GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~----------a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~ 104 (174)
T d1jqba2 35 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEA----------AKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAG 104 (174)
T ss_dssp CCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHH----------HHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred cCCcchhhhhhhhhcccccccccccchhhhHHH----------HHhhCccccccccchhHHHHHHHHhhccCcceEEEcc
Confidence 359999999888888896 79999888766321 1111222333222112 34455555445799999999
Q ss_pred cCChhcHHHHHHhCCCCCcEEEee
Q 022578 81 GREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
|.. ......++.++...+++.++
T Consensus 105 g~~-~~~~~a~~~~~~~G~iv~~G 127 (174)
T d1jqba2 105 GGS-ETLSQAVKMVKPGGIISNIN 127 (174)
T ss_dssp SCT-THHHHHHHHEEEEEEEEECC
T ss_pred CCH-HHHHHHHHHHhcCCEEEEEe
Confidence 853 34566677777555777765
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=94.19 E-value=0.0043 Score=39.73 Aligned_cols=62 Identities=15% Similarity=0.037 Sum_probs=41.0
Q ss_pred CcCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
||+|+-| |++.|.++|++|.+-++..+...+.+ . ..++.+..+. +++. +. +.|.||...+
T Consensus 10 gG~GMs~--LA~~L~~~G~~VsGSD~~~~~~t~~L--------~--~~Gi~i~~gh--~~~~----i~--~~d~vV~SsA 69 (89)
T d1j6ua1 10 GGIGMSA--VALHEFSNGNDVYGSNIEETERTAYL--------R--KLGIPIFVPH--SADN----WY--DPDLVIKTPA 69 (89)
T ss_dssp TSHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHH--------H--HTTCCEESSC--CTTS----CC--CCSEEEECTT
T ss_pred CHHHHHH--HHHHHHhCCCeEEEEeCCCChhHHHH--------H--HCCCeEEeee--cccc----cC--CCCEEEEecC
Confidence 4555544 78999999999999998865532222 1 2467665542 3322 24 7999999988
Q ss_pred CC
Q 022578 82 RE 83 (295)
Q Consensus 82 ~~ 83 (295)
+.
T Consensus 70 I~ 71 (89)
T d1j6ua1 70 VR 71 (89)
T ss_dssp CC
T ss_pred cC
Confidence 74
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.11 E-value=0.011 Score=43.52 Aligned_cols=95 Identities=17% Similarity=0.195 Sum_probs=55.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCC-------------CCchhhhhccCCeEEEEecCCChHHHHHhhh
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-------------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLS 69 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 69 (295)
|+|.+|+.++..++..|++|++++++++........ ...........++.. ..| . +.+.
T Consensus 11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~-~~~---~----~~~~ 82 (186)
T d1wdka3 11 GAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP-TLS---Y----GDFG 82 (186)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE-ESS---S----TTGG
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeec-ccc---c----cccc
Confidence 469999999999999999999999987653211100 000000000011111 111 1 1234
Q ss_pred cCCCcEEEEcccCChhcHHHHHHhCC--CCCcEEEeeccc
Q 022578 70 AKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAG 107 (295)
Q Consensus 70 ~~~~d~vi~~a~~~~~~~~~ll~~~~--~~~~~i~~Ss~~ 107 (295)
++|.||.+...+.+.-+.+...+. -.+..|+.|+++
T Consensus 83 --~adlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSnTS 120 (186)
T d1wdka3 83 --NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTS 120 (186)
T ss_dssp --GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCS
T ss_pred --ccceeeeeecchHHHHHHHHHHHHhhcCCCeeEEeccc
Confidence 899999999888777666666654 223444445444
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.02 E-value=0.049 Score=39.61 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=55.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc-ccCCCCC-CchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGE-SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
|+|..|.+++..|.+.|++|++..|..+.. ....... .... .....-..++.-.+++.++++ +.|+||.+.
T Consensus 7 GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~--~ad~Ii~av 79 (180)
T d1txga2 7 GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPR-----LGVKLNGVEIFWPEQLEKCLE--NAEVVLLGV 79 (180)
T ss_dssp SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTT-----TTBCCCSEEEECGGGHHHHHT--TCSEEEECS
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhh-----hcchhccccccccccHHHHHh--ccchhhccc
Confidence 579999999999999999999998854331 0000000 0000 011111112233456778888 999999876
Q ss_pred cCChhcHHHHHHhCC---CCCcEEEee
Q 022578 81 GREADEVEPILDALP---NLEQFIYCS 104 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~---~~~~~i~~S 104 (295)
. ....+.+++.+. ..+.+|.++
T Consensus 80 p--s~~~~~~~~~l~~~l~~~~ii~~t 104 (180)
T d1txga2 80 S--TDGVLPVMSRILPYLKDQYIVLIS 104 (180)
T ss_dssp C--GGGHHHHHHHHTTTCCSCEEEECC
T ss_pred c--hhhhHHHHHhhccccccceecccc
Confidence 4 567788887765 333444443
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=94.02 E-value=0.013 Score=43.06 Aligned_cols=93 Identities=15% Similarity=0.256 Sum_probs=48.9
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+||||++|..+++.|.++. .++..+..+.+. ...+ ....+... ...+..........+. ++|+||.+
T Consensus 11 lGATGyvG~elirLL~~HP~~ei~~l~S~~~a-G~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~--~~Dvvf~a 78 (183)
T d2cvoa1 11 LGASGYTGAEIVRLLANHPQFRIKVMTADRKA-GEQF--------GSVFPHLI-TQDLPNLVAVKDADFS--NVDAVFCC 78 (183)
T ss_dssp ESCSSHHHHHHHHHHTTCSSEEEEEEECSTTT-TSCH--------HHHCGGGT-TSCCCCCBCGGGCCGG--GCSEEEEC
T ss_pred ECcccHHHHHHHHHHHhCCCceEEEEeccccC-CCcc--------cccccccc-ccccccchhhhhhhhc--ccceeeec
Confidence 4999999999999999874 577666533222 1111 00000000 0011111112223445 89999988
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEeeccc
Q 022578 80 NGREADEVEPILDALPNLEQFIYCSSAG 107 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~Ss~~ 107 (295)
.... ....++..+......|-.|+..
T Consensus 79 lp~~--~s~~~~~~l~~~~~~v~~~~~~ 104 (183)
T d2cvoa1 79 LPHG--TTQEIIKGLPQELKIVDLSADF 104 (183)
T ss_dssp CSSS--HHHHHHHTSCSSCEEEECSSTT
T ss_pred cccc--hHHHHHHHHHhcCcccccchhh
Confidence 7543 4445566555334556555544
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=93.98 E-value=0.014 Score=40.84 Aligned_cols=70 Identities=19% Similarity=0.240 Sum_probs=40.2
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|+ |.+|+.++..|+.++. ++.+++++++..........+ -.........+.+| . +.++ ++|+|+-
T Consensus 7 IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~--~~~~~~~~~~~~~~---~----~~~~--~adivvi 74 (142)
T d1y6ja1 7 IGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH--GLPFMGQMSLYAGD---Y----SDVK--DCDVIVV 74 (142)
T ss_dssp ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT--SCCCTTCEEEC--C---G----GGGT--TCSEEEE
T ss_pred ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeecc--CcccCCCeeEeeCc---H----HHhC--CCceEEE
Confidence 465 9999999999999874 899999887653211000000 00111233333332 2 3455 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 75 tag~ 78 (142)
T d1y6ja1 75 TAGA 78 (142)
T ss_dssp CCCC
T ss_pred eccc
Confidence 9886
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=93.85 E-value=0.014 Score=42.03 Aligned_cols=87 Identities=14% Similarity=0.138 Sum_probs=58.8
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccCC
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~ 83 (295)
.|-+|...++.+...|.+++++++++++... ..+ -+.+.+ .|..+.+......+ ++|++|.+.+..
T Consensus 39 aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~---------a~~--lGad~~-i~~~~~~~~~~~~~--~~D~vid~~g~~ 104 (168)
T d1uufa2 39 IGGLGHMGIKLAHAMGAHVVAFTTSEAKREA---------AKA--LGADEV-VNSRNADEMAAHLK--SFDFILNTVAAP 104 (168)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHH--HTCSEE-EETTCHHHHHTTTT--CEEEEEECCSSC
T ss_pred cchHHHHHHHHhhcccccchhhccchhHHHH---------Hhc--cCCcEE-EECchhhHHHHhcC--CCceeeeeeecc
Confidence 4889999998888899999999988776321 011 123322 36667766666666 899999998753
Q ss_pred hhcHHHHHHhCCCCCcEEEeec
Q 022578 84 ADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 84 ~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
......++.++...+++.++.
T Consensus 105 -~~~~~~~~~l~~~G~iv~~G~ 125 (168)
T d1uufa2 105 -HNLDDFTTLLKRDGTMTLVGA 125 (168)
T ss_dssp -CCHHHHHTTEEEEEEEEECCC
T ss_pred -hhHHHHHHHHhcCCEEEEecc
Confidence 345555666664457777653
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.82 E-value=0.0099 Score=42.98 Aligned_cols=88 Identities=13% Similarity=0.084 Sum_probs=54.2
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccCC
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~ 83 (295)
+|.+|...++.+...|.+|+++++++++... .++. +.+.+.....+.+..+.... ++|+|+.+.+..
T Consensus 36 aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~---------a~~l--Ga~~~i~~~~~~~~~~~~~~--~~d~vi~~~~~~ 102 (168)
T d1piwa2 36 LGGIGSMGTLISKAMGAETYVISRSSRKRED---------AMKM--GADHYIATLEEGDWGEKYFD--TFDLIVVCASSL 102 (168)
T ss_dssp CSHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHH--TCSEEEEGGGTSCHHHHSCS--CEEEEEECCSCS
T ss_pred CCCcchhHHHHhhhccccccccccchhHHHH---------hhcc--CCcEEeeccchHHHHHhhhc--ccceEEEEecCC
Confidence 4899999888888889999999998876321 1111 23332222223344455555 899999997764
Q ss_pred hhc-HHHHHHhCCCCCcEEEee
Q 022578 84 ADE-VEPILDALPNLEQFIYCS 104 (295)
Q Consensus 84 ~~~-~~~ll~~~~~~~~~i~~S 104 (295)
... ....++.++...+++.++
T Consensus 103 ~~~~~~~~~~~l~~~G~iv~~G 124 (168)
T d1piwa2 103 TDIDFNIMPKAMKVGGRIVSIS 124 (168)
T ss_dssp TTCCTTTGGGGEEEEEEEEECC
T ss_pred ccchHHHHHHHhhccceEEEec
Confidence 332 233455555334777665
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=93.73 E-value=0.094 Score=36.57 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=22.8
Q ss_pred CCcCCcchHHHHHHHHH-C--CCeEEEEecCC
Q 022578 1 MGGTRFIGVFLSRLLVK-E--GHQVTLFTRGK 29 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~-~--g~~V~~~~r~~ 29 (295)
+|++|.+|++++..|.. . ..++..++..+
T Consensus 6 iGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~ 37 (145)
T d2cmda1 6 LGAAGGIGQALALLLKTQLPSGSELSLYDIAP 37 (145)
T ss_dssp ETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred EcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence 58899999999988754 3 46888888654
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=93.56 E-value=0.061 Score=38.79 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=51.8
Q ss_pred CCcchHHHHHHHHHCCCeE-EEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHH--hhhcCCCcEEEEcc
Q 022578 4 TRFIGVFLSRLLVKEGHQV-TLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS--SLSAKGFDVVYDIN 80 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~--~~~~~~~d~vi~~a 80 (295)
.|.+|...++.+...|.++ ++.++++.+.. +.....-.+++. ..+.+..++ .+...++|+||.+.
