Citrus Sinensis ID: 022599

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
Protein Sequence
MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYETLCCSSCKAAANGL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHEEEHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccc
Coil and Loop (DISEMBL)
mesrvlsrattttttisslrrsplenhqnvsfislkpigavgeggnviwgrqlrpalllessnapaglfagkkEILRPilatasspaegsdsageaapvrffdrypalvTGFFFFMWYFLNVIFNILNkriynyfpyPYFVSVIHLLVGVVYCLVSWAvglpkrapidskLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYETLCCSSCKAAANGL
Flexible Loop (DISEMBL)
mesrvlsrattttttisslrrsplenhqnvsFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATasspaegsdsaGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYETLCCSSCKAAANGL
Low Complexity Region (SEG)
MESRVLSRAttttttISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYETLCCSSCKAAANGL
Disordered region (IsUnstruct)
*****************************VSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPIL*****************PVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYETLCCSSCK******
Disordered Region (DISOPRED)
**********************************************************************************************************ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMV******************
Disordered Region (DISEMBL)
****************SSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILAT*************AAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYETLCCSSCKAAANGL
Disordered Region (DISPRO)
***************************************************************************************************RFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFY***************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYETLCCSSCKAAANGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	294	2.2.26 [Sep-21-2011]
Q9ZSR7	410	Triose phosphate/phosphat	yes	no	0.911	0.653	0.746	1e-112
P21727	402	Triose phosphate/phosphat	N/A	no	0.887	0.649	0.752	1e-111
P49131	408	Triose phosphate/phosphat	N/A	no	0.914	0.659	0.725	1e-108
P49132	407	Triose phosphate/phosphat	N/A	no	0.911	0.658	0.711	1e-106
P11869	404	Triose phosphate/phosphat	N/A	no	0.894	0.650	0.698	1e-104
P52177	407	Triose phosphate/phosphat	N/A	no	0.894	0.646	0.719	1e-102
Q9FTT3	417	Triose phosphate/phosphat	yes	no	0.761	0.537	0.758	1e-98
P29463	414	Triose phosphate/phosphat	N/A	no	0.901	0.640	0.675	8e-96
P49133	409	Triose phosphate/phosphat	N/A	no	0.795	0.572	0.735	2e-89
Q9M5A9	388	Glucose-6-phosphate/phosp	no	no	0.656	0.497	0.446	5e-42

>sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=2 SV=1

 Score =  404 bits (1037), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/280 (74%), Positives = 230/280 (82%), Gaps = 12/280 (4%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFIS-----LKPIGAVGEGGNVIWGRQLRP 55
           MESRVL RAT     I  LRR     H+  S  S     +KPIG +GEG N+I GRQLRP
Sbjct: 1   MESRVLLRATANVVGIPKLRRPIGAIHRQFSTASSSSFSVKPIGGIGEGANLISGRQLRP 60

Query: 56  ALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFF 115
            LLL+SS    G    K+EIL+P+ A A   AEG D+AG+A  V F  +YP LVTGFFFF
Sbjct: 61  ILLLDSSAINGG---EKREILKPVKAAA---AEGGDTAGDAK-VGFLAKYPWLVTGFFFF 113

Query: 116 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 175
           MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SW+VGLPKRAPIDS LLK+L
Sbjct: 114 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVL 173

Query: 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 235
           IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI+GQ +P+TLWLSLAPV
Sbjct: 174 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPV 233

Query: 236 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           V+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAM
Sbjct: 234 VLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAM 273

Triose phosphate/phosphate translocator that transports inorganic phosphate, 3-phosphoglycerate (3-PGA) and triose phosphate. Functions in the export of photoassimilates from chloroplasts during the day. In the light, triose phosphates are exported from the chloroplast stroma in counter exchange with inorganic phosphate (Pi), generated during sucrose biosynthesis in the cytosol. Involved in photosynthetic acclimation, a light response resulting in increased tolerance to high-intensity light.
Arabidopsis thaliana (taxid: 3702)

>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1

 Score =  402 bits (1033), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/279 (75%), Positives = 227/279 (81%), Gaps = 18/279 (6%)

Query: 1   MESRVLSRATTTTT--TISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALL 58
           MESRVLSRATT ++  T++ L R PL N    S  S+K  G+V +GGN++WGRQLRP L 
Sbjct: 1   MESRVLSRATTLSSLPTLNKLHRLPLAN---ASLPSVKSFGSVSDGGNLVWGRQLRPELC 57

Query: 59  LESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGE--AAPVRFFDRYPALVTGFFFFM 116
                  + +      +LRP  ATA     G+DSAGE   APV FF RYPAL TGFFFF 
Sbjct: 58  -------SPVLKKGASLLRPCPATAG----GNDSAGEEKVAPVGFFSRYPALTTGFFFFT 106

Query: 117 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLI 176
           WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPID  LLKLLI
Sbjct: 107 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLI 166

Query: 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVV 236
           PVAVCHALGHVTSNVSFAAVAVSFTHT+KALEPFFNAAASQFILGQ +P+TLWLSLAPVV
Sbjct: 167 PVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVV 226

Query: 237 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           IGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct: 227 IGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAM 265

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Pisum sativum (taxid: 3888)

>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1

 Score =  392 bits (1008), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/277 (72%), Positives = 218/277 (78%), Gaps = 8/277 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLS   TT + I  L R               P      GGN++WGRQLRP+LL  
Sbjct: 1   MESRVLSSGATTISGIPRLTRPAGRTTTTTVVAVASPAKLNTNGGNLVWGRQLRPSLLNL 60

Query: 61  SSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWY 118
             ++P  L     K+++L+P  ATAS      DSAG+AAPV FF +YP LVTGFFFFMWY
Sbjct: 61  DHSSPVSLVTKPVKRDVLKPCTATAS------DSAGDAAPVGFFAKYPFLVTGFFFFMWY 114

Query: 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178
           FLNVIFNILNK+IYNYFPYPYFVS IHL VGVVYCL  WAVGLPKRAP+DS LLKLLIPV
Sbjct: 115 FLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPV 174

Query: 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238
           A CHALGHVTSNVSFAAVAVSFTHTIK+LEPFFNAAASQFILGQ +P+TLWLSLAPVVIG
Sbjct: 175 AFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIG 234

Query: 239 VSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           VSMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct: 235 VSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAM 271

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Flaveria pringlei (taxid: 4226)

>sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1

 Score =  385 bits (988), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/277 (71%), Positives = 218/277 (78%), Gaps = 9/277 (3%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLS   T  + +  L + P       +     P      GGNV+WGRQLRP+LL  
Sbjct: 1   MESRVLSSGATAISGVPRLTK-PAGRITTTTVAVAFPARLNATGGNVVWGRQLRPSLLNL 59

Query: 61  SSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWY 118
             ++P  L     K+++L+P  ATAS      DSAG+AAPV F  +YP LVTGFFFFMWY
Sbjct: 60  DHSSPVSLVTKPVKRDVLKPCSATAS------DSAGDAAPVGFLAKYPFLVTGFFFFMWY 113

Query: 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178
           FLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL SW VGLPKRAP+DS +LKLLIPV
Sbjct: 114 FLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPV 173

Query: 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238
             CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P++LWLSLAPVVIG
Sbjct: 174 GFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIG 233

Query: 239 VSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           VSMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct: 234 VSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAM 270

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates. In addition, it can also bind and transport phosphoenolpyruvate, thereby increasing the photosynthetic efficiency of C4-plants.

Flaveria trinervia (taxid: 4227)

>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1

 Score =  377 bits (969), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/279 (69%), Positives = 220/279 (78%), Gaps = 16/279 (5%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSF---ISLK-PIGAVGEGGNVIWGRQLRPA 56
           MESRVLSR    TT I++L +    + +  SF     +K P+G V +GG++ WGRQLRP 
Sbjct: 1   MESRVLSR----TTAIAALPKLFRPSREAASFGFATGVKTPVGLVKDGGSLTWGRQLRPV 56

Query: 57  LLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFM 116
           LLLE      G    ++E       TA  P   +  +   A   F ++YPALVTG FFFM
Sbjct: 57  LLLEPVQT--GPVCSRRE------KTAVQPCRAASGSSGEAKTGFLEKYPALVTGSFFFM 108

Query: 117 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLI 176
           WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL SW+VGLPKRAP+DSKLLKLLI
Sbjct: 109 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLI 168

Query: 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVV 236
           PVAVCHA+GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P+TLWLSLAPVV
Sbjct: 169 PVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVV 228

Query: 237 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           IGVSMASLTELSFNW GFISAMISN+SFTYRS+YSKKAM
Sbjct: 229 IGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKKAM 267

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Spinacia oleracea (taxid: 3562)

>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1

 Score =  373 bits (957), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/282 (71%), Positives = 230/282 (81%), Gaps = 19/282 (6%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLE--NHQ----NVSFISL-KPIGAVGEGGNVIWGRQL 53
           MESRVL RAT T T +  LRR P+   N Q    + SF +  KPIG++GEGGN+I GRQL
Sbjct: 1   MESRVLLRATETVTGVPQLRR-PIRAINRQFSTASSSFTAFAKPIGSIGEGGNLISGRQL 59

Query: 54  RPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFF 113
           RP LLL+S          K+EIL+P+ A +   AEG DSAGE   V F  +YP LVTG  
Sbjct: 60  RPLLLLDSLPE-------KREILKPVRAAS---AEGGDSAGETK-VGFLGKYPWLVTGIL 108

Query: 114 FFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLK 173
             MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW+VGLPKRAP++S +LK
Sbjct: 109 LLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILK 168

Query: 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233
           +LIPVAVCHA+GHVTSNVSFAAVAVSFTHTIKALEPFFNA+ASQF+LGQ +P+TLWLSLA
Sbjct: 169 VLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLA 228

Query: 234 PVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           PVV+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAM
Sbjct: 229 PVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAM 270

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Brassica oleracea var. botrytis (taxid: 3715)

>sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1

 Score =  359 bits (921), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 182/240 (75%), Positives = 205/240 (85%), Gaps = 16/240 (6%)

Query: 43  EGGNVIWGRQLRPALLL-------ESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGE 95
           +GG ++WGRQLRPALLL       +   +P+   AG+++ LRP       PA  + ++GE
Sbjct: 51  DGGQLVWGRQLRPALLLPAAGGLLQPPTSPSSSQAGRRQALRP-------PA--AATSGE 101

Query: 96  AAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV 155
           A P  F ++YPAL+TGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHLLVGVVYCLV
Sbjct: 102 AKPAGFLEKYPALITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLV 161

Query: 156 SWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAA 215
           SW VGLPKRAPI+S LLKLL PVA+CHALGHVTSNVSFA VAVSF HTIKALEPFFNAAA
Sbjct: 162 SWTVGLPKRAPINSTLLKLLFPVALCHALGHVTSNVSFATVAVSFAHTIKALEPFFNAAA 221

Query: 216 SQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           +QF+LGQQ+PL LWLSLAPVV+GVSMASLTELSFNWTGFI+AMISNISFTYRSIYSKKAM
Sbjct: 222 TQFVLGQQVPLPLWLSLAPVVLGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKKAM 281

Triose phosphate/phosphate translocator that may function in the export of photoassimilates from chloroplasts during the day.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1

 Score =  350 bits (897), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 194/287 (67%), Positives = 214/287 (74%), Gaps = 22/287 (7%)

Query: 1   MESRVLSRATTTTTTISSLRRSP------------LENHQNVSFISLKPIGAVGEGGNVI 48
           MESRVL+   T       L R P            +        ++ KP+G +  G N+I
Sbjct: 1   MESRVLTGGATAIRGGLPLLRKPAAVMKFTTAAHAISRDFPAGAVTAKPVGPLIAGPNLI 60

Query: 49  WGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPAL 108
           WGRQLRPA+LLE+S         K+E ++P  A ASS + GS  +   A V FF++   L
Sbjct: 61  WGRQLRPAILLETSP--------KRESIKPCSAAASS-SAGSSDSSGDAKVGFFNK-ATL 110

Query: 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID 168
            TGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPID
Sbjct: 111 TTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPID 170

Query: 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTL 228
           S  LKLL PVA CHALGHVTSNVSFAAV VSFTHT+KALEPFFNAAASQFILGQQ+PL L
Sbjct: 171 STQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLAL 230

Query: 229 WLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           WLSLAPVV+GVSMASLTELSFNW GF SAMISNISFTYRSIYSKKAM
Sbjct: 231 WLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAM 277

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Solanum tuberosum (taxid: 4113)

>sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1

 Score =  329 bits (843), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 178/242 (73%), Positives = 207/242 (85%), Gaps = 8/242 (3%)

Query: 34  SLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSA 93
           ++K   AV +   ++WGRQLRPALLL ++  P+   A ++  L+P       PA  ++SA
Sbjct: 40  TVKCAAAVPDAAPIVWGRQLRPALLLPAALLPSLQPA-RRHTLQP-------PAAAAESA 91

Query: 94  GEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYC 153
           GEA  V F ++YPALVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVS+IHL+VGVVYC
Sbjct: 92  GEAKSVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYC 151

Query: 154 LVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNA 213
           L+SW+VGLPKRAPI+  LLKLL PVA+CH +GH+TSNVSFAAVAVSF HTIKALEPFF+A
Sbjct: 152 LISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSA 211

Query: 214 AASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKK 273
           AA+QFILGQQ+P +LWLSLAPVVIGVSMASLTELSFNWTGFI+AMISNISFTYRSIYSKK
Sbjct: 212 AATQFILGQQVPFSLWLSLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKK 271

Query: 274 AM 275
           AM
Sbjct: 272 AM 273

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates. In addition, it can also bind and transport phosphoenolpyruvate, thereby increasing the photosynthetic efficiency of C4-plants.

Zea mays (taxid: 4577)

>sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1

 Score =  171 bits (433), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 123/195 (63%), Gaps = 2/195 (1%)

Query: 81  ATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYF 140
           A  S P    D A  A      +    L  G +F  W+ LNV+FNI NK++ N +PYP+ 
Sbjct: 70  ADRSEPHPIGDDAAAAETKS--EAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWL 127

Query: 141 VSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 200
            S + L  G +  L+SWAVG+ +    D    K L PVAV H +GHV + VS + VAVSF
Sbjct: 128 TSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSF 187

Query: 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMIS 260
           TH IK+ EP F+   S+FILG+  P +++LSL P++ G ++++LTEL+FN  GF+ AMIS
Sbjct: 188 THIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMIS 247

Query: 261 NISFTYRSIYSKKAM 275
           N++F +R+I+SKK M
Sbjct: 248 NLAFVFRNIFSKKGM 262

Glucose 6-phosphate (Glc6P) transporter. Transports also inorganic phosphate, 3-phosphoglycerate, triose phosphates and, to a leser extent, phosphoenolpyruvate. Responsible for the transport of Glc6P into plastids of heterotrophic tissues where it can be used as a carbon source for starch biosynthesis, as substrate for fatty acid biosynthesis or as substrate for NADPH generation via the oxidative pentose phosphate pathway (OPPP). Required for pollen maturation and embryo sac development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
255536723	406	Triose phosphate/phosphate translocator,	0.911	0.660	0.836	1e-128
224125582	408	predicted protein [Populus trichocarpa]	0.914	0.659	0.812	1e-123
224077056	408	predicted protein [Populus trichocarpa]	0.908	0.654	0.799	1e-123
147834373	443	hypothetical protein VITISV_028555 [Viti	0.911	0.604	0.818	1e-122
225443598	406	PREDICTED: triose phosphate/phosphate tr	0.911	0.660	0.818	1e-122
356521410	429	PREDICTED: LOW QUALITY PROTEIN: triose p	0.908	0.622	0.779	1e-117
449433798	411	PREDICTED: triose phosphate/phosphate tr	0.911	0.652	0.772	1e-117
356548666	406	PREDICTED: triose phosphate/phosphate tr	0.901	0.652	0.788	1e-116
9295273	404	triose phosphate/phosphate translocator	0.884	0.643	0.751	1e-110
21593093	410	phosphate/triose-phosphate translocator	0.911	0.653	0.75	1e-110

>gi|255536723|ref|XP_002509428.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis] gi|223549327|gb|EEF50815.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/276 (83%), Positives = 248/276 (89%), Gaps = 8/276 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLSRATTT +++  LRR P+      SF+S+KPIG VGEGGN+IWGRQLRP+LLLE
Sbjct: 1   MESRVLSRATTTLSSLPHLRR-PMRESNTTSFVSMKPIGTVGEGGNLIWGRQLRPSLLLE 59

Query: 61  SSNAPAGLFAGKKEILRPILATASSPAEGSDSAGE-AAPVRFFDRYPALVTGFFFFMWYF 119
           SS A       K+E LRP +A ASSPAEGSDS+G+  APV FF++YPALVTGFFFFMWYF
Sbjct: 60  SSPAT------KRENLRPTMAAASSPAEGSDSSGDKVAPVGFFEKYPALVTGFFFFMWYF 113

Query: 120 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVA 179
           LNVIFNILNK+IYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDS LLKLLIPVA
Sbjct: 114 LNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSNLLKLLIPVA 173

Query: 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239
           VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +P+TLWLSLAPVVIGV
Sbjct: 174 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGV 233

Query: 240 SMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           SMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct: 234 SMASLTELSFNWIGFISAMISNISFTYRSIYSKKAM 269