T Consensus 37 ~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~----------~a~~~Ga~~~i~--~~~~~~~~~i~~~t~gg~D~vid~~ 104 (174)
T d1f8fa2 37 AGAVGLSALLAAKVCGASIIIAVDIVESRLE----------LAKQLGATHVIN--SKTQDPVAAIKEITDGGVNFALEST 104 (174)
T ss_dssp CSHHHHHHHHHHHHHTCSEEEEEESCHHHHH----------HHHHHTCSEEEE--TTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCHHHhhhhhcccccccceeeeeccHHHHHH----------HHHHcCCeEEEe--CCCcCHHHHHHHHcCCCCcEEEEcC
Confidence 4899999998888888755 45555554421 111122234443 333322222 22224799999998
Q ss_pred cCChhcHHHHHHhCCCCCcEEEeec
Q 022578 81 GREADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
|. .......++.++...++++++.
T Consensus 105 G~-~~~~~~~~~~~~~~G~i~~~G~ 128 (174)
T d1f8fa2 105 GS-PEILKQGVDALGILGKIAVVGA 128 (174)
T ss_dssp CC-HHHHHHHHHTEEEEEEEEECCC
T ss_pred Cc-HHHHHHHHhcccCceEEEEEee
Confidence 84 3444556676774457877663
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=93.54 E-value=0.013 Score=43.33 Aligned_cols=85 Identities=11% Similarity=0.052 Sum_probs=55.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.++........ ..++ ...+++.++++ .+|+|+.+...
T Consensus 56 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~------------~~~~-------~~~~~l~~ll~--~sD~i~~~~pl 114 (193)
T d1mx3a1 56 GLGRVGQAVALRAKAFGFNVLFYDPYLSDGVER------------ALGL-------QRVSTLQDLLF--HSDCVTLHCGL 114 (193)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHH------------HHTC-------EECSSHHHHHH--HCSEEEECCCC
T ss_pred ccccccccceeeeeccccceeeccCcccccchh------------hhcc-------ccccchhhccc--cCCEEEEeecc
Confidence 579999999999999999999998875541100 0011 12235677888 88988876654
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. -....+..++....+|.+|-..+
T Consensus 115 t~~T~~li~~~~l~~mk~~a~lIN~sRG~i 144 (193)
T d1mx3a1 115 NEHNHHLINDFTVKQMRQGAFLVNTARGGL 144 (193)
T ss_dssp CTTCTTSBSHHHHTTSCTTEEEEECSCTTS
T ss_pred cccchhhhhHHHHhccCCCCeEEecCCceE
Confidence 332 13445666665557777775444
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.42 E-value=0.0098 Score=42.07 Aligned_cols=67 Identities=19% Similarity=0.322 Sum_probs=42.9
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhh---hc-cCCeEEEEecCCChHHHHHhhhcCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFA---EF-SSKILHLKGDRKDYDFVKSSLSAKGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~---~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d 74 (295)
+|+ |.+|+.++..|+.+|. ++.++++.++...... ..+. .. ...+.+...|. +.++ ++|
T Consensus 12 iGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a-----~Dl~~~~~~~~~~~~~~~~d~-------~~l~--daD 76 (148)
T d1ldna1 12 IGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDA-----MDFNHGKVFAPKPVDIWHGDY-------DDCR--DAD 76 (148)
T ss_dssp ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHH-----HHHHHHTTSSSSCCEEEECCG-------GGTT--TCS
T ss_pred ECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchh-----ccHhhCccccCCCeEEEECCH-------HHhc--cce
Confidence 475 9999999999998874 7999998776521110 0010 01 12344444443 3466 999
Q ss_pred EEEEcccC
Q 022578 75 VVYDINGR 82 (295)
Q Consensus 75 ~vi~~a~~ 82 (295)
+||.++|.
T Consensus 77 vvvitag~ 84 (148)
T d1ldna1 77 LVVICAGA 84 (148)
T ss_dssp EEEECCSC
T ss_pred eEEEeccc
Confidence 99999886
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=93.07 E-value=0.015 Score=42.98 Aligned_cols=86 Identities=14% Similarity=0.081 Sum_probs=56.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|.+.++......... .. .....+++.++++ .+|+|+.+...
T Consensus 54 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-------------~~-----~~~~~~~l~~ll~--~sD~v~l~~pl 113 (191)
T d1gdha1 54 GFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-------------SY-----QATFHDSLDSLLS--VSQFFSLNAPS 113 (191)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-------------HH-----TCEECSSHHHHHH--HCSEEEECCCC
T ss_pred ecccchHHHHHHHHhhccccccccccccccchhh-------------cc-----cccccCCHHHHHh--hCCeEEecCCC
Confidence 5799999999999999999999887655421100 00 0012245778888 89999877655
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....||.+|=..+
T Consensus 114 t~~T~~li~~~~l~~mk~~a~lIN~sRG~i 143 (191)
T d1gdha1 114 TPETRYFFNKATIKSLPQGAIVVNTARGDL 143 (191)
T ss_dssp CTTTTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred CchHhheecHHHhhCcCCccEEEecCCccc
Confidence 432 23556666775567787775554
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=93.03 E-value=0.036 Score=37.90 Aligned_cols=66 Identities=15% Similarity=0.071 Sum_probs=49.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|-|-+|..+++.| ++++|.++..++...... ...++.++.||.++++.++++-- .+.+.++-+...
T Consensus 7 G~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~-----------~~~~~~~i~Gd~~~~~~L~~a~i-~~A~~vi~~~~~ 72 (129)
T d2fy8a1 7 GWSESTLECLREL--RGSEVFVLAEDENVRKKV-----------LRSGANFVHGDPTRVSDLEKANV-RGARAVIVNLES 72 (129)
T ss_dssp SCCHHHHHHHHTS--CGGGEEEEESCTTHHHHH-----------HHTTCEEEESCTTSHHHHHHTTC-TTCSEEEECCSS
T ss_pred CCCHHHHHHHHHH--cCCCCEEEEcchHHHHHH-----------HhcCccccccccCCHHHHHHhhh-hcCcEEEEeccc
Confidence 4688999999998 467788888877763211 12589999999999998877533 378899877643
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=92.62 E-value=0.19 Score=31.88 Aligned_cols=65 Identities=11% Similarity=0.113 Sum_probs=44.0
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccCC
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE 83 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~ 83 (295)
-|-.|.++++.|.++|++|++.+.+......... ...+.++.+.. +. ..+. ++|.||-.-|..
T Consensus 13 lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~----------~~~~~~~~~~~-~~----~~~~--~~d~vi~SPGi~ 75 (93)
T d2jfga1 13 LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL----------PEAVERHTGSL-ND----EWLM--AADLIVASPGIA 75 (93)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS----------CTTSCEEESBC-CH----HHHH--HCSEEEECTTSC
T ss_pred ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH----------hhccceeeccc-ch----hhhc--cCCEEEECCCCC
Confidence 4778999999999999999999987654221111 13455555543 22 2345 789999988875
Q ss_pred hh
Q 022578 84 AD 85 (295)
Q Consensus 84 ~~ 85 (295)
..
T Consensus 76 ~~ 77 (93)
T d2jfga1 76 LA 77 (93)
T ss_dssp TT
T ss_pred CC
Confidence 43
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.60 E-value=0.15 Score=40.00 Aligned_cols=29 Identities=14% Similarity=0.212 Sum_probs=26.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
.||..|..|+++|+.+|++|+.+.+..+-
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g~~s~ 72 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYRARSA 72 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred CchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 58999999999999999999999877544
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=92.52 E-value=0.021 Score=42.08 Aligned_cols=86 Identities=12% Similarity=0.015 Sum_probs=54.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|...+|......... ..++ ....++.++++ .+|+|+.+...
T Consensus 51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-----------~~~~-------~~~~~l~~~l~--~sD~v~~~~pl 110 (188)
T d2naca1 51 AAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-----------ELNL-------TWHATREDMYP--VCDVVTLNCPL 110 (188)
T ss_dssp CCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-----------HHTC-------EECSSHHHHGG--GCSEEEECSCC
T ss_pred cccccchhhhhhhhccCceEEEEeeccccccccc-----------cccc-------cccCCHHHHHH--hccchhhcccc
Confidence 6899999999999999999999998754421100 0011 12244567787 88888766554
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.. -....++.++....||.+|-..+
T Consensus 111 t~~T~~li~~~~l~~mk~ga~lIN~aRG~i 140 (188)
T d2naca1 111 HPETEHMINDETLKLFKRGAYIVNTARGKL 140 (188)
T ss_dssp CTTTTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred cccchhhhHHHHHHhCCCCCEEEecCchhh
Confidence 332 13445555664456777665544
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=92.50 E-value=0.038 Score=38.53 Aligned_cols=72 Identities=13% Similarity=0.047 Sum_probs=43.5
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|| |.+|+.++..|+..+ .++.++++++...........+ .........++... .+. +.++ ++|+|+-
T Consensus 6 IGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~-~~~~~~~~~~i~~~--~~~----~~~~--dadvvvi 75 (142)
T d1guza1 6 IGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYE-SGPVGLFDTKVTGS--NDY----ADTA--NSDIVII 75 (142)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHT-THHHHTCCCEEEEE--SCG----GGGT--TCSEEEE
T ss_pred ECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhc-ccchhcccceEEec--CCH----HHhc--CCeEEEE
Confidence 475 999999999999987 5899999887663211000000 00111123444432 233 3456 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 76 tag~ 79 (142)
T d1guza1 76 TAGL 79 (142)
T ss_dssp CCSC
T ss_pred EEec
Confidence 9986
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=92.34 E-value=0.064 Score=38.43 Aligned_cols=91 Identities=12% Similarity=0.155 Sum_probs=54.7
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhh---hcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~---~~~~~d~v 76 (295)
+|++|-+|...++.+...| .+|++.++++++... ..+ ..-..++. ..+.+..++.. ...++|+|
T Consensus 34 ~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~---------~~~-~Ga~~~i~--~~~~~~~~~~~~~~~~~~~d~v 101 (170)
T d1jvba2 34 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA---------AKR-AGADYVIN--ASMQDPLAEIRRITESKGVDAV 101 (170)
T ss_dssp ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH---------HHH-HTCSEEEE--TTTSCHHHHHHHHTTTSCEEEE
T ss_pred EeccccceeeeeecccccccccccccccchhhHHH---------HHH-cCCceeec--cCCcCHHHHHHHHhhcccchhh
Confidence 4788999999999998888 588888888766221 111 11123333 33333333333 33479999
Q ss_pred EEcccCChhcHHHHHHhCCCCCcEEEee
Q 022578 77 YDINGREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
|++++. .......+++++...+++.++
T Consensus 102 id~~g~-~~~~~~a~~~l~~~G~iv~~G 128 (170)
T d1jvba2 102 IDLNNS-EKTLSVYPKALAKQGKYVMVG 128 (170)
T ss_dssp EESCCC-HHHHTTGGGGEEEEEEEEECC
T ss_pred hccccc-chHHHhhhhhcccCCEEEEec
Confidence 999863 223334455566345777765
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=92.21 E-value=0.021 Score=39.98 Aligned_cols=71 Identities=18% Similarity=0.176 Sum_probs=43.1
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|+ |.+|+.++..|+.+|. ++.++++++......... ...-..+.....+...+ +.+ .++ +.|+||.
T Consensus 7 IGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~D--l~~a~~~~~~~~i~~~~--~~~----~~~--daDvVVi 75 (143)
T d1llda1 7 IGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLD--MQHGSSFYPTVSIDGSD--DPE----ICR--DADMVVI 75 (143)
T ss_dssp ECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHH--HHHTGGGSTTCEEEEES--CGG----GGT--TCSEEEE
T ss_pred ECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHH--HHhccccCCCceeecCC--CHH----Hhh--CCcEEEE
Confidence 475 9999999999999874 899888877553211000 00001122334443332 222 455 8999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 76 taG~ 79 (143)
T d1llda1 76 TAGP 79 (143)
T ss_dssp CCCC
T ss_pred eccc
Confidence 9987
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=92.10 E-value=0.35 Score=31.73 Aligned_cols=85 Identities=14% Similarity=0.098 Sum_probs=56.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|+|.+|..-++.|++.|.+|++++.........+ ....++++....+.+. .+. +++.|+.+.+
T Consensus 19 G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~-----dl~--~~~lv~~at~- 81 (113)
T d1pjqa1 19 GGGDVAERKARLLLEAGARLTVNALTFIPQFTVW---------ANEGMLTLVEGPFDET-----LLD--SCWLAIAATD- 81 (113)
T ss_dssp CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHH---------HTTTSCEEEESSCCGG-----GGT--TCSEEEECCS-
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHH---------HhcCCceeeccCCCHH-----HhC--CCcEEeecCC-
Confidence 5799999999999999999999987665522111 1124677887666432 345 8888887654
Q ss_pred ChhcHHHHHHhCCCCCcEEEee
Q 022578 83 EADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~i~~S 104 (295)
+..-...+.+.|+....+|++.
T Consensus 82 d~~~n~~i~~~a~~~~ilVNv~ 103 (113)
T d1pjqa1 82 DDTVNQRVSDAAESRRIFCNVV 103 (113)
T ss_dssp CHHHHHHHHHHHHHTTCEEEET
T ss_pred CHHHHHHHHHHHHHcCCEEEeC
Confidence 3344456666666444566654
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=92.09 E-value=0.08 Score=37.60 Aligned_cols=63 Identities=21% Similarity=0.155 Sum_probs=44.6
Q ss_pred CcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcc
Q 022578 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a 80 (295)
| +|-+|..+++.|.+.|. +|++..|+.++.... .... +.+. .+.+++.+.+. ++|+||.+.
T Consensus 31 G-aG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l---------~~~~-~~~~-----~~~~~~~~~l~--~~Divi~at 92 (159)
T d1gpja2 31 G-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVEL---------ARDL-GGEA-----VRFDELVDHLA--RSDVVVSAT 92 (159)
T ss_dssp S-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH---------HHHH-TCEE-----CCGGGHHHHHH--TCSEEEECC
T ss_pred C-CCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHH---------HHhh-hccc-----ccchhHHHHhc--cCCEEEEec
Confidence 5 49999999999999997 688888887663211 1111 2222 23456777888 999999997
Q ss_pred cC
Q 022578 81 GR 82 (295)
Q Consensus 81 ~~ 82 (295)
+.
T Consensus 93 ss 94 (159)
T d1gpja2 93 AA 94 (159)
T ss_dssp SS
T ss_pred CC
Confidence 65
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=91.77 E-value=0.12 Score=34.82 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=27.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|++|..++..|.++|.+|+++.|.+.-.
T Consensus 37 GgG~iG~E~A~~l~~~g~~Vtli~~~~~~l 66 (121)
T d1d7ya2 37 GGGVIGLELAATARTAGVHVSLVETQPRLM 66 (121)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CcchhHHHHHHHhhcccceEEEEeeccccc
Confidence 689999999999999999999999987653
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.71 E-value=0.39 Score=32.76 Aligned_cols=80 Identities=15% Similarity=0.217 Sum_probs=45.7
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhh---hcCCCcEE
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVV 76 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~---~~~~~d~v 76 (295)
.|++|-+|+.+++.+.+. ++++.+..-..+.... .. ..+.+ +..|++.|+.+.+.+ .+.++-.|
T Consensus 5 ~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~---------~~--~~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~V 72 (135)
T d1yl7a1 5 LGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSL---------LT--DGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV 72 (135)
T ss_dssp ETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHH---------HH--TTTCS-EEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhh---------hc--cccCC-EEEEcccHHHHHHHHHHHHhcCCCEE
Confidence 489999999999998775 6777664322111000 00 02233 345677665554433 22466777
Q ss_pred EEcccCChhcHHHHHH
Q 022578 77 YDINGREADEVEPILD 92 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~ 92 (295)
+-..|...+....+-+
T Consensus 73 iGTTG~~~~~~~~l~~ 88 (135)
T d1yl7a1 73 VGTTGFTAERFQQVES 88 (135)
T ss_dssp ECCCCCCHHHHHHHHH
T ss_pred EeccccchhHHHHHHH
Confidence 7777766555555544
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=91.52 E-value=0.44 Score=33.67 Aligned_cols=26 Identities=19% Similarity=0.114 Sum_probs=21.0
Q ss_pred CCcCCcchHHHHHHHHHC-CCeEEEEe
Q 022578 1 MGGTRFIGVFLSRLLVKE-GHQVTLFT 26 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~-g~~V~~~~ 26 (295)
.|++|.+|+.+++.+.+. +.++.+..
T Consensus 10 ~Ga~GrMG~~i~~~i~~~~~~~lv~~~ 36 (162)
T d1diha1 10 AGAGGRMGRQLIQAALALEGVQLGAAL 36 (162)
T ss_dssp TTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred ECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 489999999999999886 66765544
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=91.49 E-value=0.012 Score=42.95 Aligned_cols=73 Identities=14% Similarity=0.049 Sum_probs=39.8
Q ss_pred CCcCCcchHHHHHHHHHCC-------CeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCC
Q 022578 1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKG 72 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~ 72 (295)
+||+|.||++++..|++.+ ..++.++....... ... ...++... .+...-+..- ++ ..+.++ +
T Consensus 30 ~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~-l~g--~~mdl~d~a~~~~~~~~~~-~~---~~~~~~--~ 100 (175)
T d7mdha1 30 SGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQA-LEG--VAMELEDSLYPLLREVSIG-ID---PYEVFE--D 100 (175)
T ss_dssp ETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHH-HHH--HHHHHHTTTCTTEEEEEEE-SC---HHHHTT--T
T ss_pred ECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccch-hcc--hhhhhcccccccccCcccc-cc---chhhcc--C
Confidence 6999999999999998752 24555555443310 000 00001111 1222222211 12 346777 9
Q ss_pred CcEEEEcccC
Q 022578 73 FDVVYDINGR 82 (295)
Q Consensus 73 ~d~vi~~a~~ 82 (295)
.|+||-++|.
T Consensus 101 aDvVvi~ag~ 110 (175)
T d7mdha1 101 VDWALLIGAK 110 (175)
T ss_dssp CSEEEECCCC
T ss_pred CceEEEeecc
Confidence 9999999987
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=91.48 E-value=0.11 Score=37.30 Aligned_cols=91 Identities=18% Similarity=0.150 Sum_probs=54.6
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|+|.+|...++.+...|. .|++.++++.+... .......+++..+-.+.+.+.+.....++|+||.++|
T Consensus 40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~----------~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g 109 (172)
T d1h2ba2 40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKLKL----------AERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVG 109 (172)
T ss_dssp CCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHH----------HHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCChHHHHHHHHHHhhcCcccccccchhHHHHH----------HhhcccceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence 469999999998887774 66777777655221 1112234444433223344444444457999999988
Q ss_pred CChhcHHHHHHhCCCCCcEEEee
Q 022578 82 READEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
.. ......++.++...+++.++
T Consensus 110 ~~-~~~~~a~~~l~~~G~iv~~G 131 (172)
T d1h2ba2 110 SQ-ATVDYTPYLLGRMGRLIIVG 131 (172)
T ss_dssp CH-HHHHHGGGGEEEEEEEEECC
T ss_pred cc-hHHHHHHHHHhCCCEEEEEe
Confidence 53 23444555666445777665
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=91.23 E-value=0.052 Score=38.93 Aligned_cols=29 Identities=17% Similarity=0.368 Sum_probs=24.9
Q ss_pred cCCcchHHHHHHHHHCCC--eEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGH--QVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~--~V~~~~r~~~~ 31 (295)
|.|.+|.++++.|.+.|+ +|++.+|+++.
T Consensus 8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~ 38 (171)
T d2g5ca2 8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPES 38 (171)
T ss_dssp SCSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence 479999999999999986 78888887665
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=91.18 E-value=0.39 Score=31.90 Aligned_cols=65 Identities=12% Similarity=0.038 Sum_probs=50.6
Q ss_pred cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 6 ~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
+.+.+.++.|.+.|++++.+.-+|....... .-.+-+.......+.+.+.+++.+||.|+-..|-
T Consensus 25 y~~~~a~~aLk~~g~~~IliN~NPeTVstd~------------d~aD~lYfeplt~e~v~~Ii~~E~p~~ii~~~GG 89 (121)
T d1a9xa4 25 YCCVHASLALREDGYETIMVNCNPETVSTDY------------DTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGG 89 (121)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCTTSSTTST------------TSSSEEECCCCSHHHHHHHHHHHCCSEEECSSST
T ss_pred HHHHHHHHHHHhcCCeEEEEecChhhhhcCh------------hhcCceEEccCCHHHHHHHHHHhCCCEEEeehhh
Confidence 5678899999999999999999998854332 2234455556688999999999999999977553
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=91.03 E-value=0.29 Score=32.51 Aligned_cols=71 Identities=11% Similarity=0.108 Sum_probs=45.3
Q ss_pred CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccCCh
Q 022578 5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA 84 (295)
Q Consensus 5 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~~~ 84 (295)
+-.|+.+.+.|++.||+|+.+..+.+.. .+...+ .++.++-+ .+|.++-+. ..