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125582|ref|XP_002329840.1| predicted protein [Populus trichocarpa] gi|222870902|gb|EEF08033.1| predicted protein [Populus trichocarpa]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/277 (81%), Positives = 244/277 (88%), Gaps = 8/277 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLSRATT       LR S    + + SF+S+KPIGAV EGGN+IWG QLRP+LLLE
Sbjct: 1   MESRVLSRATTVAHVRRPLRES--NGNASCSFLSIKPIGAVSEGGNLIWGTQLRPSLLLE 58

Query: 61  SSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEA--APVRFFDRYPALVTGFFFFMWY 118
           +S         +KEIL P++A ASSPAEGSDS+G+   APV FFD+YPALVTGFFFFMWY
Sbjct: 59  ASYP----VTARKEILWPVMAAASSPAEGSDSSGDGKVAPVGFFDKYPALVTGFFFFMWY 114

Query: 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178
           FLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSWAVGLPKRAP+DS LLKLLIPV
Sbjct: 115 FLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWAVGLPKRAPMDSNLLKLLIPV 174

Query: 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238
           AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQ+P+TLWLSLAPVV+G
Sbjct: 175 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQIPITLWLSLAPVVLG 234

Query: 239 VSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           VS+ASLTELSFNWTGFISAMISNISFTYRSIYSKKAM
Sbjct: 235 VSVASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 271

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077056|ref|XP_002305112.1| predicted protein [Populus trichocarpa] gi|222848076|gb|EEE85623.1| predicted protein [Populus trichocarpa]

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/279 (79%), Positives = 246/279 (88%), Gaps = 12/279 (4%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVS--FISLKPIGAVGEGGNVIWGRQLRPALL 58
           MESRV S ATT    I+ +RR   E+H N S  FIS+KPIGAVGEGGN+IWGRQLRP+LL
Sbjct: 1   MESRVFSHATT----IAHVRRPLRESHSNTSCSFISIKPIGAVGEGGNLIWGRQLRPSLL 56

Query: 59  LESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEA--APVRFFDRYPALVTGFFFFM 116
           LE+S+        +K+ILRP++A ASSPAEGSDS+G+   AP+ FF++ PALVTGFFFFM
Sbjct: 57  LEASSP----MNARKDILRPVMAAASSPAEGSDSSGDGKVAPIGFFEKNPALVTGFFFFM 112

Query: 117 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLI 176
           WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPIDS LLKLLI
Sbjct: 113 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDSNLLKLLI 172

Query: 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVV 236
           PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P+TLWLSL PVV
Sbjct: 173 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLLPVV 232

Query: 237 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           +GVSMASLTELSFNWTGFISAMISNISFTYRS+YSKKAM
Sbjct: 233 LGVSMASLTELSFNWTGFISAMISNISFTYRSLYSKKAM 271

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147834373|emb|CAN65381.1| hypothetical protein VITISV_028555 [Vitis vinifera]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/276 (81%), Positives = 240/276 (86%), Gaps = 8/276 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLS ATT    IS L R        V F   +PIGAVG+GGN+IWGRQLRPAL+LE
Sbjct: 1   MESRVLSGATT----ISGLVRLRKPVRDTVCFAPARPIGAVGDGGNLIWGRQLRPALILE 56

Query: 61  SSNAPA-GLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYF 119
           S  AP  G+  GK+EILRP +A+ SSPAEGSDSAG+A  + F D+YPALVTGFFFFMWYF
Sbjct: 57  S--APVVGMTTGKREILRPTMASTSSPAEGSDSAGDAK-IGFLDKYPALVTGFFFFMWYF 113

Query: 120 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVA 179
           LNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPIDS LLKLLIPVA
Sbjct: 114 LNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWGVGLPKRAPIDSNLLKLLIPVA 173

Query: 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239
           VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +PLTLWLSLAPVV+GV
Sbjct: 174 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVLGV 233

Query: 240 SMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           SMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct: 234 SMASLTELSFNWIGFISAMISNISFTYRSIYSKKAM 269

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443598|ref|XP_002278829.1| PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic [Vitis vinifera] gi|297740430|emb|CBI30612.3| unnamed protein product [Vitis vinifera]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/276 (81%), Positives = 240/276 (86%), Gaps = 8/276 (2%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLS ATT    IS L R        V F   +PIGAVG+GGN+IWGRQLRPAL+LE
Sbjct: 1   MESRVLSGATT----ISGLVRLRKPVRDTVCFAPARPIGAVGDGGNLIWGRQLRPALILE 56

Query: 61  SSNAPA-GLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYF 119
           S  AP  G+  GK+EILRP +A+ SSPAEGSDSAG+A  + F D+YPALVTGFFFFMWYF
Sbjct: 57  S--APVVGMTTGKREILRPTMASTSSPAEGSDSAGDAK-IGFLDKYPALVTGFFFFMWYF 113

Query: 120 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVA 179
           LNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAPIDS LLKLLIPVA
Sbjct: 114 LNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWGVGLPKRAPIDSNLLKLLIPVA 173

Query: 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239
           VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +PLTLWLSLAPVV+GV
Sbjct: 174 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVLGV 233

Query: 240 SMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           SMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct: 234 SMASLTELSFNWIGFISAMISNISFTYRSIYSKKAM 269

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521410|ref|XP_003529349.1| PREDICTED: LOW QUALITY PROTEIN: triose phosphate/phosphate translocator, chloroplastic-like [Glycine max]

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/277 (77%), Positives = 236/277 (85%), Gaps = 10/277 (3%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLSRA T ++ +  LR+ P E   + S +++K +G+V +GGN+IWGRQLRP L   
Sbjct: 1   MESRVLSRAGTLSS-LPHLRKPPREAVSSASLVAVKAVGSVADGGNLIWGRQLRPELC-- 57

Query: 61  SSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEA--APVRFFDRYPALVTGFFFFMWY 118
                + +   +  +LRP LA ASSPAEGSDSAGEA  AP  FFD+YPALVTGFFFF WY
Sbjct: 58  -----SPVLKREAVLLRPCLAAASSPAEGSDSAGEAKVAPAGFFDKYPALVTGFFFFTWY 112

Query: 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178
           FLNVIFNILNK+IYNYFPYPYFVSVIHL VGV YCLVSWAVGLPKRAPIDS LLKLLIPV
Sbjct: 113 FLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVAYCLVSWAVGLPKRAPIDSNLLKLLIPV 172

Query: 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238
           AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +P+TLWLSLAPVVIG
Sbjct: 173 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIG 232

Query: 239 VSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           VSMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct: 233 VSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAM 269

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433798|ref|XP_004134684.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Cucumis sativus]

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/281 (77%), Positives = 240/281 (85%), Gaps = 13/281 (4%)

Query: 1   MESRVLSRATTTTTTISSLR---RSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPAL 57
           MES  LSRAT+    I +LR   R    N  +V+F+  +PI    EG N+IWGRQLRP+L
Sbjct: 1   MESHFLSRATSFAGAIPTLRKLHRDVTSNSNHVAFVHTRPIA---EGANLIWGRQLRPSL 57

Query: 58  LLESSNAPAGLFAGKKEILRPILATASS-PAEGSDSAGEA--APVRFFDRYPALVTGFFF 114
           LL++ +    L +GK++ +RP  A ASS PA GSDSAG+A  APV FF++YPALVTGFFF
Sbjct: 58  LLDTPH----LVSGKRDTIRPTFAAASSSPAGGSDSAGDAKVAPVGFFEKYPALVTGFFF 113

Query: 115 FMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKL 174
           FMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL+VGVVYCL+SWAVGLPKRAPIDS LLKL
Sbjct: 114 FMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLVVGVVYCLISWAVGLPKRAPIDSTLLKL 173

Query: 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAP 234
           LIPVA CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +P+TLWLSLAP
Sbjct: 174 LIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAP 233

Query: 235 VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM
Sbjct: 234 VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 274

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548666|ref|XP_003542721.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic [Glycine max]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/279 (78%), Positives = 237/279 (84%), Gaps = 14/279 (5%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLE 60
           MESRVLSRA T  + +  LR+ P E     S +++K +G+V +GGN+IWGRQLRP L   
Sbjct: 1   MESRVLSRAGTLFS-LPHLRKLPREVGAGPSLVAVKAVGSVADGGNLIWGRQLRPELC-- 57

Query: 61  SSNAPAGLFAGKKE--ILRPILATASSPAEGSDSAGEA--APVRFFDRYPALVTGFFFFM 116
              +PA     KKE  +LRP LA ASSPAEGSDSAGEA  AP  FF++YPALVTGFFFF 
Sbjct: 58  ---SPAL----KKEAVLLRPCLAAASSPAEGSDSAGEAKVAPAGFFEKYPALVTGFFFFT 110

Query: 117 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLI 176
           WYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGV YCLVSWAVGLPKRAPIDS LLKLLI
Sbjct: 111 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVAYCLVSWAVGLPKRAPIDSNLLKLLI 170

Query: 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVV 236
           PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +P+TLWLSLAPVV
Sbjct: 171 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVV 230

Query: 237 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           IGVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct: 231 IGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAM 269

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9295273|gb|AAF86906.1|AF223358_1 triose phosphate/phosphate translocator precursor [Mesembryanthemum crystallinum]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/282 (75%), Positives = 232/282 (82%), Gaps = 22/282 (7%)

Query: 1   MESRVLSRATTTTTTISSLRR--SPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALL 58
           MESRVLSRAT     I++L R   P     ++   ++KP+GAV +GGN+IWGRQLRP LL
Sbjct: 1   MESRVLSRATA----IAALPRLSRPRREAASLGIAAVKPVGAVKDGGNLIWGRQLRPVLL 56

Query: 59  LES-SNAPAGLFAGKKEILRPILATASSP----AEGSDSAGEAAPVRFFDRYPALVTGFF 113
           LE     P      +KE      +TA  P    AEGSDSAGEA  V F  +YPALVTGFF
Sbjct: 57  LEPVQTGPVS----RKE------STAVQPCRAAAEGSDSAGEAK-VGFLQKYPALVTGFF 105

Query: 114 FFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLK 173
           FFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHLLVGV+YCLVSWAVGLPKRAPID  LLK
Sbjct: 106 FFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVIYCLVSWAVGLPKRAPIDGNLLK 165

Query: 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233
           LLIPVA+CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNA+ASQFILGQ +P+TLWLSLA
Sbjct: 166 LLIPVALCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFILGQPIPITLWLSLA 225

Query: 234 PVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           PVV+GV+MASLTELSFNWTGFISAMISNISFTYRSIYSKKAM
Sbjct: 226 PVVLGVAMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 267

Source: Mesembryanthemum crystallinum

Species: Mesembryanthemum crystallinum

Genus: Mesembryanthemum

Family: Aizoaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593093|gb|AAM65042.1| phosphate/triose-phosphate translocator precursor [Arabidopsis thaliana]

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/280 (75%), Positives = 230/280 (82%), Gaps = 12/280 (4%)

Query: 1   MESRVLSRATTTTTTISSLRRSPLENHQNVSFIS-----LKPIGAVGEGGNVIWGRQLRP 55
           MESRVL RAT     I  LRR     H+  S  S     +KPIG +GEG N+I GRQLRP
Sbjct: 1   MESRVLLRATANVVGIPKLRRPIGAIHRQFSTASSSSFSVKPIGGIGEGANLISGRQLRP 60

Query: 56  ALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFF 115
            LLL+SS    G    K+EIL+P+ A A   AEG D+AGEA  V F  +YP LVTGFFFF
Sbjct: 61  ILLLDSSAINGG---EKREILKPVKAAA---AEGGDTAGEAK-VGFLAKYPWLVTGFFFF 113

Query: 116 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 175
           MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SW+VGLPKRAPIDS LLK+L
Sbjct: 114 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVL 173

Query: 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 235
           IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI+GQ +P+TLWLSLAPV
Sbjct: 174 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPV 233

Query: 236 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           V+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAM
Sbjct: 234 VLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAM 273

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
TAIR|locus:2161423	415	APE2 "ACCLIMATION OF PHOTOSYNT	0.911	0.645	0.742	2.6e-102
TAIR|locus:2160175	388	GPT1 "glucose 6-phosphate/phos	0.656	0.497	0.451	8.4e-42
TAIR|locus:2036778	388	GPT2 "glucose-6-phosphate/phos	0.571	0.432	0.482	5.9e-41
TAIR|locus:2151381	417	AT5G17630 "AT5G17630" [Arabido	0.755	0.532	0.396	6.8e-40
UNIPROTKB|Q84QU8	407	PPT2 "Phosphoenolpyruvate/phos	0.588	0.425	0.480	2.9e-39
UNIPROTKB|Q69VR7	408	PPT1 "Phosphoenolpyruvate/phos	0.649	0.468	0.445	9.9e-39
TAIR|locus:2145944	408	CUE1 "CAB UNDEREXPRESSED 1" [A	0.846	0.610	0.353	6.5e-35
UNIPROTKB|Q5VQL3	393	PPT3 "Phosphoenolpyruvate/phos	0.778	0.582	0.383	1.1e-34
TAIR|locus:2084203	383	PPT2 "phosphoenolpyruvate (pep	0.574	0.441	0.437	4.6e-34
GENEDB_PFALCIPARUM|PFE0410w	342	PFE0410w "triose or hexose pho	0.578	0.497	0.373	9.4e-27

TAIR|locus:2161423 APE2 "ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 208/280 (74%), Positives = 229/280 (81%)

Query:     1 MESRVLSRAXXXXXXISSLRRSPLENHQNVSF-----ISLKPIGAVGEGGNVIWGRQLRP 55
             MESRVL RA      I  LRR     H+  S       S+KPIG +GEG N+I GRQLRP
Sbjct:     1 MESRVLLRATANVVGIPKLRRPIGAIHRQFSTASSSSFSVKPIGGIGEGANLISGRQLRP 60

Query:    56 ALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFF 115
              LLL+SS    G    K+EIL+P+ A A   AEG D+AG+A  V F  +YP LVTGFFFF
Sbjct:    61 ILLLDSSAINGG---EKREILKPVKAAA---AEGGDTAGDAK-VGFLAKYPWLVTGFFFF 113

Query:   116 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 175
             MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SW+VGLPKRAPIDS LLK+L
Sbjct:   114 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVL 173

Query:   176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 235
             IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI+GQ +P+TLWLSLAPV
Sbjct:   174 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPV 233

Query:   236 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
             V+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAM
Sbjct:   234 VLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAM 273

GO:0005215 "transporter activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015717 "triose phosphate transport" evidence=IMP

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IMP;IDA

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

TAIR|locus:2160175 GPT1 "glucose 6-phosphate/phosphate translocator 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 88/195 (45%), Positives = 125/195 (64%)

Query:    81 ATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYF 140
             A  S P    D A  AA  +  +    L  G +F  W+ LNV+FNI NK++ N +PYP+ 
Sbjct:    70 ADRSEPHPIGDDAA-AAETKS-EAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWL 127

Query:   141 VSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 200
              S + L  G +  L+SWAVG+ +    D    K L PVAV H +GHV + VS + VAVSF
Sbjct:   128 TSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSF 187

Query:   201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMIS 260
             TH IK+ EP F+   S+FILG+  P +++LSL P++ G ++++LTEL+FN  GF+ AMIS
Sbjct:   188 THIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMIS 247

Query:   261 NISFTYRSIYSKKAM 275
             N++F +R+I+SKK M
Sbjct:   248 NLAFVFRNIFSKKGM 262

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0007033 "vacuole organization" evidence=IMP

GO:0009553 "embryo sac development" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0015760 "glucose-6-phosphate transport" evidence=IDA

GO:0034389 "lipid particle organization" evidence=IMP

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP;RCA

GO:0009790 "embryo development" evidence=IMP

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2036778 GPT2 "glucose-6-phosphate/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 81/168 (48%), Positives = 114/168 (67%)

Query:   108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI 167
             L  G +F  W+ LNV+FNI NK++ N FPYP+  S + L  G +  LVSWA  +      
Sbjct:    95 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKT 154

Query:   168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLT 227
             D +  K L PVAV H +GHV + VS + VAVSFTH IK+ EP F+   S+F +G+  PL 
Sbjct:   155 DLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLP 214

Query:   228 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
             ++LSL P++ G ++A++TEL+FN TGF+ AMISN++F +R+I+SKK M
Sbjct:   215 VYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGM 262

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0015712 "hexose phosphate transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0007276 "gamete generation" evidence=IMP

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0015760 "glucose-6-phosphate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0010109 "regulation of photosynthesis" evidence=IMP

GO:0015979 "photosynthesis" evidence=IMP

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2151381 AT5G17630 "AT5G17630" [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 90/227 (39%), Positives = 135/227 (59%)

Query:    54 RPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFF 113
             +P L L +  + +G F+ K   +  + ++ S+P E SD  GEA       +   L  G  
Sbjct:    60 KPLLSLTNPESSSG-FSRKPRSIAAVGSSDSNPDEKSD-LGEAEKKE--KKAKTLQLGIV 115

Query:   114 FFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLK 173
             F +WYF N++FNI NK+  N FPYP+ ++   L  G ++ LV W+  L     I    + 
Sbjct:   116 FGLWYFQNIVFNIFNKKALNVFPYPWLLASFQLFAGSIWMLVLWSFKLYPCPKISKPFII 175

Query:   174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233
              L+  A+ H +GH+++ VSF+ VAVSFTH IK+ EP F+   S  +LG   PL +WLS+ 
Sbjct:   176 ALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSS-LLGDSYPLAVWLSIL 234