T Consensus 14 ~k~g~~v~~~L~~~g~~V~pVnP~~~~i----------------~G~~~y-------~sl~~lp~--~~D~vvi~v--p~ 66 (116)
T d1y81a1 14 AKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLKCY-------RSVRELPK--DVDVIVFVV--PP 66 (116)
T ss_dssp TSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEECB-------SSGGGSCT--TCCEEEECS--CH
T ss_pred CCcHHHHHHHHHHCCCEEEEEccccccc----------------cCcccc-------ccchhccc--cceEEEEEe--CH
Confidence 6789999999999999999886543331 122222 22344445 789888764 45
Q ss_pred hcHHHHHHhCC--CCCcEEE
Q 022578 85 DEVEPILDALP--NLEQFIY 102 (295)
Q Consensus 85 ~~~~~ll~~~~--~~~~~i~ 102 (295)
+.+..+++.|. +.+.+++
T Consensus 67 ~~~~~~l~~~~~~g~k~v~~ 86 (116)
T d1y81a1 67 KVGLQVAKEAVEAGFKKLWF 86 (116)
T ss_dssp HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhcCCceEEe
Confidence 56666666554 7665443
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=91.03 E-value=0.73 Score=32.75 Aligned_cols=90 Identities=13% Similarity=0.001 Sum_probs=57.2
Q ss_pred CCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhhcCCCcEEEEcc
Q 022578 4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~~a 80 (295)
.|-+|...++.+...|. +|+++++++++... .....-..++...-.| .+.........++|+||.++
T Consensus 36 aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~----------a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~ 105 (174)
T d1p0fa2 36 LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPK----------AIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA 105 (174)
T ss_dssp CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH----------HHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCchhHHHHHHHHHcCCceeeccCChHHHHHH----------HHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcC
Confidence 58899999999998885 78888888777321 1111223333222222 24444444445899999998
Q ss_pred cCChhcHHHHHHhCC-CCCcEEEee
Q 022578 81 GREADEVEPILDALP-NLEQFIYCS 104 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~-~~~~~i~~S 104 (295)
+. .......+..+. +..+++.+.
T Consensus 106 g~-~~~~~~~~~~~~~~~G~~v~vG 129 (174)
T d1p0fa2 106 GR-IETMMNALQSTYCGSGVTVVLG 129 (174)
T ss_dssp CC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred CC-chHHHHHHHHHHHhcCceEEEE
Confidence 84 455566666666 556777766
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.97 E-value=0.079 Score=38.63 Aligned_cols=84 Identities=13% Similarity=0.082 Sum_probs=54.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|..-|.+|++.++........ ..+++ ..+++++++ .+|+|+.+...
T Consensus 51 G~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~------------~~~~~--------~~~l~ell~--~sDiv~~~~Pl 108 (184)
T d1ygya1 51 GLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA------------QLGIE--------LLSLDDLLA--RADFISVHLPK 108 (184)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH------------HHTCE--------ECCHHHHHH--HCSEEEECCCC
T ss_pred cccchhHHHHHHhhhccceEEeecCCCChhHHh------------hcCce--------eccHHHHHh--hCCEEEEcCCC
Confidence 689999999999998899999988776542110 01121 124667888 89999877655
Q ss_pred Chh----cHHHHHHhCCCCCcEEEeecccc
Q 022578 83 EAD----EVEPILDALPNLEQFIYCSSAGV 108 (295)
Q Consensus 83 ~~~----~~~~ll~~~~~~~~~i~~Ss~~v 108 (295)
+.+ -....+..++....+|.+|=..+
T Consensus 109 t~~T~~lin~~~l~~mk~~a~lIN~sRG~i 138 (184)
T d1ygya1 109 TPETAGLIDKEALAKTKPGVIIVNAARGGL 138 (184)
T ss_dssp STTTTTCBCHHHHTTSCTTEEEEECSCTTS
T ss_pred CchhhhhhhHHHHhhhCCCceEEEecchhh
Confidence 432 13445555665557777775444
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=90.97 E-value=0.063 Score=37.94 Aligned_cols=92 Identities=12% Similarity=0.013 Sum_probs=48.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCC-CCchhhhhccCCeEEEEecCCChHHHHHhhhc-----CCCcEE
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVV 76 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~v 76 (295)
|.|.+|..+++.|++.|+.| ...|.+++....... .......+.....+++...+.+.+.+...... ..-.++
T Consensus 7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~~~~~i 85 (156)
T d2cvza2 7 GLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLREGTYW 85 (156)
T ss_dssp CCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEE
T ss_pred eHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccccccccc
Confidence 57999999999999998866 467776653211100 00000001111223333333444444333221 245566
Q ss_pred EEcccCChhcHHHHHHhCC
Q 022578 77 YDINGREADEVEPILDALP 95 (295)
Q Consensus 77 i~~a~~~~~~~~~ll~~~~ 95 (295)
+++....+...+.+.+.++
T Consensus 86 id~sT~~p~~~~~~~~~~~ 104 (156)
T d2cvza2 86 VDATSGEPEASRRLAERLR 104 (156)
T ss_dssp EECSCCCHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHH
Confidence 6777667777777766665
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=90.79 E-value=0.47 Score=33.60 Aligned_cols=89 Identities=11% Similarity=0.152 Sum_probs=65.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|.|..|..-++.+...|.+|++++.+.+... ++.+. ..+++.. ..+.+.+.+.+. +.|+||.++-
T Consensus 39 GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~---------~l~~~~~~~~~~~---~~~~~~l~~~~~--~aDivI~aal 104 (168)
T d1pjca1 39 GGGVVGTEAAKMAVGLGAQVQIFDINVERLS---------YLETLFGSRVELL---YSNSAEIETAVA--EADLLIGAVL 104 (168)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------HHHHHHGGGSEEE---ECCHHHHHHHHH--TCSEEEECCC
T ss_pred CCChHHHHHHHHHhhCCCEEEEEeCcHHHHH---------HHHHhhcccceee---hhhhhhHHHhhc--cCcEEEEeee
Confidence 4688999999999999999999999877732 11111 2334443 347788999999 9999999976
Q ss_pred CC-----hhcHHHHHHhCCCCCcEEEeec
Q 022578 82 RE-----ADEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 82 ~~-----~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
.. .--++.+++.++...-+|=+|.
T Consensus 105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvai 133 (168)
T d1pjca1 105 VPGRRAPILVPASLVEQMRTGSVIVDVAV 133 (168)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred cCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence 52 2348889999995556776664
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=90.74 E-value=0.44 Score=34.11 Aligned_cols=92 Identities=11% Similarity=0.104 Sum_probs=58.5
Q ss_pred cCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEe-cCC-ChHHHHHhhhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-DRK-DYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~-~~~~~~~~~~~~~~d~vi~~ 79 (295)
|.|-+|...++.+...| .+|+++++++++.... .+ ..-..++.. |-. ..+.+.+.....++|++|.+
T Consensus 37 G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A---------k~-~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~ 106 (176)
T d1d1ta2 37 GLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA---------MA-VGATECISPKDSTKPISEVLSEMTGNNVGYTFEV 106 (176)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---------HH-HTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEEC
T ss_pred CCCchhHHHHHHHHHcCCceEEEecCcHHHHHHH---------Hh-cCCcEEECccccchHHHHHHHHhccccceEEEEe
Confidence 46999999999999998 5899999998883211 11 112223321 221 23445555655689999999
Q ss_pred ccCChhcHHHHHHhCC-CCCcEEEeec
Q 022578 80 NGREADEVEPILDALP-NLEQFIYCSS 105 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~i~~Ss 105 (295)
.+.. ......+..+. +..++|.++.
T Consensus 107 ~g~~-~~~~~a~~~~~~~~G~~v~vG~ 132 (176)
T d1d1ta2 107 IGHL-ETMIDALASCHMNYGTSVVVGV 132 (176)
T ss_dssp SCCH-HHHHHHHTTSCTTTCEEEECSC
T ss_pred CCch-HHHHHHHHHhhcCCeEEEEEEc
Confidence 8753 33444455554 6568888764
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.72 E-value=0.25 Score=33.28 Aligned_cols=64 Identities=17% Similarity=0.168 Sum_probs=50.5
Q ss_pred cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 6 ~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
+.+.+.++.|.+.|++++.+.-+|....... .-.+-+.......+.+.+.+++.++|.|+-..|
T Consensus 28 y~~~~a~~alke~g~~~iliN~NP~TVstd~------------d~aD~lYfePlt~e~v~~Ii~~E~pd~il~~~G 91 (127)
T d1a9xa3 28 YSGAQACKALREEGYRVINVNSNPATIMTDP------------EMADATYIEPIHWEVVRKIIEKERPDAVLPTMG 91 (127)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSCTTCGGGCG------------GGSSEEECSCCCHHHHHHHHHHHCCSEEECSSS
T ss_pred HHHHHHHHHHHHcCCeEEEecCchHhhhcCh------------hhcceeeeecCCHHHHHHHHHHhCcCCeEEEee
Confidence 5677889999999999999999998854332 223445566678899999999999999997655
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=90.70 E-value=0.072 Score=37.62 Aligned_cols=19 Identities=21% Similarity=0.135 Sum_probs=17.2
Q ss_pred CCcCCcchHHHHHHHHHCC
Q 022578 1 MGGTRFIGVFLSRLLVKEG 19 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g 19 (295)
+||+|++|++++..|...+
T Consensus 10 iGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 10 TGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp SSTTSHHHHHHHHHHHTTT
T ss_pred ECCCCHHHHHHHHHHHhcc
Confidence 6999999999999999864
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=90.48 E-value=1.3 Score=31.39 Aligned_cols=91 Identities=15% Similarity=0.096 Sum_probs=57.7
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCC--ChHHHHHhhhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~~~~~~~~~~~d~vi~~ 79 (295)
|.|.+|...++.+...|. +|++.++++.+.. +.+...-.+++...-. ....+.+.....++|++|.+
T Consensus 36 G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~----------~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~ 105 (174)
T d1e3ia2 36 GLGCVGLSAIIGCKIAGASRIIAIDINGEKFP----------KAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 105 (174)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH----------HHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCChHHHHHHHHHHHhCCceeeeeccchHHHH----------HHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence 469999999999999997 6777777766621 1111222333332221 23444445555699999999
Q ss_pred ccCChhcHHHHHHhCC-CCCcEEEee
Q 022578 80 NGREADEVEPILDALP-NLEQFIYCS 104 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~-~~~~~i~~S 104 (295)
+|. .......++.++ +..+++.++
T Consensus 106 ~G~-~~~~~~a~~~~~~g~G~~v~vG 130 (174)
T d1e3ia2 106 AGT-AQTLKAAVDCTVLGWGSCTVVG 130 (174)
T ss_dssp SCC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred ccc-chHHHHHHHHhhcCCeEEEecC
Confidence 985 344556667776 456888776
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=90.41 E-value=0.14 Score=34.38 Aligned_cols=29 Identities=28% Similarity=0.512 Sum_probs=26.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|++|..++..|.+.|.+|+++.|.+.-
T Consensus 37 GgG~iG~E~A~~l~~~g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 37 GSGYIGIEAAEAFAKAGKKVTVIDILDRP 65 (123)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CChHHHHHHHHHhhccceEEEEEEecCcc
Confidence 68999999999999999999999988655
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.18 E-value=0.073 Score=39.44 Aligned_cols=29 Identities=21% Similarity=0.354 Sum_probs=26.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|++|..++..|+++|++|++++.++..
T Consensus 7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~ 35 (202)
T d1mv8a2 7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK 35 (202)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence 68999999999999999999999987655
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=89.88 E-value=0.063 Score=37.28 Aligned_cols=70 Identities=23% Similarity=0.250 Sum_probs=42.5
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|+ |.+|..++..|+.++ .++.++++++........ +...-...........+| . +.++ +.|+|+-
T Consensus 6 IGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~--Dl~~~~~~~~~~~~~~~~---~----~~~~--~adivvi 73 (140)
T d1a5za1 6 VGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDAL--DLIHGTPFTRRANIYAGD---Y----ADLK--GSDVVIV 73 (140)
T ss_dssp ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH--HHHHHGGGSCCCEEEECC---G----GGGT--TCSEEEE
T ss_pred ECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhc--cccccccccccccccCCc---H----HHhc--CCCEEEE
Confidence 365 999999999998876 488888887655321100 000001122344444433 2 3456 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 74 tag~ 77 (140)
T d1a5za1 74 AAGV 77 (140)
T ss_dssp CCCC
T ss_pred eccc
Confidence 9886
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=89.85 E-value=0.4 Score=32.91 Aligned_cols=74 Identities=9% Similarity=-0.002 Sum_probs=47.9
Q ss_pred CcC---CcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 2 Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+| +-.|..+++.|.+.||+|+.+....... .+...+ .++.++-. .+|.|+-
T Consensus 26 GaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i----------------~G~~~~-------~sl~dlp~--~iD~v~i 80 (139)
T d2d59a1 26 GASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV----------------LGRKCY-------PSVLDIPD--KIEVVDL 80 (139)
T ss_dssp TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEECB-------SSGGGCSS--CCSEEEE
T ss_pred eecCCCCCchHHHHHHHHHCCCEEEEECCccccc----------------CCCccc-------ccccccCc--cceEEEE
Confidence 555 6789999999999999999887554331 122221 12334444 7899887
Q ss_pred cccCChhcHHHHHHhCC--CCCcEEE
Q 022578 79 INGREADEVEPILDALP--NLEQFIY 102 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~--~~~~~i~ 102 (295)
+.. +.....+++.+. +.+.+++
T Consensus 81 ~vp--~~~~~~~~~e~~~~g~k~v~~ 104 (139)
T d2d59a1 81 FVK--PKLTMEYVEQAIKKGAKVVWF 104 (139)
T ss_dssp CSC--HHHHHHHHHHHHHHTCSEEEE
T ss_pred EeC--HHHHHHHHHHHHHhCCCEEEE
Confidence 753 556666776665 7755444
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=89.83 E-value=0.096 Score=36.37 Aligned_cols=30 Identities=17% Similarity=0.316 Sum_probs=24.3
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAP 31 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 31 (295)
+| +|.+|..++..|+.++. ++.+++..++.
T Consensus 7 IG-aG~VG~~~A~~l~~~~l~dl~l~D~~~~~ 37 (142)
T d1uxja1 7 IG-AGFVGSTTAHWLAAKELGDIVLLDIVEGV 37 (142)
T ss_dssp EC-CSHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred EC-CCHHHHHHHHHHHhCCcceEEEEeecccc
Confidence 36 49999999999988774 88888877765
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.67 E-value=0.14 Score=36.28 Aligned_cols=87 Identities=9% Similarity=0.066 Sum_probs=52.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi~~ 79 (295)
|.|.+|...++.+...|.+|+++++++.+.... ++ ..-.+++ |..+. +.+.+... +.+.+|.+
T Consensus 35 GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a---------~~-~Ga~~~i--~~~~~~~~~~~~~~~~--g~~~~i~~ 100 (166)
T d1llua2 35 GIGGLGHVAVQYARAMGLHVAAIDIDDAKLELA---------RK-LGASLTV--NARQEDPVEAIQRDIG--GAHGVLVT 100 (166)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HH-TTCSEEE--ETTTSCHHHHHHHHHS--SEEEEEEC
T ss_pred eccccHHHHHHHHHHcCCccceecchhhHHHhh---------hc-cCccccc--cccchhHHHHHHHhhc--CCcccccc
Confidence 459999999988888899999999887763211 11 1122333 33333 33333333 66777776
Q ss_pred ccCChhcHHHHHHhCCCCCcEEEee
Q 022578 80 NGREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 80 a~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
++. .......++.++...+++.++
T Consensus 101 ~~~-~~~~~~~~~~l~~~G~iv~~G 124 (166)
T d1llua2 101 AVS-NSAFGQAIGMARRGGTIALVG 124 (166)
T ss_dssp CSC-HHHHHHHHTTEEEEEEEEECC
T ss_pred ccc-chHHHHHHHHhcCCcEEEEEE
Confidence 654 334555566666445777664
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=89.50 E-value=0.041 Score=39.22 Aligned_cols=71 Identities=13% Similarity=0.132 Sum_probs=41.6
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+| .|.+|+.++..|..+|. ++.+++++++..........+ -.........+.. .+.+ .++ ++|+|+.
T Consensus 26 IG-aG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h--~~~~~~~~~~~~~--~d~~----~~~--~adiVVi 94 (160)
T d1i0za1 26 VG-VGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH--GSLFLQTPKIVAD--KDYS----VTA--NSKIVVV 94 (160)
T ss_dssp EC-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH--TGGGCCCSEEEEC--SSGG----GGT--TCSEEEE
T ss_pred EC-CCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhc--cccccCCCeEEec--cchh----hcc--cccEEEE
Confidence 36 59999999999999985 888888876553111100000 0111122222222 2333 355 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 95 tAg~ 98 (160)
T d1i0za1 95 TAGV 98 (160)
T ss_dssp CCSC
T ss_pred ecCC
Confidence 9986
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=89.26 E-value=1.4 Score=31.15 Aligned_cols=89 Identities=18% Similarity=0.162 Sum_probs=54.0
Q ss_pred CcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEe--cCCC-hHHHHHhhhcCCCcEEE
Q 022578 2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG--DRKD-YDFVKSSLSAKGFDVVY 77 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--D~~~-~~~~~~~~~~~~~d~vi 77 (295)
|+ |-+|...+..+...| .+|+++++++++.... .+ .+.+.+.. +-.+ .+...+.....++|++|
T Consensus 36 Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a---------~~--~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vi 103 (176)
T d2jhfa2 36 GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA---------KE--VGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 103 (176)
T ss_dssp CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---------HH--TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH---------HH--hCCeeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence 55 558999999999987 5899988888873211 11 22332222 2222 33444455446899999
Q ss_pred EcccCChhcHHHHHHhCC-CCCcEEEe
Q 022578 78 DINGREADEVEPILDALP-NLEQFIYC 103 (295)
Q Consensus 78 ~~a~~~~~~~~~ll~~~~-~~~~~i~~ 103 (295)
.+.|.. ...+..++.+. +...++..
T Consensus 104 d~~G~~-~~~~~a~~~~~~~~g~~~~~ 129 (176)
T d2jhfa2 104 EVIGRL-DTMVTALSCCQEAYGVSVIV 129 (176)
T ss_dssp ECSCCH-HHHHHHHHHBCTTTCEEEEC
T ss_pred ecCCch-hHHHHHHHHHhcCCcceEEe
Confidence 998853 34455666776 44444443
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.23 E-value=0.17 Score=33.60 Aligned_cols=29 Identities=24% Similarity=0.387 Sum_probs=26.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|++|..++..|.+.|.+|+++.|.+.-
T Consensus 29 GgG~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 29 GGGYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCCccceeeeeeecccccEEEEEEeccee
Confidence 58999999999999999999999988765
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=89.10 E-value=0.37 Score=35.48 Aligned_cols=89 Identities=11% Similarity=0.018 Sum_probs=48.7
Q ss_pred CCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEE-ecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-GDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
++..|..+++.|++.|++|.++...+++........ .....+...++.++. .++.+++ +.+.+++.++|++|.+...
T Consensus 8 ~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~-~~~~~a~~~~i~~~~~~~~~~~~-~~~~i~~~~~Dlii~~g~~ 85 (203)
T d2blna2 8 YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYG-SVARLAAERGIPVYAPDNVNHPL-WVERIAQLSPDVIFSFYYR 85 (203)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCCC------CCC-CHHHHHHHHTCCEECCSCCCSHH-HHHHHHHTCCSEEEEESCC
T ss_pred cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccC-HHHHHHHHcCCcceecccccchh-hhhhhhhhcccceeeeecc
Confidence 455799999999999999987665443321111100 001111123566554 3454444 5556677899998877532
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
.--...+++..+
T Consensus 86 -~ii~~~il~~~~ 97 (203)
T d2blna2 86 -HLIYDEILQLAP 97 (203)
T ss_dssp -SCCCHHHHTTCT
T ss_pred -cchhcccchhhH
Confidence 223445555544
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=89.04 E-value=0.16 Score=35.78 Aligned_cols=72 Identities=17% Similarity=0.126 Sum_probs=40.8
Q ss_pred CCcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccC-CeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+|+ |.+|..++..|...+. ++.+++.++......... ......... ....... ...+..++ +.|+|+.
T Consensus 13 IGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~D--l~~~~~~~~~~~~~~~~-----~~~~~~~~--~adiVvi 82 (154)
T d1pzga1 13 IGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALD--LSHVTSVVDTNVSVRAE-----YSYEAALT--GADCVIV 82 (154)
T ss_dssp ECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHH--HHHHHHHTTCCCCEEEE-----CSHHHHHT--TCSEEEE
T ss_pred ECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHH--HhhhccccCCeeEEecc-----Cchhhhhc--CCCeEEE
Confidence 365 9999999988888774 888888777552211000 000011111 1112211 12345667 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
++|.
T Consensus 83 tag~ 86 (154)
T d1pzga1 83 TAGL 86 (154)
T ss_dssp CCSC
T ss_pred eccc
Confidence 9875
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=88.73 E-value=0.21 Score=35.00 Aligned_cols=56 Identities=20% Similarity=0.164 Sum_probs=42.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~ 79 (295)
+.||+|..++..|.+.|.+|+++.+.+.-.. . .|-.....+.+.+.+.++++..+.