Query:   234 PVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYE 280
             P+V+G S+A++TE+SFN  G   AMISN+ F  R+IYSK+++  F E
Sbjct:   235 PIVMGCSLAAVTEVSFNLGGLSGAMISNVGFVLRNIYSKRSLQSFKE 281

GO:0005355 "glucose transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015297 "antiporter activity" evidence=ISS

GO:0015712 "hexose phosphate transport" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|Q84QU8 PPT2 "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 85/177 (48%), Positives = 114/177 (64%)

Query:   108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI 167
             L  G  F +WY  N+ FNI NK++   FPYP  ++ +   VG V  L  W  G+ +R  I
Sbjct:   105 LQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITTVQFAVGTVVALFMWITGILRRPKI 164

Query:   168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLT 227
                 L  ++P+AV H +G++ +N+S   VAVSFTHTIKA+EPFF+   S   LG+ LP T
Sbjct:   165 SGAQLFAILPLAVVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAIFLGE-LP-T 222

Query:   228 LW--LSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYETL 282
             +W  LSL P+V GV++ASLTE SFNW GF SAM SN++F  R++ SKK MV   E+L
Sbjct:   223 VWVILSLLPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESL 279

GO:0009670 "triose-phosphate:phosphate antiporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

UNIPROTKB|Q69VR7 PPT1 "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 85/191 (44%), Positives = 115/191 (60%)

Query:    92 SAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVV 151
             +AGEA           L  G  F +WY  N+ FNI NK++   FPYP  ++ +   VG V
Sbjct:    90 AAGEAGAEEGGGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTV 149

Query:   152 YCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFF 211
               L  W  G+ KR  I    L  ++P+A+ H +G++ +N+S   VAVSFTHTIKA+EPFF
Sbjct:   150 IALFMWITGILKRPKISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFF 209

Query:   212 NAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYS 271
             +   S   LG+     + LSL P+V GV++ASLTE SFNW GF SAM SN++F  R++ S
Sbjct:   210 SVLLSALFLGEMPTPFVVLSLVPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLS 269

Query:   272 KKAMVIFYETL 282
             KK MV   E+L
Sbjct:   270 KKLMVKKEESL 280

GO:0009670 "triose-phosphate:phosphate antiporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

TAIR|locus:2145944 CUE1 "CAB UNDEREXPRESSED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 93/263 (35%), Positives = 140/263 (53%)

Query:    18 SLRRSPLENHQNVSFISLKP-IGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEIL 76
             SLR  P+    + S +++ P + ++       W      + L   S  P+ +        
Sbjct:    22 SLRHHPITTAASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAWSGVPSPISHSLDTNR 81

Query:    77 RPILATA-SSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYF 135
                 ATA    AE  D++G+   V        L  G  F MWY  N+ FNI NK++    
Sbjct:    82 FRTAATAVPESAEEGDNSGKLTKV--------LELGLLFAMWYLFNIYFNIYNKQVLKAL 133

Query:   136 PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA 195
               P  V+++   VG V   + W + L KR  I    L  ++P+AV H LG++ +N+S   
Sbjct:   134 HAPMTVTLVQFAVGSVLITIMWVLNLYKRPKISGAQLAAILPLAVVHTLGNLFTNMSLGK 193

Query:   196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWL--SLAPVVIGVSMASLTELSFNWTG 253
             V+VSFTHTIKA+EPFF+   S   LG++ P T W+  ++ P+V GV++AS++E+SFNW G
Sbjct:   194 VSVSFTHTIKAMEPFFSVLLSAMFLGEK-P-TPWVLGAIVPIVGGVALASISEVSFNWAG 251

Query:   254 FISAMISNISFTYRSIYSKKAMV 276
             F SAM SN++   R++ SKK MV
Sbjct:   252 FSSAMASNLTNQSRNVLSKKVMV 274

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009528 "plastid inner membrane" evidence=TAS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|Q5VQL3 PPT3 "Phosphoenolpyruvate/phosphate translocator 3, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 89/232 (38%), Positives = 122/232 (52%)

Query:    44 GGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFD 103
             GG ++ G  L P  +         L +G + +   + A A +P    D+   A   R   
Sbjct:    32 GGGIVAGAAL-PLRVRGGQLMSLPLLSGGRAVTARV-AAAEAPLPADDADAAAGRERGAL 89

Query:   104 RYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPK 163
                A + G     WY LN+ FNI NK++    P+PY ++   L  G     + WA+ L  
Sbjct:    90 AETAQL-GAMIVAWYLLNIYFNIYNKQVLQPLPFPYTITAFQLAFGSFVIFLMWALKLHP 148

Query:   164 RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQ 223
                I    L  + P+A  H LG V +N+S + VAVSFTHTIKA EPFF    S F LG+ 
Sbjct:   149 APRISISQLAKIAPLAAGHMLGTVFTNMSLSKVAVSFTHTIKASEPFFTVLLSAFFLGET 208

Query:   224 LPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
               L +  SL P+V GV++ASLTELSFNW GF SAM SN+ +  R++ SKK +
Sbjct:   209 PSLLVLGSLVPIVGGVALASLTELSFNWIGFWSAMASNLLYQSRNVLSKKLL 260

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

TAIR|locus:2084203 PPT2 "phosphoenolpyruvate (pep)/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 74/169 (43%), Positives = 101/169 (59%)

Query:   108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI 167
             L  G  F +WY LN+ +NI NK++   +PYP  V+   L  G +   + W + L  R   
Sbjct:    77 LKLGGMFGVWYLLNIYYNIFNKQVLRVYPYPATVTAFQLGCGTLMIAIMWLLKLHPRPKF 136

Query:   168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLT 227
                   +++ +AV H LG++ +NVS   V VSFTHTIKA+EPFF    S  +LG+   L 
Sbjct:   137 SPSQFTVIVQLAVAHTLGNLLTNVSLGRVNVSFTHTIKAMEPFFTVLLSVLLLGEWPSLW 196

Query:   228 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMV 276
             +  SL P+V GVS+AS TE SFNW GF SAM SN++   R++ SKK MV
Sbjct:   197 IVCSLLPIVAGVSLASFTEASFNWIGFCSAMASNVTNQSRNVLSKKFMV 245

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015297 "antiporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GENEDB_PFALCIPARUM|PFE0410w PFE0410w "triose or hexose phosphate / phosphate translocator, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 65/174 (37%), Positives = 96/174 (55%)

Query:   105 YPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGL--- 161
             +  L     F  WY LNV++N+ NK+  N    P+F+S + L VG ++  + W  G+   
Sbjct:    40 FEKLKLALLFLTWYTLNVLYNVDNKKALNMVKLPWFISSMQLYVGWIFIFIYWISGMKKI 99

Query:   162 PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILG 221
             PK    D  +  +LI  +VCH   H  + ++ +A +VSFTH +KA EP F A  S  +L 
Sbjct:   100 PKIYSYDIFIRNILIQ-SVCHIFVHFGAVMAMSATSVSFTHVVKACEPVFTAIFSILLLK 158

Query:   222 QQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
             Q L +  +++L  +V GV  AS+ EL F W  F  A +SN   + RSIY+KK M
Sbjct:   159 QYLKINKYIALLIIVGGVVCASMKELHFTWIAFWCATLSNFGSSIRSIYAKKMM 212

GO:0008524 "glucose 6-phosphate:phosphate antiporter activity" evidence=ISS

GO:0020011 "apicoplast" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZSR7	TPT_ARATH	No assigned EC number	0.7464	0.9115	0.6536	yes	no
P52177	TPT1_BRAOB	No assigned EC number	0.7198	0.8945	0.6461	N/A	no
P21727	TPT_PEA	No assigned EC number	0.7526	0.8877	0.6492	N/A	no
P49131	TPT_FLAPR	No assigned EC number	0.7256	0.9149	0.6593	N/A	no
P49132	TPT_FLATR	No assigned EC number	0.7111	0.9115	0.6584	N/A	no
Q9FTT3	TPT_ORYSJ	No assigned EC number	0.7583	0.7619	0.5371	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_1240222 hypothetical protein (408 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	294
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	5e-86
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	5e-42
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	6e-04

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score =  259 bits (664), Expect = 5e-86
 Identities = 113/170 (66%), Positives = 135/170 (79%)

Query: 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI 167
           L TG  F +WYFLNV FNI NK++ N FPYPYF ++I L VG +YCL+SW+ GLPKR  I
Sbjct: 1   LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKI 60

Query: 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLT 227
            S LLKLL+PVA+ H +GHVTSNVS + VAVSFTHTIKA+EPFF+   S F LGQ+ P T
Sbjct: 61  SSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST 120

Query: 228 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVI 277
           LWLSL P+V GV++AS TELSFNW GF+SAMISNI+F  R+I+SKKAM I
Sbjct: 121 LWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTI 170

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score =  147 bits (373), Expect = 5e-42
 Identities = 70/164 (42%), Positives = 94/164 (57%), Gaps = 2/164 (1%)

Query: 114 FFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDS--KL 171
           F  WY LNV++ + NK   N  P P+ +S + L VG ++ L+ WA G  K   I S    
Sbjct: 54  FLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLF 113

Query: 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLS 231
           LK  +P  +CH   H  + +S    AVSFTH +KA EP F A  S   L Q L L  +LS
Sbjct: 114 LKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLS 173

Query: 232 LAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275
           L P+V GV++AS+ EL F W  F  AM+SN+  + RSI++KK M
Sbjct: 174 LIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTM 217

Length = 350

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 6/138 (4%)

Query: 139 YFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAV 198
           YF     L+  ++  L       P +     +LL+LL+  A+   + +V   V+   + V
Sbjct: 19  YFAVFRRLIFALLLLLPLLRRRPPLK-----RLLRLLLLGALQIGVFYVLYFVAVKRLPV 73

Query: 199 SFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA-SLTELSFNWTGFISA 257
                +  L P +    S  +  ++    + L+    + G  +  S   LS N  G +  
Sbjct: 74  GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLG 133

Query: 258 MISNISFTYRSIYSKKAM 275
           + S ISF   ++  K+ +
Sbjct: 134 LGSGISFALGTVLYKRLV 151

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	294
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.97
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.96
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.84
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.81
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.66
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.6
PRK11689	295	aromatic amino acid exporter; Provisional	99.58
PRK11272	292	putative DMT superfamily transporter inner membran	99.57
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.57
PLN00411	358	nodulin MtN21 family protein; Provisional	99.53
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.44
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.43
PRK15430	296	putative chloramphenical resistance permease RarD;	99.42
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.42
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.41
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.28
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.27
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.2
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.19
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.07
KOG1581	327	consensus UDP-galactose transporter related protei	98.88
KOG1580	337	consensus UDP-galactose transporter related protei	98.85
KOG2765	416	consensus Predicted membrane protein [Function unk	98.85
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.82
COG2510	140	Predicted membrane protein [Function unknown]	98.78
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.75
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.68
KOG1582	367	consensus UDP-galactose transporter related protei	98.64
PLN00411	358	nodulin MtN21 family protein; Provisional	98.48
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.46
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.43
PRK11272	292	putative DMT superfamily transporter inner membran	98.39
PRK11689	295	aromatic amino acid exporter; Provisional	98.39
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.35
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.17
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.15
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.14
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.12
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.12
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.06
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.04
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.03
PRK15430	296	putative chloramphenical resistance permease RarD;	97.99
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.98
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.84
COG2962	293	RarD Predicted permeases [General function predict	97.74
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.65
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.57
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.27
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.27
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.03
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.01
PRK11431	105	multidrug efflux system protein; Provisional	96.99
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.87
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.78
KOG2766	336	consensus Predicted membrane protein [Function unk	96.58
COG2076	106	EmrE Membrane transporters of cations and cationic	96.56
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.38
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.12
COG2962	293	RarD Predicted permeases [General function predict	96.0
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.85
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.83
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.76
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.66
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	95.51
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.02
PRK13499	345	rhamnose-proton symporter; Provisional	94.62
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	94.28
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	94.23
KOG4510	346	consensus Permease of the drug/metabolite transpor	93.04
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	88.18
KOG1581	327	consensus UDP-galactose transporter related protei	87.82
KOG2922	335	consensus Uncharacterized conserved protein [Funct	87.46
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	87.35
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	85.86
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	82.92

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.97  E-value=3.9e-30  Score=246.20  Aligned_cols=181  Identities=38%  Similarity=0.619  Sum_probs=164.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHH
Q 022599          105 YPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCH  182 (294)
Q Consensus       105 ~~~l~~~~~i~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls--~~~~~~llpvgl~~  182 (294)
                      .+.+++..+|++||.+|+.++++||++++.+|+|++++++|++++++++.++|..+.+++++.+  +++++.++|+|+++
T Consensus        45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         45 NFKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999999999999988777876655544453  45889999999999


Q ss_pred             HHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccccccHHHHHHHHHHHH
Q 022599          183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI  262 (294)
Q Consensus       183 ~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~~fn~~G~ilallS~v  262 (294)
                      ...+...|+|+++++++++|++|+++|+|+++++++++|||++++++++++++++||.+++.+|.++|+.|++++++|++
T Consensus       125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~  204 (350)
T PTZ00343        125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNL  204 (350)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHH
Confidence            88888899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcccc-------chhhHHH
Q 022599          263 SFTYRSIYSKKAMVIF-------YETLCCS  285 (294)
Q Consensus       263 ~~al~~V~~Kk~l~~~-------~~~n~~a  285 (294)
                      ++++|+++.||.++++       ++.|.|.
T Consensus       205 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~  234 (350)
T PTZ00343        205 GSSLRSIFAKKTMKNKSEIGENLTASNIYM  234 (350)
T ss_pred             HHHHHHHHHHHHhcccccccccCCHHHHHH
Confidence            9999999999988754       3566665

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=7.1e-30  Score=240.85  Aligned_cols=181  Identities=41%  Similarity=0.602  Sum_probs=167.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-ChHHHHHHHHHHHHH
Q 022599          106 PALVTGFFFFMWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI-DSKLLKLLIPVAVCH  182 (294)
Q Consensus       106 ~~l~~~~~i~~w~~~si~~~i~NK~vL~--~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~l-s~~~~~~llpvgl~~  182 (294)
                      +.+..+.++..||++|++++++||++++  +||||++++++|++++.+..++.+..+..+..+. ++.+++.++|+|++|
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~   93 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF   93 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence            4678899999999999999999999999  8999999999999999999999988887776655 456899999999999


Q ss_pred             HHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccccccHHHHHHHHHHHH
Q 022599          183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI  262 (294)
Q Consensus       183 ~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~~fn~~G~ilallS~v  262 (294)
                      +++++++|.|++++||||+|++|+++|+|++++++++.+|++++.+++++++++.||.+++++|.+||+.|++.++++++
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~  173 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL  173 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhccc----cchhhHHHH
Q 022599          263 SFTYRSIYSKKAMVI----FYETLCCSS  286 (294)
Q Consensus       263 ~~al~~V~~Kk~l~~----~~~~n~~a~  286 (294)
                      .+++|++++|+.+++    .|+.|.+..
T Consensus       174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y  201 (316)
T KOG1441|consen  174 AFALRNILSKKLLTSKGESLNSMNLLYY  201 (316)
T ss_pred             HHHHHHHHHHHhhhccccccCchHHHHH
Confidence            999999999998853    466666543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.96  E-value=8.6e-28  Score=224.10  Aligned_cols=182  Identities=62%  Similarity=1.042  Sum_probs=164.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Q 022599          108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHV  187 (294)
Q Consensus       108 l~~~~~i~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~  187 (294)
                      ++++.++..||.+|+.++++||+++++|++|+++++.|++++.+++.+.|..+.+++++.++++++.++++|++++.++.
T Consensus         1 ~~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   80 (302)
T TIGR00817         1 LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHV   80 (302)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999998877776555555567789999999999999999999


Q ss_pred             HHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccccccHHHHHHHHHHHHHHHHH
Q 022599          188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYR  267 (294)
Q Consensus       188 ~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~~fn~~G~ilallS~v~~al~  267 (294)
                      +.|++++++++++++++++++|+|+++++++++|||++++++++++++++|+.+...+|.++++.|+++++++++++++|
T Consensus        81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~  160 (302)
T TIGR00817        81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR  160 (302)
T ss_pred             HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999988788888999999999999999999


Q ss_pred             HHHHhhhcc--ccch--hhHHHHHhh
Q 022599          268 SIYSKKAMV--IFYE--TLCCSSCKA  289 (294)
Q Consensus       268 ~V~~Kk~l~--~~~~--~n~~a~~l~  289 (294)
                      +++.||.++  ++|+  ...|...+|
T Consensus       161 ~v~~k~~~~~~~~~~~~~~~~~~~~~  186 (302)
T TIGR00817       161 NIFSKKAMTIKSLDKTNLYAYISIMS  186 (302)
T ss_pred             HHHHHHhhccCCCCcccHHHHHHHHH
Confidence            999999888  6666  444444433

specificities overlap.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.84  E-value=7.7e-21  Score=176.42  Aligned_cols=173  Identities=21%  Similarity=0.321  Sum_probs=152.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHH-Hhc--CCC-CCCCChH-HHHHHHHHHHH
Q 022599          107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVG--LPK-RAPIDSK-LLKLLIPVAVC  181 (294)
Q Consensus       107 ~l~~~~~i~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~-~~g--~~~-~~~ls~~-~~~~llpvgl~  181 (294)
                      ...+..++..||++|++..+++|+.-.+|+||++++.+|+++-.++..... ..+  .++ +.+.+|+ +.+...|++++
T Consensus        14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala   93 (349)
T KOG1443|consen   14 RVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA   93 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence            345566779999999999999999999999999999999998887654332 222  111 2345654 67889999999