T Consensus 48 ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~----------------~-----~~~~~~~~~~~~l~~~GV~i~~~~ 103 (156)
T d1djqa2 48 DTYFMAPSLAEKLATAGHEVTIVSGVHLANY----------------M-----HFTLEYPNMMRRLHELHVEELGDH 103 (156)
T ss_dssp CCSSHHHHHHHHHHHTTCEEEEEESSCTTTH----------------H-----HHTTCHHHHHHHHHHTTCEEEETE
T ss_pred CCChHHHHHHHHHHHcCCeEEEEecCCcccc----------------c-----cchhHHHHHHHHHhhccceEEecc
Confidence 5799999999999999999999998764311 1 144456677777877777777654
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=88.67 E-value=0.0078 Score=42.74 Aligned_cols=81 Identities=16% Similarity=0.131 Sum_probs=44.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|+|.+|+++++.|.+.++.+.+..|++++.... .+... . ...+ ..++.+ ..|+||-+..
T Consensus 6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l---------~~~~~-~-----~~~~---~~~~~~--~~DiVil~v~- 64 (153)
T d2i76a2 6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNL---------AEVYG-G-----KAAT---LEKHPE--LNGVVFVIVP- 64 (153)
T ss_dssp SCCHHHHHHHHTTC----CCCEECSSHHHHHHH---------HHHTC-C-----CCCS---SCCCCC-----CEEECSC-
T ss_pred eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcch---------hhccc-c-----cccc---hhhhhc--cCcEEEEecc-
Confidence 689999999998866444446778887763221 11111 1 1111 224555 8899998874
Q ss_pred ChhcHHHHHHhCC-CCCcEEEeec
Q 022578 83 EADEVEPILDALP-NLEQFIYCSS 105 (295)
Q Consensus 83 ~~~~~~~ll~~~~-~~~~~i~~Ss 105 (295)
......+++.+. +.+-+|++|+
T Consensus 65 -d~~i~~v~~~l~~~~~ivi~~s~ 87 (153)
T d2i76a2 65 -DRYIKTVANHLNLGDAVLVHCSG 87 (153)
T ss_dssp -TTTHHHHHTTTCCSSCCEEECCS
T ss_pred -chhhhHHHhhhcccceeeeeccc
Confidence 346666777776 4555666654
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=88.55 E-value=0.21 Score=35.36 Aligned_cols=88 Identities=13% Similarity=0.100 Sum_probs=55.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCC-Ch-HHHHHhhhcCCCcEEEEcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DY-DFVKSSLSAKGFDVVYDIN 80 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~-~~~~~~~~~~~~d~vi~~a 80 (295)
|+|-+|...++.+...|.+|+++++++++... .++ -+.+.+...-. +. +.+.+... +.+.+|.++
T Consensus 35 G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~---------~k~--~Ga~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~ 101 (168)
T d1rjwa2 35 GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLEL---------AKE--LGADLVVNPLKEDAAKFMKEKVG--GVHAAVVTA 101 (168)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH---------HHH--TTCSEEECTTTSCHHHHHHHHHS--SEEEEEESS
T ss_pred ecccchhhhhHHHhcCCCeEeccCCCHHHhhh---------hhh--cCcceecccccchhhhhcccccC--CCceEEeec
Confidence 56899999988888889999999988777321 111 24444433222 22 33444444 677777666
Q ss_pred cCChhcHHHHHHhCCCCCcEEEee
Q 022578 81 GREADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~i~~S 104 (295)
+ ........+++++...+++.++
T Consensus 102 ~-~~~~~~~a~~~l~~~G~i~~~g 124 (168)
T d1rjwa2 102 V-SKPAFQSAYNSIRRGGACVLVG 124 (168)
T ss_dssp C-CHHHHHHHHHHEEEEEEEEECC
T ss_pred C-CHHHHHHHHHHhccCCceEecc
Confidence 5 3556777777777444666654
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=88.45 E-value=0.075 Score=37.17 Aligned_cols=67 Identities=18% Similarity=0.274 Sum_probs=41.6
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhh---hcc-CCeEEEEecCCChHHHHHhhhcCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFA---EFS-SKILHLKGDRKDYDFVKSSLSAKGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~-~~v~~~~~D~~~~~~~~~~~~~~~~d 74 (295)
+| .|.+|+.++..|+.+| .++.+++++........ ..+. ... ....+... +.+ .++ +.|
T Consensus 7 IG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~-----~Dl~~a~~~~~~~~~~~~~---d~~----~l~--~ad 71 (146)
T d1hyha1 7 IG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQ-----IDFQDAMANLEAHGNIVIN---DWA----ALA--DAD 71 (146)
T ss_dssp EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHH-----HHHHHHGGGSSSCCEEEES---CGG----GGT--TCS
T ss_pred EC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHH-----HhhhccccccCCccceecc---CHH----Hhc--ccc
Confidence 46 5999999999999887 48888887765522110 0111 111 23334333 333 345 999
Q ss_pred EEEEcccC
Q 022578 75 VVYDINGR 82 (295)
Q Consensus 75 ~vi~~a~~ 82 (295)
+||-++|.
T Consensus 72 iVVitaG~ 79 (146)
T d1hyha1 72 VVISTLGN 79 (146)
T ss_dssp EEEECCSC
T ss_pred EEEEeccc
Confidence 99999885
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.40 E-value=0.49 Score=33.37 Aligned_cols=73 Identities=8% Similarity=-0.023 Sum_probs=54.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.||+.+++.|...|.+|++...+|-.. +++...+.+.. .+++++. ..|+||-+.|.
T Consensus 31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~a-----------l~A~~dG~~v~--------~~~~a~~--~adivvtaTGn 89 (163)
T d1li4a1 31 GYGDVGKGCAQALRGFGARVIITEIDPINA-----------LQAAMEGYEVT--------TMDEACQ--EGNIFVTTTGC 89 (163)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHH-----------HHHHHTTCEEC--------CHHHHTT--TCSEEEECSSC
T ss_pred ccccccHHHHHHHHhCCCeeEeeecccchh-----------HHhhcCceEee--------ehhhhhh--hccEEEecCCC
Confidence 689999999999999999999999988652 23334555444 3557777 89999999886
Q ss_pred ChhcHHHHHHhCCC
Q 022578 83 EADEVEPILDALPN 96 (295)
Q Consensus 83 ~~~~~~~ll~~~~~ 96 (295)
...-...-++.++.
T Consensus 90 ~~vI~~eh~~~MKd 103 (163)
T d1li4a1 90 IDIILGRHFEQMKD 103 (163)
T ss_dssp SCSBCHHHHTTCCT
T ss_pred ccchhHHHHHhccC
Confidence 44456666777773
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.26 E-value=0.19 Score=33.72 Aligned_cols=29 Identities=21% Similarity=0.297 Sum_probs=26.7
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|++|-.++..|.+.|.+|+++.|.+.-
T Consensus 30 G~G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 30 GGGIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence 58999999999999999999999998765
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=87.71 E-value=0.11 Score=36.65 Aligned_cols=18 Identities=17% Similarity=0.032 Sum_probs=16.2
Q ss_pred CCcCCcchHHHHHHHHHC
Q 022578 1 MGGTRFIGVFLSRLLVKE 18 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~ 18 (295)
+||+|.+|++++..|+..
T Consensus 9 iGA~G~VG~~la~~l~~~ 26 (154)
T d5mdha1 9 TGAAGQIAYSLLYSIGNG 26 (154)
T ss_dssp SSTTSHHHHTTHHHHHTT
T ss_pred ECCCCHHHHHHHHHHHHH
Confidence 699999999999999865
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=87.47 E-value=0.19 Score=33.64 Aligned_cols=29 Identities=38% Similarity=0.536 Sum_probs=26.1
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|++|-.++..|.+.|.+|+++.|.+.-
T Consensus 39 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~l 67 (122)
T d1xhca2 39 GGGFIGLELAGNLAEAGYHVKLIHRGAMF 67 (122)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CCcHHHHHHHHHhhcccceEEEEeccccc
Confidence 68999999999999999999999887544
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=86.93 E-value=0.26 Score=32.66 Aligned_cols=29 Identities=34% Similarity=0.516 Sum_probs=26.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|++|-.++..|.+.|.+|+++.|.+.-
T Consensus 28 GgG~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 28 GAGYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCChhhHHHHHHhhccccEEEEEeecchh
Confidence 68999999999999999999999998755
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=86.91 E-value=0.097 Score=36.37 Aligned_cols=68 Identities=16% Similarity=0.158 Sum_probs=41.2
Q ss_pred CCcCCcchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhh---hhcc-CCeEEEEecCCChHHHHHhhhcCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEF---AEFS-SKILHLKGDRKDYDFVKSSLSAKGFD 74 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~d 74 (295)
+| +|.+|..++..|+.+| .++.+++++++...... ..+ .... ....+...+ |. +.++ +.|
T Consensus 6 IG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~a-----lDl~~~~~~~~~~~~i~~~~--d~----~~~~--~ad 71 (142)
T d1ojua1 6 VG-AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEA-----MDLAHAAAGIDKYPKIVGGA--DY----SLLK--GSE 71 (142)
T ss_dssp EC-CSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHH-----HHHHHHHHTTTCCCEEEEES--CG----GGGT--TCS
T ss_pred EC-cCHHHHHHHHHHHhcCcCceEEEEecccchhhHHH-----HHHhhhccccCCCCccccCC--CH----HHhc--ccc
Confidence 36 4999999999998887 47888888765521100 001 0111 122333321 22 2555 999
Q ss_pred EEEEcccC
Q 022578 75 VVYDINGR 82 (295)
Q Consensus 75 ~vi~~a~~ 82 (295)
+||-.+|.
T Consensus 72 iVvitag~ 79 (142)
T d1ojua1 72 IIVVTAGL 79 (142)
T ss_dssp EEEECCCC
T ss_pred EEEEeccc
Confidence 99999885
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=86.85 E-value=0.38 Score=33.84 Aligned_cols=72 Identities=10% Similarity=-0.060 Sum_probs=54.8
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|=|++|+.++++|...|.+|+++..+|-.. +++.+.++++. .++++++ ..|++|-+.|.
T Consensus 30 GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~a-----------lqA~mdGf~v~--------~~~~a~~--~aDi~vTaTGn 88 (163)
T d1v8ba1 30 GYGDVGKGCASSMKGLGARVYITEIDPICA-----------IQAVMEGFNVV--------TLDEIVD--KGDFFITCTGN 88 (163)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSCHHHH-----------HHHHTTTCEEC--------CHHHHTT--TCSEEEECCSS
T ss_pred cccccchhHHHHHHhCCCEEEEEecCchhh-----------HHHHhcCCccC--------chhHccc--cCcEEEEcCCC
Confidence 348999999999999999999999998662 24445666654 3457888 89999999887
Q ss_pred ChhcHHHHHHhCC
Q 022578 83 EADEVEPILDALP 95 (295)
Q Consensus 83 ~~~~~~~ll~~~~ 95 (295)
-..-...-++.++
T Consensus 89 ~~vI~~~h~~~MK 101 (163)
T d1v8ba1 89 VDVIKLEHLLKMK 101 (163)
T ss_dssp SSSBCHHHHTTCC
T ss_pred CccccHHHHHHhh
Confidence 5445566667777
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=86.81 E-value=0.2 Score=34.98 Aligned_cols=71 Identities=25% Similarity=0.287 Sum_probs=40.5
Q ss_pred CCcCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhc-cCCeEEEEecCCChHHHHHhhhcCCCcEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~ 78 (295)
+| +|.+|+.++..|...+ .++.++++.++..........+ .... ..+..+...+ +. +.++ +.|+|+.
T Consensus 9 IG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~--~~~~~~~~~~v~~~~--~~----~~~~--~advvvi 77 (150)
T d1t2da1 9 VG-SGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH--TNVMAYSNCKVSGSN--TY----DDLA--GADVVIV 77 (150)
T ss_dssp EC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT--HHHHHTCCCCEEEEC--CG----GGGT--TCSEEEE
T ss_pred EC-CCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhh--hccccCCCcEEEecc--cc----cccC--CCcEEEE
Confidence 36 5999999998777776 4788888877653211000000 0011 1233333322 22 3445 9999999
Q ss_pred cccC
Q 022578 79 INGR 82 (295)
Q Consensus 79 ~a~~ 82 (295)
+++.
T Consensus 78 tag~ 81 (150)
T d1t2da1 78 TAGF 81 (150)
T ss_dssp CCSC
T ss_pred eccc
Confidence 9885
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=86.69 E-value=0.12 Score=36.25 Aligned_cols=80 Identities=15% Similarity=0.115 Sum_probs=49.7
Q ss_pred cCCcchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|+|.+|.++++.|++.| ++|++.+|++++.... .+. .++... .| .+ .+. ++|+||-+.-
T Consensus 7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l---------~~~-~~~~~~-~~---~~----~v~--~~Div~lavk 66 (152)
T d1yqga2 7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERL---------EKE-LGVETS-AT---LP----ELH--SDDVLILAVK 66 (152)
T ss_dssp CCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHH---------HHH-TCCEEE-SS---CC----CCC--TTSEEEECSC
T ss_pred cCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHh---------hhh-cccccc-cc---cc----ccc--ccceEEEecC
Confidence 57999999999999887 9999999998763211 111 234332 12 12 234 7899997753
Q ss_pred CChhcHHHHHHhCCCCCcEEEeec
Q 022578 82 READEVEPILDALPNLEQFIYCSS 105 (295)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~i~~Ss 105 (295)
+.....+++.++...++ .+|.
T Consensus 67 --P~~~~~v~~~l~~~~~~-viS~ 87 (152)
T d1yqga2 67 --PQDMEAACKNIRTNGAL-VLSV 87 (152)
T ss_dssp --HHHHHHHHTTCCCTTCE-EEEC
T ss_pred --HHHHHHhHHHHhhcccE-Eeec
Confidence 45566666665533333 3454
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.62 E-value=0.27 Score=32.93 Aligned_cols=26 Identities=23% Similarity=0.443 Sum_probs=24.2
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRG 28 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~ 28 (295)
|.|+||..++..|.+.|.+|+++.|+
T Consensus 27 GgG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 27 GASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCccHHHHHHHHhhcCCeEEEEEec
Confidence 58999999999999999999999875
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=86.59 E-value=0.24 Score=30.25 Aligned_cols=54 Identities=15% Similarity=0.076 Sum_probs=39.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCC--hHHHHHhhh
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLS 69 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~ 69 (295)
|+|.+|+-++....+.|++|++++.++...... ...+++..++.+ .+.+...++
T Consensus 8 G~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~-------------~a~dvIT~e~E~~~~~~l~~~la 63 (78)
T d3etja2 8 GNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVP-------------FQQSVITAEIERWPETALTRQLA 63 (78)
T ss_dssp BCSHHHHHHHHHHGGGTEEEEEECTTSCGGGSC-------------GGGSEEEESSSCCCCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCCEEEEEcCCCCCcccc-------------cccceEEEeeccCChHHHHHHHH
Confidence 689999999999999999999999887663322 234667776664 344545454
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=86.57 E-value=0.22 Score=32.87 Aligned_cols=29 Identities=28% Similarity=0.334 Sum_probs=26.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|++|-.++..|.+.|.+|+++.|.+.-
T Consensus 28 GgG~~G~E~A~~l~~~g~~Vtlve~~~~i 56 (115)
T d1lvla2 28 GGGYIGLELGIAYRKLGAQVSVVEARERI 56 (115)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCHHHHHHHHHHhhcccceEEEeeeccc
Confidence 68999999999999999999999888655
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=86.23 E-value=0.33 Score=32.26 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=26.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|+||-.++..|.+.|.+|+++.|...-
T Consensus 29 G~G~ig~E~A~~l~~~G~~Vtiv~~~~~l 57 (119)
T d3lada2 29 GAGVIGLELGSVWARLGAEVTVLEAMDKF 57 (119)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeeccc
Confidence 58999999999999999999999988665
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=86.01 E-value=0.27 Score=32.68 Aligned_cols=29 Identities=28% Similarity=0.497 Sum_probs=26.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus 29 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~i 57 (117)
T d1onfa2 29 GSGYIAVELINVIKRLGIDSYIFARGNRI 57 (117)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCchHHHHHHHHHHhccccceeeehhccc
Confidence 68999999999999999999999988654
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.66 E-value=0.32 Score=32.65 Aligned_cols=29 Identities=24% Similarity=0.424 Sum_probs=26.5
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|++|-.++..|.+.|.+|+++.|.+.-
T Consensus 29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~~~ 57 (125)
T d3grsa2 29 GAGYIAVEMAGILSALGSKTSLMIRHDKV 57 (125)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCccHHHHHHHHhcCCcEEEEEeecccc
Confidence 57999999999999999999999998654
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=85.47 E-value=0.58 Score=33.17 Aligned_cols=76 Identities=13% Similarity=0.173 Sum_probs=45.4
Q ss_pred cCCcchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEccc
Q 022578 3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING 81 (295)
Q Consensus 3 atG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~ 81 (295)
|+|++|+.+++.|.+. +.++.++......... ....... .+...... ++|+|+.+..
T Consensus 10 G~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---------------~~~~~~~-----~~~~~~~~--~~D~Vvi~tp 67 (170)
T d1f06a1 10 GYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---------------KTPVFDV-----ADVDKHAD--DVDVLFLCMG 67 (170)
T ss_dssp CCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---------------SSCEEEG-----GGGGGTTT--TCSEEEECSC
T ss_pred CChHHHHHHHHHHHhCCCcEEEEEEeccccccc---------------ccccccc-----hhhhhhcc--ccceEEEeCC
Confidence 5899999999999876 6777776544433111 1112211 12334455 8999998876
Q ss_pred CChhcHHHHHHhCCCCCcEE
Q 022578 82 READEVEPILDALPNLEQFI 101 (295)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~i 101 (295)
... ....+..+++..+++|
T Consensus 68 ~~~-h~~~a~~aL~aG~~vv 86 (170)
T d1f06a1 68 SAT-DIPEQAPKFAQFACTV 86 (170)
T ss_dssp TTT-HHHHHHHHHTTTSEEE
T ss_pred Ccc-cHHHHHHHHHCCCcEE
Confidence 543 3445555566444655
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=85.18 E-value=0.29 Score=32.81 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=27.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|++|-.++..|.+.|.+|+++.|.+.-.
T Consensus 32 G~G~iglE~A~~~~~~G~~Vtvi~~~~~~l 61 (123)
T d1dxla2 32 GAGYIGLEMGSVWGRIGSEVTVVEFASEIV 61 (123)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred ccchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence 579999999999999999999999987763
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=85.17 E-value=0.21 Score=36.86 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=45.0
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCChHHHHHhhhcCCCcEEEEcccC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR 82 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~a~~ 82 (295)
|.|.+|+++++.|.+.|.+|++.+.++...... . ..+.+.+ +.+ +++. .+||+++-||..
T Consensus 34 G~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~---------~--~~g~~~~-----~~~---~~~~-~~~DI~iPcA~~ 93 (201)
T d1c1da1 34 GLGAVGGSLASLAAEAGAQLLVADTDTERVAHA---------V--ALGHTAV-----ALE---DVLS-TPCDVFAPCAMG 93 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH---------H--HTTCEEC-----CGG---GGGG-CCCSEEEECSCS
T ss_pred CCCHHHHHHHHHHHHCCCEEEEecchHHHHHHH---------H--hhccccc-----Ccc---cccc-ccceeeeccccc
Confidence 579999999999999999999887665542110 0 1223222 222 3444 589999999876
Q ss_pred ChhcHHHHHHhC
Q 022578 83 EADEVEPILDAL 94 (295)
Q Consensus 83 ~~~~~~~ll~~~ 94 (295)
+.. +...++.+
T Consensus 94 ~~I-~~~~a~~i 104 (201)
T d1c1da1 94 GVI-TTEVARTL 104 (201)
T ss_dssp CCB-CHHHHHHC
T ss_pred ccc-cHHHHhhh
Confidence 543 33344444
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=84.88 E-value=0.27 Score=35.07 Aligned_cols=30 Identities=17% Similarity=-0.013 Sum_probs=26.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|-.+++++..|.+.|.+|+++.|+.++.
T Consensus 25 GaGGaarai~~al~~~g~~i~I~nRt~~ka 54 (170)
T d1nyta1 25 GAGGASRGVLLPLLSLDCAVTITNRTVSRA 54 (170)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CCcHHHHHHHHHhcccceEEEeccchHHHH
Confidence 468889999999999999999999998773
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=84.72 E-value=0.37 Score=32.74 Aligned_cols=30 Identities=23% Similarity=0.409 Sum_probs=27.3
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCcc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI 32 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 32 (295)
|+|++|-.++..|.+.|.+|+++.+.+.-.
T Consensus 42 GgG~iG~E~A~~l~~~g~~Vtvie~~~~~l 71 (133)
T d1q1ra2 42 GGGYIGLEVAATAIKANMHVTLLDTAARVL 71 (133)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCchHHHHHHHHHHhhCcceeeeeeccccc
Confidence 589999999999999999999999987653
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.25 E-value=0.083 Score=37.49 Aligned_cols=30 Identities=13% Similarity=0.247 Sum_probs=24.8
Q ss_pred CCcCCcchHHHHHHHHHCCC--eEEEEecCCCc
Q 022578 1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP 31 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~ 31 (295)
+| .|.+|..++..|..+|. ++.++++++..
T Consensus 25 IG-aG~VG~~~A~~l~~~~l~~elvL~D~~~~~ 56 (159)
T d2ldxa1 25 VG-VGDVGMACAISILLKGLADELALVDADTDK 56 (159)
T ss_dssp EC-CSHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred EC-CCHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence 36 59999999999999874 89998887654
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=84.11 E-value=0.86 Score=31.60 Aligned_cols=84 Identities=20% Similarity=0.181 Sum_probs=52.1
Q ss_pred CCcCCcchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhccC-----------------------CeEEEE
Q 022578 1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-----------------------KILHLK 55 (295)
Q Consensus 1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----------------------~v~~~~ 55 (295)
+|+||-||.....-+.+. .++|.+++-...... . .....++.+ ++++..