Q ss_pred             HHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccccccHHHHHHHHHHH
Q 022599          182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN  261 (294)
Q Consensus       182 ~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~~fn~~G~ilallS~  261 (294)
                      .++.+.++|||++|+++|+|++.|+..++|+.+++..|.-|++++...+.+++|.+|+.+.++++.+||..|+.+++++.
T Consensus        94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS  173 (349)
T KOG1443|consen   94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAAS  173 (349)
T ss_pred             hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccccc
Q 022599          262 ISFTYRSIYSKKAMVIFY  279 (294)
Q Consensus       262 v~~al~~V~~Kk~l~~~~  279 (294)
                      ++.++|+.+.|.++++-|
T Consensus       174 ~~sGlRW~~tQ~ll~~~~  191 (349)
T KOG1443|consen  174 LLSGLRWAFTQMLLRNQP  191 (349)
T ss_pred             HhhhhhHHHHHHHHhcCc
Confidence            999999999999887644

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.81  E-value=1.1e-18  Score=163.11  Aligned_cols=179  Identities=21%  Similarity=0.317  Sum_probs=162.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH--HHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 022599          112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSV--IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTS  189 (294)
Q Consensus       112 ~~i~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~--~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~  189 (294)
                      .-.+.|..+|+.+++.||+++++++||..+..  .|++++.+.++++-+.|..+.++++++..|+++|+++++.+.+.++
T Consensus        15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~   94 (314)
T KOG1444|consen   15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTG   94 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHc
Confidence            44566778899999999999999999977777  8999999998888888888888999999999999999999999999


Q ss_pred             HHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccccccHHHHHHHHHHHHHHHHHHH
Q 022599          190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSI  269 (294)
Q Consensus       190 n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~~fn~~G~ilallS~v~~al~~V  269 (294)
                      ..+++|++++++.++|..+|+++++.+.+++|.++++.+|.++..+++|......+|.+||..|+.|++.++++.+.+.+
T Consensus        95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v  174 (314)
T KOG1444|consen   95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVV  174 (314)
T ss_pred             cccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccc--------cchhhHHHHHhhh
Q 022599          270 YSKKAMVI--------FYETLCCSSCKAA  290 (294)
Q Consensus       270 ~~Kk~l~~--------~~~~n~~a~~l~~  290 (294)
                      +.||-.+.        +.+.|++++..+.
T Consensus       175 ~~kk~vd~~~l~~~~lv~yNnl~~L~~l~  203 (314)
T KOG1444|consen  175 YVKKSVDSANLNKFGLVFYNNLLSLPPLL  203 (314)
T ss_pred             HHHHhhccccccceeEEeehhHHHHHHHH
Confidence            99875431        3556776665543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.66  E-value=8.5e-15  Score=137.33  Aligned_cols=170  Identities=19%  Similarity=0.253  Sum_probs=134.6

Q ss_pred             HHHHHHHHHHHHHHhcc--C-CcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhc
Q 022599          118 YFLNVIFNILNKRIYNY--F-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFA  194 (294)
Q Consensus       118 ~~~si~~~i~NK~vL~~--f-p~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~  194 (294)
                      |+.-..+.++++++.+.  . ++|+++++.|+++..+...+......  .++.++..++++++.++++.++.+++|.|++
T Consensus         9 ~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~   86 (303)
T PF08449_consen    9 FGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALK   86 (303)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333445666777664  2 37999999999999887665443222  1233445688899999999999999999999


Q ss_pred             ccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccccccc----cc------HHHHHHHHHHHHHH
Q 022599          195 AVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS----FN------WTGFISAMISNISF  264 (294)
Q Consensus       195 ~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~~----fn------~~G~ilallS~v~~  264 (294)
                      |+|+++.+++|+..|+++++++++++|||+++.++++++++++|+++....|.+    .+      ..|+++.+++.++.
T Consensus        87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~  166 (303)
T PF08449_consen   87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLD  166 (303)
T ss_pred             hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998765421    11      23999999999999


Q ss_pred             HHHHHHHhhhcccc--------chhhHHHHHhh
Q 022599          265 TYRSIYSKKAMVIF--------YETLCCSSCKA  289 (294)
Q Consensus       265 al~~V~~Kk~l~~~--------~~~n~~a~~l~  289 (294)
                      +++.+++||.+++.        .++|+++.++.
T Consensus       167 a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~  199 (303)
T PF08449_consen  167 AFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFL  199 (303)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence            99999999987643        33666655544

; GO: 0055085 transmembrane transport

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.60  E-value=6.4e-16  Score=142.10  Aligned_cols=182  Identities=18%  Similarity=0.248  Sum_probs=155.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcc----CCcHHHHHHHHHHHHHHHHHHHHH--hcC---CCC--CCCChHHHHHHH
Q 022599          108 LVTGFFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCLVSWA--VGL---PKR--APIDSKLLKLLI  176 (294)
Q Consensus       108 l~~~~~i~~w~~~si~~~i~NK~vL~~----fp~Pl~Lt~~q~~~~~lllli~~~--~g~---~~~--~~ls~~~~~~ll  176 (294)
                      .++..-...|+.+++.+.+.||++++.    .+.|++.+++|.++...+|...-.  .+.   ...  -++|.+..+++.
T Consensus        27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vl  106 (347)
T KOG1442|consen   27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVL  106 (347)
T ss_pred             hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhc
Confidence            356677788999999999999999995    568999999999999888765432  111   111  136667788999


Q ss_pred             HHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccccc---ccccHHH
Q 022599          177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTG  253 (294)
Q Consensus       177 pvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e---~~fn~~G  253 (294)
                      |+++.+.+.+.++|.+++|++|+|+++=|+++.+|+++++++++|++.+.....+++++++|..+-+..|   ..++|.|
T Consensus       107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G  186 (347)
T KOG1442|consen  107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG  186 (347)
T ss_pred             chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhh
Confidence            9999999999999999999999999999999999999999999999999999999999999999998877   5678999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccc--------chhhHHHHHhh
Q 022599          254 FISAMISNISFTYRSIYSKKAMVIF--------YETLCCSSCKA  289 (294)
Q Consensus       254 ~ilallS~v~~al~~V~~Kk~l~~~--------~~~n~~a~~l~  289 (294)
                      .++.+.++++-++..++.||.+...        .++|.+++++.
T Consensus       187 vifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLf  230 (347)
T KOG1442|consen  187 VIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLF  230 (347)
T ss_pred             hHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHH
Confidence            9999999999999999999866432        34777777664

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.58  E-value=1.5e-13  Score=128.25  Aligned_cols=154  Identities=13%  Similarity=0.026  Sum_probs=117.6

Q ss_pred             HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcc----cchhHH
Q 022599          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA----VAVSFT  201 (294)
Q Consensus       126 i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~----vsvs~~  201 (294)
                      ...|..++++| |..+.++|+.++.+++....  +.++   ..+++++.++.-++.+...+.+.+.++++    .+.+..
T Consensus        21 ~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a   94 (295)
T PRK11689         21 GLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPR---LRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEV   94 (295)
T ss_pred             HHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cccc---cccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHH
Confidence            66799999998 99999999999988765432  1122   12222333333344455666666666654    577778


Q ss_pred             HHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccc-----------cccHHHHHHHHHHHHHHHHHHHH
Q 022599          202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-----------SFNWTGFISAMISNISFTYRSIY  270 (294)
Q Consensus       202 ~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~-----------~fn~~G~ilallS~v~~al~~V~  270 (294)
                      .++.++.|+|+.+++++++|||+++.+++++++.++|+.+....+.           +.+..|+++++++.++|+.++++
T Consensus        95 ~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~  174 (295)
T PRK11689         95 GMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNV  174 (295)
T ss_pred             HHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999988765432           12356999999999999999999


Q ss_pred             HhhhccccchhhHHH
Q 022599          271 SKKAMVIFYETLCCS  285 (294)
Q Consensus       271 ~Kk~l~~~~~~n~~a  285 (294)
                      .||..+++|+...+.
T Consensus       175 ~k~~~~~~~~~~~~~  189 (295)
T PRK11689        175 TRKYARGKNGITLFF  189 (295)
T ss_pred             HhhccCCCCchhHHH
Confidence            999887777755443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.57  E-value=4.2e-13  Score=125.05  Aligned_cols=162  Identities=17%  Similarity=0.246  Sum_probs=129.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHHHH
Q 022599          110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVT  188 (294)
Q Consensus       110 ~~~~i~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~-~l~~~~  188 (294)
                      +..++.....++..+ +..|..+++.+ |..++.+|++++.+++++....+..+  ..++++++.....|.+. .....+
T Consensus        10 ~~~~~~~~~iWg~~~-~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~   85 (292)
T PRK11272         10 FGALFALYIIWGSTY-LVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGM   85 (292)
T ss_pred             HHHHHHHHHHHhhHH-HHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHH
Confidence            334555555565555 77899999887 99999999999988765544332211  23566788888888764 456777


Q ss_pred             HHHhh-cccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccc-cccccHHHHHHHHHHHHHHHH
Q 022599          189 SNVSF-AAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNISFTY  266 (294)
Q Consensus       189 ~n~sl-~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~-e~~fn~~G~ilallS~v~~al  266 (294)
                      .+++. ++++++...++-++.|+++.+++.+ +|||+++++++++++.++|+.+...+ +.+.+..|..+++++.++|+.
T Consensus        86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~  164 (292)
T PRK11272         86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAF  164 (292)
T ss_pred             HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHH
Confidence            88898 9999999999999999999999986 69999999999999999999887543 445667899999999999999


Q ss_pred             HHHHHhhhcc
Q 022599          267 RSIYSKKAMV  276 (294)
Q Consensus       267 ~~V~~Kk~l~  276 (294)
                      ++++.||..+
T Consensus       165 ~~~~~~~~~~  174 (292)
T PRK11272        165 GSVWSSRLPL  174 (292)
T ss_pred             HHHHHHhcCC
Confidence            9999998754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.57  E-value=1.4e-13  Score=124.49  Aligned_cols=149  Identities=16%  Similarity=0.099  Sum_probs=124.6

Q ss_pred             HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH-HHHHHHHHHHHhhcccchhHHHHH
Q 022599          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAV-CHALGHVTSNVSFAAVAVSFTHTI  204 (294)
Q Consensus       126 i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl-~~~l~~~~~n~sl~~vsvs~~~ii  204 (294)
                      +..|+.+++...|..+...|++++.+++.+....+      .++++++..+..+. .+.++..+.+.++++++++...++
T Consensus         6 ~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii   79 (260)
T TIGR00950         6 VVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL   79 (260)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence            56799988755589998889998888766554433      23445666677765 467788899999999999999999


Q ss_pred             HhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccc-cccccHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 022599          205 KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYE  280 (294)
Q Consensus       205 kal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~-e~~fn~~G~ilallS~v~~al~~V~~Kk~l~~~~~  280 (294)
                      .+++|+++.+++.+++|||++++++.++++.++|+.+.... +.+.+..|+++++++.++++.++++.|+..++.++
T Consensus        80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~  156 (260)
T TIGR00950        80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP  156 (260)
T ss_pred             HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc
Confidence            99999999999999999999999999999999998887543 34566789999999999999999999999877764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.53  E-value=8.4e-13  Score=127.36  Aligned_cols=170  Identities=11%  Similarity=0.026  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHH-hcC-CCCCCCChHHHHHHHHHHHHHHHHHH
Q 022599          110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGL-PKRAPIDSKLLKLLIPVAVCHALGHV  187 (294)
Q Consensus       110 ~~~~i~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~-~g~-~~~~~ls~~~~~~llpvgl~~~l~~~  187 (294)
                      ....+++ =....++.++.|..++.--.|..+.++|+.++.+++++... .+. ++.++.+++++..+..++++..+...
T Consensus        15 ~~~~~~~-q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~   93 (358)
T PLN00411         15 LTAMLAT-ETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVI   93 (358)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHH
Confidence            3344444 23445556778999987334888999999999887654432 222 22234467788888888887755667


Q ss_pred             HHHHhhcccchhHHHHHHhhhhHHHHHHHHHH------hcccCChhhHHHHhHhhhhheecccc-cc-------------
Q 022599          188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFI------LGQQLPLTLWLSLAPVVIGVSMASLT-EL-------------  247 (294)
Q Consensus       188 ~~n~sl~~vsvs~~~iikal~Pvft~lls~l~------lgek~s~~~~lsllliv~GV~la~~~-e~-------------  247 (294)
                      +.+++++|++++...++-+++|+|++++++++      ++||+++.+++++++.++|+.+.... +.             
T Consensus        94 ~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~  173 (358)
T PLN00411         94 TGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNF  173 (358)
T ss_pred             HHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccc
Confidence            89999999999999999999999999999999      69999999999999999999875531 11             


Q ss_pred             ----------ccc-HHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 022599          248 ----------SFN-WTGFISAMISNISFTYRSIYSKKAMVIFYE  280 (294)
Q Consensus       248 ----------~fn-~~G~ilallS~v~~al~~V~~Kk~l~~~~~  280 (294)
                                ..+ ..|..+++++.++|+++++++|+..+++++
T Consensus       174 ~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~  217 (358)
T PLN00411        174 RQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA  217 (358)
T ss_pred             cccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence                      112 459999999999999999999998877655

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.44  E-value=6.7e-12  Score=120.01  Aligned_cols=158  Identities=11%  Similarity=0.069  Sum_probs=122.0

Q ss_pred             HHHHHHHHHhcc-CCcHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Q 022599          123 IFNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLP--KRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS  199 (294)
Q Consensus       123 ~~~i~NK~vL~~-fp~Pl~Lt~~q~~~~~lllli~~~~g~~--~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs  199 (294)
                      +.+..+.++-++ +..|.+-+.+.++.-.++.......+..  +..+.-+++|++.+.++++...++++.+.|++|++++
T Consensus        27 ~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvt  106 (334)
T PF06027_consen   27 GTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVT  106 (334)
T ss_pred             hHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHh
Confidence            334445555443 6678888877665544432222222211  1112334567778888999999999999999999999


Q ss_pred             HHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccc---------cccHHHHHHHHHHHHHHHHHHHH
Q 022599          200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNISFTYRSIY  270 (294)
Q Consensus       200 ~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~---------~fn~~G~ilallS~v~~al~~V~  270 (294)
                      -.|++.++.-+|+++++++++++|+++.+++++++.++|+.+....|.         +-...|.++++++++.+++++|+
T Consensus       107 S~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~  186 (334)
T PF06027_consen  107 SVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVL  186 (334)
T ss_pred             HHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999988765542         12379999999999999999999


Q ss_pred             Hhhhccccch
Q 022599          271 SKKAMVIFYE  280 (294)
Q Consensus       271 ~Kk~l~~~~~  280 (294)
                      .|+..++.+.
T Consensus       187 ~E~~v~~~~~  196 (334)
T PF06027_consen  187 EEKLVKKAPR  196 (334)
T ss_pred             HHHhcccCCH
Confidence            9998887655

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00688 rarD rarD protein

Probab=99.43  E-value=1.6e-11  Score=111.90  Aligned_cols=145  Identities=12%  Similarity=0.058  Sum_probs=110.5

Q ss_pred             HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHH-HhcCCCC-----CCCChHH-HHHHHHHHHHHHHHHHHHHHhhcccch
Q 022599          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKR-----APIDSKL-LKLLIPVAVCHALGHVTSNVSFAAVAV  198 (294)
Q Consensus       126 i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~-~~g~~~~-----~~ls~~~-~~~llpvgl~~~l~~~~~n~sl~~vsv  198 (294)
                      +..|+ +.+.+ |..+.++|++++.+.+++.. ..+.++.     .+.++++ +..+...+++..++..+..++++++++
T Consensus        19 ~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~   96 (256)
T TIGR00688        19 YYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSS   96 (256)
T ss_pred             HHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence            44687 45676 99999999999987655433 2221110     0112222 334555667777888999999999999


Q ss_pred             hHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccccccHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 022599          199 SFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMV  276 (294)
Q Consensus       199 s~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~~fn~~G~ilallS~v~~al~~V~~Kk~l~  276 (294)
                      +...++..++|+|+++++.+++|||+++++++++++.++|+.+....+.+.+    .+++++.++++.|.+..|+..+
T Consensus        97 ~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~  170 (256)
T TIGR00688        97 LEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKN  170 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCC
Confidence            9999999999999999999999999999999999999999987754322222    3578899999999999998753

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.42  E-value=1.7e-11  Score=114.52  Aligned_cols=145  Identities=17%  Similarity=0.138  Sum_probs=108.3

Q ss_pred             HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCC---C-CChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 022599          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA---P-IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT  201 (294)
Q Consensus       126 i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~---~-ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~  201 (294)
                      ++.|.. .++| |..+.++|++++.+.+...+..+.+.+.   + .+++++.....-++....++.+.+++++++|++..
T Consensus        25 ~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a  102 (296)
T PRK15430         25 AYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA  102 (296)
T ss_pred             HHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence            344875 5677 9999999999998765444322111100   0 12333332232234566788999999999999999


Q ss_pred             HHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccccccHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 022599          202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMV  276 (294)
Q Consensus       202 ~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~~fn~~G~ilallS~v~~al~~V~~Kk~l~  276 (294)
                      .++..+.|+++++++++++|||+++++++++++.++|+.+....+.+..    .+.+++.++|++|.++.|+...
T Consensus       103 ~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~r~~~~  173 (296)
T PRK15430        103 SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFYGLVRKKIAV  173 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999988754322222    4677889999999999998754

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.42  E-value=1.9e-11  Score=114.31  Aligned_cols=144  Identities=16%  Similarity=0.249  Sum_probs=111.2

Q ss_pred             HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHhhcc-cchhHHHH
Q 022599          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAA-VAVSFTHT  203 (294)
Q Consensus       126 i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~-l~~~~~n~sl~~-vsvs~~~i  203 (294)
                      ...|..+++++ |..+.++|++++.+.+.+... + +   +.+   ++.++..+++.. ....+...++++ ++.+...+
T Consensus        21 ~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~-~-~---~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~   91 (299)
T PRK11453         21 VVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA-R-P---KVP---LNLLLGYGLTISFGQFAFLFCAINFGMPAGLASL   91 (299)
T ss_pred             HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc-C-C---CCc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence            55699998887 999999999987765443321 1 1   112   333445555433 334456678887 78999999


Q ss_pred             HHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccccc---ccccHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 022599          204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNISFTYRSIYSKKAMVIF  278 (294)
Q Consensus       204 ikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e---~~fn~~G~ilallS~v~~al~~V~~Kk~l~~~  278 (294)
                      +-+++|+++.+++++++|||++.++++++++.++|+.+....+   .+.++.|+.+++++.++|+.+++++||..++.
T Consensus        92 l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~  169 (299)
T PRK11453         92 VLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHS  169 (299)
T ss_pred             HHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999998876432   23456899999999999999999999976543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.41  E-value=3.1e-11  Score=112.62  Aligned_cols=145  Identities=12%  Similarity=0.040  Sum_probs=113.9

Q ss_pred             HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHH
Q 022599          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK  205 (294)
Q Consensus       126 i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iik  205 (294)
                      ...|+.++++| |..+.++|++++.+++.+....+ +  .+.++++++..+..|++......+.+++++++|++...++.
T Consensus        29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~  104 (293)
T PRK10532         29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKPW-R--LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE  104 (293)
T ss_pred             HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHH-h--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            45899999998 99999999999998776554321 1  13456778888888887777778889999999999999999


Q ss_pred             hhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccc---cccccHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 022599          206 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---ELSFNWTGFISAMISNISFTYRSIYSKKAMVIFYE  280 (294)
Q Consensus       206 al~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~---e~~fn~~G~ilallS~v~~al~~V~~Kk~l~~~~~  280 (294)
                      .+.|+++++++.    |++...  ..+.+.++|+.+....   ..+.+..|.++++++.++++.|.++.||..++.++
T Consensus       105 ~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~  176 (293)
T PRK10532        105 FTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHGP  176 (293)
T ss_pred             HHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence            999999988763    555443  4456678998776421   22346789999999999999999999998777666

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.28  E-value=4.2e-11  Score=95.41  Aligned_cols=118  Identities=16%  Similarity=0.311  Sum_probs=98.0

Q ss_pred             HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHH-HhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHH
Q 022599          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFT  201 (294)
Q Consensus       124 ~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~-~~g~~~~~~ls~~~~~~llpvgl~-~~l~~~~~n~sl~~vsvs~~  201 (294)
                      +.+++|+..++++ |...+.+|+.++.+ +.+.. ..+..+..+.+.+++...+..+++ ..+++.+.+.++++.+++..
T Consensus         6 ~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   83 (126)
T PF00892_consen    6 YSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV   83 (126)
T ss_pred             HHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence            3477899999987 99999999999997 43332 222222245567777778888876 57889999999999999999


Q ss_pred             HHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       202 ~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      +++..++|+++.++++++++|++++.++++++++++|+.+..
T Consensus        84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.27  E-value=2.7e-10  Score=105.52  Aligned_cols=153  Identities=16%  Similarity=0.178  Sum_probs=111.0

Q ss_pred             HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 022599          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT  201 (294)
Q Consensus       124 ~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g--~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~  201 (294)
                      .++.+|...++-+ +..  ...+..+.+++......+  ..+.++.+++.+..++..++....++.+.+.++++.+++..
T Consensus        16 ~~~~~k~~~~~~~-~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   92 (281)
T TIGR03340        16 WNLMAKSHADKEP-DFL--WWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLV   92 (281)
T ss_pred             HHHHHhhcCCchh-HHH--HHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence            3466787777632 432  334444444443333222  12222233444444444456677888899999999999999


Q ss_pred             HHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccccc-ccccHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 022599          202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-LSFNWTGFISAMISNISFTYRSIYSKKAMVIFY  279 (294)
Q Consensus       202 ~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e-~~fn~~G~ilallS~v~~al~~V~~Kk~l~~~~  279 (294)
                      .++..+.|+++++++++++||++++.++++++++++|+.+....+ .+.+..|+.+++++.++++.|+++.|+..++.+
T Consensus        93 ~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~  171 (281)
T TIGR03340        93 YPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVP  171 (281)
T ss_pred             hhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchh
Confidence            999999999999999999999999999999999999998876433 234567888999999999999999998755443

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.20  E-value=4.6e-09  Score=94.99  Aligned_cols=153  Identities=18%  Similarity=0.179  Sum_probs=111.5

Q ss_pred             HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH-HHHHHHHHHHHHhhcccchhHHHHH
Q 022599          126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVA-VCHALGHVTSNVSFAAVAVSFTHTI  204 (294)
Q Consensus       126 i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvg-l~~~l~~~~~n~sl~~vsvs~~~ii  204 (294)
                      ...|....+...+......+++++.+........+.....+..+ +++.....+ +.......+.+.++++++++.++++
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  102 (292)
T COG0697          24 IALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALR-PWLLLLLLALLGLALPFLLLFLALKYTSASVASLI  102 (292)
T ss_pred             HHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhccccccccc-chHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Confidence            44466666533255555558888777633232222111111111 233344444 5566778889999999999999999


Q ss_pred             HhhhhHHHHHHHH-HHhcccCChhhHHHHhHhhhhheeccccccccc---HHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 022599          205 KALEPFFNAAASQ-FILGQQLPLTLWLSLAPVVIGVSMASLTELSFN---WTGFISAMISNISFTYRSIYSKKAMVIFYE  280 (294)
Q Consensus       205 kal~Pvft~lls~-l~lgek~s~~~~lsllliv~GV~la~~~e~~fn---~~G~ilallS~v~~al~~V~~Kk~l~~~~~  280 (294)
                      .++.|+++.+++. ++++||+++.++.+++.++.|+.++...+...+   ..|..+++++.+++++++++.|+.. +.+.
T Consensus       103 ~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~  181 (292)
T COG0697         103 IGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-RLGP  181 (292)
T ss_pred             HHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCh
Confidence            9999999999997 777999999999999999999999987655433   5899999999999999999999887 4444

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.19  E-value=5.5e-11  Score=107.13  Aligned_cols=156  Identities=19%  Similarity=0.220  Sum_probs=132.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhcc--CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 022599          114 FFMWYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNV  191 (294)
Q Consensus       114 i~~w~~~si~~~i~NK~vL~~--fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~  191 (294)
                      ++.|++.++.+++.||++++.  |+.-..+.+.|-+++.+.+.++...|..+.+   .++.+.++|++++-...++.+.-
T Consensus        11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~SK   87 (309)
T COG5070          11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTSSK   87 (309)
T ss_pred             HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhccc
Confidence            456778999999999999996  7666777788999888877666555544322   34577889999999888999999


Q ss_pred             hhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccc--------cccHHHHHHHHHHHHH
Q 022599          192 SFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNIS  263 (294)
Q Consensus       192 sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~--------~fn~~G~ilallS~v~  263 (294)
                      +++|.+++.+++.|.++.+.++..+.+++|.+.+-....+.++++..-..+.++|.        .+| -|+.|+...+++
T Consensus        88 sLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncls  166 (309)
T COG5070          88 SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLS  166 (309)
T ss_pred             ceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHh
Confidence            99999999999999999999999999999999999999999999998888888876        455 599999999999


Q ss_pred             HHHHHHHHhh
Q 022599          264 FTYRSIYSKK  273 (294)
Q Consensus       264 ~al~~V~~Kk  273 (294)
                      .+.+-...||
T Consensus       167 saafVL~mrk  176 (309)
T COG5070         167 SAAFVLIMRK  176 (309)
T ss_pred             HHHHHHHHHH
Confidence            9988877665

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.07  E-value=2.3e-09  Score=98.49  Aligned_cols=111  Identities=20%  Similarity=0.220  Sum_probs=98.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccc-
Q 022599          169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-  247 (294)
Q Consensus       169 ~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~-  247 (294)
                      +++..+....+++|++.+.+...++++++.+.+|+++.+..++|++++++++|+|++..+|+++++.++|+.+...++. 
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            4456677788899999999999999999999999999999999999999999999999999999999999999854221 


Q ss_pred             --------c--------ccHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 022599          248 --------S--------FNWTGFISAMISNISFTYRSIYSKKAMVIFY  279 (294)
Q Consensus       248 --------~--------fn~~G~ilallS~v~~al~~V~~Kk~l~~~~  279 (294)
                              +        -...|+...+++.++.++..||.+|.+++.+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~  141 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN  141 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence                    1        1258999999999999999999999988753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.88  E-value=1.1e-07  Score=89.08  Aligned_cols=182  Identities=13%  Similarity=0.080  Sum_probs=139.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhc--------cCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q 022599          107 ALVTGFFFFMWYFLNVIFNILNKRIYN--------YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV  178 (294)
Q Consensus       107 ~l~~~~~i~~w~~~si~~~i~NK~vL~--------~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpv  178 (294)
                      .++..+.+..-|+.-+.+.++...+..        +|.+|.++..+|-+.+.++...+.. ..++ +....+.|.+...+
T Consensus        12 ~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~-~~k~-~~~~~apl~~y~~i   89 (327)
T KOG1581|consen   12 IILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK-WWKK-ELSGVAPLYKYSLI   89 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh-cccc-cCCCCCchhHHhHH
Confidence            344444444445555555566655544        2788999999999988887644332 1122 22234467788889


Q ss_pred             HHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccccc---------ccc
Q 022599          179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---------LSF  249 (294)
Q Consensus       179 gl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e---------~~f  249 (294)
                      ++.+.++-.++..|++|++-+...+.|+.--+-+++...++.++|++..++++.+++..||.+....+         .+.
T Consensus        90 s~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~n  169 (327)
T KOG1581|consen   90 SFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGREN  169 (327)
T ss_pred             HHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCC
Confidence            99999999999999999999988888999988889999999999999999999999999999876432         124


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhccc--------cchhhHHHHHhhh
Q 022599          250 NWTGFISAMISNISFTYRSIYSKKAMVI--------FYETLCCSSCKAA  290 (294)
Q Consensus       250 n~~G~ilallS~v~~al~~V~~Kk~l~~--------~~~~n~~a~~l~~  290 (294)
                      +.+|+.++..+.+..++-|..++++.++        |.+.|+|..++-+
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~  218 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNG  218 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHH
Confidence            5899999999999999999999887653        4568888776543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.85  E-value=7.4e-09  Score=94.19  Aligned_cols=152  Identities=14%  Similarity=0.126  Sum_probs=119.9

Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHH
Q 022599          135 FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAA  214 (294)
Q Consensus       135 fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~l  214 (294)
                      |.|.+.+.++|..+..++.-++...  +++.++|...-+....+++.|.+.++.+|.++|++|-+...+-|+.-|+-+++
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~i--r~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi  127 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFLI--RKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI  127 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhheee--cccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence            7788999999999988876544332  23334454444556788889999999999999999999777779999999999


Q ss_pred             HHHHHhcccCChhhHHHHhHhhhhheecccccc-------cccHHHHHHHHHHHHHHHHHHHHHhhhc--------cccc
Q 022599          215 ASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------SFNWTGFISAMISNISFTYRSIYSKKAM--------VIFY  279 (294)
Q Consensus       215 ls~l~lgek~s~~~~lsllliv~GV~la~~~e~-------~fn~~G~ilallS~v~~al~~V~~Kk~l--------~~~~  279 (294)
                      +++++.+++++|++++++++|+.||++..+.|.       .--..|=++.++|.-..++....+.+.-        +.|.
T Consensus       128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~  207 (337)
T KOG1580|consen  128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMF  207 (337)
T ss_pred             eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHH
Confidence            999999999999999999999999999987642       1124688888888888888777765532        2367


Q ss_pred             hhhHHHHHh
Q 022599          280 ETLCCSSCK  288 (294)
Q Consensus       280 ~~n~~a~~l  288 (294)
                      ++|+|+.+.
T Consensus       208 ~~NlwStL~  216 (337)
T KOG1580|consen  208 YTNLWSTLY  216 (337)
T ss_pred             HHHHHHHHH
Confidence            799997654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=98.85  E-value=2.6e-08  Score=95.62  Aligned_cols=117  Identities=15%  Similarity=0.148  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccc-------
Q 022599          175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------  247 (294)
Q Consensus       175 llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~-------  247 (294)
                      -+.++.+..+.+.++|.|+.+.+|+..+++.++.-+||..++.++.+||+++.+.+++++.++||++++.+|.       
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~  241 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLP  241 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCC
Confidence            3344455667889999999999999999999999999999999999999999999999999999999987632       


Q ss_pred             -cccHHHHHHHHHHHHHHHHHHHHHhhhccccc---hhhHHHHHhhhc
Q 022599          248 -SFNWTGFISAMISNISFTYRSIYSKKAMVIFY---ETLCCSSCKAAA  291 (294)
Q Consensus       248 -~fn~~G~ilallS~v~~al~~V~~Kk~l~~~~---~~n~~a~~l~~~  291 (294)
                       +-...|.+++++|++.|+.|.++.||-..+.+   .++.+....|.-
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLf  289 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLF  289 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHH
Confidence             23379999999999999999999999877664   277776666643

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.82  E-value=1.9e-08  Score=81.21  Aligned_cols=105  Identities=19%  Similarity=0.302  Sum_probs=78.3

Q ss_pred             HHHHHHHHHHHHHHH-HhcCC-CC-CCCChHHHHHHHHHHHHHH-HHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHH
Q 022599          143 VIHLLVGVVYCLVSW-AVGLP-KR-APIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF  218 (294)
Q Consensus       143 ~~q~~~~~lllli~~-~~g~~-~~-~~ls~~~~~~llpvgl~~~-l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l  218 (294)
                      .+|++++.+.+.... ..+.. +. +...++.+..++..+++.. .+..+.++++++.+ +....+.+++|+|+++++.+
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            356676666554332 22211 10 1122234555566676654 78899999999999 58889999999999999999


Q ss_pred             HhcccCChhhHHHHhHhhhhheeccccccc
Q 022599          219 ILGQQLPLTLWLSLAPVVIGVSMASLTELS  248 (294)
Q Consensus       219 ~lgek~s~~~~lsllliv~GV~la~~~e~~  248 (294)
                      ++|||++++++.+++++++|+++..++|.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999877654

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.78  E-value=8.6e-08  Score=79.69  Aligned_cols=119  Identities=21%  Similarity=0.281  Sum_probs=99.0

Q ss_pred             HHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHH-HhcCCCC-CCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 022599          125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKR-APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH  202 (294)
Q Consensus       125 ~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~-~~g~~~~-~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~  202 (294)
                      .++.|..+++.+ |.+-+.+|-.+...++.... ..|..+. -.++++.|..++.-|+...++..++..+++...+|-..
T Consensus        19 ~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~Vv   97 (140)
T COG2510          19 PIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVV   97 (140)
T ss_pred             HHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEE
Confidence            377899999886 99999999998887665443 3332221 13577777777777788888899999999999999999


Q ss_pred             HHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       203 iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      -+..+.|+++++++.+|+||+++.++|++++++++|+.+.+.
T Consensus        98 Pldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          98 PLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             EcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999988753

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.75  E-value=6e-07  Score=84.13  Aligned_cols=142  Identities=20%  Similarity=0.206  Sum_probs=104.2

Q ss_pred             HHHHhccCCcHHHHHHHHHHHHHHHHHHHH-HhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHh
Q 022599          128 NKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKA  206 (294)
Q Consensus       128 NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~-~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iika  206 (294)
                      .|++. .++.++..   ++.++.++..+.. ..+.++  ..+++.+..-+.-|++...++.+...+++++.++....+-+
T Consensus        20 ~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~   93 (290)
T TIGR00776        20 NVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPIST   93 (290)
T ss_pred             HhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHH
Confidence            35554 45534443   5666666544322 222221  11233344444455668888999999999999999988877


Q ss_pred             -hhhHHHHHHHHHHhcccCChhh----HHHHhHhhhhheeccccccc-------cc-HHHHHHHHHHHHHHHHHHHHHhh
Q 022599          207 -LEPFFNAAASQFILGQQLPLTL----WLSLAPVVIGVSMASLTELS-------FN-WTGFISAMISNISFTYRSIYSKK  273 (294)
Q Consensus       207 -l~Pvft~lls~l~lgek~s~~~----~lsllliv~GV~la~~~e~~-------fn-~~G~ilallS~v~~al~~V~~Kk  273 (294)
                       +.|++..+.+.+++||+.+.++    +++++++++|+.+....+.+       .| ..|+++++++.+++++|.+..|+
T Consensus        94 ~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~  173 (290)
T TIGR00776        94 GFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKA  173 (290)
T ss_pred             HHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence             7888999999999999999999    99999999999997643211       44 68999999999999999999997