T Consensus 7 lGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~-L-----~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~ 80 (151)
T d1q0qa2 7 LGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTR-M-----VEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS 80 (151)
T ss_dssp ETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHH-H-----HHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred EcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHH-H-----HHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence 599999999999988876 479999886544310 0 001111112 233332
Q ss_pred ecCCChHHHHHhhhcCCCcEEEEcccCChhcHHHHHHhCC
Q 022578 56 GDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP 95 (295)
Q Consensus 56 ~D~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~ll~~~~ 95 (295)
..+.+.++....++|.|++... ...+....+.+++
T Consensus 81 ----g~~~l~~~~~~~~~D~vi~AI~-G~aGL~~t~~aik 115 (151)
T d1q0qa2 81 ----GQQAACDMAALEDVDQVMAAIV-GAAGLLPTLAAIR 115 (151)
T ss_dssp ----SHHHHHHHHTCTTCCEEEECCS-SGGGHHHHHHHHH
T ss_pred ----ChHHHHHHhcCCCCCEEEEecC-cccHHHHHHHHHh
Confidence 3356666666567899998753 2457777777766
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=84.05 E-value=0.57 Score=33.15 Aligned_cols=29 Identities=10% Similarity=0.263 Sum_probs=25.7
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 31 (295)
|+|..+++++..|.+.|. +|+++.|+.++
T Consensus 24 GaGGaarai~~aL~~~g~~~I~I~nR~~~k 53 (167)
T d1npya1 24 GSGGMAKAVVAAFKNSGFEKLKIYARNVKT 53 (167)
T ss_dssp CSSTTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence 468999999999999996 89999998776
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=84.02 E-value=4.9 Score=27.91 Aligned_cols=90 Identities=14% Similarity=0.062 Sum_probs=49.2
Q ss_pred CcCCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecC--CChHHHHHhhhcCCCcEEEE
Q 022578 2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR--KDYDFVKSSLSAKGFDVVYD 78 (295)
Q Consensus 2 GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~~~~~~~~~~~d~vi~ 78 (295)
|+ |.+|...++.+...|. .|++.++++++.. . .....-.+++..+- .+.....+.....++|+||.
T Consensus 36 Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~---------ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid 104 (176)
T d2fzwa2 36 GL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-R---------AKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFE 104 (176)
T ss_dssp CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-H---------HHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred cc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-H---------HHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeee
Confidence 54 6689999888888885 5666666665521 1 11112223332211 12233333444458999999
Q ss_pred cccCChhcHHHHHHhCCCCCcEEEe
Q 022578 79 INGREADEVEPILDALPNLEQFIYC 103 (295)
Q Consensus 79 ~a~~~~~~~~~ll~~~~~~~~~i~~ 103 (295)
+.|. ..........++....++++
T Consensus 105 ~~G~-~~~~~~~~~~~~~g~~~~~v 128 (176)
T d2fzwa2 105 CIGN-VKVMRAALEACHKGWGVSVV 128 (176)
T ss_dssp CSCC-HHHHHHHHHTBCTTTCEEEE
T ss_pred cCCC-HHHHHHHHHhhcCCceeEEE
Confidence 9874 33445555556533344443
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=83.79 E-value=0.9 Score=32.49 Aligned_cols=27 Identities=15% Similarity=0.242 Sum_probs=21.9
Q ss_pred cCCcchHHHHHHHHHC-CCeEEEEecCC
Q 022578 3 GTRFIGVFLSRLLVKE-GHQVTLFTRGK 29 (295)
Q Consensus 3 atG~iG~~l~~~L~~~-g~~V~~~~r~~ 29 (295)
|.|.||+.+++.|.++ +.+|.++....
T Consensus 8 GfGRIGR~v~Ral~~~~dievVaInd~~ 35 (178)
T d1b7go1 8 GYGTIGKRVADAIIKQPDMKLVGVAKTS 35 (178)
T ss_dssp CCSHHHHHHHHHHHTCTTEEEEEEECSS
T ss_pred CCCHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 5799999999999987 47888876443
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=83.09 E-value=3.5 Score=30.71 Aligned_cols=105 Identities=12% Similarity=0.099 Sum_probs=63.6
Q ss_pred cCCcchHHHHHHHHHCCC-eEEEEecCCCcc---ccCCC--C---------CCchhhhhccCCeEEEEecCC-ChHHHHH
Q 022578 3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP--G---------ESDQEFAEFSSKILHLKGDRK-DYDFVKS 66 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~--~---------~~~~~~~~~~~~v~~~~~D~~-~~~~~~~ 66 (295)
|.|-+|++++..|...|. ++++++.+.-.. ..+.. . .....+....+.+++...+.. +.+....
T Consensus 37 G~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~~~~~~~~ 116 (247)
T d1jw9b_ 37 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAA 116 (247)
T ss_dssp CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhhhhccccc
Confidence 578899999999999997 788877665332 11111 0 011223445566666665543 4556667
Q ss_pred hhhcCCCcEEEEcccCChhcHHHHHHhCC-CCCcEEEeecccccc
Q 022578 67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL 110 (295)
Q Consensus 67 ~~~~~~~d~vi~~a~~~~~~~~~ll~~~~-~~~~~i~~Ss~~v~~ 110 (295)
.+. ..|+|+.+... ......+-++|. ....+|+.+..+.+|
T Consensus 117 ~~~--~~divid~~d~-~~~~~~in~~~~~~~ip~i~g~~~~~~g 158 (247)
T d1jw9b_ 117 LIA--EHDLVLDCTDN-VAVRNQLNAGCFAAKVPLVSGAAIRMEG 158 (247)
T ss_dssp HHH--TSSEEEECCSS-HHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred ccc--ccceeeeccch-hhhhhhHHHHHHHhCCCccccccccccc
Confidence 777 89999988643 333333444454 444777766555444
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=83.05 E-value=0.4 Score=32.18 Aligned_cols=29 Identities=14% Similarity=0.233 Sum_probs=26.6
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|+|+||-.++..|.+.|.+|+++.|.+.-
T Consensus 33 GgG~IG~E~A~~~~~~G~~Vtive~~~~i 61 (125)
T d1ojta2 33 GGGIIGLEMGTVYSTLGSRLDVVEMMDGL 61 (125)
T ss_dssp SCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence 58999999999999999999999998755
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=83.01 E-value=1.3 Score=34.33 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=24.9
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCCc
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP 31 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 31 (295)
|.|.+|+++++.|.+.|.+|++++-....
T Consensus 43 GfGnVG~~~A~~L~e~Gakvv~vsD~~G~ 71 (293)
T d1hwxa1 43 GFGNVGLHSMRYLHRFGAKCVAVGESDGS 71 (293)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEEETTEE
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEEccchh
Confidence 57999999999999999999998765433
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=82.64 E-value=0.61 Score=33.95 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=53.8
Q ss_pred CCcchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEEEc
Q 022578 4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYDI 79 (295)
Q Consensus 4 tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi~~ 79 (295)
+|-+|...+..+...|. +|+++++++++... .. .-+.+.+. |..+. +.+.++....++|++|.+
T Consensus 34 aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~----------a~-~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~ 101 (195)
T d1kola2 34 AGPVGLAAAASARLLGAAVVIVGDLNPARLAH----------AK-AQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDA 101 (195)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----------HH-HTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred cCHHHHHHHHHHHhhcccceeeecccchhhHh----------hh-hccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence 58999887777777775 78888888766321 11 12444443 33332 445555555689999999
Q ss_pred ccCC--------------hhcHHHHHHhCCCCCcEEEee
Q 022578 80 NGRE--------------ADEVEPILDALPNLEQFIYCS 104 (295)
Q Consensus 80 a~~~--------------~~~~~~ll~~~~~~~~~i~~S 104 (295)
.|.. .......++.++...+++.+.
T Consensus 102 vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G 140 (195)
T d1kola2 102 VGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 140 (195)
T ss_dssp CCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred ccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEee
Confidence 8842 223555666666444666554
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=81.73 E-value=1.9 Score=32.36 Aligned_cols=28 Identities=21% Similarity=0.249 Sum_probs=24.4
Q ss_pred cCCcchHHHHHHHHHCCCeEEEEecCCC
Q 022578 3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA 30 (295)
Q Consensus 3 atG~iG~~l~~~L~~~g~~V~~~~r~~~ 30 (295)
|.|.+|+++++.|.+.|.+|++++-...
T Consensus 38 GfGnVG~~~a~~L~~~Gakvv~vsD~~g 65 (242)
T d1v9la1 38 GMGNVGRWTAYWLEKMGAKVIAVSDING 65 (242)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEEECSSC
T ss_pred CCCHHHHHHHHHHHHcCCeEEEeecccc
Confidence 5799999999999999999998885543
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=80.61 E-value=8.2 Score=30.90 Aligned_cols=100 Identities=8% Similarity=-0.031 Sum_probs=59.7
Q ss_pred chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhccCCeEEEEecCCCh---HHHHHhhhcCCCcEEEEcccCC
Q 022578 7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYDINGRE 83 (295)
Q Consensus 7 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi~~a~~~ 83 (295)
-|-...+.|.+.|.+|+-+-+.......+.. ...+.....+-+.+..|+.++ +.+.++++ .+|+||+..-..
T Consensus 22 agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~---~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~--~aDv~i~n~rpg 96 (402)
T d1xk7a1 22 AGPFAGQMFAEWGAEVIWIENVAWADTIRVQ---PNYPQLSRRNLHALSLNIFKDEGREAFLKLME--TTDIFIEASKGP 96 (402)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSSCCGGGGS---SSHHHHHTTTCEEEEECTTSHHHHHHHHHHHT--TCSEEEEECSSS
T ss_pred HHHHHHHHHHHhCCeEEEECCCCCCCccccC---CchhHHhCCCCeEEEEeCcCHHHHHHHHHHHh--hcCCceeeeccc
Confidence 3667777888899999998754422111111 112233345778899999875 56778888 999999875442
Q ss_pred hhc-HHHHHHhCC-CCCcEEEeeccccccCC
Q 022578 84 ADE-VEPILDALP-NLEQFIYCSSAGVYLKS 112 (295)
Q Consensus 84 ~~~-~~~ll~~~~-~~~~~i~~Ss~~v~~~~ 112 (295)
+.. ..-=-+.++ -..++||+|- .-||..
T Consensus 97 ~~~~lGl~~~~L~~~nP~lI~~si-sgfG~~ 126 (402)
T d1xk7a1 97 AFARRGITDEVLWQHNPKLVIAHL-SGFGQY 126 (402)
T ss_dssp HHHHTTCCHHHHHHHCTTCEEEEE-ESSCSS
T ss_pred ccccccccccchhhccccccceee-ecccCC
Confidence 210 000001122 3468899885 457754
|