Q ss_pred             hc
Q 022599          274 AM  275 (294)
Q Consensus       274 ~l  275 (294)
                      ..
T Consensus       174 ~~  175 (290)
T TIGR00776       174 FG  175 (290)
T ss_pred             cC
Confidence            63

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.68  E-value=1.2e-06  Score=79.13  Aligned_cols=116  Identities=21%  Similarity=0.115  Sum_probs=89.7

Q ss_pred             HHHHHHHHhccCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHhhcccchhHH
Q 022599          124 FNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVSFT  201 (294)
Q Consensus       124 ~~i~NK~vL~~fp-~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~-~l~~~~~n~sl~~vsvs~~  201 (294)
                      +.++.|+..++.+ .+..+..+++.++.+++.+......++ ...+.+++..++..+++. .++..+.+.++++.+++..
T Consensus       143 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  221 (260)
T TIGR00950       143 GTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA  221 (260)
T ss_pred             HHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence            3466888887654 244555578888887665443322122 233566676677777654 6788999999999999999


Q ss_pred             HHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhhe
Q 022599          202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS  240 (294)
Q Consensus       202 ~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~  240 (294)
                      .++..++|++++++++++++|+++..++.+..+++.|+.
T Consensus       222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999863

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.64  E-value=8.2e-08  Score=88.98  Aligned_cols=186  Identities=15%  Similarity=0.155  Sum_probs=139.8

Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--C-CcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q 022599          101 FFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNY--F-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIP  177 (294)
Q Consensus       101 ~~~~~~~l~~~~~i~~w~~~si~~~i~NK~vL~~--f-p~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llp  177 (294)
                      ..+|+|..|....+...++.-+.+.+...++++.  | ||-|.++..|+++=+.+.++-.. ....+++  ...||....
T Consensus        35 ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~-~~~~k~r--~iP~rtY~~  111 (367)
T KOG1582|consen   35 LSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ-LIQTKRR--VIPWRTYVI  111 (367)
T ss_pred             cccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE-eecccce--ecchhHhhh
Confidence            4455555666666666677777777888888885  6 48899999999876554333211 1111111  124777888


Q ss_pred             HHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccccc----ccccHHH
Q 022599          178 VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----LSFNWTG  253 (294)
Q Consensus       178 vgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e----~~fn~~G  253 (294)
                      ++.+....+.++|-|+.|.+-+.-.+.|++--+-+++.+.++-|+|+++..+.+..+++.|.++...-|    .+||..|
T Consensus       112 la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~G  191 (367)
T KOG1582|consen  112 LAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIG  191 (367)
T ss_pred             hHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceee
Confidence            888888889999999999999977778998877778899999999999999999999999999876544    5789999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccccch----hhHHHHHhh
Q 022599          254 FISAMISNISFTYRSIYSKKAMVIFYE----TLCCSSCKA  289 (294)
Q Consensus       254 ~ilallS~v~~al~~V~~Kk~l~~~~~----~n~~a~~l~  289 (294)
                      +++.-.+.++.++-.=.++|.|+..+.    +.+|+..+|
T Consensus       192 v~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG  231 (367)
T KOG1582|consen  192 VMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIG  231 (367)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeeccc
Confidence            999999999999877777777764322    555554443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.48  E-value=4.7e-06  Score=80.66  Aligned_cols=120  Identities=14%  Similarity=0.138  Sum_probs=88.2

Q ss_pred             HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHh-c-CCCC---CCCChHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 022599          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-G-LPKR---APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAV  198 (294)
Q Consensus       124 ~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~-g-~~~~---~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsv  198 (294)
                      +++..|.....+|.+...++++++++.+.+.+.... . ....   ...+...+ .++..+++..+.+++.|+++++++.
T Consensus       204 ~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga  282 (358)
T PLN00411        204 SFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGP  282 (358)
T ss_pred             HHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHH-HHHHHHHHHHHHHHHHHHHHhccCc
Confidence            346677777778766677888888887765433221 1 1110   01122222 2333444445677889999999999


Q ss_pred             hHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          199 SFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       199 s~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      +.+.+...++|+|.++++++++||++++.++++.++++.|+.++..
T Consensus       283 ~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        283 LYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             hHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999998764

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.46  E-value=3.5e-06  Score=78.63  Aligned_cols=157  Identities=17%  Similarity=0.274  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHhc-------cCCcHHHHHHHHHHHHHHHHHHHHH-hc-CCCCC-------CC-ChH----HHHHHHHHH
Q 022599          121 NVIFNILNKRIYN-------YFPYPYFVSVIHLLVGVVYCLVSWA-VG-LPKRA-------PI-DSK----LLKLLIPVA  179 (294)
Q Consensus       121 si~~~i~NK~vL~-------~fp~Pl~Lt~~q~~~~~lllli~~~-~g-~~~~~-------~l-s~~----~~~~llpvg  179 (294)
                      ++.-++..||.-+       .|.+|...+ .-|+.|-..|+.... .+ ....+       .+ +++    .....+|.+
T Consensus        15 Gs~Ntl~aKwadsi~~eg~pgfqhpvlqa-l~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pa   93 (372)
T KOG3912|consen   15 GSFNTLVAKWADSIQAEGSPGFQHPVLQA-LLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPA   93 (372)
T ss_pred             ccHHHHHHHHHHhhhhhCCCccccHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChH
Confidence            3334467788755       177887765 456666655543221 11 11111       11 111    133466788


Q ss_pred             HHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccc----------cc
Q 022599          180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----------SF  249 (294)
Q Consensus       180 l~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~----------~f  249 (294)
                      +|-..+...-+.++.+.+.|-+|++|....+|+-+++.-+++++++.++|+++..+++|++++...|.          +-
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~  173 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSS  173 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccccc
Confidence            99998888899999999999999999999999999999999999999999999999999988765432          22


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 022599          250 NWTGFISAMISNISFTYRSIYSKKAMVIF  278 (294)
Q Consensus       250 n~~G~ilallS~v~~al~~V~~Kk~l~~~  278 (294)
                      -..|..+.+++.+.-+.+.++.+|.++..
T Consensus       174 iitGdllIiiaqiivaiQ~v~Eek~l~~~  202 (372)
T KOG3912|consen  174 IITGDLLIIIAQIIVAIQMVCEEKQLKKS  202 (372)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhhhc
Confidence            26899999999999999999998877654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.43  E-value=1e-05  Score=75.56  Aligned_cols=117  Identities=21%  Similarity=0.263  Sum_probs=86.6

Q ss_pred             HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHhhcccchhHHH
Q 022599          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVSFTH  202 (294)
Q Consensus       124 ~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~-~l~~~~~n~sl~~vsvs~~~  202 (294)
                      +++..|+..++.+ |.... ++++++.+.+......... ....+...+...+.++++. .+++.+.|+++++++.+...
T Consensus       163 ~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as  239 (293)
T PRK10532        163 YILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG  239 (293)
T ss_pred             HHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence            3466788776655 66654 5556555554433322111 1123445555556677654 56788999999999999999


Q ss_pred             HHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       203 iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      ++-.++|++.++++++++||+++..++++..++++|++...
T Consensus       240 ~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        240 TLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999988764

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.39  E-value=1e-05  Score=75.43  Aligned_cols=120  Identities=17%  Similarity=0.166  Sum_probs=90.9

Q ss_pred             HHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHH-HhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHHH
Q 022599          125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFTH  202 (294)
Q Consensus       125 ~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~-~~g~~~~~~ls~~~~~~llpvgl~-~~l~~~~~n~sl~~vsvs~~~  202 (294)
                      ++.+|+.-.  +++...+.+|+.++.+.+.+.. ..+.......+.+.|..++..+++ ..+++.+.+.++++++.+...
T Consensus       166 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s  243 (292)
T PRK11272        166 SVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT  243 (292)
T ss_pred             HHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence            355676543  2356667789988887655433 222111111245567777777765 457788999999999999999


Q ss_pred             HHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccccc
Q 022599          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE  246 (294)
Q Consensus       203 iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e  246 (294)
                      ++..++|++.++++++++||+++..++++.++++.|+.+....+
T Consensus       244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998876543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.39  E-value=9.1e-06  Score=75.95  Aligned_cols=116  Identities=16%  Similarity=0.209  Sum_probs=84.1

Q ss_pred             HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 022599          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH  202 (294)
Q Consensus       124 ~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli-~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~  202 (294)
                      +++++|+.-++.+ |....  +.. +.+.+.+ ....+.. ....+.+.|..++..++...+++.+.++++++.+++...
T Consensus       171 ~~v~~k~~~~~~~-~~~~~--~~~-~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s  245 (295)
T PRK11689        171 YCNVTRKYARGKN-GITLF--FIL-TALALWIKYFLSPQP-AMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLA  245 (295)
T ss_pred             HHHHHhhccCCCC-chhHH--HHH-HHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence            4566788765543 65442  222 2332222 2222211 123455666666666666667889999999999999999


Q ss_pred             HHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       203 iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      ++-.++|++.++++++++||+++..+++++++++.|+.+...
T Consensus       246 ~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        246 TASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999877643

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.35  E-value=2.9e-05  Score=74.34  Aligned_cols=120  Identities=15%  Similarity=0.144  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccc-----
Q 022599          171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-----  245 (294)
Q Consensus       171 ~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~-----  245 (294)
                      +..++...+++|++.+-+...++.+.+.+.+|+.-.+-.+.|++++++++++|.++.+|.++++...|+.+....     
T Consensus        91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~  170 (345)
T KOG2234|consen   91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT  170 (345)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            455677778899998889999999999999999999999999999999999999999999999999999998621     


Q ss_pred             -----c-ccccHHHHHHHHHHHHHHHHHHHHHhhhccccch----hhHHHHHhhh
Q 022599          246 -----E-LSFNWTGFISAMISNISFTYRSIYSKKAMVIFYE----TLCCSSCKAA  290 (294)
Q Consensus       246 -----e-~~fn~~G~ilallS~v~~al~~V~~Kk~l~~~~~----~n~~a~~l~~  290 (294)
                           + .+-.+.|+...+.++++.++-.+|.+|.+++-..    .|.....+|+
T Consensus       171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~  225 (345)
T KOG2234|consen  171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGI  225 (345)
T ss_pred             CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence                 1 1224789999999999999999999998875322    5555544443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.17  E-value=4.7e-05  Score=61.86  Aligned_cols=64  Identities=16%  Similarity=0.243  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       180 l~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      +++.....+...+++.+|++....+-++.++++++++++++||++++.+++++.++++|+.+..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3466778889999999999999999999999999999999999999999999999999998764

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.15  E-value=1.4e-06  Score=80.73  Aligned_cols=167  Identities=16%  Similarity=0.115  Sum_probs=106.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCChHHHHHHHHHHHHHHH
Q 022599          106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKR-APIDSKLLKLLIPVAVCHAL  184 (294)
Q Consensus       106 ~~l~~~~~i~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~-~~ls~~~~~~llpvgl~~~l  184 (294)
                      ++.......+- |+.|..+.+..|.+.+   .|..+...++++-.+....+.+...... -+-..|.|  ++.=|++...
T Consensus        36 p~~gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~--LiLRg~mG~t  109 (346)
T KOG4510|consen   36 PNLGLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKW--LILRGFMGFT  109 (346)
T ss_pred             CccCceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEE--EEeehhhhhh
Confidence            44444444444 6666666455554443   4777777775544443333222111100 01111111  2333667777


Q ss_pred             HHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc-----cc---------cccc
Q 022599          185 GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL-----TE---------LSFN  250 (294)
Q Consensus       185 ~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~-----~e---------~~fn  250 (294)
                      +.....+|++|.|.+=+.+|..++|+|+.++++.++||+++...-++..+.+.||+++..     +|         .+-+
T Consensus       110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~  189 (346)
T KOG4510|consen  110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYD  189 (346)
T ss_pred             HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccccc
Confidence            788888999999999999999999999999999999999999999999999999999863     21         1233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 022599          251 WTGFISAMISNISFTYRSIYSKKAMVIF  278 (294)
Q Consensus       251 ~~G~ilallS~v~~al~~V~~Kk~l~~~  278 (294)
                      ..|...++.+.+.-+.--+..++.-++.
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iGk~~  217 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIGKNA  217 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhhccc
Confidence            5677777776666555445455443443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.14  E-value=0.0001  Score=68.96  Aligned_cols=121  Identities=17%  Similarity=0.195  Sum_probs=87.3

Q ss_pred             HHHHHHHHhccCCcH--HHHHHHHHHHHHHHHHHH-HHhcCCC-----CCCCChHHHHHHHHHHHHH-HHHHHHHHHhhc
Q 022599          124 FNILNKRIYNYFPYP--YFVSVIHLLVGVVYCLVS-WAVGLPK-----RAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFA  194 (294)
Q Consensus       124 ~~i~NK~vL~~fp~P--l~Lt~~q~~~~~lllli~-~~~g~~~-----~~~ls~~~~~~llpvgl~~-~l~~~~~n~sl~  194 (294)
                      ++++.|+..++.+.|  .....++++++.+..... +..+.+.     ....+.+.|..++.++++. .+++.+.+.+++
T Consensus       158 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~  237 (299)
T PRK11453        158 GNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLG  237 (299)
T ss_pred             HHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            346677776555433  344455665555433221 2211111     1134566777777888654 467889999999


Q ss_pred             ccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          195 AVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       195 ~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      +.+.+...++..++|++..+++++++||+++..++++..++++|+.+...
T Consensus       238 ~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        238 RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999987654

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.12  E-value=8.3e-05  Score=68.63  Aligned_cols=141  Identities=15%  Similarity=0.181  Sum_probs=109.4

Q ss_pred             HHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHh
Q 022599          127 LNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKA  206 (294)
Q Consensus       127 ~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iika  206 (294)
                      +.|.++..++ |.-.+.+|..++.++++..++   +.+.+.++++++.+...|++....|.+...|++.+|.+....+..
T Consensus        30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~R---Pwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF  105 (292)
T COG5006          30 FAKSLFPLVG-AAGVTALRLAIAALILLALFR---PWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF  105 (292)
T ss_pred             HHHHHccccC-hhhHHHHHHHHHHHHHHHHhh---HHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence            3578887777 899999999999998776664   333467888999999999988777888888999999999999999


Q ss_pred             hhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc---ccccccHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 022599          207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL---TELSFNWTGFISAMISNISFTYRSIYSKKAMVI  277 (294)
Q Consensus       207 l~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~---~e~~fn~~G~ilallS~v~~al~~V~~Kk~l~~  277 (294)
                      +-|+.+.++    ..++..--.|  +.+.+.|+.+...   +..+.|..|..+++.+..||+.|-+..||.-+.
T Consensus       106 ~GPL~vA~~----~sRr~~d~vw--vaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~  173 (292)
T COG5006         106 TGPLAVALL----SSRRLRDFVW--VALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA  173 (292)
T ss_pred             ccHHHHHHH----hccchhhHHH--HHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc
Confidence            999976644    3344433445  4455666655432   224578999999999999999999999987643

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.12  E-value=1.3e-05  Score=74.28  Aligned_cols=64  Identities=11%  Similarity=0.125  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhhee
Q 022599          178 VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM  241 (294)
Q Consensus       178 vgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~l  241 (294)
                      .++...+++.+.+.++++.+++....+..++|++..+++++++||+++..++++..++++|+.+
T Consensus       217 ~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       217 GGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            3345667889999999999999999999999999999999999999999999999999999865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.06  E-value=6e-06  Score=73.77  Aligned_cols=107  Identities=14%  Similarity=0.074  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccc--ccc
Q 022599          171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT--ELS  248 (294)
Q Consensus       171 ~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~--e~~  248 (294)
                      ..+...|.+++.+..++.+-.+++.++.+-.+-+.+..-.|+.+++++.+|+++..-++++.++.+.|+++.++-  |..
T Consensus        52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a  131 (290)
T KOG4314|consen   52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA  131 (290)
T ss_pred             eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence            345677888899999999999999999999999999999999999999999999999999999999999998864  455


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 022599          249 FNWTGFISAMISNISFTYRSIYSKKAMVI  277 (294)
Q Consensus       249 fn~~G~ilallS~v~~al~~V~~Kk~l~~  277 (294)
                      -++.|+..++.|.+..++|.|..|....+
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGn  160 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGN  160 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            67999999999999999999999987653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.04  E-value=3.7e-05  Score=71.77  Aligned_cols=124  Identities=10%  Similarity=0.023  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHhc--cCCcHHHHHHHHHHHHHHHHHHHHH-hcCCCCCCCCh---------HH-HHHHHHHHH-HHHHH
Q 022599          120 LNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRAPIDS---------KL-LKLLIPVAV-CHALG  185 (294)
Q Consensus       120 ~si~~~i~NK~vL~--~fp~Pl~Lt~~q~~~~~lllli~~~-~g~~~~~~ls~---------~~-~~~llpvgl-~~~l~  185 (294)
                      +...++++.|+..+  +.+ |+.++.+++.++.+.+.+... .+..+....+.         .. +...+..++ ++...
T Consensus       156 ~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (302)
T TIGR00817       156 TFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFY  234 (302)
T ss_pred             HHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Confidence            33445677888877  554 888999999888877655432 22111000000         00 111112222 23333


Q ss_pred             HHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          186 HVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       186 ~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      +.+.+.++++++...+.++-.++|+++++++++++||+++..++++..++++|+.+...
T Consensus       235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            45666899999999999999999999999999999999999999999999999988754

specificities overlap.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.03  E-value=5.2e-06  Score=77.29  Aligned_cols=145  Identities=14%  Similarity=0.163  Sum_probs=105.3

Q ss_pred             HHHHhccCC-cHHHHHHHHHHHHHHHHHHHHH-hcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcc-cchhHHHHH
Q 022599          128 NKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWA-VGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTHTI  204 (294)
Q Consensus       128 NK~vL~~fp-~Pl~Lt~~q~~~~~lllli~~~-~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~-vsvs~~~ii  204 (294)
                      -..+.++.| .-..+|+.||++-.+--++... .... +++++.++   .+.+..+|...++++|.++++ +|++.+-++
T Consensus        22 lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~-k~kiplk~---Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIf   97 (330)
T KOG1583|consen   22 LELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTV-KPKIPLKD---YAITVAMFFIVNVTNNYALKFNIPMPLHIIF   97 (330)
T ss_pred             HHHHHHhCCCCeeehHHHHHHHHHHhceeeecccccc-CCCCchhh---hheehheeeeeeeeccceeeecccceEEEEE
Confidence            455666555 3377888898876664443321 1111 23444433   444555566678899999998 899999999


Q ss_pred             HhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc---ccc--------------ccc--HHHHHHHHHHHHHHH
Q 022599          205 KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL---TEL--------------SFN--WTGFISAMISNISFT  265 (294)
Q Consensus       205 kal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~---~e~--------------~fn--~~G~ilallS~v~~a  265 (294)
                      |+..++.+++++++++|++++.+++.+++++.+|++++..   .|.              ++-  ..|+.+...+.+..+
T Consensus        98 Rsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa  177 (330)
T KOG1583|consen   98 RSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSA  177 (330)
T ss_pred             ecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999753   111              111  268888888888888


Q ss_pred             HHHHHHhhhcc
Q 022599          266 YRSIYSKKAMV  276 (294)
Q Consensus       266 l~~V~~Kk~l~  276 (294)
                      .-.+|++...+
T Consensus       178 ~mgiyqE~~Y~  188 (330)
T KOG1583|consen  178 YMGIYQETTYQ  188 (330)
T ss_pred             HHHHHHHHHHH
Confidence            88888765443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.99  E-value=0.00022  Score=66.64  Aligned_cols=69  Identities=9%  Similarity=0.096  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       175 llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      ++..++...+.+.+.+.++++.+.+..+.+..++|++..++++++++|+++..+++++.+++.|+.+..
T Consensus       216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            444455666788999999999999999999999999999999999999999999999999988876653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.98  E-value=0.00045  Score=57.53  Aligned_cols=128  Identities=13%  Similarity=0.134  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHHHhcc------CCcHHHHHHHHHHHHHHHHHHHHH-hcCCCCC---------CC--ChHHHHHHHH
Q 022599          116 MWYFLNVIFNILNKRIYNY------FPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRA---------PI--DSKLLKLLIP  177 (294)
Q Consensus       116 ~w~~~si~~~i~NK~vL~~------fp~Pl~Lt~~q~~~~~lllli~~~-~g~~~~~---------~l--s~~~~~~llp  177 (294)
                      .--.+....+++.|+.+++      -..|+.+.......+.+.+.+.+. .+.++..         +.  +.+.+..++.
T Consensus         7 ~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (153)
T PF03151_consen    7 ASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLIL   86 (153)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHH
Confidence            3344555566777888776      225788877766677766655443 2222100         01  2233445555


Q ss_pred             HHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          178 VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       178 vgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      .+++....+..+.+.+++++.-.++++...-.+++.+++.++++|+++..+++++++.++|+.+.+
T Consensus        87 ~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   87 SGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            667777888999999999999999999999999999999999999999999999999999988764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.84  E-value=0.00095  Score=60.20  Aligned_cols=118  Identities=28%  Similarity=0.381  Sum_probs=86.8

Q ss_pred             HHHHHHHHhccCCcHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHhhcccchhHH
Q 022599          124 FNILNKRIYNYFPYPYFVSV-IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFT  201 (294)
Q Consensus       124 ~~i~NK~vL~~fp~Pl~Lt~-~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~-l~~~~~n~sl~~vsvs~~  201 (294)
                      +++.+|++. +.+ +..... +++............ .... .+.+.+++..+...+++.. +++.+.+.+++..+++..
T Consensus       169 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~  244 (292)
T COG0697         169 YTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV  244 (292)
T ss_pred             HHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence            446677777 333 544444 555522222222222 2111 2445667878888887766 588999999999999999


Q ss_pred             HHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccc
Q 022599          202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT  245 (294)
Q Consensus       202 ~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~  245 (294)
                      .++..++|++..++++++++|+++..++++.++++.|+.+....
T Consensus       245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999887543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.74  E-value=0.0016  Score=61.15  Aligned_cols=150  Identities=17%  Similarity=0.206  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHH--hcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHh
Q 022599          115 FMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA--VGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVS  192 (294)
Q Consensus       115 ~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~--~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~s  192 (294)
                      ..|..++... ++-|.+ +..| +..+...|.+-+..++.+...  ++.++-.. -.++.+.++.+.+  +......||.
T Consensus        14 ~Ay~lwG~lp-~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l--~a~li~~nW~   87 (293)
T COG2962          14 LAYLLWGLLP-LYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLAL--TALLIGLNWW   87 (293)
T ss_pred             HHHHHHHHHH-HHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHH--HHHHHHHHHH
Confidence            3344444433 445544 4466 888888888888776543322  11111000 1222333222221  2223344444


Q ss_pred             hcccchhHHHHH-----HhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccccccHHHHHHHHHHHHHHHHH
Q 022599          193 FAAVAVSFTHTI-----KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYR  267 (294)
Q Consensus       193 l~~vsvs~~~ii-----kal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~~fn~~G~ilallS~v~~al~  267 (294)
                      +-.-++...|++     -..+|++.++++.+|+|||+++.+++++++..+||..-.+...++.|..+.++    ++|++|
T Consensus        88 lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la----~sf~~Y  163 (293)
T COG2962          88 LFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALA----LSFGLY  163 (293)
T ss_pred             HhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH----HHHHHH
Confidence            444444444444     34589999999999999999999999999999999998777777888766554    678888


Q ss_pred             HHHHhhh
Q 022599          268 SIYSKKA  274 (294)
Q Consensus       268 ~V~~Kk~  274 (294)
                      ...-|+.
T Consensus       164 gl~RK~~  170 (293)
T COG2962         164 GLLRKKL  170 (293)
T ss_pred             HHHHHhc
Confidence            8877764

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.65  E-value=0.0012  Score=63.60  Aligned_cols=125  Identities=14%  Similarity=0.088  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHhccCC------cHHHHHHHHHHHHHHHHHHHHH-hcCCC-C-------CCCChHHHHHH----HHHH
Q 022599          119 FLNVIFNILNKRIYNYFP------YPYFVSVIHLLVGVVYCLVSWA-VGLPK-R-------APIDSKLLKLL----IPVA  179 (294)
Q Consensus       119 ~~si~~~i~NK~vL~~fp------~Pl~Lt~~q~~~~~lllli~~~-~g~~~-~-------~~ls~~~~~~l----lpvg  179 (294)
                      ++...++++.|+.+++.+      .+..+..++..++.+++++... ....+ .       ...+...+..+    +.-+
T Consensus       204 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~  283 (350)
T PTZ00343        204 LGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG  283 (350)
T ss_pred             HHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence            333456688888887531      2555666667778776655433 21110 0       00111011111    1222


Q ss_pred             HHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       180 l~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      ++|.+.+.+...++++++...+++.-.+.|+++.+++++++||+++..++++.+++++|+.+.+
T Consensus       284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            3344444444469999999999999999999999999999999999999999999999998754

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.57  E-value=0.0013  Score=61.60  Aligned_cols=127  Identities=13%  Similarity=0.199  Sum_probs=87.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH---HHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH
Q 022599          107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLL---VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA  183 (294)
Q Consensus       107 ~l~~~~~i~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~~q~~---~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~  183 (294)
                      ....+....+-|..   +.+.+|+. + .+ |+..+..|..   +++.+......   +. ++.+.+.....+..|+++.
T Consensus       153 Gi~~~l~sg~~y~~---~~~~~~~~-~-~~-~~~~~~~~~~g~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~Gi~~~  222 (290)
T TIGR00776       153 GILLLLMSTIGYLV---YVVVAKAF-G-VD-GLSVLLPQAIGMVIGGIIFNLGHI---LA-KPLKKYAILLNILPGLMWG  222 (290)
T ss_pred             HHHHHHHHHHHHHH---HHHHHHHc-C-CC-cceehhHHHHHHHHHHHHHHHHHh---cc-cchHHHHHHHHHHHHHHHH
Confidence            34444444444433   33556765 2 43 7766444443   34433332221   11 1223333344455888888


Q ss_pred             HHHHHHHHhhc-ccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhH----HHHhHhhhhheecc
Q 022599          184 LGHVTSNVSFA-AVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMAS  243 (294)
Q Consensus       184 l~~~~~n~sl~-~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~----lsllliv~GV~la~  243 (294)
                      +++.+...+.+ +++++.+.++-..+|+...+.+.+++||+.+++++    ++.++++.|+.+..
T Consensus       223 ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       223 IGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            88999999999 99999999999999999999999999999999999    99999999988764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.27  E-value=0.0015  Score=54.59  Aligned_cols=71  Identities=15%  Similarity=0.149  Sum_probs=61.7

Q ss_pred             HHHHHH-HHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHH--HhcccCChhhHHHHhHhhhhheecccc
Q 022599          175 LIPVAV-CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF--ILGQQLPLTLWLSLAPVVIGVSMASLT  245 (294)
Q Consensus       175 llpvgl-~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l--~lgek~s~~~~lsllliv~GV~la~~~  245 (294)
                      ++..++ ++.++.++-+.+++.++++...-+-+..++++.+.++.  ++||++++.++++++++++|+.+....
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            445554 57788889999999999999999999999888888885  799999999999999999999987643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.27  E-value=0.0021  Score=53.16  Aligned_cols=70  Identities=16%  Similarity=0.228  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhHHHHHH-hhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       175 llpvgl~~~l~~~~~n~sl~~vsvs~~~iik-al~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      .+..-+++.++.++-..+++++|++...-+- ..--+.+++.+.+++||++++.+++++.++++|+.+...
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            3445567778888889999999999988884 678899999999999999999999999999999988754

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.03  E-value=0.01  Score=48.35  Aligned_cols=68  Identities=16%  Similarity=0.185  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhHHHHHHh-hhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheec
Q 022599          175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA  242 (294)
Q Consensus       175 llpvgl~~~l~~~~~n~sl~~vsvs~~~iika-l~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la  242 (294)
                      .+..-+++.++..+-..+++.+|++...-+=+ .--+.+++.+.+++||++++.+++++.++++|+...
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            34445567778888888999999999877754 457888999999999999999999999999998764

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.01  E-value=0.0061  Score=49.59  Aligned_cols=68  Identities=16%  Similarity=0.192  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHHhhcccchhHHHHHHh-hhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       177 pvgl~~~l~~~~~n~sl~~vsvs~~~iika-l~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      ..-+++.++..+-..+++.+|++...-+-+ ..-+.+.+.+++++||++++.+++++.++++|+++...
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            334566777788888999999999988854 57888899999999999999999999999999988744

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.99  E-value=0.0083  Score=48.46  Aligned_cols=69  Identities=16%  Similarity=0.126  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhHHHHHHh-hhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       175 llpvgl~~~l~~~~~n~sl~~vsvs~~~iika-l~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      .+..-+++..+..+-..+++.+|++...-+=+ .--+.+.+.+++++||++++.+++++.++++|++...
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            34445567778888888999999999877754 5688899999999999999999999999999998763

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.87  E-value=0.013  Score=54.78  Aligned_cols=104  Identities=22%  Similarity=0.265  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHH-hhhhHHHHHHHHHHhcccCChhhH----HHHhHhhhhheeccc
Q 022599          170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMASL  244 (294)
Q Consensus       170 ~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iik-al~Pvft~lls~l~lgek~s~~~~----lsllliv~GV~la~~  244 (294)
                      +.+..-+.-|++..++......|++++.+|.+-=+. .+.-+.+.+.+++++||.-+...+    ++++++++|+.+.++
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            566666677899999999999999999998776664 445677899999999999876653    589999999999987


Q ss_pred             cccc--------ccHHHHHHHHHHHHHHHHHHHHHhh
Q 022599          245 TELS--------FNWTGFISAMISNISFTYRSIYSKK  273 (294)
Q Consensus       245 ~e~~--------fn~~G~ilallS~v~~al~~V~~Kk  273 (294)
                      .|.+        ....|+...+++.+.+..|.+.-|.
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~  159 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA  159 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence            5432        1256999999999999999998775

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.78  E-value=0.029  Score=52.65  Aligned_cols=133  Identities=16%  Similarity=0.290  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHHHHHHHh---cCC-CCCC---CChHHHHHHHHHHHHHH
Q 022599          112 FFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAV---GLP-KRAP---IDSKLLKLLIPVAVCHA  183 (294)
Q Consensus       112 ~~i~~w~~~si~~~i~NK~vL~~fp-~Pl~Lt~~q~~~~~lllli~~~~---g~~-~~~~---ls~~~~~~llpvgl~~~  183 (294)
                      +++.++..+......+.++++++.+ .|+.+..+..+++.++..+....   +.. +..+   ..++.+..++..+++..
T Consensus       157 ~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~  236 (303)
T PF08449_consen  157 ILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGA  236 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            4455566777777788999987643 47777777667677655433321   111 1001   11224555666667777


Q ss_pred             HHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       184 l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      .+..+-+...+..+.-...++..+--+++.+++.+++++++++.+|.++++++.|..+-.+
T Consensus       237 ~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  237 LGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            7777667777888888888888888999999999999999999999999999999887654

; GO: 0055085 transmembrane transport

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=96.58  E-value=0.00017  Score=66.88  Aligned_cols=152  Identities=8%  Similarity=0.010  Sum_probs=107.1

Q ss_pred             HHHHHHHhcc-CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 022599          125 NILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT  203 (294)
Q Consensus       125 ~i~NK~vL~~-fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~i  203 (294)
                      ++.+.++-+. .+-|..-+++.+..-.++--.....+.    +.-+..|++.+.+++...-++.+-..+.||.+..-.+.
T Consensus        34 a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~l  109 (336)
T KOG2766|consen   34 AFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIML  109 (336)
T ss_pred             hhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHH
Confidence            3455565554 556766665544432222212222221    12233577778888877777777778999999999999


Q ss_pred             HHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccc-------ccc-HHHHHHHHHHHHHHHHHHHHHhhhc
Q 022599          204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------SFN-WTGFISAMISNISFTYRSIYSKKAM  275 (294)
Q Consensus       204 ikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~-------~fn-~~G~ilallS~v~~al~~V~~Kk~l  275 (294)
                      +..-..+-+++++++|++.|+.+.++.+++..++||.+.+..|.       ..| .+|.+++++++-+++..|+..+.+.
T Consensus       110 LDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflv  189 (336)
T KOG2766|consen  110 LDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLV  189 (336)
T ss_pred             HHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHH
Confidence            98887777899999999999999999999999999999876542       122 5788888888888888888776666


Q ss_pred             cccch
Q 022599          276 VIFYE  280 (294)
Q Consensus       276 ~~~~~  280 (294)
                      ++.|-
T Consensus       190 kn~d~  194 (336)
T KOG2766|consen  190 KNADR  194 (336)
T ss_pred             hcCcH
Confidence            55554

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.56  E-value=0.0097  Score=48.19  Aligned_cols=69  Identities=19%  Similarity=0.203  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccchhHHHHHHh-hhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       175 llpvgl~~~l~~~~~n~sl~~vsvs~~~iika-l~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      .+..-+++..+..+-..+++++|++...-+=+ .--+.+++.+++++||+.+..+++++.++++|++..-
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            34444567778888889999999998877744 4578899999999999999999999999999987653

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.38  E-value=0.03  Score=43.90  Aligned_cols=56  Identities=18%  Similarity=0.318  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHhhcccchhHHHHH-HhhhhHHHHHHHHHHhcccCChhhHHHHhHh
Q 022599          180 VCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPV  235 (294)
Q Consensus       180 l~~~l~~~~~n~sl~~vsvs~~~ii-kal~Pvft~lls~l~lgek~s~~~~lsllli  235 (294)
                      .++..+..+...+++++|++...-+ .....+.+.+++.+++||+++..+++++.++
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            4677888899999999999998766 4578999999999999999999999988764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.12  E-value=0.15  Score=47.43  Aligned_cols=115  Identities=25%  Similarity=0.286  Sum_probs=76.7

Q ss_pred             HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHhhcccchhHHH
Q 022599          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVSFTH  202 (294)
Q Consensus       124 ~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls~~~~~~llpvgl~~-~l~~~~~n~sl~~vsvs~~~  202 (294)
                      |++..|.+=+.-+-+-.+ ..-|.++.++.+..-... -...-.+++-...-+-++++. .+-+.+..++++..|-+.+.
T Consensus       163 YIv~G~r~g~~~~g~~g~-a~gm~vAaviv~Pig~~~-ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~  240 (292)
T COG5006         163 YIVLGQRAGRAEHGTAGV-AVGMLVAALIVLPIGAAQ-AGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG  240 (292)
T ss_pred             HHHHcchhcccCCCchHH-HHHHHHHHHHHhhhhhhh-cchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence            334455555443434444 456666666544432210 000112333333333445554 34578899999999999999


Q ss_pred             HHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhhe
Q 022599          203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS  240 (294)
Q Consensus       203 iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~  240 (294)
                      ++-+++|.+.++.++++++|.++..+|+++..++.+.+
T Consensus       241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999987765

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.00  E-value=0.27  Score=46.51  Aligned_cols=75  Identities=15%  Similarity=0.201  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       170 ~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      +.+..++..|...++-..+...+-+.+|.|...++...+|....+++.+++||.++..++.+-+++-+|+++.+.
T Consensus       209 ~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         209 SLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             hHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            345556667788888889999999999999999999999999999999999999999999998888888877653

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.85  E-value=0.28  Score=47.37  Aligned_cols=122  Identities=19%  Similarity=0.277  Sum_probs=74.4

Q ss_pred             HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHH-HhcCCCCCCC--ChHHHHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 022599          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRAPI--DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF  200 (294)
Q Consensus       124 ~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~-~~g~~~~~~l--s~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~  200 (294)
                      .+++.|+..++.|-...+ ..-=+++.++..+.. .....+-++.  +.+.+..++--+++....+.+....++..+..+
T Consensus       183 ~nV~~E~~v~~~~~~~~l-g~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~  261 (334)
T PF06027_consen  183 SNVLEEKLVKKAPRVEFL-GMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATF  261 (334)
T ss_pred             HHHHHHHhcccCCHHHHH-HHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccce
Confidence            346678888876633333 222223333332211 1221221222  333322222223333334445577788887777


Q ss_pred             HHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccccc
Q 022599          201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE  246 (294)
Q Consensus       201 ~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e  246 (294)
                      ..+=-.+..++.++++.++.|+++++..+++.+++++|+++....|
T Consensus       262 ~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  262 FNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             eehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            7777777899999999999999999999999999999999986543

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=95.83  E-value=0.12  Score=45.98  Aligned_cols=66  Identities=14%  Similarity=0.116  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhhee
Q 022599          176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM  241 (294)
Q Consensus       176 lpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~l  241 (294)
                      ..+.++..++..+.++.+++.+.....++.++.++++.+++.++++++++..++++..+++.|+.+
T Consensus       156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            344456667777888999999999999999999999999999999999999999999999999765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00803 nst UDP-galactose transporter

Probab=95.76  E-value=0.024  Score=50.60  Aligned_cols=83  Identities=19%  Similarity=0.170  Sum_probs=67.0

Q ss_pred             cchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecccccc---------------------------c
Q 022599          196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------------------------S  248 (294)
Q Consensus       196 vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e~---------------------------~  248 (294)
                      ++++.....|+..++++++....+.+++++..++++.+++..|+.....+|.                           .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            5778888899999999999999999999999999999999999875322111                           1


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 022599          249 FNWTGFISAMISNISFTYRSIYSKKAMVIF  278 (294)
Q Consensus       249 fn~~G~ilallS~v~~al~~V~~Kk~l~~~  278 (294)
                      ..+.|....+.+.++.++..+++++.+++.
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~  111 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG  111 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence            236788888888899999999998877654

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.66  E-value=0.04  Score=45.14  Aligned_cols=70  Identities=21%  Similarity=0.379  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH-HhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheec
Q 022599          172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA  242 (294)
Q Consensus       172 ~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~ii-kal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la  242 (294)
                      |+..+|..+-.+ +.+...+.+...++|.+.-+ .++.=+||++.++++.+|..+++.+++++++++|+.+.
T Consensus        42 ~~y~ipf~lNq~-GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQS-GSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            555666665444 45556778888888888877 58899999999988888888999999999999999875

Many members are annotated as potential transmembrane proteins.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=95.51  E-value=0.031  Score=53.01  Aligned_cols=70  Identities=23%  Similarity=0.338  Sum_probs=62.1

Q ss_pred             HHHHHHH-HHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          174 LLIPVAV-CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       174 ~llpvgl-~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      .....|+ ++.++...+..|+.+.|.+..+-+-+..-++.++++.+++||++++..+.+..+++.|..+..
T Consensus        51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            3455664 456788899999999999999999999999999999999999999999999999999987754

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.02  E-value=0.93  Score=38.14  Aligned_cols=116  Identities=16%  Similarity=0.131  Sum_probs=79.4

Q ss_pred             HHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 022599          125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLP-KRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT  203 (294)
Q Consensus       125 ~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~-~~~~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~i  203 (294)
                      ...|-.+-++..+|+.-+.+-+..+.+.+.+.+....+ +.....+..|+.+ .=|++......+.+++...+.++.+.+
T Consensus        17 ~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~-lGG~lG~~~V~~~~~~vp~lG~~~~~~   95 (138)
T PF04657_consen   17 AAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAY-LGGLLGVFFVLSNIILVPRLGAALTTI   95 (138)
T ss_pred             HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHh-ccHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence            35566665555569999999999999877665543222 2111221223222 245777777888888999998888776


Q ss_pred             HH-hhhhHHHHHHHHH----HhcccCChhhHHHHhHhhhhhee
Q 022599          204 IK-ALEPFFNAAASQF----ILGQQLPLTLWLSLAPVVIGVSM  241 (294)
Q Consensus       204 ik-al~Pvft~lls~l----~lgek~s~~~~lsllliv~GV~l  241 (294)
                      +- ...-+..++++.+    .-++++++.++++++++++|+.+
T Consensus        96 l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   96 LIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            64 3456667777775    35778899999999999999864

>PRK13499 rhamnose-proton symporter; Provisional

Probab=94.62  E-value=0.78  Score=44.53  Aligned_cols=102  Identities=20%  Similarity=0.218  Sum_probs=80.0

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH-HhhhhHHHHHHHHHHhcccC---C----hhhHHHHhHhhhhh
Q 022599          168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQL---P----LTLWLSLAPVVIGV  239 (294)
Q Consensus       168 s~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~ii-kal~Pvft~lls~l~lgek~---s----~~~~lsllliv~GV  239 (294)
                      +.+.+..-+.-|++..+++.+...+++++.+|...-+ -.+.-++..++..++++|-.   +    .....+++++++|+
T Consensus        69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi  148 (345)
T PRK13499         69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV  148 (345)
T ss_pred             CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence            4445555666778889999999999999999988766 45567888888888888654   2    23578899999999


Q ss_pred             eeccc----ccc--------ccc-HHHHHHHHHHHHHHHHHHH
Q 022599          240 SMASL----TEL--------SFN-WTGFISAMISNISFTYRSI  269 (294)
Q Consensus       240 ~la~~----~e~--------~fn-~~G~ilallS~v~~al~~V  269 (294)
                      ++.+.    .|.        ++| .+|+++++++.+.++.++.
T Consensus       149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence            99876    433        233 5899999999999999994

>TIGR00688 rarD rarD protein

Probab=94.28  E-value=1.5  Score=39.72  Aligned_cols=50  Identities=8%  Similarity=0.149  Sum_probs=44.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHH
Q 022599          170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI  219 (294)
Q Consensus       170 ~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~  219 (294)
                      ++|..++..+++..+++.+.+.++++++.+...++..++|++.++++.+.
T Consensus       206 ~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       206 PIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            46777777787777889999999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=94.23  E-value=1.4  Score=41.47  Aligned_cols=68  Identities=19%  Similarity=0.223  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhh----HHHHhHhhhhhee
Q 022599          174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTL----WLSLAPVVIGVSM  241 (294)
Q Consensus       174 ~llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~----~lsllliv~GV~l  241 (294)
                      +-+.-|+++.+++.+...|.+.+-+...-.+..+..+...+-+.+++||+-++++    +++++++++|.++
T Consensus       197 ~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  197 KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            3467789999999999999999999999999999999999999999999988774    4566666666543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=93.04  E-value=0.11  Score=48.95  Aligned_cols=77  Identities=13%  Similarity=0.136  Sum_probs=64.0

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheec
Q 022599          166 PIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA  242 (294)
Q Consensus       166 ~ls~~~~~~llpvgl~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la  242 (294)
                      +-.++||..+.-+|++..++..+-..++|.=-++=..+.+.+.-+|..+...+|+|+.+++..|.+++.++...+.+
T Consensus       247 P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  247 PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence            34566777778889998888888889998877777778999999999999999999999999998887776654443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.18  E-value=14  Score=31.73  Aligned_cols=118  Identities=19%  Similarity=0.182  Sum_probs=70.4

Q ss_pred             HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--hH-HHHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 022599          124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SK-LLKLLIPVAVCHALGHVTSNVSFAAVAVSF  200 (294)
Q Consensus       124 ~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli~~~~g~~~~~~ls--~~-~~~~llpvgl~~~l~~~~~n~sl~~vsvs~  200 (294)
                      .+-.|-.+-+....|+.-+.+.+.+|.+.+.+....+ .+.++.+  .+ .|+ ...-|++.......+......+-+..
T Consensus        20 Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW-~~~GG~lGa~~vt~s~~l~p~lGa~~   97 (150)
T COG3238          20 QAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWW-AWIGGLLGAIFVTSSILLAPRLGAAT   97 (150)
T ss_pred             HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchH-HHHccchhhhhhhhhHHhccchhHHH
Confidence            3456666666666799999999999888765544332 2222222  11 232 22333444444444444555555554


Q ss_pred             HHHH-HhhhhHHHHHHHHHHh----cccCChhhHHHHhHhhhhheecc
Q 022599          201 THTI-KALEPFFNAAASQFIL----GQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       201 ~~ii-kal~Pvft~lls~l~l----gek~s~~~~lsllliv~GV~la~  243 (294)
                      ++++ -+..-+.-++++.+=.    +++++..++++++++++|+.+..
T Consensus        98 t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          98 TIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            4443 4555666666665433    36789999999999999966553

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=87.82  E-value=6.4  Score=37.74  Aligned_cols=129  Identities=15%  Similarity=0.224  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHHHHHHHh-c-CCC---CCCCChHHHHHHHHHHHHHHHH
Q 022599          112 FFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAV-G-LPK---RAPIDSKLLKLLIPVAVCHALG  185 (294)
Q Consensus       112 ~~i~~w~~~si~~~i~NK~vL~~fp-~Pl~Lt~~q~~~~~lllli~~~~-g-~~~---~~~ls~~~~~~llpvgl~~~l~  185 (294)
                      .++..+.+.-...+-..+.+++++. .++.+.+.-.++..++.....+. + ..+   ..+.+++.++.++..+++.+++
T Consensus       175 ~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavG  254 (327)
T KOG1581|consen  175 LLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVG  254 (327)
T ss_pred             HHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhh
Confidence            4444555555555566777777643 23333333223333332222111 1 111   0122455678888999998887


Q ss_pred             HHHHHHhh-cccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhhee
Q 022599          186 HVTSNVSF-AAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM  241 (294)
Q Consensus       186 ~~~~n~sl-~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~l  241 (294)
                      ..+-...+ ++.|+.++ +|..+==++..+++.+..+.+.++.+|.++..+++|+.+
T Consensus       255 Q~FI~~TI~~FGslt~t-~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  255 QLFIFYTIERFGSLTFT-TIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             hheehhhHhhcccHHHH-HHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            76544444 45666665 555556788889999999999999999999888888755

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=87.46  E-value=0.54  Score=45.11  Aligned_cols=69  Identities=20%  Similarity=0.266  Sum_probs=61.3

Q ss_pred             HHHHHH-HHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          175 LIPVAV-CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       175 llpvgl-~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      +...|+ .+.++-..+..|+.+.|.++.+-+-++.-++.++++..+++|++++.-.+++++.++|-.+.+
T Consensus        66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV  135 (335)
T KOG2922|consen   66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV  135 (335)
T ss_pred             HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence            445664 467788999999999999999999999999999999999999999999999999999976654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=87.35  E-value=23  Score=32.44  Aligned_cols=121  Identities=11%  Similarity=0.068  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHH-HHHhc-CCC--CCCCChH-HHHHHHHHHHHHHHHH
Q 022599          112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVG-LPK--RAPIDSK-LLKLLIPVAVCHALGH  186 (294)
Q Consensus       112 ~~i~~w~~~si~~~i~NK~vL~~fp~Pl~Lt~~q~~~~~lllli-~~~~g-~~~--~~~ls~~-~~~~llpvgl~~~l~~  186 (294)
                      ..+++-.+++..-.+++.+++++-+.|+..--.|+.+.++.+.. ....+ ..+  +...-+. ++. ...+-+.++.+-
T Consensus       117 ~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~-~~~~i~~~a~gG  195 (244)
T PF04142_consen  117 LAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWW-VWIVIFLQAIGG  195 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchH-HHHHHHHHHHhh
Confidence            44444455666677899999997655777767787766665432 22111 111  1111011 111 223334566665


Q ss_pred             HHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHh
Q 022599          187 VTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA  233 (294)
Q Consensus       187 ~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsll  233 (294)
                      .....-++|..-=.-....+..-+++.+++.++++.+++....++..
T Consensus       196 llva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~  242 (244)
T PF04142_consen  196 LLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA  242 (244)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence            66677888887666667778889999999999999999988776644

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=85.86  E-value=2.3  Score=40.90  Aligned_cols=130  Identities=13%  Similarity=0.108  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcc----CCcHHHHHHHHHHHHHHHHH-HHHHhcCCCCC------CCChHHHHHHHHHHH
Q 022599          112 FFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCL-VSWAVGLPKRA------PIDSKLLKLLIPVAV  180 (294)
Q Consensus       112 ~~i~~w~~~si~~~i~NK~vL~~----fp~Pl~Lt~~q~~~~~llll-i~~~~g~~~~~------~ls~~~~~~llpvgl  180 (294)
                      .+...+......-+++.|.++.+    .+ ++.+..++--++.+.++ +.+.....+..      +.+.+. ...+..++
T Consensus       166 i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~sv  243 (316)
T KOG1441|consen  166 ISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LILLLNSV  243 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHHHHHHH
Confidence            44555666667778999999852    54 77776666666666666 44443222211      112222 22333345


Q ss_pred             HHHHHHHHHHHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheecc
Q 022599          181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS  243 (294)
Q Consensus       181 ~~~l~~~~~n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~  243 (294)
                      +....+....+.+..++.=.+++....-=+++...++++++++.++...++.++.++|+.+..
T Consensus       244 ~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  244 LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            555566667777888877777777666666667778888888888889999999999988765

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=82.92  E-value=9.3  Score=35.39  Aligned_cols=121  Identities=10%  Similarity=0.026  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHHHhc--cCCcHHHHHHHHHHHHHHHHHHHH-HhcCCCCC----CCChHHHHHHHHHHHHHHHHHHHH
Q 022599          117 WYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRA----PIDSKLLKLLIPVAVCHALGHVTS  189 (294)
Q Consensus       117 w~~~si~~~i~NK~vL~--~fp~Pl~Lt~~q~~~~~lllli~~-~~g~~~~~----~ls~~~~~~llpvgl~~~l~~~~~  189 (294)
                      .+..+..+.+..|+..+  +|. -..-..+..+.+..+++.+- ........    ..+.+.....++-|++.....+++
T Consensus       163 NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~s  241 (309)
T COG5070         163 NCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCS  241 (309)
T ss_pred             hhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhcc
Confidence            33444455555566544  454 22223456666665544332 22211111    233344556667778877777889


Q ss_pred             HHhhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhh
Q 022599          190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG  238 (294)
Q Consensus       190 n~sl~~vsvs~~~iikal~Pvft~lls~l~lgek~s~~~~lsllliv~G  238 (294)
                      -|+++..+...+.++.+++-.-..+.+.+++++..++..+.++++....
T Consensus       242 aWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfls  290 (309)
T COG5070         242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLS  290 (309)
T ss_pred             ceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHH
Confidence            9999999999999999999777888899999999998888886665543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	294
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.26
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.14

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.26  E-value=4.8e-06  Score=66.24  Aligned_cols=68  Identities=16%  Similarity=0.213  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHhhcccchhHHHHH-HhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccccc
Q 022599          179 AVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE  246 (294)
Q Consensus       179 gl~~~l~~~~~n~sl~~vsvs~~~ii-kal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~~e  246 (294)
                      .+++.++..+.+.+++++|++....+ ..+.|+++.+++++++||++++.+++++.++++|+.+....+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35677888889999999999999888 899999999999999999999999999999999998876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.14  E-value=4.5e-06  Score=69.22  Aligned_cols=66  Identities=17%  Similarity=0.225  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHhhcccchhHHHHH-HhhhhHHHHHHHHHHhcccCChhhHHHHhHhhhhheeccc
Q 022599          179 AVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL  244 (294)
Q Consensus       179 gl~~~l~~~~~n~sl~~vsvs~~~ii-kal~Pvft~lls~l~lgek~s~~~~lsllliv~GV~la~~  244 (294)
                      .+++.++.++.+.++++++++....+ ..+.|+++++++++++||++++.++++++++++|+.+...
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34677888999999999999998888 8999999999999999999999999999999999998754

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00